RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQGAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000183856

Ensembl transcript IDs: ENST00000361170.7, ENST00000476565.1, ENST00000491900.1, ENST00000498755.1

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAAGCTCCTCCCAGCTGGGGAAGGGGTGAGAATCCCTGGGCCTTaGCCAGTCCTGAGCTCTAGGTGTCTGCAGGGAAGCACAGTGGTG +
Preference number: 1 (lower is better)
Translates to: GKLLPAGEGVRIPGP*PVLSSRCLQGSTVV
Trigger: CACCACTGTGCTTCCCTGCAGACACCTAGAGCTCAGGACTGGGCAAGGCCCAGGGATTCTCACCCCTTCCCCAGCTGGGAGGAGCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
3UTR GCA 90 bp AAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATaGATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTT +
Preference number: 1 (lower is better)
Translates to: KVHVLPSGRKARGLS*MIKATQLDSGQGPL
Trigger: AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR GCA 90 bp GTAAGGGATGAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATaGATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTT +
Preference number: 1 (lower is better)
Translates to: VRDENPSGRKARGLS*MIKATQLDSGQGPL
Trigger: AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTCATCCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
3UTR CCA 90 bp ACAAGAGTAATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTaGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACA +
Preference number: 1 (lower is better)
Translates to: TRVMAFPGQGPCPTI*QESQGFVMHDKSHT
Trigger: TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCATTACTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR-3UTR TCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAGGCCTTGCCCAGTCCTaGGCTCTAGGTGTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAGLAQS*ALGVCR
Trigger: CCTGCAGACACCTAGAGCTCAGGACTGGGCAAGGCC...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR-3UTR TCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGGCCTTGCCCAGTCCTaGGCTCTAGGTGTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAGLAQS*ALGVCR
Trigger: CCTGCAGACACCTAGAGCTCAGGACTGGGCAAGGCC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
3UTR-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCAAGCTCCTCCCAGCTaGGGAAGGGGTGAGAATCCC +
Preference number: 2 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLQAPPS*GRGENP
Trigger: GGGATTCTCACCCCTTCCCCAGCTGGGAGGAGCTTG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
3UTR-3UTR CCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGAAGATACACTGTCTGTaGCCAGGCAGGCAAGCTCCT +
Preference number: 2 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGKIHCL*PGRQAP
Trigger: AGGAGCTTGCCTGCCTGGCCACAGACAGTGTATCTT...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR CAA 90 bp CAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTaGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: QVKVHVLPSGRKARG*SCMIKATQLDSGQG
Trigger: GCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCAGAATCCCTGGGCCTTaGCCAGTCCTGAGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLRIPGP*PVLSSR
Trigger: CCTAGAGCTCAGGACTGGGCAAGGCCCAGGGATTCT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
3UTR-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGAGAATCCCTGGGCCTTaGCCAGTCCTGAGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVRIPGP*PVLSSR
Trigger: CCTAGAGCTCAGGACTGGGCAAGGCCCAGGGATTCT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
3UTR-3UTR CCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAAGGGGTGAGAATCCCTaGGCCTTGCCCAGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTRGENP*ALPSPE
Trigger: CTCAGGACTGGGCAAGGCCCAGGGATTCTCACCCCT...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
3UTR-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAAGCTCCTCCCAGCTaGGGAAGGGGTGAGAATCCC +
Preference number: 2 (lower is better)
Translates to: ENPSGRKARGLSCMIKATQAPPS*GRGENP
Trigger: GGGATTCTCACCCCTTCCCCAGCTGGGAGGAGCTTG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
3UTR CAA 90 bp TCAGCTGTAAGGGATGAGAATCCATCTGGCAGGAAAGCCAGGGGTTaGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SAVRDENPSGRKARG*SCMIKATQLDSGQG
Trigger: GCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTCATCCCTTACAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
3UTR-3UTR TCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAAGGGAAGCACAGTGGTaGGTTAGTGTTAAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAREAQW*VSVKES
Trigger: GCTTTCTTTAACACTAACTCACCACTGTGCTTCCCT...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR-3UTR TCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGAGGGAAGCACAGTGGTaGGTTAGTGTTAAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVREAQW*VSVKES
Trigger: GCTTTCTTTAACACTAACTCACCACTGTGCTTCCCT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
3UTR-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAAGAGGTAAGAGGGGCTaGGGTAGCACCCTTTGCCTC +
Preference number: 3 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHARGKRG*GSTLCL
Trigger: GAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCT...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTAGAGGTAAGAGGGGCTaGGGTAGCACCCTTTGCCTC +
Preference number: 3 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTRGKRG*GSTLCL
Trigger: GAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
3UTR-3UTR CAA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGAGGAAAGCCAGGGGTTaGTCATGCATGATAAAAGCC +
Preference number: 3 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGRKARG*SCMIKA
Trigger: GGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR GCA 72 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATaGATGATAAAAGCCACACAGCTGGACTCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: VLPSGRKARGLS*MIKATQLDSGQ
Trigger: TTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
3UTR GCA 72 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATaGATGATAAAAGCCACACAGCTGGACTCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: ENPSGRKARGLS*MIKATQLDSGQ
Trigger: TTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
3UTR CCA 72 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTaGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAA +
Preference number: 3 (lower is better)
Translates to: MAFPGQGPCPTI*QESQGFVMHDK
Trigger: TTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGCGCAGGACGCGCCGCTaGTTCTCTGCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGRRTRR*FSASGR
Trigger: CCTGCCACTGGCAGAGAAGCAGCGGCGCGTCCTGCG...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGAGCTCCCCCTGCTGCTaGTGGAGCACTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGSSPCC*WSTASS
Trigger: GGAGCTGGCAGTGCTCCAGCAGCAGCAGGGGGAGCT...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGTGCTCCAGAAGCCACTaGCATCCCGGGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGCSRSH*HPGPPG
Trigger: CCCTGGAGGCCCGGGATGCCAGTGGCTTCTGGAGCA...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGAGTCGGGGGCCAGGTaGTCCAGGCAGGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTESGAR*SRQARM
Trigger: CATCCGGGCCTGCCTGGACCACCTGGCCCCCGACTC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACGCAGGACGCGCCGCTaGTTCTCTGCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQARRTRR*FSASGR
Trigger: CCTGCCACTGGCAGAGAAGCAGCGGCGCGTCCTGCG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCCTCCATCCAGAGGCTaGCCAGCCTGGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLPPSRG*PAWARC
Trigger: GCAGCGGGCCCAGGCTGGGCAGCCTCTGGATGGAGG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGCCACGGAGGCGGGCCTaGAGCTGGATAACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGPRRRA*SWITKP
Trigger: CGGCTTTGTTATCCAGCTCCAGGCCCGCCTCCGTGG...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACCAAGCTCCCCCTGCTaGTGCTGGAGCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAPSSPC*CWSTAS
Trigger: GCTGGCAGTGCTCCAGCAGCAGCAGGGGGAGCTTGG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCCCTCGAAGGGCCACTaGGGGGTTCCTCAACACCCG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTPSKGH*GVPQHP
Trigger: CGGGTGTTGAGGAACCCCGCAGTGGCCCTTCGAGGG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCCTCCATCCAGCGCTTaGCCTCCTCCAGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTPPSSA*PPPAGT
Trigger: TGTGCCGGCTGGAGGAGGCCAAGCGCTGGATGGAGG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGCTCCAGAAGCCACTaGCATCCCGGGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTCSRSH*HPGPPG
Trigger: CCCTGGAGGCCCGGGATGCCAGTGGCTTCTGGAGCA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGAACACCCGCTCAGTCTaGGCTGCCTTGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGNTRSV*AALPSL
Trigger: CAAGGAGGGCAAGGCAGCCCAGACTGAGCGGGTGTT...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGAGGCCTCTCGGCGGCTaGAGGCATAGTTGTACAGGC +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGRPLGG*RHSCTG
Trigger: GCCTGTACAACTATGCCTCCAGCCGCCGAGAGGCCT...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCTCTGGACCTCGGGGTaGCTCAAGGCCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLWTSG*LKACSG
Trigger: CCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGAG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGCGGTGTCGTCGCAGTaGCTCCGGTGTCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAAVSSQ*LRCLGC
Trigger: ACAGCCCAGACACCGGAGCCACTGCGACGACACCGC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGCAAGCTCCTCCCAGCTaGGGAAGGGGTGAGAATCCC +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGQAPPS*GRGENP
Trigger: GGGATTCTCACCCCTTCCCCAGCTGGGAGGAGCTTG...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGTCCGGATGGCTTTGTTaGTCCGCTGCACAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGSGWLC*SAAQRG
Trigger: TCCACGCTGTGCAGCGGATCAACAAAGCCATCCGGA...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCTCCCGGGTCAGGTaGGAGGTGTTGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDSSRVR*EVLRGQ
Trigger: CTGCCCCCTCAACACCTCTCACCTGACCCGGGAGGA...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTGAGGCGTTCATAGGCTaGCCAGCCTGGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASEAFIG*PAWARC
Trigger: GCAGCGGGCCCAGGCTGGGCAGCCTATGAACGCCTC...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGGCCAAGCTCCCCCTaGTGCTGCTGGAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLWPSSP*CCWSTA
Trigger: GGCAGTGCTCCAGCAGCAGCAGGGGGAGCTTGGCCA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGTATTGCCTCCGAGCTaGCCACATCCGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGVLPPS*PHPGPG
Trigger: GCCTGGGCCCGGATGTGGGCAGCTCGGAGGCAATAC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGAGAATCCCTGGGCCTTaGCCAGTCCTGAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGRIPGP*PVLSSR
Trigger: CCTAGAGCTCAGGACTGGGCAAGGCCCAGGGATTCT...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGCCAGGTTGGAGGGTGTaGAGATCACAGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGPGWRV*RSQQQS
Trigger: GCTCTGCTGCTGTGATCTGCACACCCTCCAACCTGG...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCCACGGAGGCGGGCCTaGAGCTGGATAACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTPRRRA*SWITKP
Trigger: CGGCTTTGTTATCCAGCTCCAGGCCCGCCTCCGTGG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGCTCTGGACCTCGGGGTaGCTCAAGGCCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVLWTSG*LKACSG
Trigger: CCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGAG...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGCGGTGTCGTCGCAGTaGCTCCGGTGTCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLAVSSQ*LRCLGC
Trigger: ACAGCCCAGACACCGGAGCCACTGCGACGACACCGC...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGCTGCTTCTCTGCCAGTaGCAGGAGGGAGTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGLLLCQ*QEGVSC
Trigger: ACAGCTCACTCCCTCCTGCCACTGGCAGAGAAGCAG...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGAGTCGGGGGCCAGGTaGTCCAGGCAGGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREESGAR*SRQARM
Trigger: CATCCGGGCCTGCCTGGACCACCTGGCCCCCGACTC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTTGCCCCCGATCTTGCTaGAGGCAGGCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASCPRSC*RQAAGG
Trigger: GCCTCCAGCTGCCTGCCTTCAGCAAGATCGGGGGCA...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGTCCTGGTTGGCTCTaGCCACTCCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHACPGWL*PLPGGS
Trigger: AGATCCGCCAGGGAGTGGTCAGAGCCAACCAGGACA...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGTCCTGGTTGGCTCTaGCCACTCCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTCPGWL*PLPGGS
Trigger: AGATCCGCCAGGGAGTGGTCAGAGCCAACCAGGACA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGCGTGCTGTAGGAGCTaGGCCACAGCCCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLACCRS*ATAPRA
Trigger: TGCCCTGGGGGCTGTGGCTCAGCTCCTACAGCACGC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGCGTGCTGTAGGAGCTaGGCCACAGCCCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREACCRS*ATAPRA
Trigger: TGCCCTGGGGGCTGTGGCTCAGCTCCTACAGCACGC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGCAGGGGGTCTTGGTaGTCAGGGGCAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTCRGSW*SGAMQS
Trigger: GGACTGCATTGCCCCTGATCACCAAGACCCCCTGCA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGGGACAGGATCTCCTTaGGGGTGTCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAGTGSP*GCPQDG
Trigger: TCCATCCTGGGGACACCCTCAAGGAGATCCTGTCCC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGGCCTTGCCCAGTCCTaGGCTCTAGGTGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLGLAQS*ALGVCR
Trigger: CCTGCAGACACCTAGAGCTCAGGACTGGGCAAGGCC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGGCCTTGCCCAGTCCTaGGCTCTAGGTGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGGLAQS*ALGVCR
Trigger: CCTGCAGACACCTAGAGCTCAGGACTGGGCAAGGCC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGAACAGCTGCATGGACTaGAGCCTCATCCACCGAGAG +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGNSCMD*SLIHRE
Trigger: CTCTCGGTGGATGAGGCTGCAGTCCATGCAGCTGTT...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGCTCTTGGTAGACGGCTaGCAGAGGCTCTCGGAGATT +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGLLVDG*QRLSEI
Trigger: AATCTCCGAGAGCCTCTGGCAGCCGTCTACCAAGAG...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTGGCCAAGCTCCCCCTaGTGCTGCTGGAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVWPSSP*CCWSTA
Trigger: GGCAGTGCTCCAGCAGCAGCAGGGGGAGCTTGGCCA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCATGGCTCACGGTGGCCTaGAGGTCATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAWLTVA*RSFQLR
Trigger: CCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCA...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGGGCAGCCAGGAGGTTaGTCCCAGATCCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLGQPGG*SQIPWK
Trigger: CTTCCAGGGGATCTGGGAGCAACCTCCTGGCTGCCC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTGGGAGATGGCTGCGCTaGCCTGTCTGGGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASGRWLR*PVWASV
Trigger: GACTGAGGCCCAGACAGGGCAGCGCAGCCATCTCCC...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGGGAGATGGCTGCGCTaGCCTGTCTGGGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVGRWLR*PVWASV
Trigger: GACTGAGGCCCAGACAGGGCAGCGCAGCCATCTCCC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTGTAAGCCAGTTGCCTaGTACCGCAGCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGCKPVA*YRSCST
Trigger: TGTGGAGCAGCTGCGGTACCAGGCAACTGGCTTACA...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCATACACTGGAGGCAGCTaGGCCTCAGGGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAYTGGS*ASGHIS
Trigger: GCTGATGTGCCCTGAGGCCCAGCTGCCTCCAGTGTA...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGCAACAGGGTACACTaGAGGCAGCTGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTCNRVH*RQLGLR
Trigger: CCTGAGGCCCAGCTGCCTCCAGTGTACCCTGTTGCA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGTCTGTGCATTGACCTaGCTCACGGTGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTVCALT*LTVACR
Trigger: CCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGAC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGCCACAAGGAGGAGATaGTACCGAGGGGCGACAGGG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGATRRR*YRGATG
Trigger: CCCTGTCGCCCCTCGGTACCATCTCCTCCTTGTGGC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTACGCTCCTCTGGCTCTaGCACCTGGCAGGCTCTATG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTTLLWL*HLAGSM
Trigger: CATAGAGCCTGCCAGGTGCCAGAGCCAGAGGAGCGT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGGGGCAATGCAGTCCTaGTGCTCCAGCAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTGAMQS*CSSNSL
Trigger: CAGGCTGTTGCTGGAGCACCAGGACTGCATTGCCCC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGGTTGCGGATGTCCTTaGCCAGCTCGTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAGCGCP*PARPLA
Trigger: GGCTAGTGGACGAGCTGGCCAAGGACATCCGCAACC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATGCCCCCGATCTTGCTaGAGGCAGGCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVACPRSC*RQAAGG
Trigger: GCCTCCAGCTGCCTGCCTTCAGCAAGATCGGGGGCA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGCCAGGGCAGGGTCTTaGAGGGCCTTGAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATARAGS*RALSKA
Trigger: AGCCTTGCTCAAGGCCCTTCAAGACCCTGCCCTGGC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATCCTCCCGGGTCAGGTaGGAGGTGTTGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVASSRVR*EVLRGQ
Trigger: CTGCCCCCTCAACACCTCTCACCTGACCCGGGAGGA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCCAGCTCCCCCACGGTaGTGTACACCATGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGPAPPR*CTPWVW
Trigger: CCAAACCCATGGTGTACATCACCGTGGGGGAGCTGG...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGGGACAGGATCTCCTTaGGGGTGTCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDGTGSP*GCPQDG
Trigger: TCCATCCTGGGGACACCCTCAAGGAGATCCTGTCCC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGGAGTGAGCTGTCAGTaGGCGGTGTCGTCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATGVSCQ*AVSSQW
Trigger: CCACTGCGACGACACCGCTCACTGACAGCTCACTCC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCAGTGGCAGGAGGGAGTaGGCTGTCAGTGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLSGRRE*AVSERC
Trigger: ACACCGCTCACTGACAGCTCACTCCCTCCTGCCACT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAGTGGCAGGAGGGAGTaGGCTGTCAGTGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDSGRRE*AVSERC
Trigger: ACACCGCTCACTGACAGCTCACTCCCTCCTGCCACT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAAGAGCACTGGGATTCTaGAAGGCAGCCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHARALGF*KAARVS
Trigger: GGACACCCTGGCTGCCTTGCAGAATCCCAGTGCTCT...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGAGCTCCCCCTGCTGCTaGTGGAGCACTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRESSPCC*WSTASS
Trigger: GGAGCTGGCAGTGCTCCAGCAGCAGCAGGGGGAGCT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGTCACCTGGGCCTTCTaGCTTTTGGCTGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTVTWAF*LLAATR
Trigger: CCTTGTGGCAGCCAAAAGGCAGAAGGCCCAGGTGAC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGGGCAGCCAGGAGGTTaGTCCCAGATCCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATGQPGG*SQIPWK
Trigger: CTTCCAGGGGATCTGGGAGCAACCTCCTGGCTGCCC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAGTATTGCCTCCGAGCTaGCCACATCCGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAVLPPS*PHPGPG
Trigger: GCCTGGGCCCGGATGTGGGCAGCTCGGAGGCAATAC...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCATATGGGAGATGGCTaGGCTGCCCTGTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGHMGDG*AALSGP
Trigger: AGGCCCAGACAGGGCAGCGCAGCCATCTCCCATATG...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGCAATGCAGTCCTGGTaGTCCAGCAACAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTAMQSW*SSNSLC
Trigger: GCACAGGCTGTTGCTGGAGCACCAGGACTGCATTGC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGCGCCGCTGCTTCTCTaGCAGTGGCAGGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLAPLLL*QWQEGV
Trigger: CACTCCCTCCTGCCACTGGCAGAGAAGCAGCGGCGC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGCGCCGCTGCTTCTCTaGCAGTGGCAGGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATAPLLL*QWQEGV
Trigger: CACTCCCTCCTGCCACTGGCAGAGAAGCAGCGGCGC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACACTGGAGGCAGCTaGGCCTCAGGGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLYTGGS*ASGHIS
Trigger: GCTGATGTGCCCTGAGGCCCAGCTGCCTCCAGTGTA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGTCTGTGCATTGACCTaGCTCACGGTGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLVCALT*LTVACR
Trigger: CCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGAC...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGGATCCCCTGTCACCTaGGCCTTCTGCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTGSPVT*AFCLLA
Trigger: AGCCAAAAGGCAGAAGGCCCAGGTGACAGGGGATCC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAAGGCGGGCCTGGAGCTaGATAACAAAGCCGACGTTG +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQARRAWS*ITKPTL
Trigger: CAACGTCGGCTTTGTTATCCAGCTCCAGGCCCGCCT...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCGGGGTGACATCATATaGGAGATGGCTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGRGDII*EMAALP
Trigger: GGGCAGCGCAGCCATCTCCCATATGATGTCACCCCG...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGGGGCAATGCAGTCCTaGTGCTCCAGCAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLGAMQS*CSSNSL
Trigger: CAGGCTGTTGCTGGAGCACCAGGACTGCATTGCCCC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTGGGCTGTACAGGCCTaGCGTCGGCTCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVWAVQA*RRLISC
Trigger: GCAGCTGATGAGCCGACGCCAGGCCTGTACAGCCCA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTAGTGGCTCCGGTGTCTaGGCTGTACAGGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASSGSGV*AVQAWR
Trigger: ACGCCAGGCCTGTACAGCCCAGACACCGGAGCCACT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGAGGGGTGAGAATCCCTaGGCCTTGCCCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGRGENP*ALPSPE
Trigger: CTCAGGACTGGGCAAGGCCCAGGGATTCTCACCCCT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGCTCCTCCCAGCTaGGGAAGGGGTGAGAATCCC +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGQAPPS*GRGENP
Trigger: GGGATTCTCACCCCTTCCCCAGCTGGGAGGAGCTTG...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACACACAGCTGGACTCTaGGCAAGGCCCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAHTAGL*ARPTLA
Trigger: GGCTAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCACACAGCTGGACTCTaGGCAAGGCCCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTHTAGL*ARPTLA
Trigger: GGCTAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGGTCTTGAAGGGCCTTaGGCAAGGCTTCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDGLEGP*ARLQGS
Trigger: AGAGCCCTGAAGCCTTGCTCAAGGCCCTTCAAGACC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGCCAGGGCAGGGTCTTaGAGGGCCTTGAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLARAGS*RALSKA
Trigger: AGCCTTGCTCAAGGCCCTTCAAGACCCTGCCCTGGC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGCCAAGAGCCATTCTCTaGGCTGTATTAGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGPRAIL*AVLVSW
Trigger: CCAGGACACTAATACAGCTCAGAGAATGGCTCTTGG...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTATCTGCGTACCACACTaGGAGGAGGGTGGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLICVPH*EEGGVH
Trigger: ATGCACCCCACCCTCCTCTCAGTGTGGTACGCAGAT...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAAGGCCTGCTCCGGGGTaGCATCATATGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATRPAPG*HHMGDG
Trigger: GCCATCTCCCATATGATGTCACCCCGGAGCAGGCCT...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGGAGTGAGCTGTCAGTaGGCGGTGTCGTCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTGVSCQ*AVSSQW
Trigger: CCACTGCGACGACACCGCTCACTGACAGCTCACTCC...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTAGCCATTTCTGGCGCTaGCCAACCCCAGGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLSHFWR*PTPGLQ
Trigger: TTGAAGCCCTGGGGTTGGTCAGCGCCAGAAATGGCT...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTCCTTCTTCCAGGTTTaGATCTCCCGCCGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLSFFQV*ISRRWA
Trigger: GGCCCAACGGCGGGAGATTCAAACCTGGAAGAAGGA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGCTTTGTTGATCCGCTaGACAGCGTGGAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTALLIR*TAWSMA
Trigger: AGCCATGCTCCACGCTGTGCAGCGGATCAACAAAGC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACCTGCTGCTGGAGCACTaGCAGCTCCAGCTGGTACAT +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDLLLEH*QLQLVH
Trigger: ATGTACCAGCTGGAGCTGGCAGTGCTCCAGCAGCAG...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACCAGGGTTCACCAGGCTaGTCCAGAAGCCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDQGSPG*SRSHWH
Trigger: ATGCCAGTGGCTTCTGGAGCAGCCTGGTGAACCCTG...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTGGCTCACGGTGGCCTaGAGGTCATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVWLTVA*RSFQLR
Trigger: CCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGTCACCTGGGCCTTCTaGCTTTTGGCTGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDVTWAF*LLAATR
Trigger: CCTTGTGGCAGCCAAAAGGCAGAAGGCCCAGGTGAC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACCGCTCAGTCTGGGCTaGCTTGCCCTCCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLPLSLG*LALLDG
Trigger: GCCATCAAGGAGGGCAAGGCAGCCCAGACTGAGCGG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGCCGCTCAGTCTGGGCTaGCTTGCCCTCCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREPLSLG*LALLDG
Trigger: GCCATCAAGGAGGGCAAGGCAGCCCAGACTGAGCGG...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGGATTTCCTCCTGGAGTaGTGTCTTGAACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGDFLLE*CLEQLE
Trigger: CTCCAGCTGTTCAAGACAGCACTCCAGGAGGAAATC...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGCCCAGAGAAGGCCTTaGCAGCCGCAGCGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREAQRRP*QPQRAV
Trigger: TACAGCACGCTGCGGCTGGCAAGGCCTTCTCTGGGC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGCCCAGAGAAGGCCTTaGCAGCCGCAGCGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATAQRRP*QPQRAV
Trigger: TACAGCACGCTGCGGCTGGCAAGGCCTTCTCTGGGC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTTCAGGACCCGTAGGTaGTGGCTCTGCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGFRTRR*WLCPEK
Trigger: CTTCTCTGGGCAGAGCCAGCACCTACGGGTCCTGAA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGGTGATCAGGGGCAATaGAGTCCTGGTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDGDQGQ*SPGAPA
Trigger: TGCTGGAGCACCAGGACTGCATTGCCCCTGATCACC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTTGCTCAGGTCCGTGTaGCCATCTGCAGCGATGCTC +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLLLRSV*PSAAML
Trigger: GAGCATCGCTGCAGATGGGCACACGGACCTGAGCAA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTTGCTCAGGTCCGTGTaGCCATCTGCAGCGATGCTC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLLRSV*PSAAML
Trigger: GAGCATCGCTGCAGATGGGCACACGGACCTGAGCAA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGGGACACTTCTAGCTTaGTCAGGTCCGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAGTLLA*SGPCAH
Trigger: ATGGGCACACGGACCTGAGCAAGCTAGAAGTGTCCC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCCAACAGCTGCTTGGTaGTCAGAAGCAGGCTACGGG +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLPTAAW*SEAGYG
Trigger: CCCGTAGCCTGCTTCTGAGCACCAAGCAGCTGTTGG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCACAGCTGCTTGTGGGCTaGTTCTTGCTCTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAQLLVG*FLLSGS
Trigger: GCTTCCAGAGAGCAAGAAGCAGCCCACAAGCAGCTG...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCGTCGGCTCATCAGCTaGTTGTGGGCTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLRRLIS*LWAASC
Trigger: GCAAGAAGCAGCCCACAAGCAGCTGATGAGCCGACG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCACTGTGCCTGTGTCTGTaGTGGTTGCGGATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHALCLCL*WLRMSL
Trigger: CAAGGACATCCGCAACCAGCACAGACACAGGCACAG...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTTCACCAGCTCTaGCTTCCGCCTGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATQLHQL*LPPVPV
Trigger: CACAGGCACAGGCGGAAGGCAGAGCTGGTGAAGCTG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTAGAATCCCTGGGCCTTaGCCAGTCCTGAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLRIPGP*PVLSSR
Trigger: CCTAGAGCTCAGGACTGGGCAAGGCCCAGGGATTCT...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGTGGCAGAGGCAGGACTaGAGATCTATGGAAATTGCC +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGWQRQD*RSMEIA
Trigger: GGCAATTTCCATAGATCTGCAGTCCTGCCTCTGCCA...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTAACAGTGGCCTAGCTTaGCCAGCAGCACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTNSGLA*PAALHS
Trigger: GGAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGAGGGTGCAAAACAGTaGCCTAGCTTGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGEGAKQ*PSLASS
Trigger: GCTGCTGGCCAAGCTAGGCCACTGTTTTGCACCCTC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGTGTCATAGATGTCCGTaGTCTCTGGGAAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGCHRCP*SLGRRS
Trigger: CGACCTTCTTCCCAGAGACCACGGACATCTATGACA...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAGCAAGAACAGCTGCATaGACTGCAGCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAARTAA*TAASST
Trigger: GGTGGATGAGGCTGCAGTCCATGCAGCTGTTCTTGC...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGATCACCCTTTGTGTTaGCTGCAGCCACACCAGCCT +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQADHPLC*LQPHQP
Trigger: AGGCTGGTGTGGCTGCAGCCAACACAAAGGGTGATC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTTGCAACAGGGTACACTaGAGGCAGCTGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASCNRVH*RQLGLR
Trigger: CCTGAGGCCCAGCTGCCTCCAGTGTACCCTGTTGCA...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCCACAAGGAGGAGATaGTACCGAGGGGCGACAGGG +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTATRRR*YRGATG
Trigger: CCCTGTCGCCCCTCGGTACCATCTCCTCCTTGTGGC...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGGGCCTTCTGCCTTTTaGCTGCCACAAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAGPSAF*LPQGGD
Trigger: ATCTCCTCCTTGTGGCAGCCAAAAGGCAGAAGGCCC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTTGGTGACAGCTGACTaGATCTCCTCCCGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGLVTAD*ISSRVR
Trigger: CCTGACCCGGGAGGAGATCCAGTCAGCTGTCACCAA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTATCCGGGCCCAGGCCTaGATCTTGATTATGGCATCC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTIRAQA*ILIMAS
Trigger: GGATGCCATAATCAAGATCCAGGCCTGGGCCCGGAT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGACACTGAGAGGAGGGTaGGGTGCATGCACTAATATC +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGTLRGG*GACTNI
Trigger: GATATTAGTGCATGCACCCCACCCTCCTCTCAGTGT...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCAGCCTCACCACTGTTaGGTTGCCTGTCACCACGTC +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLQPHHC*VACHHV
Trigger: GACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACTGCGCTGCCCTGTCTaGGCCTCAGTCTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATLRCPV*ASVWLI
Trigger: GATCAACCAGACTGAGGCCCAGACAGGGCAGCGCAG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGCTGCGCTGCCCTGTCTaGGCCTCAGTCTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVLRCPV*ASVWLI
Trigger: GATCAACCAGACTGAGGCCCAGACAGGGCAGCGCAG...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGCGGGGTGACATCATATaGGAGATGGCTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVRGDII*EMAALP
Trigger: GGGCAGCGCAGCCATCTCCCATATGATGTCACCCCG...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATCTGGCTCTGGCACCTaGCAGGCTCTATGGATGAAC +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHASGSGT*QALWMN
Trigger: GTTCATCCATAGAGCCTGCCAGGTGCCAGAGCCAGA...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCGGCCAACAGCTGCTTaGTGCTCAGAAGCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLRPTAA*CSEAGY
Trigger: GTAGCCTGCTTCTGAGCACCAAGCAGCTGTTGGCCG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCACTGCTTCTTGCTCTCTaGAAGCCGAGAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHALLLAL*KPRGTG
Trigger: TCCTGTCCCTCTCGGCTTCCAGAGAGCAAGAAGCAG...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACTGCTTCTTGCTCTCTaGAAGCCGAGAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQALLLAL*KPRGTG
Trigger: TCCTGTCCCTCTCGGCTTCCAGAGAGCAAGAAGCAG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACATGGGCTGTACAGGCCTaGCGTCGGCTCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTWAVQA*RRLISC
Trigger: GCAGCTGATGAGCCGACGCCAGGCCTGTACAGCCCA...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAAGTGGCTCCGGTGTCTaGGCTGTACAGGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLSGSGV*AVQAWR
Trigger: ACGCCAGGCCTGTACAGCCCAGACACCGGAGCCACT...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGGTTGCGGATGTCCTTaGCCAGCTCGTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVGCGCP*PARPLA
Trigger: GGCTAGTGGACGAGCTGGCCAAGGACATCCGCAACC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATCAGGCCCTGTAATGTaGCCTGCAGCTTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHASGPVM*PAASPA
Trigger: AGCTGGTGAAGCTGCAGGCCACATTACAGGGCCTGA...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTAGGGGTGAGAATCCCTaGGCCTTGCCCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASRGENP*ALPSPE
Trigger: CTCAGGACTGGGCAAGGCCCAGGGATTCTCACCCCT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGAGTCCCTGCCCAGGTTaGAGGGTGTGCAGATCACAG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGSPCPG*RVCRSQ
Trigger: CTGTGATCTGCACACCCTCCAACCTGGGCAGGGACT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCATCTCCTCAGCTGTaGGGCGTTCATAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAPSPQL*GVHRLP
Trigger: GGGCAGCCTATGAACGCCTCACAGCTGAGGAGATGG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGGTCTTGAAGGGCCTTaGGCAAGGCTTCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVGLEGP*ARLQGS
Trigger: AGAGCCCTGAAGCCTTGCTCAAGGCCCTTCAAGACC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCCTGGAGTGCTGTCTTaGACAGCTGGAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLPGVLS*TAGAGD
Trigger: ATCTCCTGCTCCAGCTGTTCAAGACAGCACTCCAGG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGGGCTGCTCCACCTTTaGCTTGATTTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLGLLHL*LDFLLE
Trigger: CTCCAGGAGGAAATCAAGTCAAAGGTGGAGCAGCCC...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGGTCTGTGTGGACGCTaGGCACTTTGTCTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTGLCGR*ALCLLA
Trigger: TGCTAGAAGACAAAGTGCTCAGCGTCCACACAGACC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGAGGCCTGCTCCGGGGTaGCATCATATGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRERPAPG*HHMGDG
Trigger: GCCATCTCCCATATGATGTCACCCCGGAGCAGGCCT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACCAGCTCCCCCACGGTaGTGTACACCATGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLPAPPR*CTPWVW
Trigger: CCAAACCCATGGTGTACATCACCGTGGGGGAGCTGG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATGCAGGGGGTCTTGGTaGTCAGGGGCAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVACRGSW*SGAMQS
Trigger: GGACTGCATTGCCCCTGATCACCAAGACCCCCTGCA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGATGGCAAGAACAGCTaGATGGACTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTDGKNS*MDCSLI
Trigger: GATGAGGCTGCAGTCCATGCAGCTGTTCTTGCCATC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCTCTTGGTAGACGGCTaGCAGAGGCTCTCGGAGATT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLLLVDG*QRLSEI
Trigger: AATCTCCGAGAGCCTCTGGCAGCCGTCTACCAAGAG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTAGCTCCTGTGCCTTCTaGTCTCTGTCTGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTSSCAF*SLSEFS
Trigger: GCTGAACTCAGACAGAGAGCAGAAGGCACAGGAGCT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACTGCTGCTGGAGCACTaGCAGCTCCAGCTGGTACAT +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATLLLEH*QLQLVH
Trigger: ATGTACCAGCTGGAGCTGGCAGTGCTCCAGCAGCAG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCTCTTCCTGGGTCTGTaGATTGACCTGGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLFLGL*IDLAHG
Trigger: ACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAATTGATGAGGCTGACTaGAAGGACCCGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAIDEAD*KDPVSL
Trigger: GAGACTGACCGGGTCCTTGCAGTCAGCCTCATCAAT...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGCTCAGAAAGTGGGAATaGTCAGCAAACTTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGLRKWE*SANFCR
Trigger: TCGGCAGAAGTTTGCTGAGCATTCCCACTTTCTGAG...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCTGGATCTTGATGACTaGTGGGAGCCAGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGLDLDD*WEPGPQ
Trigger: CTGAGGACCTGGCTCCCAGCAGTCATCAAGATCCAG...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGAGACGCCTCAGGTATTaGCTCCGAGCTGCCCACATC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVRRLRY*LRAAHI
Trigger: GATGTGGGCAGCTCGGAGGCAATACCTGAGGCGTCT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGAGCTTCAGCAGCTCTaGCTCAGCCAAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTELQQL*LSQEVL
Trigger: CAAGACTTCTTGGCTGAGGCAGAGCTGCTGAAGCTC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTCACCACTGTTGGGTTaGCTGTCACCACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVSPLLG*LSPRPG
Trigger: CCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACATATGGGAGATGGCTaGGCTGCCCTGTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLHMGDG*AALSGP
Trigger: AGGCCCAGACAGGGCAGCGCAGCCATCTCCCATATG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTGGGTGGCTCAAGGCCTaGTCCGGGGTGACATCATAT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASGWLKA*SGVTSY
Trigger: ATATGATGTCACCCCGGAGCAGGCCTTGAGCCACCC...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTTCAGGACCCGTAGGTaGTGGCTCTGCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVFRTRR*WLCPEK
Trigger: CTTCTCTGGGCAGAGCCAGCACCTACGGGTCCTGAA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGGGACACTTCTAGCTTaGTCAGGTCCGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLGTLLA*SGPCAH
Trigger: ATGGGCACACGGACCTGAGCAAGCTAGAAGTGTCCC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTTGTGGGCTGCTTCTTaGTCTCTGGAAGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGLWAAS*SLEAER
Trigger: CCTCTCGGCTTCCAGAGAGCAAGAAGCAGCCCACAA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTGTGTCTGTGCTGGTTaGGGATGTCCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGCVCAG*GCPWPA
Trigger: AGCTGGCCAAGGACATCCGCAACCAGCACAGACACA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACCTGTGCCTGTGTCTGTaGTGGTTGCGGATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDLCLCL*WLRMSL
Trigger: CAAGGACATCCGCAACCAGCACAGACACAGGCACAG...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTTCACCAGCTCTaGCTTCCGCCTGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATQLHQL*LPPVPV
Trigger: CACAGGCACAGGCGGAAGGCAGAGCTGGTGAAGCTG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGGCCAGGGGTTTGTCATaGATGATAAAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGARGLS*MIKATQ
Trigger: CTGTGTGGCTTTTATCATGCATGACAAACCCCTGGC...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGAGGGTGCAAAACAGTaGCCTAGCTTGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVEGAKQ*PSLASS
Trigger: GCTGCTGGCCAAGCTAGGCCACTGTTTTGCACCCTC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTGTAAGCCAGTTGCCTaGTACCGCAGCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDCKPVA*YRSCST
Trigger: TGTGGAGCAGCTGCGGTACCAGGCAACTGGCTTACA...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGATGTCCGTGGTCTCTaGGAAGAAGGTCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLDVRGL*EEGRRQ
Trigger: CTGCCTTCGACCTTCTTCCCAGAGACCACGGACATC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGATGTCCGTGGTCTCTaGGAAGAAGGTCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGDVRGL*EEGRRQ
Trigger: CTGCCTTCGACCTTCTTCCCAGAGACCACGGACATC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACCTGAAGGCAGGCAGCTaGAGGCCATATTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDLKAGS*RPYLAS
Trigger: ACTGGCCAAATATGGCCTCCAGCTGCCTGCCTTCAG...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAGCTCTGACCACTCCCTaGCGGATCTCCTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAALTTP*RISSSH
Trigger: GTGGCTTGAGGAGATCCGCCAGGGAGTGGTCAGAGC...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTCTGACCACTCCCTaGCGGATCTCCTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTALTTP*RISSSH
Trigger: GTGGCTTGAGGAGATCCGCCAGGGAGTGGTCAGAGC...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAAACACCCGCTCAGTCTaGGCTGCCTTGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATNTRSV*AALPSL
Trigger: CAAGGAGGGCAAGGCAGCCCAGACTGAGCGGGTGTT...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACTCGCTGGTAGCCGTTaGCACAGTCGGGAACTACCC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLLAGSR*HSRELP
Trigger: GGGTAGTTCCCGACTGTGCCAACGGCTACCAGCGAG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCTAACTACCTCTTCCTaGAGCTTCAGCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTLTTSS*SFSSSA
Trigger: GGCAGAGCTGCTGAAGCTCCAGGAAGAGGTAGTTAG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTGTCAGCTTCTTGCAGTaGGAGACCACTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTVSFLQ*ETTSCR
Trigger: TCTGCAGGAAGTGGTCTCCCACTGCAAGAAGCTGAC...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAAGGCCTCTCGGCGGCTaGAGGCATAGTTGTACAGGC +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATRPLGG*RHSCTG
Trigger: GCCTGTACAACTATGCCTCCAGCCGCCGAGAGGCCT...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACCTGTCACCACGTCCTaGGGCTGCTCCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLPVTTS*GCSTFD
Trigger: GTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACCTGTCACCACGTCCTaGGGCTGCTCCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATPVTTS*GCSTFD
Trigger: GTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCCTCACCACTGTTaGGTTGCCTGTCACCACGTC +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATQPHHC*VACHHV
Trigger: GACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTACATCATATGGGAGATaGCTGCGCTGCCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLTSYGR*LRCPVW
Trigger: CCAGACAGGGCAGCGCAGCCATCTCCCATATGATGT...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGATGTCCAGTCGTCTCTaGACCTCGGGGTGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVMSSRL*TSGWLK
Trigger: CTTGAGCCACCCCGAGGTCCAGAGACGACTGGACAT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAGGAGCCACCACAGCTaGGTTCAGGAAGCGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDRSHHS*VQEAVV
Trigger: TACTACCGCTTCCTGAACCCAGCTGTGGTGGCTCCT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGACGCTCCTCTGGCTCTaGCACCTGGCAGGCTCTATG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRETLLWL*HLAGSM
Trigger: CATAGAGCCTGCCAGGTGCCAGAGCCAGAGGAGCGT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATGCAAAACGCTCCTCTaGCTCTGGCACCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLCKTLL*LWHLAG
Trigger: GCCTGCCAGGTGCCAGAGCCAGAGGAGCGTTTTGCA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGTACACCATGGGTTTaGCCACAGCCACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHACTPWV*PQPPCL
Trigger: CAGACATGGTGGCTGTGGCCAAACCCATGGTGTACA...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGGTCCTTCAAACTTGTTaGTCAGCGTCAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGVLQTC*SASGTL
Trigger: AAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGAC...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGCAGGCTACGGGTGTTaGAGTCATCAGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLAGYGC*SHQHLP
Trigger: AGGCAGATGCTGATGACTCCAACACCCGTAGCCTGC...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAAGGGTGTCCCCAGGATaGAACTGTATGATATCGGCC +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQARVSPG*NCMISA
Trigger: GGCCGATATCATACAGTTCCATCCTGGGGACACCCT...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCTCATCAGCTGCTTGTaGGCTGCTTCTTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTLISCL*AASCSL
Trigger: CAGAGAGCAAGAAGCAGCCCACAAGCAGCTGATGAG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTTGCCTGTGTCTGTGCTaGTTGCGGATGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASCLCLC*LRMSLA
Trigger: GGCCAAGGACATCCGCAACCAGCACAGACACAGGCA...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCTTCCCAGAACTCTTaGAGTCGGGGGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAPSQNS*SRGPGG
Trigger: ACCACCTGGCCCCCGACTCCAAGAGTTCTGGGAAGG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGAGGTAAGAGGGGCTTaGGTAGCACCCTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLEVRGA*VAPFAS
Trigger: AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGAGGTAAGAGGGGCTTaGGTAGCACCCTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDEVRGA*VAPFAS
Trigger: AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCCATGTCCTACCATCTaGCAGGAAAGCCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTPCPTI*QESQGF
Trigger: AAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCTTCTGCTCTCTGTCTaGGTTCAGCTGCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLLLSV*VQLLQV
Trigger: TACCTGGAGCAGCTGAACTCAGACAGAGAGCAGAAG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAAGCATGGCTTGTTCCTaGTCACCCTTTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQASMACS*SPFVLA
Trigger: AGCCAACACAAAGGGTGATCAGGAACAAGCCATGCT...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATCCGGATGGCTTTGTTaGTCCGCTGCACAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATSGWLC*SAAQRG
Trigger: TCCACGCTGTGCAGCGGATCAACAAAGCCATCCGGA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR TCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACCCTCCTTGATGGCTTaGTTGATGGCAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATPSLMA*LMAATP
Trigger: TGGTGTGGCTGCCATCAATCAAGCCATCAAGGAGGG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCCCTCCTTGATGGCTTaGTTGATGGCAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASPSLMA*LMAATP
Trigger: TGGTGTGGCTGCCATCAATCAAGCCATCAAGGAGGG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAATCTGCGTACCACACTaGGAGGAGGGTGGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTICVPH*EEGGVH
Trigger: ATGCACCCCACCCTCCTCTCAGTGTGGTACGCAGAT...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR TCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTCCTGCTCCAGCTGCTaGTTGGATCGGATCTTCCTA +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGSCSSC*LDRIFL
Trigger: TAGGAAGATCCGATCCAATCAGCAGCTGGAGCAGGA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGGTCTGTGTGGACGCTaGGCACTTTGTCTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDGLCGR*ALCLLA
Trigger: TGCTAGAAGACAAAGTGCTCAGCGTCCACACAGACC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAAGCCATTTCTGGCGCTaGCCAACCCCAGGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATSHFWR*PTPGLQ
Trigger: TTGAAGCCCTGGGGTTGGTCAGCGCCAGAAATGGCT...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGATGGCAAGAACAGCTaGATGGACTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDDGKNS*MDCSLI
Trigger: GATGAGGCTGCAGTCCATGCAGCTGTTCTTGCCATC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCACCCCTCGCTCCACTaGTTCATTGATGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLHPSLH*FIDGKN
Trigger: GTTCTTGCCATCAATGAAGCAGTGGAGCGAGGGGTG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAAGAGCACTGGGATTCTaGAAGGCAGCCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATRALGF*KAARVS
Trigger: GGACACCCTGGCTGCCTTGCAGAATCCCAGTGCTCT...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCTGTCTGAGTTCAGCTaGTCCAGGTACCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLSEFS*SRYQSA
Trigger: TGCTGACTGGTACCTGGAGCAGCTGAACTCAGACAG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAGCTCCTGTGCCTTCTaGTCTCTGTCTGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDSSCAF*SLSEFS
Trigger: GCTGAACTCAGACAGAGAGCAGAAGGCACAGGAGCT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGACCCTTTGTGTTGGCTaGAGCCACACCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRETLCVG*SHTSLD
Trigger: GTCCAGGCTGGTGTGGCTGCAGCCAACACAAAGGGT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCTTTGTTGATCCGCTaGACAGCGTGGAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVALLIR*TAWSMA
Trigger: AGCCATGCTCCACGCTGTGCAGCGGATCAACAAAGC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCTCTTCCTGGGTCTGTaGATTGACCTGGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASLFLGL*IDLAHG
Trigger: ACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCATTGATGAGGCTGACTaGAAGGACCCGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLIDEAD*KDPVSL
Trigger: GAGACTGACCGGGTCCTTGCAGTCAGCCTCATCAAT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGAGTCTTCTCAGGGCTaGCTTTGTCCAGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLESSQG*LCPEPH
Trigger: ATGAGGCTCTGGACAAAGGCAGCCCTGAGAAGACTC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGGGAAGTAGTAGGCAGTaGCATCCTTCATGTCATGTT +
Preference number: 4 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGGSSRQ*HPSCHV
Trigger: AACATGACATGAAGGATGGCACTGCCTACTACTTCC...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTGCTCAGCAAACTTCTaGCGAACTAGGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDCSANF*RTRKPR
Trigger: CCGTGGCTTCCTAGTTCGGCAGAAGTTTGCTGAGCA...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGCTCAGCAAACTTCTaGCGAACTAGGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLCSANF*RTRKPR
Trigger: CCGTGGCTTCCTAGTTCGGCAGAAGTTTGCTGAGCA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCTGGATCTTGATGACTaGTGGGAGCCAGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASLDLDD*WEPGPQ
Trigger: CTGAGGACCTGGCTCCCAGCAGTCATCAAGATCCAG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAAGACGCCTCAGGTATTaGCTCCGAGCTGCCCACATC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLRRLRY*LRAAHI
Trigger: GATGTGGGCAGCTCGGAGGCAATACCTGAGGCGTCT...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGAGCTTCAGCAGCTCTaGCTCAGCCAAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLELQQL*LSQEVL
Trigger: CAAGACTTCTTGGCTGAGGCAGAGCTGCTGAAGCTC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATCTTGGTCAGCTTCTTaGAGTGGGAGACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHASWSAS*SGRPLP
Trigger: AGGAAGTGGTCTCCCACTGCAAGAAGCTGACCAAGA...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATCACCACTGTTGGGTTaGCTGTCACCACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLSPLLG*LSPRPG
Trigger: CCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCAATGCAGTCCTGGTaGTCCAGCAACAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTAMQSW*SSNSLC
Trigger: GCACAGGCTGTTGCTGGAGCACCAGGACTGCATTGC...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGGTGATCAGGGGCAATaGAGTCCTGGTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREGDQGQ*SPGAPA
Trigger: TGCTGGAGCACCAGGACTGCATTGCCCCTGATCACC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTGTCCGTGTGCCCATCTaGAGCGATGCTCTCACCAAT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASVRVPI*SDALTN
Trigger: ATTGGTGAGAGCATCGCTGCAGATGGGCACACGGAC...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACATATCGGCCAACAGCTaGTTGGTGCTCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDISANS*LVLRSR
Trigger: CCTGCTTCTGAGCACCAAGCAGCTGTTGGCCGATAT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATTGTGGGCTGCTTCTTaGTCTCTGGAAGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATLWAAS*SLEAER
Trigger: CCTCTCGGCTTCCAGAGAGCAAGAAGCAGCCCACAA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACGTCGGCTCATCAGCTaGTTGTGGGCTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLRRLIS*LWAASC
Trigger: GCAAGAAGCAGCCCACAAGCAGCTGATGAGCCGACG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGCTGGAGGCCATATTTaGCCAGTTCGGACGCCATGT +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATAGGHI*PVRTPC
Trigger: ACATGGCGTCCGAACTGGCCAAATATGGCCTCCAGC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTCCAGAAGAGCACTaGGATTCTGCAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDSPEEH*DSARQP
Trigger: TGGCTGCCTTGCAGAATCCCAGTGCTCTTCTGGAGA...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGATCACCCTTTGTGTTaGCTGCAGCCACACCAGCCT +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATDHPLC*LQPHQP
Trigger: AGGCTGGTGTGGCTGCAGCCAACACAAAGGGTGATC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCACAGCGTGGAGCATaGCTTGTTCCTGATCACCCT +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVAQRGA*LVPDHP
Trigger: AGGGTGATCAGGAACAAGCCATGCTCCACGCTGTGC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTGGGCCTTCTGCCTTTTaGCTGCCACAAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASGPSAF*LPQGGD
Trigger: ATCTCCTCCTTGTGGCAGCCAAAAGGCAGAAGGCCC...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGGATCCCCTGTCACCTaGGCCTTCTGCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATGSPVT*AFCLLA
Trigger: AGCCAAAAGGCAGAAGGCCCAGGTGACAGGGGATCC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATTGGTGACAGCTGACTaGATCTCCTCCCGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLLVTAD*ISSRVR
Trigger: CCTGACCCGGGAGGAGATCCAGTCAGCTGTCACCAA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGAGGCGGGCCTGGAGCTaGATAACAAAGCCGACGTTG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRERRAWS*ITKPTL
Trigger: CAACGTCGGCTTTGTTATCCAGCTCCAGGCCCGCCT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTACATCATATGGGAGATaGCTGCGCTGCCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASTSYGR*LRCPVW
Trigger: CCAGACAGGGCAGCGCAGCCATCTCCCATATGATGT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGATGTCCAGTCGTCTCTaGACCTCGGGGTGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREMSSRL*TSGWLK
Trigger: CTTGAGCCACCCCGAGGTCCAGAGACGACTGGACAT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGGAACTTATCAGTCATaGCGAGGAGGTTGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLGTYQS*RGGCVG
Trigger: CCCTACGCAACCTCCTCGCCATGACTGATAAGTTCC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAGACCTCGCTGTCTGTaGCGTCAGGGAATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDRPRCL*RQGISL
Trigger: CAGAGAAATTCCCTGACGCCACAGACAGCGAGGTCT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACGGCCAACAGCTGCTTaGTGCTCAGAAGCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLRPTAA*CSEAGY
Trigger: GTAGCCTGCTTCTGAGCACCAAGCAGCTGTTGGCCG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGCTGCTTCTCTGCCAGTaGCAGGAGGGAGTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRELLLCQ*QEGVSC
Trigger: ACAGCTCACTCCCTCCTGCCACTGGCAGAGAAGCAG...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACATGCCTGTGTCTGTGCTaGTTGCGGATGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTCLCLC*LRMSLA
Trigger: GGCCAAGGACATCCGCAACCAGCACAGACACAGGCA...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGCCACAATGCCACATaGGCACTAACACACACTGCA +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHACHNAT*ALTHTA
Trigger: TGCAGTGTGTGTTAGTGCCCATGTGGCATTGTGGCA...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTTATAGATCATGTATCTaGGGGGCCAATCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASYRSCI*GANPSR
Trigger: CCGGCTGGGATTGGCCCCTCAGATACATGATCTATA...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTCCTGCTCCAGCTGCTaGTTGGATCGGATCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVSCSSC*LDRIFL
Trigger: TAGGAAGATCCGATCCAATCAGCAGCTGGAGCAGGA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACCACTTCCTGCAGAGTaGTCCGGTTCTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLPLPAE*SGSSPA
Trigger: TGCTGGTGAAGAACCGGATCACTCTGCAGGAAGTGG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCACTTCCTGCAGAGTaGTCCGGTTCTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAPLPAE*SGSSPA
Trigger: TGCTGGTGAAGAACCGGATCACTCTGCAGGAAGTGG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACCTGGAGTGCTGTCTTaGACAGCTGGAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLPGVLS*TAGAGD
Trigger: ATCTCCTGCTCCAGCTGTTCAAGACAGCACTCCAGG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTGCTCCACCTTTGACTTaGTTTCCTCCTGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASAPPLT*FPPGVL
Trigger: CAGCACTCCAGGAGGAAATCAAGTCAAAGGTGGAGC...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAGGGCTGCTCCACCTTTaGCTTGATTTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAGLLHL*LDFLLE
Trigger: CTCCAGGAGGAAATCAAGTCAAAGGTGGAGCAGCCC...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGGGCCTCAGTCTGGTTaGTCCAGTTCTTATAGAGGT +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGGPQSG*SSSYRG
Trigger: ACCTCTATAAGAACTGGATCAACCAGACTGAGGCCC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCAGGATGGAACTGTATaGTATCGGCCAACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLQDGTV*YRPTAA
Trigger: AGCAGCTGTTGGCCGATATCATACAGTTCCATCCTG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCAGGATGGAACTGTATaGTATCGGCCAACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLQDGTV*YRPTAA
Trigger: AGCAGCTGTTGGCCGATATCATACAGTTCCATCCTG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGTCAGCTGTAAGGGATaGGAATCCATCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGVSCKG*ESIWQE
Trigger: TTCCTGCCAGATGGATTCTCATCCCTTACAGCTGAC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAAACAGCTGCATGGACTaGAGCCTCATCCACCGAGAG +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVANSCMD*SLIHRE
Trigger: CTCTCGGTGGATGAGGCTGCAGTCCATGCAGCTGTT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGACCAAGCTCCCCCTGCTaGTGCTGGAGCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGPSSPC*CWSTAS
Trigger: GCTGGCAGTGCTCCAGCAGCAGCAGGGGGAGCTTGG...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCTTCTGCCTTTTGGCTaGCACAAGGAGGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGLLPFG*HKEEMV
Trigger: TACCATCTCCTCCTTGTGGCAGCCAAAAGGCAGAAG...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTGGACGCTGTTTCTTTaGCATGGCACTTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVWTLFL*HGTFQG
Trigger: GCCCTGGAAAGTGCCATGGCAAAGAAACAGCGTCCA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACCCAGAAAGCTGTGTCTaGTGGACGCTGTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDPESCV*WTLFLC
Trigger: GCAAAGAAACAGCGTCCAGCAGACACAGCTTTCTGG...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACCTGGCTCGGAAAAATaGCTGGATCTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAPGSEK*LDLHNG
Trigger: TCCATTGTGAAGATCCAGGCATTTTTCCGAGCCAGG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCCTGGCTCGGAAAAATaGCTGGATCTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTPGSEK*LDLHNG
Trigger: TCCATTGTGAAGATCCAGGCATTTTTCCGAGCCAGG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTCTTGGTCAGCTTCTTaGAGTGGGAGACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGSWSAS*SGRPLP
Trigger: AGGAAGTGGTCTCCCACTGCAAGAAGCTGACCAAGA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGACCACGTCCTGGGGCTaGTCCACCTTTGACTTGATT +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVTTSWG*STFDLI
Trigger: AATCAAGTCAAAGGTGGAGCAGCCCCAGGACGTGGT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGTCAGGGAATTTCTCTaGCAGAGTTGCCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDVREFL*QSCLQD
Trigger: GTCCTGAAGGCAACTCTGGCAGAGAAATTCCCTGAC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTATATCGGCCAACAGCTaGTTGGTGCTCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASISANS*LVLRSR
Trigger: CCTGCTTCTGAGCACCAAGCAGCTGTTGGCCGATAT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACAGCTGCTTGTGGGCTaGTTCTTGCTCTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLQLLVG*FLLSGS
Trigger: GCTTCCAGAGAGCAAGAAGCAGCCCACAAGCAGCTG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGTGTGTCTGTGCTGGTTaGGGATGTCCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRECVCAG*GCPWPA
Trigger: AGCTGGCCAAGGACATCCGCAACCAGCACAGACACA...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTACTTCAAACTTTCCTaGCTCATCTCCCGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTYFKLS*LISRRD
Trigger: ATCACGCCGGGAGATGAGGCAGGAAAGTTTGAAGTA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGCAACAGTGCCACAATaGCACATGGGCACTAACACA +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGATVPQ*HMGTNT
Trigger: TGTGTTAGTGCCCATGTGGCATTGTGGCACTGTTGC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGCAGAGGCAGGACTaGAGATCTATGGAAATTGCC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLWQRQD*RSMEIA
Trigger: GGCAATTTCCATAGATCTGCAGTCCTGCCTCTGCCA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAAACAGTGGCCTAGCTTaGCCAGCAGCACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVANSGLA*PAALHS
Trigger: GGAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGAAGGCAGACCGATGTaGGCTATTGCAGATAGCCAA +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLEGRPM*AIADSQ
Trigger: TTGGCTATCTGCAATAGCCCACATCGGTCTGCCTTC...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACGAAGGCAGACCGATGTaGGCTATTGCAGATAGCCAA +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDEGRPM*AIADSQ
Trigger: TTGGCTATCTGCAATAGCCCACATCGGTCTGCCTTC...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGCTGGAGGCCATATTTaGCCAGTTCGGACGCCATGT +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREAGGHI*PVRTPC
Trigger: ACATGGCGTCCGAACTGGCCAAATATGGCCTCCAGC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACTGAAGGCAGGCAGCTaGAGGCCATATTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVALKAGS*RPYLAS
Trigger: ACTGGCCAAATATGGCCTCCAGCTGCCTGCCTTCAG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGCAAGAACAGCTGCATaGACTGCAGCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLARTAA*TAASST
Trigger: GGTGGATGAGGCTGCAGTCCATGCAGCTGTTCTTGC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGTCATCATGGTTCCTaGCATTGGCTGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLCHHGS*HWLPSP
Trigger: TGGAGAAGGCAGCCAATGCCAGGAACCATGATGACA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCTTTCTCTGTCATCATaGTTCCTGGCATTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLSLSS*FLALAA
Trigger: GGCAGCCAATGCCAGGAACCATGATGACAGAGAAAG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAGCACAGCGTGGAGCATaGCTTGTTCCTGATCACCCT +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAAQRGA*LVPDHP
Trigger: AGGGTGATCAGGAACAAGCCATGCTCCACGCTGTGC...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCTGTATTAGTGTCCTaGTTGGCTCTGACCACTCCC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVAVLVS*LALTTP
Trigger: GGGAGTGGTCAGAGCCAACCAGGACACTAATACAGC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAGAAAGCTGTGTCTGCTaGACGCTGTTTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAESCVC*TLFLCH
Trigger: ATGGCAAAGAAACAGCGTCCAGCAGACACAGCTTTC...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGTGCTCCCAGATCCCCTaGAAGGTCTGCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRECSQIP*KVCRWK
Trigger: CTTCCATCTGCAGACCTTCCAGGGGATCTGGGAGCA...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATGCTCCCAGATCCCCTaGAAGGTCTGCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVACSQIP*KVCRWK
Trigger: CTTCCATCTGCAGACCTTCCAGGGGATCTGGGAGCA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACAGGTCCTCAGAAAGTaGGAATGCTCAGCAAACTTC +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAQVLRK*ECSANF
Trigger: GAAGTTTGCTGAGCATTCCCACTTTCTGAGGACCTG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAATCCGGGCCCAGGCCTaGATCTTGATTATGGCATCC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAIRAQA*ILIMAS
Trigger: GGATGCCATAATCAAGATCCAGGCCTGGGCCCGGAT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGGGTGGTTTTGTTCTGTaGCATCTGAAAGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGGGFVL*HLKDQL
Trigger: AAGCTGATCTTTCAGATGCCACAGAACAAAACCACC...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTTGGACAGGGTCTGTGTaGACGCTGAGCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASWTGSV*TLSTLS
Trigger: AGACAAAGTGCTCAGCGTCCACACAGACCCTGTCCA...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTAGACCTCGCTGTCTGTaGCGTCAGGGAATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASRPRCL*RQGISL
Trigger: CAGAGAAATTCCCTGACGCCACAGACAGCGAGGTCT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGAGGAGCCACCACAGCTaGGTTCAGGAAGCGGTAGTA +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRERSHHS*VQEAVV
Trigger: TACTACCGCTTCCTGAACCCAGCTGTGGTGGCTCCT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATCTGGCTCTGGCACCTaGCAGGCTCTATGGATGAAC +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATSGSGT*QALWMN
Trigger: GTTCATCCATAGAGCCTGCCAGGTGCCAGAGCCAGA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACTCATCAGCTGCTTGTaGGCTGCTTCTTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATLISCL*AASCSL
Trigger: CAGAGAGCAAGAAGCAGCCCACAAGCAGCTGATGAG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATCAGGCCCTGTAATGTaGCCTGCAGCTTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATSGPVM*PAASPA
Trigger: AGCTGGTGAAGCTGCAGGCCACATTACAGGGCCTGA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAAAGATACACTGTCTGTaGCCAGGCAGGCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATKIHCL*PGRQAP
Trigger: AGGAGCTTGCCTGCCTGGCCACAGACAGTGTATCTT...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGTATAGATCATGTATCTaGGGGGCCAATCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREYRSCI*GANPSR
Trigger: CCGGCTGGGATTGGCCCCTCAGATACATGATCTATA...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACTTCTGCTCTCTGTCTaGGTTCAGCTGCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVALLLSV*VQLLQV
Trigger: TACCTGGAGCAGCTGAACTCAGACAGAGAGCAGAAG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTAGCATGGCTTGTTCCTaGTCACCCTTTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASSMACS*SPFVLA
Trigger: AGCCAACACAAAGGGTGATCAGGAACAAGCCATGCT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAGCTCCACCTTTGACTTaGTTTCCTCCTGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAAPPLT*FPPGVL
Trigger: CAGCACTCCAGGAGGAAATCAAGTCAAAGGTGGAGC...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACTGTCTGAGTTCAGCTaGTCCAGGTACCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVALSEFS*SRYQSA
Trigger: TGCTGACTGGTACCTGGAGCAGCTGAACTCAGACAG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGAGTCTTCTCAGGGCTaGCTTTGTCCAGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLESSQG*LCPEPH
Trigger: ATGAGGCTCTGGACAAAGGCAGCCCTGAGAAGACTC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCTCAGAAAGTGGGAATaGTCAGCAAACTTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLRKWE*SANFCR
Trigger: TCGGCAGAAGTTTGCTGAGCATTCCCACTTTCTGAG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACCAGGCTGAAAATCACTaGCTCCATGAACTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDQAENH*LHELGG
Trigger: ACCACCAAGTTCATGGAGGCAGTGATTTTCAGCCTG...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTTTTCTCTGCCAGAGTTaGCTTCAGGACTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASFLCQS*LQDFGH
Trigger: GTGGCCAAAGTCCTGAAGGCAACTCTGGCAGAGAAA...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTACTTCAAACTTTCCTaGCTCATCTCCCGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLYFKLS*LISRRD
Trigger: ATCACGCCGGGAGATGAGGCAGGAAAGTTTGAAGTA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATCTCCAGAAGAGCACTaGGATTCTGCAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLSPEEH*DSARQP
Trigger: TGGCTGCCTTGCAGAATCCCAGTGCTCTTCTGGAGA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATGTCATCATGGTTCCTaGCATTGGCTGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATCHHGS*HWLPSP
Trigger: TGGAGAAGGCAGCCAATGCCAGGAACCATGATGACA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGACTGCCAGCTCCAGCTaGTACATAGACGATGCAACA +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVTASSS*YIDDAT
Trigger: TGTTGCATCGTCTATGTACCAGCTGGAGCTGGCAGT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGCTGTATTAGTGTCCTaGTTGGCTCTGACCACTCCC +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATAVLVS*LALTTP
Trigger: GGGAGTGGTCAGAGCCAACCAGGACACTAATACAGC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGAAAGCTGTGTCTGCTaGACGCTGTTTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLESCVC*TLFLCH
Trigger: ATGGCAAAGAAACAGCGTCCAGCAGACACAGCTTTC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGTCAGCTTCTTGCAGTaGGAGACCACTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTVSFLQ*ETTSCR
Trigger: TCTGCAGGAAGTGGTCTCCCACTGCAAGAAGCTGAC...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTCTGAAAGATCAGCTTaGCCAGGTAGATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVSERSA*PGRWAE
Trigger: CTCAGCCCATCTACCTGGCCAAGCTGATCTTTCAGA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATGGACAGGGTCTGTGTaGACGCTGAGCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLWTGSV*TLSTLS
Trigger: AGACAAAGTGCTCAGCGTCCACACAGACCCTGTCCA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGGAACTTATCAGTCATaGCGAGGAGGTTGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREGTYQS*RGGCVG
Trigger: CCCTACGCAACCTCCTCGCCATGACTGATAAGTTCC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTTGCCTTCAGGACTTTaGCCACATATCGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLLPSGL*PHIASH
Trigger: ATGGGATGCGATATGTGGCCAAAGTCCTGAAGGCAA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCACCTGGCAGGCTCTATaGATGAACTTCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLTWQAL*MNFLNL
Trigger: CAAGTTCAGGAAGTTCATCCATAGAGCCTGCCAGGT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATGTACACCATGGGTTTaGCCACAGCCACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATCTPWV*PQPPCL
Trigger: CAGACATGGTGGCTGTGGCCAAACCCATGGTGTACA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGTCCTTCAAACTTGTTaGTCAGCGTCAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLVLQTC*SASGTL
Trigger: AAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGAC...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAAAGATACACTGTCTGTaGCCAGGCAGGCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLKIHCL*PGRQAP
Trigger: AGGAGCTTGCCTGCCTGGCCACAGACAGTGTATCTT...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGATGTTGTCTGTGTaGCGGAAATGTAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTLMLSV*RKCKPV
Trigger: AACTGGCTTACATTTCCGTCACACAGACAACATCAA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACCAAGAGCCATTCTCTaGGCTGTATTAGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLPRAIL*AVLVSW
Trigger: CCAGGACACTAATACAGCTCAGAGAATGGCTCTTGG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTAAGTCTTGCTGGCTTTaGTTCAAGAGATGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTKSCWL*FKRWAN
Trigger: ATTTGCCCATCTCTTGAATCAAAGCCAGCAAGACTT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACAGAACCATCATATCTaGCAGCTGTTCCTTATTCCT +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAQNHHI*QLFLIP
Trigger: AGGAATAAGGAACAGCTGTCAGATATGATGGTTCTG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGGGCCTCAGTCTGGTTaGTCCAGTTCTTATAGAGGT +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATGPQSG*SSSYRG
Trigger: ACCTCTATAAGAACTGGATCAACCAGACTGAGGCCC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR TCA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAGGGAAGCACAGTGGTaGGTTAGTGTTAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SGRKARGLSCMIKATQLDREAQW*VSVKES
Trigger: GCTTTCTTTAACACTAACTCACCACTGTGCTTCCCT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGAGGGAAGCACAGTGGTaGGTTAGTGTTAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGREAQW*VSVKES
Trigger: GCTTTCTTTAACACTAACTCACCACTGTGCTTCCCT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGCTGGTACATAGACGATaGAACAGGGTACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRELVHRR*NRVHWR
Trigger: CCTCCAGTGTACCCTGTTGCATCGTCTATGTACCAG...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACTGGTACATAGACGATaGAACAGGGTACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATLVHRR*NRVHWR
Trigger: CCTCCAGTGTACCCTGTTGCATCGTCTATGTACCAG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACTTCTGCCTTTTGGCTaGCACAAGGAGGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATLLPFG*HKEEMV
Trigger: TACCATCTCCTCCTTGTGGCAGCCAAAAGGCAGAAG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCAGGCTGAAAATCACTaGCTCCATGAACTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASQAENH*LHELGG
Trigger: ACCACCAAGTTCATGGAGGCAGTGATTTTCAGCCTG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGATTTCCTCCTGGAGTaGTGTCTTGAACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLDFLLE*CLEQLE
Trigger: CTCCAGCTGTTCAAGACAGCACTCCAGGAGGAAATC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATTTCTCTGCCAGAGTTaGCTTCAGGACTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLFLCQS*LQDFGH
Trigger: GTGGCCAAAGTCCTGAAGGCAACTCTGGCAGAGAAA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTCAGGGAATTTCTCTaGCAGAGTTGCCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREVREFL*QSCLQD
Trigger: GTCCTGAAGGCAACTCTGGCAGAGAAATTCCCTGAC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATGTCATAGATGTCCGTaGTCTCTGGGAAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLCHRCP*SLGRRS
Trigger: CGACCTTCTTCCCAGAGACCACGGACATCTATGACA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACTTTCTCTGTCATCATaGTTCCTGGCATTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLLSLSS*FLALAA
Trigger: GGCAGCCAATGCCAGGAACCATGATGACAGAGAAAG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCCATGGACGTTGACATaGTTGATATTGCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLPWTLT*LILPWI
Trigger: AATCCAGGGCAATATCAACCATGTCAACGTCCATGG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGATCTTGATGACTGCTaGGAGCCAGGTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREDLDDC*EPGPQK
Trigger: TTTCTGAGGACCTGGCTCCCAGCAGTCATCAAGATC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGATCTTGATGACTGCTaGGAGCCAGGTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATDLDDC*EPGPQK
Trigger: TTTCTGAGGACCTGGCTCCCAGCAGTCATCAAGATC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGCTCGGAAAAATGCCTaGATCTTCACAATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQAARKNA*IFTMEL
Trigger: TAACTCCATTGTGAAGATCCAGGCATTTTTCCGAGC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGACACTGAGAGGAGGGTaGGGTGCATGCACTAATATC +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASRETLRGG*GACTNI
Trigger: GATATTAGTGCATGCACCCCACCCTCCTCTCAGTGT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATCTGAAAGATCAGCTTaGCCAGGTAGATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVASERSA*PGRWAE
Trigger: CTCAGCCCATCTACCTGGCCAAGCTGATCTTTCAGA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTCTTCTAGCACATCCTaGATAACCTTGCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLSSSTS*ITLPRI
Trigger: GATTCTGGGCAAGGTTATCCAGGATGTGCTAGAAGA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCATCCCATACGGAATTTaGTCCACAGATGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLIPYGI*STDEVM
Trigger: CATCACCTCATCTGTGGACCAAATTCCGTATGGGAT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATTGCCTTCAGGACTTTaGCCACATATCGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: VLPSGRKARGLSCMIKATLPSGL*PHIASH
Trigger: ATGGGATGCGATATGTGGCCAAAGTCCTGAAGGCAA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTACCTGGCAGGCTCTATaGATGAACTTCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASTWQAL*MNFLNL
Trigger: CAAGTTCAGGAAGTTCATCCATAGAGCCTGCCAGGT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGATGCAAAACGCTCCTCTaGCTCTGGCACCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGCKTLL*LWHLAG
Trigger: GCCTGCCAGGTGCCAGAGCCAGAGGAGCGTTTTGCA...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTTGATGTTGTCTGTGTaGCGGAAATGTAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLLMLSV*RKCKPV
Trigger: AACTGGCTTACATTTCCGTCACACAGACAACATCAA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCAAATCACTGCCTCCATaGACTTGGTGGTTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLKSLPP*TWWFCS
Trigger: AGAACAAAACCACCAAGTTCATGGAGGCAGTGATTT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAACCCTTTGTGTTGGCTaGAGCCACACCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGTLCVG*SHTSLD
Trigger: GTCCAGGCTGGTGTGGCTGCAGCCAACACAAAGGGT...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAGACTTTAAACCCTTCTaGTTGTCCAGAACCATCATA +
Preference number: 4 (lower is better)
Translates to: GKAHFSQLEDTLSVARQADFKPF*LSRTII
Trigger: TATGATGGTTCTGGACAAGCAGAAGGGTTTAAAGTC...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAGGGTGGCTCAAGGCCTaGTCCGGGGTGACATCATAT +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGGWLKA*SGVTSY
Trigger: ATATGATGTCACCCCGGAGCAGGCCTTGAGCCACCC...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGCCAGGGGTTTGTCATaGATGATAAAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATARGLS*MIKATQ
Trigger: CTGTGTGGCTTTTATCATGCATGACAAACCCCTGGC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCCATGGACGTTGACATaGTTGATATTGCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: LKKASREVRGAWVAPFASPWTLT*LILPWI
Trigger: AATCCAGGGCAATATCAACCATGTCAACGTCCATGG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGGTCCTCAGAAAGTaGGAATGCTCAGCAAACTTC +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATQVLRK*ECSANF
Trigger: GAAGTTTGCTGAGCATTCCCACTTTCTGAGGACCTG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTCTTCTAGCACATCCTaGATAACCTTGCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVSSSTS*ITLPRI
Trigger: GATTCTGGGCAAGGTTATCCAGGATGTGCTAGAAGA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGATCCCATACGGAATTTaGTCCACAGATGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVIPYGI*STDEVM
Trigger: CATCACCTCATCTGTGGACCAAATTCCGTATGGGAT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGGGAAATCAAGCCGCTaGGGCAGTGCTTGTAATATT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLGKSSR*GSACNI
Trigger: AATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACAGATAGCCAAAAGTTaGTGTTGTCTGTGTGACGGA +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAQIAKS*CCLCDG
Trigger: TCCGTCACACAGACAACATCAACTTTTGGCTATCTG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGATAGCCAAAAGTTaGTGTTGTCTGTGTGACGGA +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATQIAKS*CCLCDG
Trigger: TCCGTCACACAGACAACATCAACTTTTGGCTATCTG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR TCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGCAGAACCATCATATCTaGCAGCTGTTCCTTATTCCT +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVQNHHI*QLFLIP
Trigger: AGGAATAAGGAACAGCTGTCAGATATGATGGTTCTG...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGGAAGTAGTAGGCAGTaGCATCCTTCATGTCATGTT +
Preference number: 4 (lower is better)
Translates to: ENPSGRKARGLSCMIKATGSSRQ*HPSCHV
Trigger: AACATGACATGAAGGATGGCACTGCCTACTACTTCC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTATGGCATCCAGGTTTaGTTTAAAATACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTYGIQV*FKILQP
Trigger: TGGTTGCAGTATTTTAAAGCAAACCTGGATGCCATA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGACTTTAAACCCTTCTaGTTGTCCAGAACCATCATA +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLDFKPF*LSRTII
Trigger: TATGATGGTTCTGGACAAGCAGAAGGGTTTAAAGTC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATCTGCCGTTTCTCTTTaGTCAGCGACTTTAAACCCT +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLSAVSL*SATLNP
Trigger: AGGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACATCTGCCGTTTCTCTTTaGTCAGCGACTTTAAACCCT +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTSAVSL*SATLNP
Trigger: AGGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGA...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTATGCTTCTAGTTTCTaGCGTTTCTCTTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVYASSF*RFSLLS
Trigger: GCTGAGCAAAGAGAAACGGCAGAAACTAGAAGCATA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR GCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGATCACAGCAGCAGAGCTaGCTAGACTCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGSQQQS*LDSGRA
Trigger: TGCCCTTCCTGAGTCTAGGCAGCTCTGCTGCTGTGA...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCTCGGAAAAATGCCTaGATCTTCACAATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVARKNA*IFTMEL
Trigger: TAACTCCATTGTGAAGATCCAGGCATTTTTCCGAGC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGAAATCACTGCCTCCATaGACTTGGTGGTTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREKSLPP*TWWFCS
Trigger: AGAACAAAACCACCAAGTTCATGGAGGCAGTGATTT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCAAAGCGTTAAAACCCTaGTTAAGTCTGCACAATGAT +
Preference number: 4 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLKALKP*LSLHND
Trigger: ATCATTGTGCAGACTTAATCAGGGTTTTAACGCTTT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGGAAAGACTCCTCTTTaGTCTTATGAAGCTGAAATA +
Preference number: 4 (lower is better)
Translates to: RKARGLSCMIKATQLDSGGKTPL*SYEAEI
Trigger: TATTTCAGCTTCATAAGATCAAAGAGGAGTCTTTCC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATATGCTTCTAGTTTCTaGCGTTTCTCTTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLYASSF*RFSLLS
Trigger: GCTGAGCAAAGAGAAACGGCAGAAACTAGAAGCATA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGGTGGTTTTGTTCTGTaGCATCTGAAAGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREGGFVL*HLKDQL
Trigger: AAGCTGATCTTTCAGATGCCACAGAACAAAACCACC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCACACCCAGGAACTTaGCATTTACTTCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: GELVLKKASREVRGAWVAPHPGT*HLLQTF
Trigger: GAAAGTTTGAAGTAAATGCCAAGTTCCTGGGTGTGG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CCA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACACCACACCCAGGAACTTaGCATTTACTTCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTPHPGT*HLLQTF
Trigger: GAAAGTTTGAAGTAAATGCCAAGTTCCTGGGTGTGG...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR GCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGACCAGAAAGCTGTGTCTaGTGGACGCTGTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGPESCV*WTLFLC
Trigger: GCAAAGAAACAGCGTCCAGCAGACACAGCTTTCTGG...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAACTGCCAGCTCCAGCTaGTACATAGACGATGCAACA +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGTASSS*YIDDAT
Trigger: TGTTGCATCGTCTATGTACCAGCTGGAGCTGGCAGT...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR TCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGCATGGGTATTAGTTTaGATAGGGAAAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREAWVLV*IGKMRT
Trigger: AGTTCTCATTTTCCCTATTCAAACTAATACCCATGC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR GCA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGTATGGCATCCAGGTTTaGTTTAAAATACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: VSAGKHSGELVLKKASREYGIQV*FKILQP
Trigger: TGGTTGCAGTATTTTAAAGCAAACCTGGATGCCATA...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR TCA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAAAGTCTTGCTGGCTTTaGTTCAAGAGATGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGKSCWL*FKRWAN
Trigger: ATTTGCCCATCTCTTGAATCAAAGCCAGCAAGACTT...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS GCA 90 bp CTGGTAGCCGTTGGCACAGTCGGGAACTACCCCTCGAAGGGCCACTaGGGGGTTCCTCAACACCCGCTCAGTCTGGGCTGCCTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LVAVGTVGNYPSKGH*GVPQHPLSLGCLAL
Trigger: GAGGGCAAGGCAGCCCAGACTGAGCGGGTGTTGAGGAACCCCGCAGTGGCCCTTCGAGGGGTAGTTCCCGACTGTGCCAACGGCTACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp AGTCATTCAGGACCCGTAGGTGCTGGCTCTGCCCAGAGAAGGCCTTaGCAGCCGCAGCGTGCTGTAGGAGCTGAGCCACAGCCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: SHSGPVGAGSAQRRP*QPQRAVGAEPQPPG
Trigger: CCCTGGGGGCTGTGGCTCAGCTCCTACAGCACGCTGCGGCTGGCAAGGCCTTCTCTGGGCAGAGCCAGCACCTACGGGTCCTGAATGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 90 bp CCTTGGCCAGCTCGTCCACTAGCCCCTGGTAGCCATTTCTGGCGCTaGCCAACCCCAGGGCTTCAAGTCGGCGTAGGTTCCGCAGGACGC +
Preference number: 5 (lower is better)
Translates to: PWPARPLAPGSHFWR*PTPGLQVGVGSAGR
Trigger: GCGTCCTGCGGAACCTACGCCGACTTGAAGCCCTGGGGTTGGTCAGCGCCAGAAATGGCTACCAGGGGCTAGTGGACGAGCTGGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp GAGCGGTGTCGTCGCAGTGGCTCCGGTGTCTGGGCTGTACAGGCCTaGCGTCGGCTCATCAGCTGCTTGTGGGCTGCTTCTTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: ERCRRSGSGVWAVQA*RRLISCLWAASCSL
Trigger: CAGAGAGCAAGAAGCAGCCCACAAGCAGCTGATGAGCCGACGCCAGGCCTGTACAGCCCAGACACCGGAGCCACTGCGACGACACCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 90 bp ACTGGCATCCCGGGCCTCCAGGGCCCGGTTAATCAGGACCACAGCTaGGAGCATCTCCACAGCCACGAAGAGCTCCTCCTGGCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: TGIPGLQGPVNQDHS*EHLHSHEELLLAKL
Trigger: GAGCTTGGCCAGGAGGAGCTCTTCGTGGCTGTGGAGATGCTCTCAGCTGTGGTCCTGATTAACCGGGCCCTGGAGGCCCGGGATGCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp TGGCCAAGCTCCCCCTGCTGCTGCTGGAGCACTGCCAGCTCCAGCTaGTACATAGACGATGCAACAGGGTACACTGGAGGCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: WPSSPCCCWSTASSS*YIDDATGYTGGSWA
Trigger: GGCCCAGCTGCCTCCAGTGTACCCTGTTGCATCGTCTATGTACCAGCTGGAGCTGGCAGTGCTCCAGCAGCAGCAGGGGGAGCTTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp CATCTCCCTCCCTGCCTTCCTCCCTGCAGGACTATCACCCTGCTCTaGTCCCCATGGTGGCCTGGCCCTCTTGAAATCCCATGCGTAGGC +
Preference number: 5 (lower is better)
Translates to: HLPPCLPPCRTITLL*SPWWPGPLEIPCVG
Trigger: GCCTACGCATGGGATTTCAAGAGGGCCAGGCCACCATGGGGAGCAGAGCAGGGTGATAGTCCTGCAGGGAGGAAGGCAGGGAGGGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476565.1
CDS CCA 90 bp GGTAGACGGCTGCCAGAGGCTCTCGGAGATTCTCCAGAAGAGCACTaGGATTCTGCAAGGCAGCCAGGGTGTCCTCCACCACCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: GRRLPEALGDSPEEH*DSARQPGCPPPPLA
Trigger: AGCGAGGGGTGGTGGAGGACACCCTGGCTGCCTTGCAGAATCCCAGTGCTCTTCTGGAGAATCTCCGAGAGCCTCTGGCAGCCGTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp GCTGTTTCTTTGCCATGGCACTTTCCAGGGCTCGCTGGTAGCCGTTaGCACAGTCGGGAACTACCCCTCGAAGGGCCACTGCGGGGTTCC +
Preference number: 5 (lower is better)
Translates to: AVSLPWHFPGLAGSR*HSRELPLEGPLRGS
Trigger: GGAACCCCGCAGTGGCCCTTCGAGGGGTAGTTCCCGACTGTGCCAACGGCTACCAGCGAGCCCTGGAAAGTGCCATGGCAAAGAAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp AGGAGGTTGCGTAGGGCGATGTCCAGTCGTCTCTGGACCTCGGGGTaGCTCAAGGCCTGCTCCGGGGTGACATCATATGGGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: RRLRRAMSSRLWTSG*LKACSGVTSYGRWL
Trigger: CAGCCATCTCCCATATGATGTCACCCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGAGACGACTGGACATCGCCCTACGCAACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS CCA 90 bp CCTGTCACCTGGGCCTTCTGCCTTTTGGCTGCCACAAGGAGGAGATaGTACCGAGGGGCGACAGGGAGGCTGACATCATCTAGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PVTWAFCLLAATRRR*YRGATGRLTSSRPA
Trigger: AGCTGGCCTAGATGATGTCAGCCTCCCTGTCGCCCCTCGGTACCATCTCCTCCTTGTGGCAGCCAAAAGGCAGAAGGCCCAGGTGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp TCAGTCATGGCGAGGAGGTTGCGTAGGGCGATGTCCAGTCGTCTCTaGACCTCGGGGTGGCTCAAGGCCTGCTCCGGGGTGACATCATAT +
Preference number: 5 (lower is better)
Translates to: SVMARRLRRAMSSRL*TSGWLKACSGVTSY
Trigger: ATATGATGTCACCCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGAGACGACTGGACATCGCCCTACGCAACCTCCTCGCCATGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS GCA 90 bp CTCCTCAGCTGTGAGGCGTTCATAGGCTGCCCAGCCTGGGCCCGCTaGTCTCCTCTCCATGTTCCTCCTTCTTCCAGGTTTGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: LLSCEAFIGCPAWAR*SPLHVPPSSRFESP
Trigger: GGGAGATTCAAACCTGGAAGAAGGAGGAACATGGAGAGGAGAGCAGCGGGCCCAGGCTGGGCAGCCTATGAACGCCTCACAGCTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS GCA 90 bp TCAGTCTCTTCCTGGGTCTGTGCATTGACCTGGCTCACGGTGGCCTaGAGGTCATTCCAGCTCAGGAAGTCCTCACCCATCCCACGCTCC +
Preference number: 5 (lower is better)
Translates to: SVSSWVCALTWLTVA*RSFQLRKSSPIPRS
Trigger: GGAGCGTGGGATGGGTGAGGACTTCCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp GATGAGGCTGACTGCAAGGACCCGGTCAGTCTCTTCCTGGGTCTGTaGATTGACCTGGCTCACGGTGGCCTGCAGGTCATTCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: DEADCKDPVSLFLGL*IDLAHGGLQVIPAQ
Trigger: CTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTGCAGTCAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGAATCTCCCGCCGTaGGGCCACCGCCCCTCACCG +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTLNLPP*GHRPSP
Trigger: CGGTGAGGGGCGGTGGCCCAACGGCGGGAGATTCAA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS TCA 90 bp GCTCCTTCACAGTGTCAGCCGCCACTCTCCTCCGGATGGCTTTGTTaGTCCGCTGCACAGCGTGGAGCATGGCTTGTTCCTGATCACCCT +
Preference number: 5 (lower is better)
Translates to: APSQCQPPLSSGWLC*SAAQRGAWLVPDHP
Trigger: AGGGTGATCAGGAACAAGCCATGCTCCACGCTGTGCAGCGGATCAACAAAGCCATCCGGAGGAGAGTGGCGGCTGACACTGTGAAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp GCTGGGAGCCAGGTCCTCAGAAAGTGGGAATGCTCAGCAAACTTCTaGCGAACTAGGAAGCCACGGAGGCGGGCCTGGAGCTGGATAACA +
Preference number: 5 (lower is better)
Translates to: AGSQVLRKWECSANF*RTRKPRRRAWSWIT
Trigger: TGTTATCCAGCTCCAGGCCCGCCTCCGTGGCTTCCTAGTTCGGCAGAAGTTTGCTGAGCATTCCCACTTTCTGAGGACCTGGCTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp GCCCATTACGGTAGAATCTCACCACCAGCCTCACCACTGTTGGGTTaGCTGTCACCACGTCCTGGGGCTGCTCCACCTTTGACCTGTGGT +
Preference number: 5 (lower is better)
Translates to: AHYGRISPPASPLLG*LSPRPGAAPPLTCG
Trigger: ACCACAGGTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGGTGGTGAGATTCTACCGTAATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS CCA 90 bp TCTTCTTCAAGGGAACCACGGAGGGTGCAAAACAGTGGCCTAGCTTaGCCAGCAGCACTCCATTCCGAAGGCTCTCCTCCAGCTCCACCG +
Preference number: 5 (lower is better)
Translates to: SSSREPRRVQNSGLA*PAALHSEGSPPAPP
Trigger: CGGTGGAGCTGGAGGAGAGCCTTCGGAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTTTTGCACCCTCCGTGGTTCCCTTGAAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp ACTGCAAGGACCCGGTCAGTCTCTTCCTGGGTCTGTGCATTGACCTaGCTCACGGTGGCCTGCAGGTCATTCCAGCTCAGGAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TARTRSVSSWVCALT*LTVACRSFQLRKSS
Trigger: TGAGGACTTCCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp GCAAACTTCTGCCGAACTAGGAAGCCACGGAGGCGGGCCTGGAGCTaGATAACAAAGCCGACGTTGGCTTTCCAGAGCTGTTGGCGGTCA +
Preference number: 5 (lower is better)
Translates to: ANFCRTRKPRRRAWS*ITKPTLAFQSCWRS
Trigger: TGACCGCCAACAGCTCTGGAAAGCCAACGTCGGCTTTGTTATCCAGCTCCAGGCCCGCCTCCGTGGCTTCCTAGTTCGGCAGAAGTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp TGCTCCCCATGGTGGCCTGGCCCTCTTGAAATCCCATGCGTAGGCTaGGGTGGGGCTGTTGCACATACGGAATTTGGTCCACAGATGAGG +
Preference number: 5 (lower is better)
Translates to: CSPWWPGPLEIPCVG*GGAVAHTEFGPQMR
Trigger: CCTCATCTGTGGACCAAATTCCGTATGTGCAACAGCCCCACCCCAGCCTACGCATGGGATTTCAAGAGGGCCAGGCCACCATGGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476565.1
CDS-3UTR CAA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCATGCCCAGAGAAGGCCTaGCCAGCCGCAGCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GKAHFSQLEDTLSVARQACPEKA*PAAACC
Trigger: ACAGCACGCTGCGGCTGGCAAGGCCTTCTCTGGGCA...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp TGGATCTTGATGACTGCTGGGAGCCAGGTCCTCAGAAAGTGGGAATaGTCAGCAAACTTCTGCCGAACTAGGAAGCCACGGAGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: WILMTAGSQVLRKWE*SANFCRTRKPRRRA
Trigger: GGCCCGCCTCCGTGGCTTCCTAGTTCGGCAGAAGTTTGCTGAGCATTCCCACTTTCTGAGGACCTGGCTCCCAGCAGTCATCAAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp TGCTCAGCAAACTTCTGCCGAACTAGGAAGCCACGGAGGCGGGCCTaGAGCTGGATAACAAAGCCGACGTTGGCTTTCCAGAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: CSANFCRTRKPRRRA*SWITKPTLAFQSCW
Trigger: CCAACAGCTCTGGAAAGCCAACGTCGGCTTTGTTATCCAGCTCCAGGCCCGCCTCCGTGGCTTCCTAGTTCGGCAGAAGTTTGCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCACTGGGCCAGCATCTCTaGGTAGACGGCTGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHALGQHL*VDGCQR
Trigger: CCTCTGGCAGCCGTCTACCAAGAGATGCTGGCCCAG...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGTGGGCCTTCTGCCTTTaGGCTGCCACAAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGWAFCL*AATRRR
Trigger: TCTCCTCCTTGTGGCAGCCAAAAGGCAGAAGGCCCA...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGGGGCAGCCAGGAGGTaGCTCCCAGATCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLGAARR*LPDPLE
Trigger: TTCCAGGGGATCTGGGAGCAACCTCCTGGCTGCCCC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAAACAGCCTGTGCGTGTaGACCAGCTCCCCCACGGTG +
Preference number: 5 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHANSLCV*TSSPTV
Trigger: CACCGTGGGGGAGCTGGTCAACACGCACAGGCTGTT...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGAGCAGGCTACGGGTGTaGGAGTCATCAGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGSRLRV*ESSASA
Trigger: GGCAGATGCTGATGACTCCAACACCCGTAGCCTGCT...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS GCA 90 bp ATTCTTCTGGAAGTAGTGCAGACGCCTCAGGTATTGCCTCCGAGCTaGCCACATCCGGGCCCAGGCCTGGATCTTGATTATGGCATCCAG +
Preference number: 5 (lower is better)
Translates to: ILLEVVQTPQVLPPS*PHPGPGLDLDYGIQ
Trigger: CTGGATGCCATAATCAAGATCCAGGCCTGGGCCCGGATGTGGGCAGCTCGGAGGCAATACCTGAGGCGTCTGCACTACTTCCAGAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp CTGGAAGCCGAGAGGGACAGGATCTCCTTGAGGGTGTCCCCAGGATaGAACTGTATGATATCGGCCAACAGCTGCTTGGTGCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LEAERDRISLRVSPG*NCMISANSCLVLRS
Trigger: GCTTCTGAGCACCAAGCAGCTGTTGGCCGATATCATACAGTTCCATCCTGGGGACACCCTCAAGGAGATCCTGTCCCTCTCGGCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCACTCCTCCGGATGGCTTaGTTGATCCGCTGCACAGCG +
Preference number: 5 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHALLRMA*LIRCTA
Trigger: CGCTGTGCAGCGGATCAACAAAGCCATCCGGAGGAG...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTCCTGGGTCTGTGCATaGACCTGGCTCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGSWVCA*TWLTVA
Trigger: GGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCAGACGCCTCAGGTATaGCCTCCGAGCTGCCCACAT +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTQTPQV*PPSCPH
Trigger: ATGTGGGCAGCTCGGAGGCAATACCTGAGGCGTCTG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCCCTTCCCAGAACTCTaGGAGTCGGGGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASPFPEL*ESGARW
Trigger: CCACCTGGCCCCCGACTCCAAGAGTTCTGGGAAGGG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp TTGTTGGTCAGCGTCAGGGACACTTCTAGCTTGCTCAGGTCCGTGTaGCCATCTGCAGCGATGCTCTCACCAATAAGGTCAGGGATGGTG +
Preference number: 5 (lower is better)
Translates to: LLVSVRDTSSLLRSV*PSAAMLSPIRSGMV
Trigger: CACCATCCCTGACCTTATTGGTGAGAGCATCGCTGCAGATGGGCACACGGACCTGAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp ACCAGCCTCACCACTGTTGGGTTGCCTGTCACCACGTCCTGGGGCTaGTCCACCTTTGACCTGTGGTTTAAGAGGTCATTGAAACCAGTC +
Preference number: 5 (lower is better)
Translates to: TSLTTVGLPVTTSWG*STFDLWFKRSLKPV
Trigger: GACTGGTTTCAATGACCTCTTAAACCACAGGTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS CCA 90 bp CTCACCACCAGCCTCACCACTGTTGGGTTGCCTGTCACCACGTCCTaGGGCTGCTCCACCTTTGACCTGTGGTTTAAGAGGTCATTGAAA +
Preference number: 5 (lower is better)
Translates to: LTTSLTTVGLPVTTS*GCSTFDLWFKRSLK
Trigger: TTTCAATGACCTCTTAAACCACAGGTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGGTGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTAGCTGGAGGCCATATTaGGCCAGTTCGGACGCCATG +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTSWRPY*ASSDAM
Trigger: CATGGCGTCCGAACTGGCCAAATATGGCCTCCAGCT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATCCTGGGTCTGTGCATaGACCTGGCTCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VLPSGRKARGLSCMIKATSWVCA*TWLTVA
Trigger: GGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAGGGGCAGCCAGGAGGTaGCTCCCAGATCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLGAARR*LPDPLE
Trigger: TTCCAGGGGATCTGGGAGCAACCTCCTGGCTGCCCC...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCTCACCACTGTTGGGTaGCCTGTCACCACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLLTTVG*PVTTSW
Trigger: CCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCCAGCCTCACCACTGTaGGGTTGCCTGTCACCACGT +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGPASPL*GCLSPR
Trigger: ACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGG...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCCAGCCTCACCACTGTaGGGTTGCCTGTCACCACGT +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLPASPL*GCLSPR
Trigger: ACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATGCCCAGAGAAGGCCTaGCCAGCCGCAGCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLCPEKA*PAAACC
Trigger: ACAGCACGCTGCGGCTGGCAAGGCCTTCTCTGGGCA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTAACAGCCTGTGCGTGTaGACCAGCTCCCCCACGGTG +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASNSLCV*TSSPTV
Trigger: CACCGTGGGGGAGCTGGTCAACACGCACAGGCTGTT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCAGGGACAGGATCTCCTaGAGGGTGTCCCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLRDRIS*RVSPGW
Trigger: CCATCCTGGGGACACCCTCAAGGAGATCCTGTCCCT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCACTTGTGGGCTGCTTCTaGCTCTCTGGAAGCCGAGAG +
Preference number: 5 (lower is better)
Translates to: GKAHFSQLEDTLSVARQALVGCF*LSGSRE
Trigger: CTCTCGGCTTCCAGAGAGCAAGAAGCAGCCCACAAG...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCGGCTCATCAGCTGCTaGTGGGCTGCTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTRLISC*WAASCS
Trigger: AGAGCAAGAAGCAGCCCACAAGCAGCTGATGAGCCG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGGTTGCGGATGTCCTaGGCCAGCTCGTCCACTAGC +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLWLRMS*ASSSTS
Trigger: GCTAGTGGACGAGCTGGCCAAGGACATCCGCAACCA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGTTGCGGATGTCCTaGGCCAGCTCGTCCACTAGC +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLWLRMS*ASSSTS
Trigger: GCTAGTGGACGAGCTGGCCAAGGACATCCGCAACCA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCTGTGTCTGTGCTGGTaGCGGATGTCCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLLCLCW*RMSLAS
Trigger: GCTGGCCAAGGACATCCGCAACCAGCACAGACACAG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACCCTTCCCAGAACTCTaGGAGTCGGGGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLPFPEL*ESGARW
Trigger: CCACCTGGCCCCCGACTCCAAGAGTTCTGGGAAGGG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCAGTCCCTGCCCAGGTaGGAGGGTGTGCAGATCACA +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLQSLPR*EGVQIT
Trigger: TGTGATCTGCACACCCTCCAACCTGGGCAGGGACTG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS CCA 90 bp GGGTGTTGGAGTCATCAGCATCTGCCTCTAGTCCTTCAAACTTGTTaGTCAGCGTCAGGGACACTTCTAGCTTGCTCAGGTCCGTGTGCC +
Preference number: 5 (lower is better)
Translates to: GCWSHQHLPLVLQTC*SASGTLLACSGPCA
Trigger: GGCACACGGACCTGAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGAGGCAGATGCTGATGACTCCAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 90 bp GGGTTGCCTGTCACCACGTCCTGGGGCTGCTCCACCTTTGACCTGTaGTTTAAGAGGTCATTGAAACCAGTCTTCTGCCTCTGTGTAGGA +
Preference number: 5 (lower is better)
Translates to: GLPVTTSWGCSTFDL*FKRSLKPVFCLCVG
Trigger: TCCTACACAGAGGCAGAAGACTGGTTTCAATGACCTCTTAAACCACAGGTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAGGAAATGTAAGCCAGTaGCCTGGTACCGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAGNVSQ*PGTAAA
Trigger: AGCAGCTGCGGTACCAGGCAACTGGCTTACATTTCC...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGAGCTGGAGGCCATATTaGGCCAGTTCGGACGCCATG +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGSWRPY*ASSDAM
Trigger: CATGGCGTCCGAACTGGCCAAATATGGCCTCCAGCT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGCTGGGCCAGCATCTCTaGGTAGACGGCTGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: VSAGKHSGELVLKKASRELGQHL*VDGCQR
Trigger: CCTCTGGCAGCCGTCTACCAAGAGATGCTGGCCCAG...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCTCCTCCGGATGGCTTaGTTGATCCGCTGCACAGCG +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASLLRMA*LIRCTA
Trigger: CGCTGTGCAGCGGATCAACAAAGCCATCCGGAGGAG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGCAGACGCCTCAGGTATaGCCTCCGAGCTGCCCACAT +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVQTPQV*PPSCPH
Trigger: ATGTGGGCAGCTCGGAGGCAATACCTGAGGCGTCTG...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTATCCTGTAGTCATCTaGGGCTTTCCTGGCTCGGAA +
Preference number: 5 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGYPVVI*GFPGSE
Trigger: TTCCGAGCCAGGAAAGCCCAAGATGACTACAGGATA...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTCTCTTGGTCAGCTTCTaGCAGTGGGAGACCACTTCC +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTLLVSF*QWETTS
Trigger: GGAAGTGGTCTCCCACTGCAAGAAGCTGACCAAGAG...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGTCATGGCGAGGAGGTaGCGTAGGGCGATGTCCAGT +
Preference number: 5 (lower is better)
Translates to: VLPSGRKARGLSCMIKATVMARR*RRAMSS
Trigger: ACTGGACATCGCCCTACGCAACCTCCTCGCCATGAC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGTCATGGCGAGGAGGTaGCGTAGGGCGATGTCCAGT +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVVMARR*RRAMSS
Trigger: ACTGGACATCGCCCTACGCAACCTCCTCGCCATGAC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTCGGCCAACAGCTGCTaGGTGCTCAGAAGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLSANSC*VLRSRL
Trigger: TAGCCTGCTTCTGAGCACCAAGCAGCTGTTGGCCGA...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCCGGCTCATCAGCTGCTaGTGGGCTGCTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLRLISC*WAASCS
Trigger: AGAGCAAGAAGCAGCCCACAAGCAGCTGATGAGCCG...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCAGAGGTAAGAGGGGCTaGGGTAGCACCCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLRGKRG*GSTLCL
Trigger: GAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCTCCTTCTTCCAGGTTaGAATCTCCCGCCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLLLLPG*NLPPLG
Trigger: GCCCAACGGCGGGAGATTCAAACCTGGAAGAAGGAG...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAGCCTCCATCCAGCGCTaGGCCTCCTCCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGASIQR*ASSSRH
Trigger: GTGCCGGCTGGAGGAGGCCAAGCGCTGGATGGAGGC...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAAACAGTGGCCTAGCTaGGCCAGCAGCACTCCATTC +
Preference number: 5 (lower is better)
Translates to: SGRKARGLSCMIKATQLDKQWPS*ASSTPF
Trigger: GAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTTT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGGAAATGTAAGCCAGTaGCCTGGTACCGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLGNVSQ*PGTAAA
Trigger: AGCAGCTGCGGTACCAGGCAACTGGCTTACATTTCC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCAGTTCGGACGCCATGTaGCTGAGTTCCTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLSSDAM*LSSSAV
Trigger: CACAGCTGAGGAACTCAGCAACATGGCGTCCGAACT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACTCCGGATGGCTTTGTaGATCCGCTGCACAGCGTGG +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLLRMAL*IRCTAW
Trigger: CCACGCTGTGCAGCGGATCAACAAAGCCATCCGGAG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCGTATTAGTGTCCTGGTaGGCTCTGACCACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLVLVSW*ALTTPW
Trigger: CCAGGGAGTGGTCAGAGCCAACCAGGACACTAATAC...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGGCTTTCCAGAGCTGTaGGCGGTCATAGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVGFPEL*AVIGSS
Trigger: ACTGCTGCCTATGACCGCCAACAGCTCTGGAAAGCC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAGCCCAGGCCTGGATCTaGATTATGGCATCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAAQAWI*IMASRF
Trigger: AAACCTGGATGCCATAATCAAGATCCAGGCCTGGGC...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCTCATGCAGGGGGTCTaGGTGATCAGGGGCAATGCA +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASLMQGV*VIRGNA
Trigger: TGCATTGCCCCTGATCACCAAGACCCCCTGCATGAG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTAGGGACACTTCTAGCTaGCTCAGGTCCGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASRDTSS*LRSVCP
Trigger: TGGGCACACGGACCTGAGCAAGCTAGAAGTGTCCCT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAAGGGACAGGATCTCCTaGAGGGTGTCCCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVARDRIS*RVSPGW
Trigger: CCATCCTGGGGACACCCTCAAGGAGATCCTGTCCCT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACTGTGTCTGTGCTGGTaGCGGATGTCCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLLCLCW*RMSLAS
Trigger: GCTGGCCAAGGACATCCGCAACCAGCACAGACACAG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGATGAGTGAGAATCTGTaGCCCCAACCTAAGGTGACT +
Preference number: 5 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGMSENL*PQPKVT
Trigger: AGTCACCTTAGGTTGGGGCAACAGATTCTCACTCAT...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGAGAGCCCCATGGACGTaGACATGGTTGATATTGCCC +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGRAPWT*TWLILP
Trigger: GGGCAATATCAACCATGTCAACGTCCATGGGGCTCT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGTTCCTGATCACCCTTaGTGTTGGCTGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVVPDHP*CWLQPH
Trigger: GTGTGGCTGCAGCCAACACAAAGGGTGATCAGGAAC...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAGCGTGGAGCATGGCTaGTTCCTGATCACCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SGRKARGLSCMIKATQLDSVEHG*FLITLC
Trigger: ACAAAGGGTGATCAGGAACAAGCCATGCTCCACGCT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATGGGCCTTCTGCCTTTaGGCTGCCACAAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVAWAFCL*AATRRR
Trigger: TCTCCTCCTTGTGGCAGCCAAAAGGCAGAAGGCCCA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTCTGGACGCTGTTTCTTaGCCATGGCACTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASLDAVS*PWHFPG
Trigger: CCCTGGAAAGTGCCATGGCAAAGAAACAGCGTCCAG...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGCTGGACGCTGTTTCTTaGCCATGGCACTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVLDAVS*PWHFPG
Trigger: CCCTGGAAAGTGCCATGGCAAAGAAACAGCGTCCAG...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGGCTTTCCAGAGCTGTaGGCGGTCATAGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: ENPSGRKARGLSCMIKATGFPEL*AVIGSS
Trigger: ACTGCTGCCTATGACCGCCAACAGCTCTGGAAAGCC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTGCCCAGGCCTGGATCTaGATTATGGCATCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLAQAWI*IMASRF
Trigger: AAACCTGGATGCCATAATCAAGATCCAGGCCTGGGC...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp ATGGCTTTCCCAGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGGAAGTCTTGCTGGCTTaGATTCAAGAGATGGGCAAA +
Preference number: 5 (lower is better)
Translates to: MAFPGQGPCPTIWQESQGEVLLA*IQEMGK
Trigger: TTTGCCCATCTCTTGAATCAAAGCCAGCAAGACTTC...CCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCTGGGAAAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTACTGCCTCCATGAACTaGGTGGTTTTGTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTTASMN*VVLFCG
Trigger: GCCACAGAACAAAACCACCAAGTTCATGGAGGCAGT...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGGACGCTGAGCACTTaGTCTTCTAGCACATCCTGG +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLWTLST*SSSTSW
Trigger: CCAGGATGTGCTAGAAGACAAAGTGCTCAGCGTCCA...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGGTTGCCTTCAGGACTTaGGCCACATATCGCATCCCA +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGVAFRT*ATYRIP
Trigger: TGGGATGCGATATGTGGCCAAAGTCCTGAAGGCAAC...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAAGCAGGCTACGGGTGTaGGAGTCATCAGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLSRLRV*ESSASA
Trigger: GGCAGATGCTGATGACTCCAACACCCGTAGCCTGCT...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATCGGCCAACAGCTGCTaGGTGCTCAGAAGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLSANSC*VLRSRL
Trigger: TAGCCTGCTTCTGAGCACCAAGCAGCTGTTGGCCGA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTACTTGTGGGCTGCTTCTaGCTCTCTGGAAGCCGAGAG +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLLVGCF*LSGSRE
Trigger: CTCTCGGCTTCCAGAGAGCAAGAAGCAGCCCACAAG...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 90 bp CCGATGTGGGCTATTGCAGATAGCCAAAAGTTGATGTTGTCTGTGTaGCGGAAATGTAAGCCAGTTGCCTGGTACCGCAGCTGCTCCACA +
Preference number: 5 (lower is better)
Translates to: PMWAIADSQKLMLSV*RKCKPVAWYRSCST
Trigger: TGTGGAGCAGCTGCGGTACCAGGCAACTGGCTTACATTTCCGTCACACAGACAACATCAACTTTTGGCTATCTGCAATAGCCCACATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAAAACAGTGGCCTAGCTaGGCCAGCAGCACTCCATTC +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLKQWPS*ASSTPF
Trigger: GAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTTT...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAAGTTCGGACGCCATGTaGCTGAGTTCCTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVASSDAM*LSSSAV
Trigger: CACAGCTGAGGAACTCAGCAACATGGCGTCCGAACT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGAGAGCCCCATGGACGTaGACATGGTTGATATTGCCC +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVRAPWT*TWLILP
Trigger: GGGCAATATCAACCATGTCAACGTCCATGGGGCTCT...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGTTCCTGATCACCCTTaGTGTTGGCTGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTVPDHP*CWLQPH
Trigger: GTGTGGCTGCAGCCAACACAAAGGGTGATCAGGAAC...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTATTAGTGTCCTGGTaGGCTCTGACCACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: VSAGKHSGELVLKKASREVLVSW*ALTTPW
Trigger: CCAGGGAGTGGTCAGAGCCAACCAGGACACTAATAC...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGATAACAAAGCCGACGTaGGCTTTCCAGAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGITKPT*AFQSCW
Trigger: CCAACAGCTCTGGAAAGCCAACGTCGGCTTTGTTAT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTATAACAAAGCCGACGTaGGCTTTCCAGAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLITKPT*AFQSCW
Trigger: CCAACAGCTCTGGAAAGCCAACGTCGGCTTTGTTAT...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACTCTTGGTCAGCTTCTaGCAGTGGGAGACCACTTCC +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVALLVSF*QWETTS
Trigger: GGAAGTGGTCTCCCACTGCAAGAAGCTGACCAAGAG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTGCTCCACCTTTGACTaGATTTCCTCCTGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGCSTFD*ISSWSA
Trigger: AGCACTCCAGGAGGAAATCAAGTCAAAGGTGGAGCA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTGCTCCACCTTTGACTaGATTTCCTCCTGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: SGRKARGLSCMIKATQLDCSTFD*ISSWSA
Trigger: AGCACTCCAGGAGGAAATCAAGTCAAAGGTGGAGCA...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTAGTCCTTCAAACTTGTaGGTCAGCGTCAGGGACACT +
Preference number: 5 (lower is better)
Translates to: GLSCMIKATQLDSGQGPLSPSNL*VSVRDT
Trigger: AGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACT...AAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTAGTCCTTCAAACTaGTTGGTCAGCGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SGRKARGLSCMIKATQLDSSPSN*LVSVRD
Trigger: GTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGA...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGGAAATCAAGCCGCTGGGGCAGTGCTTGTAATATTGGGGTGACTGTGGGAGGGTTCCGCAAAAACTTCTaGTTGAGGAGGAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: GKSSRWGSACNIGVTVGGFRKNF*LRRKMR
Trigger: TCTCATCTTCCTCCTCAACAAGAAGTTTTTGCGGAA...CCCTCCCACAGTCACCCCAATATTACAAGCACTGCCCCAGCGGCTTGATTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGGCCAGGCAGGCAAGGAAAGCCAGGGGTTaGTCATGCATGATAAAAGCC +
Preference number: 5 (lower is better)
Translates to: GKAHFSQLEDTLSVARQARKARG*SCMIKA
Trigger: GGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT...TGCCTGCCTGGCCACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 90 bp AGGTCGAAGGCAGACCGATGTGGGCTATTGCAGATAGCCAAAAGTTaGTGTTGTCTGTGTGACGGAAATGTAAGCCAGTTGCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: RSKADRCGLLQIAKS*CCLCDGNVSQLPGT
Trigger: GGTACCAGGCAACTGGCTTACATTTCCGTCACACAGACAACATCAACTTTTGGCTATCTGCAATAGCCCACATCGGTCTGCCTTCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACGCTCCACTGCTTCATaGATGGCAAGAACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVARSTAS*MARTAA
Trigger: TGCAGCTGTTCTTGCCATCAATGAAGCAGTGGAGCG...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGGACGTTGACATGGTaGATATTGCCCTGGATTTCA +
Preference number: 5 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHAWTLTW*ILPWIS
Trigger: TGAAATCCAGGGCAATATCAACCATGTCAACGTCCA...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGAGCGTGGAGCATGGCTaGTTCCTGATCACCCTTTGT +
Preference number: 5 (lower is better)
Translates to: VSAGKHSGELVLKKASRESVEHG*FLITLC
Trigger: ACAAAGGGTGATCAGGAACAAGCCATGCTCCACGCT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATTCTCAGGGCTGCCTTaGTCCAGAGCCTCATTGATG +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVAFSGLP*SRASLM
Trigger: CATCAATGAGGCTCTGGACAAAGGCAGCCCTGAGAA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTATCCTGTAGTCATCTaGGGCTTTCCTGGCTCGGAA +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVYPVVI*GFPGSE
Trigger: TTCCGAGCCAGGAAAGCCCAAGATGACTACAGGATA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTACCAGCAGGCCAATCTaGATGTCCATGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASTSRPI*MSMMLR
Trigger: CCTCAACATCATGGACATCAAGATTGGCCTGCTGGT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATGGACGCTGAGCACTTaGTCTTCTAGCACATCCTGG +
Preference number: 5 (lower is better)
Translates to: ENPSGRKARGLSCMIKATWTLST*SSSTSW
Trigger: CCAGGATGTGCTAGAAGACAAAGTGCTCAGCGTCCA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAGTTGCCTTCAGGACTTaGGCCACATATCGCATCCCA +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVAVAFRT*ATYRIP
Trigger: TGGGATGCGATATGTGGCCAAAGTCCTGAAGGCAAC...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTCTAGTCCTTCAAACTaGTTGGTCAGCGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVSSPSN*LVSVRD
Trigger: GTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTGACTTTGGCCTTGTaGAAGAGTTTCATGACAGCC +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTLTLAL*KSFMTA
Trigger: GGCTGTCATGAAACTCTTCAACAAGGCCAAAGTCAA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGAGGAAAGCCAGGGGTTaGTCATGCATGATAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGRKARG*SCMIKA
Trigger: GGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 90 bp CTTGCTGGCTTTGATTCAAGAGATGGGCAAATCTGCGTACCACACTaGGAGGAGGGTGGGGTGCATGCACTAATATCCTGTAGTCATCTT +
Preference number: 5 (lower is better)
Translates to: LAGFDSRDGQICVPH*EEGGVHALISCSHL
Trigger: AAGATGACTACAGGATATTAGTGCATGCACCCCACCCTCCTCTCAGTGTGGTACGCAGATTTGCCCATCTCTTGAATCAAAGCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 90 bp TGGCCACATATCGCATCCCATACGGAATTTGGTCCACAGATGAGGTaGTGGCTAAAAGGAACTTATCAGTCATGGCGAGGAGGTTGCGTA +
Preference number: 5 (lower is better)
Translates to: WPHIASHTEFGPQMR*WLKGTYQSWRGGCV
Trigger: TACGCAACCTCCTCGCCATGACTGATAAGTTCCTTTTAGCCATCACCTCATCTGTGGACCAAATTCCGTATGGGATGCGATATGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp CTCCATGTCCACACCCAGGAACTTGGCATTTACTTCAAACTTTCCTaGCTCATCTCCCGGCGTGATGTCAAAGATGACGTTTCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LHVHTQELGIYFKLS*LISRRDVKDDVSEV
Trigger: CACTTCAGAAACGTCATCTTTGACATCACGCCGGGAGATGAGGCAGGAAAGTTTGAAGTAAATGCCAAGTTCCTGGGTGTGGACATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp AAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTaGCTCTGTCACTTCCGCAAAAACTTCTTGTTGAGGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: KESIQRGKRGLGSTL*LCHFRKNFLLRRKM
Trigger: CATCTTCCTCCTCAACAAGAAGTTTTTGCGGAAGTGACAGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGACTCCGGATGGCTTTGTaGATCCGCTGCACAGCGTGG +
Preference number: 5 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGLRMAL*IRCTAW
Trigger: CCACGCTGTGCAGCGGATCAACAAAGCCATCCGGAG...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAACCAGCAGGCCAATCTaGATGTCCATGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVATSRPI*MSMMLR
Trigger: CCTCAACATCATGGACATCAAGATTGGCCTGCTGGT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACATGTTCCTTATTCCTCTaGGTCAGCTTCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: VLPSGRKARGLSCMIKATCSLFL*VSFLQW
Trigger: CCACTGCAAGAAGCTGACCAAGAGGAATAAGGAACA...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGACTGCCTCCATGAACTaGGTGGTTTTGTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: VSAGKHSGELVLKKASRETASMN*VVLFCG
Trigger: GCCACAGAACAAAACCACCAAGTTCATGGAGGCAGT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTAATTTCTCTGCCAGAGTaGCCTTCAGGACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLISLPE*PSGLWP
Trigger: TGGCCAAAGTCCTGAAGGCAACTCTGGCAGAGAAAT...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGATGAACTTCCTGAACTaGAGGTGTGTTTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGMNFLN*RCVSSR
Trigger: TCTGGAGGAAACACACCTCAAGTTCAGGAAGTTCAT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCATGAACTTCCTGAACTaGAGGTGTGTTTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: WQESQGFVMHDKSHTAGLMNFLN*RCVSSR
Trigger: TCTGGAGGAAACACACCTCAAGTTCAGGAAGTTCAT...GAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAAGTCCTTCAAACTTGTaGGTCAGCGTCAGGGACACT +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVASPSNL*VSVRDT
Trigger: AGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTCCACACCCAGGAACTaGGCATTTACTTCAAACTTT +
Preference number: 5 (lower is better)
Translates to: GFVMHDKSHTAGLWARPTSTPRN*AFTSNF
Trigger: AAAGTTTGAAGTAAATGCCAAGTTCCTGGGTGTGGA...AGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGTTGACTTTGGCCTTGTaGAAGAGTTTCATGACAGCC +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGLTLAL*KSFMTA
Trigger: GGCTGTCATGAAACTCTTCAACAAGGCCAAAGTCAA...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACAGGAAGATGAGAAGGTaGACATTGACTTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SGRKARGLSCMIKATQLDRKMRR*TLTLAL
Trigger: CAAGGCCAAAGTCAATGTCAACCTTCTCATCTTCCT...GTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 90 bp TCTGATTCCATTTCTACCCTTAGGCCTCAACAAGTTGTCACCTTGTaGAGGAGCCAACAGGGGGATCTCTTAACCCATTCTCTCCCCATT +
Preference number: 5 (lower is better)
Translates to: SDSISTLRPQQVVTL*RSQQGDLLTHSLPI
Trigger: AATGGGGAGAGAATGGGTTAAGAGATCCCCCTGTTGGCTCCTTCACAAGGTGACAACTTGTTGAGGCCTAAGGGTAGAAATGGAATCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS GCA 90 bp TCTCTCATCCTTTGTGTTAGCATGTCAGCCCATATCCTCCCACTGTaGTGTCCCAGATGTTTTACGGTTTCTCCACAGGAGGTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: SLILCVSMSAHILPL*CPRCFTVSPQEVEK
Trigger: TTTCTCTACCTCCTGTGGAGAAACCGTAAAACATCTGGGACAGCACAGTGGGAGGATATGGGCTGACATGCTAACACAAAGGATGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS CCA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTaGGTAGCACCCTTTGCCTCTGTCACTTCCGCAAAAACTTCTTGT +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGA*VAPFASVTSAKTSC
Trigger: ACAAGAAGTTTTTGCGGAAGTGACAGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGCTGGACTCTGGGCAAGGCCCACTTTAGCCAATTAGAAGATACACTGTCTGTGTGGACGTTGACATGGTaGATATTGCCCTGGATTTCA +
Preference number: 5 (lower is better)
Translates to: SWTLGKAHFSQLEDTLSVWTLTW*ILPWIS
Trigger: TGAAATCCAGGGCAATATCAACCATGTCAACGTCCA...CACAGACAGTGTATCTTCTAATTGGCTAAAGTGGGCCTTGCCCAGAGTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGCTCAGCCAAGAAGTCTaGCTGGCTTTGATTCAAGAG +
Preference number: 5 (lower is better)
Translates to: VSAGKHSGELVLKKASRELSQEV*LALIQE
Trigger: CTCTTGAATCAAAGCCAGCAAGACTTCTTGGCTGAG...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACTCAGCCAAGAAGTCTaGCTGGCTTTGATTCAAGAG +
Preference number: 5 (lower is better)
Translates to: ENPSGRKARGLSCMIKATLSQEV*LALIQE
Trigger: CTCTTGAATCAAAGCCAGCAAGACTTCTTGGCTGAG...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACATGTTCCTTATTCCTCTaGGTCAGCTTCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTCSLFL*VSFLQW
Trigger: CCACTGCAAGAAGCTGACCAAGAGGAATAAGGAACA...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCATTCTGCCGTTTCTCTTaGCTCAGCGACTTTAAACCC +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVAFCRFS*LSDFKP
Trigger: GGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGAA...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAAGGGACACTTCTAGCTaGCTCAGGTCCGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGRDTSS*LRSVCP
Trigger: TGGGCACACGGACCTGAGCAAGCTAGAAGTGTCCCT...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp AGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGATGAGAAGGTTGACATaGACTTTGGCCTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RKARGLSCMIKATQLDSGMRRLT*TLALLK
Trigger: CTTCAACAAGGCCAAAGTCAATGTCAACCTTCTCAT...CCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp AGGTCAAGGTCCATGTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCAACAAGAGAACAAGACTaGAAGCTAATGGAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: RSRSMSYHLAGKPGVCHATREQD*KLMEGH
Trigger: ATGACCTTCCATTAGCTTCAAGTCTTGTTCTCTTGT...TGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGACATGGACCTTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GAGAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAGAAGTCTTGCTGGCTTaGATTCAAGAGATGGGCAAA +
Preference number: 5 (lower is better)
Translates to: ENPSGRKARGLSCMIKATEVLLA*IQEMGK
Trigger: TTTGCCCATCTCTTGAATCAAAGCCAGCAAGACTTC...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTTTCCGCAAAAACTTCTaGTTGAGGAGGAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASFRKNF*LRRKMR
Trigger: TCTCATCTTCCTCCTCAACAAGAAGTTTTTGCGGAA...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp TTTGTCATGCATGATAAAAGCCACACAGCTGGACTCTGGGCAAGGCCCACTTTATCCACACCCAGGAACTaGGCATTTACTTCAAACTTT +
Preference number: 5 (lower is better)
Translates to: FVMHDKSHTAGLWARPTLSTPRN*AFTSNF
Trigger: AAAGTTTGAAGTAAATGCCAAGTTCCTGGGTGTGGA...TAAAGTGGGCCTTGCCCAGAGTCCAGCTGTGTGGCTTTTATCATGCATGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTCCTACCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACAACATTGACTTTGGCCTaGTTGAAGAGTTTCATGACA +
Preference number: 5 (lower is better)
Translates to: VLPSGRKARGLSCMIKATTLTLA*LKSFMT
Trigger: TGTCATGAAACTCTTCAACAAGGCCAAAGTCAATGT...TGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGTAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp TTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCACCCTTTGCCTCTACATTGACTTTGGCCTaGTTGAAGAGTTTCATGACA +
Preference number: 5 (lower is better)
Translates to: LKKASREVRGAWVAPFASTLTLA*LKSFMT
Trigger: TGTCATGAAACTCTTCAACAAGGCCAAAGTCAATGT...AGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAAGGTTGACATTGACTTaGGCCTTGTTGAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVARLTLT*ALLKSF
Trigger: GAAACTCTTCAACAAGGCCAAAGTCAATGTCAACCT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGAGGTTGACATTGACTTaGGCCTTGTTGAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VSAGKHSGELVLKKASRERLTLT*ALLKSF
Trigger: GAAACTCTTCAACAAGGCCAAAGTCAATGTCAACCT...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTTGGGTAGCAATGAGAAGGTTGACATaGACTTTGGCCTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GELVLKKASREVRGAWVAMRRLT*TLALLK
Trigger: CTTCAACAAGGCCAAAGTCAATGTCAACCTTCTCAT...TGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACTAACTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 90 bp GGTAGAAGAGGTGTTGGTATGCTTCTAGTTTCTGCCGTTTCTCTTTaGTCAGCGACTTTAAACCCTTCTGCTTGTCCAGAACCATCATAT +
Preference number: 5 (lower is better)
Translates to: GRRGVGMLLVSAVSL*SATLNPSACPEPSY
Trigger: ATATGATGGTTCTGGACAAGCAGAAGGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGAAACTAGAAGCATACCAACACCTCTTCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GTGTCTGCAGGGAAGCACAGTGGTGAGTTAGTGTTAAAGAAAGCATCCAGAGAGTTTAAACCCTTCTGCTaGTCCAGAACCATCATATCT +
Preference number: 5 (lower is better)
Translates to: VSAGKHSGELVLKKASREFKPFC*SRTIIS
Trigger: AGATATGATGGTTCTGGACAAGCAGAAGGGTTTAAA...CTCTCTGGATGCTTTCTTTAACACTAACTCACCACTGTGCTTCCCTGCAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS-3UTR CAA 90 bp GAATCCATCTGGCAGGAAAGCCAGGGGTTTGTCATGCATGATAAAAGCCACACATTTAAACCCTTCTGCTaGTCCAGAACCATCATATCT +
Preference number: 5 (lower is better)
Translates to: ESIWQESQGFVMHDKSHTFKPFC*SRTIIS
Trigger: AGATATGATGGTTCTGGACAAGCAGAAGGGTTTAAA...TGTGTGGCTTTTATCATGCATGACAAACCCCTGGCTTTCCTGCCAGATGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS-3UTR CAA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAATTTCTCTGCCAGAGTaGCCTTCAGGACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGISLPE*PSGLWP
Trigger: TGGCCAAAGTCCTGAAGGCAACTCTGGCAGAGAAAT...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGATTCTGCCGTTTCTCTTaGCTCAGCGACTTTAAACCC +
Preference number: 5 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGFCRFS*LSDFKP
Trigger: GGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGAA...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS-3UTR CAA 90 bp GACCCACATATTAAACAGACCACAGACAAGAGAACAAGACTTGAAGCTAATGGAAGGAAGATGAGAAGGTaGACATTGACTTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: DPHIKQTTDKRTRLEANGRKMRR*TLTLAL
Trigger: CAAGGCCAAAGTCAATGTCAACCTTCTCATCTTCCT...TCCATTAGCTTCAAGTCTTGTTCTCTTGTCTGTGGTCTGTTTAATATGTGGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361170.7
CDS GCA 72 bp CCACCTCAGCCAGGCCTGTGGCAGGGTTCACCAGGCTaGTCCAGAAGCCACTGGCATCCCGGGCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PPQPGLWQGSPG*SRSHWHPGPPG
Trigger: CCCTGGAGGCCCGGGATGCCAGTGGCTTCTGGAGCAGCCTGGTGAACCCTGCCACAGGCCTGGCTGAGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp GCGAGGAGGTTGCGTAGGGCGATGTCCAGTCGTCTCTaGACCTCGGGGTGGCTCAAGGCCTGCTCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: ARRLRRAMSSRL*TSGWLKACSGV
Trigger: CACCCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGAGACGACTGGACATCGCCCTACGCAACCTCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS GCA 72 bp GGACCCGTAGGTGCTGGCTCTGCCCAGAGAAGGCCTTaGCAGCCGCAGCGTGCTGTAGGAGCTGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: GPVGAGSAQRRP*QPQRAVGAEPQ
Trigger: CTGTGGCTCAGCTCCTACAGCACGCTGCGGCTGGCAAGGCCTTCTCTGGGCAGAGCCAGCACCTACGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp GTCAGTGAGCGGTGTCGTCGCAGTGGCTCCGGTGTCTaGGCTGTACAGGCCTGGCGTCGGCTCATCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VSERCRRSGSGV*AVQAWRRLISC
Trigger: GCAGCTGATGAGCCGACGCCAGGCCTGTACAGCCCAGACACCGGAGCCACTGCGACGACACCGCTCACTGAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GTTGGCACAGTCGGGAACTACCCCTCGAAGGGCCACTaGGGGGTTCCTCAACACCCGCTCAGTCTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: VGTVGNYPSKGH*GVPQHPLSLGC
Trigger: GCAGCCCAGACTGAGCGGGTGTTGAGGAACCCCGCAGTGGCCCTTCGAGGGGTAGTTCCCGACTGTGCCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp CGTCGCAGTGGCTCCGGTGTCTGGGCTGTACAGGCCTaGCGTCGGCTCATCAGCTGCTTGTGGGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RRSGSGVWAVQA*RRLISCLWAAS
Trigger: AGAAGCAGCCCACAAGCAGCTGATGAGCCGACGCCAGGCCTGTACAGCCCAGACACCGGAGCCACTGCGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 72 bp TCTGGACCTCGGGGTGGCTCAAGGCCTGCTCCGGGGTaGCATCATATGGGAGATGGCTGCGCTGCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SGPRGGSRPAPG*HHMGDGCAALS
Trigger: AGACAGGGCAGCGCAGCCATCTCCCATATGATGTCACCCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS CCA 72 bp CGTAGGGCGATGTCCAGTCGTCTCTGGACCTCGGGGTaGCTCAAGGCCTGCTCCGGGGTGACATCATATGGG +
Preference number: 6 (lower is better)
Translates to: RRAMSSRLWTSG*LKACSGVTSYG
Trigger: CCCATATGATGTCACCCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGAGACGACTGGACATCGCCCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS CAA 72 bp ATGTTCCTCCTTCTTCCAGGTTTGAATCTCCCGCCGTaGGGCCACCGCCCCTCACCGTCGGCACCGCCAGAC +
Preference number: 6 (lower is better)
Translates to: MFLLLPGLNLPP*GHRPSPSAPPD
Trigger: GTCTGGCGGTGCCGACGGTGAGGGGCGGTGGCCCAACGGCGGGAGATTCAAACCTGGAAGAAGGAGGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491900.1
CDS TCA 72 bp TTGGTGACAGCTGACTGGATCTCCTCCCGGGTCAGGTaGGAGGTGTTGAGGGGGCAGCCAGGAGGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: LVTADWISSRVR*EVLRGQPGGCS
Trigger: GGAGCAACCTCCTGGCTGCCCCCTCAACACCTCTCACCTGACCCGGGAGGAGATCCAGTCAGCTGTCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 72 bp GCTCGTCCACTAGCCCCTGGTAGCCATTTCTGGCGCTaGCCAACCCCAGGGCTTCAAGTCGGCGTAGGTTCC +
Preference number: 6 (lower is better)
Translates to: ARPLAPGSHFWR*PTPGLQVGVGS
Trigger: GGAACCTACGCCGACTTGAAGCCCTGGGGTTGGTCAGCGCCAGAAATGGCTACCAGGGGCTAGTGGACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GTCTGGGCTGTACAGGCCTGGCGTCGGCTCATCAGCTaGTTGTGGGCTGCTTCTTGCTCTCTGGAAGCCGAG +
Preference number: 6 (lower is better)
Translates to: VWAVQAWRRLIS*LWAASCSLEAE
Trigger: CTCGGCTTCCAGAGAGCAAGAAGCAGCCCACAAGCAGCTGATGAGCCGACGCCAGGCCTGTACAGCCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp TTGCCATGGCACTTTCCAGGGCTCGCTGGTAGCCGTTaGCACAGTCGGGAACTACCCCTCGAAGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: LPWHFPGLAGSR*HSRELPLEGPL
Trigger: CAGTGGCCCTTCGAGGGGTAGTTCCCGACTGTGCCAACGGCTACCAGCGAGCCCTGGAAAGTGCCATGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp ACCAGCTCTGCCTTCCGCCTGTGCCTGTGTCTGTGCTaGTTGCGGATGTCCTTGGCCAGCTCGTCCACTAGC +
Preference number: 6 (lower is better)
Translates to: TSSAFRLCLCLC*LRMSLASSSTS
Trigger: GCTAGTGGACGAGCTGGCCAAGGACATCCGCAACCAGCACAGACACAGGCACAGGCGGAAGGCAGAGCTGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp CCTCCCTGCAGGACTATCACCCTGCTCTGCTCCCCATaGTGGCCTGGCCCTCTTGAAATCCCATGCGTAGGC +
Preference number: 6 (lower is better)
Translates to: PPCRTITLLCSP*WPGPLEIPCVG
Trigger: GCCTACGCATGGGATTTCAAGAGGGCCAGGCCACCATGGGGAGCAGAGCAGGGTGATAGTCCTGCAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476565.1
CDS TCA 72 bp CAAGGACCCGGTCAGTCTCTTCCTGGGTCTGTGCATTaGCCTGGCTCACGGTGGCCTGCAGGTCATTCCAGC +
Preference number: 6 (lower is better)
Translates to: QGPGQSLPGSVH*PGSRWPAGHSS
Trigger: GCTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp CACTGCGGGGTTCCTCAACACCCGCTCAGTCTGGGCTaGCTTGCCCTCCTTGATGGCTTGATTGATGGCAGC +
Preference number: 6 (lower is better)
Translates to: HCGVPQHPLSLG*LALLDGLIDGS
Trigger: GCTGCCATCAATCAAGCCATCAAGGAGGGCAAGGCAGCCCAGACTGAGCGGGTGTTGAGGAACCCCGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp TTCACCAGCTCTGCCTTCCGCCTGTGCCTGTGTCTGTaGTGGTTGCGGATGTCCTTGGCCAGCTCGTCCACT +
Preference number: 6 (lower is better)
Translates to: FTSSAFRLCLCL*WLRMSLASSST
Trigger: AGTGGACGAGCTGGCCAAGGACATCCGCAACCAGCACAGACACAGGCACAGGCGGAAGGCAGAGCTGGTGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp ACCCGGTCAGTCTCTTCCTGGGTCTGTGCATTGACCTaGCTCACGGTGGCCTGCAGGTCATTCCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: TRSVSSWVCALT*LTVACRSFQLR
Trigger: CCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp ATGAGGCTGACTGCAAGGACCCGGTCAGTCTCTTCCTaGGTCTGTGCATTGACCTGGCTCACGGTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: MRLTARTRSVSS*VCALTWLTVAC
Trigger: GCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTGCAGTCAGCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp GCAAGGACCCGGTCAGTCTCTTCCTGGGTCTGTGCATaGACCTGGCTCACGGTGGCCTGCAGGTCATTCCAG +
Preference number: 6 (lower is better)
Translates to: ARTRSVSSWVCA*TWLTVACRSFQ
Trigger: CTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 90 bp AGGCTGACTGCAAGGACCCGGTCAGTCTCTTCCTGGGTCTGTGCATaGACCTGGCTCACGGTGGCCTGCAGGTCATTCCAGCTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RLTARTRSVSSWVCA*TWLTVACRSFQLRK
Trigger: CTTCCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTGCAGTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 72 bp CAGTGTCAGCCGCCACTCTCCTCCGGATGGCTTTGTTaGTCCGCTGCACAGCGTGGAGCATGGCTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: QCQPPLSSGWLC*SAAQRGAWLVP
Trigger: AGGAACAAGCCATGCTCCACGCTGTGCAGCGGATCAACAAAGCCATCCGGAGGAGAGTGGCGGCTGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp TCCTGGGTCTGTGCATTGACCTGGCTCACGGTGGCCTaGAGGTCATTCCAGCTCAGGAAGTCCTCACCCATC +
Preference number: 6 (lower is better)
Translates to: SWVCALTWLTVA*RSFQLRKSSPI
Trigger: GATGGGTGAGGACTTCCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GACTGCAAGGACCCGGTCAGTCTCTTCCTGGGTCTGTaGATTGACCTGGCTCACGGTGGCCTGCAGGTCATT +
Preference number: 6 (lower is better)
Translates to: DCKDPVSLFLGL*IDLAHGGLQVI
Trigger: AATGACCTGCAGGCCACCGTGAGCCAGGTCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp CAGGTCCTCAGAAAGTGGGAATGCTCAGCAAACTTCTaGCGAACTAGGAAGCCACGGAGGCGGGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: QVLRKWECSANF*RTRKPRRRAWS
Trigger: GCTCCAGGCCCGCCTCCGTGGCTTCCTAGTTCGGCAGAAGTTTGCTGAGCATTCCCACTTTCTGAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GGTAGAATCTCACCACCAGCCTCACCACTGTTGGGTTaGCTGTCACCACGTCCTGGGGCTGCTCCACCTTTG +
Preference number: 6 (lower is better)
Translates to: GRISPPASPLLG*LSPRPGAAPPL
Trigger: CAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGGTGGTGAGATTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361170.7
ENST00000491900.1
ENST00000498755.1
CDS CCA 72 bp AGGGAACCACGGAGGGTGCAAAACAGTGGCCTAGCTTaGCCAGCAGCACTCCATTCCGAAGGCTCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: REPRRVQNSGLA*PAALHSEGSPP
Trigger: TGGAGGAGAGCCTTCGGAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTTTTGCACCCTCCGTGGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp TGCCGAACTAGGAAGCCACGGAGGCGGGCCTGGAGCTaGATAACAAAGCCGACGTTGGCTTTCCAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: CRTRKPRRRAWS*ITKPTLAFQSC
Trigger: ACAGCTCTGGAAAGCCAACGTCGGCTTTGTTATCCAGCTCCAGGCCCGCCTCCGTGGCTTCCTAGTTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp AAGGGAACCACGGAGGGTGCAAAACAGTGGCCTAGCTaGGCCAGCAGCACTCCATTCCGAAGGCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: KGTTEGAKQWPS*ASSTPFRRLSS
Trigger: GGAGGAGAGCCTTCGGAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTTTTGCACCCTCCGTGGTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp ACAGTGTCAGCCGCCACTCTCCTCCGGATGGCTTTGTaGATCCGCTGCACAGCGTGGAGCATGGCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: TVSAATLLRMAL*IRCTAWSMACS
Trigger: GGAACAAGCCATGCTCCACGCTGTGCAGCGGATCAACAAAGCCATCCGGAGGAGAGTGGCGGCTGACACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 90 bp ATCTTCTTCAAGGGAACCACGGAGGGTGCAAAACAGTGGCCTAGCTaGGCCAGCAGCACTCCATTCCGAAGGCTCTCCTCCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: IFFKGTTEGAKQWPS*ASSTPFRRLSSSST
Trigger: GGTGGAGCTGGAGGAGAGCCTTCGGAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTTTTGCACCCTCCGTGGTTCCCTTGAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 90 bp AGGGCAGACAGAGTCTTCTCAGGGCTGCCTTTGTCCAGAGCCTCATaGATGAGGCTGACTGCAAGGACCCGGTCAGTCTCTTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RADRVFSGLPLSRAS*MRLTARTRSVSSWV
Trigger: GACCCAGGAAGAGACTGACCGGGTCCTTGCAGTCAGCCTCATCAATGAGGCTCTGGACAAAGGCAGCCCTGAGAAGACTCTGTCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 90 bp CTGTGCGTGTTGACCAGCTCCCCCACGGTGATGTACACCATGGGTTaGGCCACAGCCACCATGTCTGAGTACTCGTCCACTGCAAAACGC +
Preference number: 6 (lower is better)
Translates to: LCVLTSSPTVMYTMG*ATATMSEYSSTAKR
Trigger: GCGTTTTGCAGTGGACGAGTACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGTACATCACCGTGGGGGAGCTGGTCAACACGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp CATCTTGGCCTGGGCCAGCATCTCTTGGTAGACGGCTaGCAGAGGCTCTCGGAGATTCTCCAGAAGAGCACT +
Preference number: 6 (lower is better)
Translates to: HLGLGQHLLVDG*QRLSEILQKST
Trigger: AGTGCTCTTCTGGAGAATCTCCGAGAGCCTCTGGCAGCCGTCTACCAAGAGATGCTGGCCCAGGCCAAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GAAGTAGTGCAGACGCCTCAGGTATTGCCTCCGAGCTaGCCACATCCGGGCCCAGGCCTGGATCTTGATTAT +
Preference number: 6 (lower is better)
Translates to: EVVQTPQVLPPS*PHPGPGLDLDY
Trigger: ATAATCAAGATCCAGGCCTGGGCCCGGATGTGGGCAGCTCGGAGGCAATACCTGAGGCGTCTGCACTACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp AACTTCTGCCGAACTAGGAAGCCACGGAGGCGGGCCTaGAGCTGGATAACAAAGCCGACGTTGGCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: NFCRTRKPRRRA*SWITKPTLAFQ
Trigger: CTGGAAAGCCAACGTCGGCTTTGTTATCCAGCTCCAGGCCCGCCTCCGTGGCTTCCTAGTTCGGCAGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp ATTACGGTAGAATCTCACCACCAGCCTCACCACTGTTaGGTTGCCTGTCACCACGTCCTGGGGCTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: ITVESHHQPHHC*VACHHVLGLLH
Trigger: GTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGGTGGTGAGATTCTACCGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361170.7
ENST00000491900.1
ENST00000498755.1
CDS CCA 72 bp TGGTGGCCTGGCCCTCTTGAAATCCCATGCGTAGGCTaGGGTGGGGCTGTTGCACATACGGAATTTGGTCCA +
Preference number: 6 (lower is better)
Translates to: WWPGPLEIPCVG*GGAVAHTEFGP
Trigger: TGGACCAAATTCCGTATGTGCAACAGCCCCACCCCAGCCTACGCATGGGATTTCAAGAGGGCCAGGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476565.1
CDS CCA 72 bp AGCCTCACCACTGTTGGGTTGCCTGTCACCACGTCCTaGGGCTGCTCCACCTTTGACCTGTGGTTTAAGAGG +
Preference number: 6 (lower is better)
Translates to: SLTTVGLPVTTS*GCSTFDLWFKR
Trigger: CCTCTTAAACCACAGGTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS CAA 72 bp TTCACAGTGTCAGCCGCCACTCTCCTCCGGATGGCTTaGTTGATCCGCTGCACAGCGTGGAGCATGGCTTGT +
Preference number: 6 (lower is better)
Translates to: FTVSAATLLRMA*LIRCTAWSMAC
Trigger: ACAAGCCATGCTCCACGCTGTGCAGCGGATCAACAAAGCCATCCGGAGGAGAGTGGCGGCTGACACTGTGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp CATTACGGTAGAATCTCACCACCAGCCTCACCACTGTaGGGTTGCCTGTCACCACGTCCTGGGGCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: HYGRISPPASPL*GCLSPRPGAAP
Trigger: TGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGGTGGTGAGATTCTACCGTAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361170.7
ENST00000491900.1
ENST00000498755.1
CDS CAA 90 bp GATGAGGTGATGGCTAAAAGGAACTTATCAGTCATGGCGAGGAGGTaGCGTAGGGCGATGTCCAGTCGTCTCTGGACCTCGGGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: DEVMAKRNLSVMARR*RRAMSSRLWTSGWL
Trigger: GAGCCACCCCGAGGTCCAGAGACGACTGGACATCGCCCTACGCAACCTCCTCGCCATGACTGATAAGTTCCTTTTAGCCATCACCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS CAA 90 bp TGGGCTGCTTCTTGCTCTCTGGAAGCCGAGAGGGACAGGATCTCCTaGAGGGTGTCCCCAGGATGGAACTGTATGATATCGGCCAACAGC +
Preference number: 6 (lower is better)
Translates to: WAASCSLEAERDRIS*RVSPGWNCMISANS
Trigger: GCTGTTGGCCGATATCATACAGTTCCATCCTGGGGACACCCTCAAGGAGATCCTGTCCCTCTCGGCTTCCAGAGAGCAAGAAGCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp ACCACTGTTGGGTTGCCTGTCACCACGTCCTGGGGCTaGTCCACCTTTGACTTGATTTCCTCCTGGAGTGCT +
Preference number: 6 (lower is better)
Translates to: TTVGLPVTTSWG*STFDLISSWSA
Trigger: AGCACTCCAGGAGGAAATCAAGTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp AGAAAGCTGTGTCTGCTGGACGCTGTTTCTTTGCCATaGCACTTTCCAGGGCTCGCTGGTAGCCGTTGGCAC +
Preference number: 6 (lower is better)
Translates to: RKLCLLDAVSLP*HFPGLAGSRWH
Trigger: GTGCCAACGGCTACCAGCGAGCCCTGGAAAGTGCCATGGCAAAGAAACAGCGTCCAGCAGACACAGCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp TTGACCAGCTCCCCCACGGTGATGTACACCATGGGTTaGGCCACAGCCACCATGTCTGAGTACTCGTCCACT +
Preference number: 6 (lower is better)
Translates to: LTSSPTVMYTMG*ATATMSEYSST
Trigger: AGTGGACGAGTACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGTACATCACCGTGGGGGAGCTGGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GAGCATGGCTTGTTCCTGATCACCCTTTGTGTTGGCTaGAGCCACACCAGCCTGGACTTCCTCCTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: EHGLFLITLCVG*SHTSLDFLLFQ
Trigger: CTGGAAAAGGAGGAAGTCCAGGCTGGTGTGGCTGCAGCCAACACAAAGGGTGATCAGGAACAAGCCATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp ATGACTGCTGGGAGCCAGGTCCTCAGAAAGTGGGAATaGTCAGCAAACTTCTGCCGAACTAGGAAGCCACGG +
Preference number: 6 (lower is better)
Translates to: MTAGSQVLRKWE*SANFCRTRKPR
Trigger: CCGTGGCTTCCTAGTTCGGCAGAAGTTTGCTGAGCATTCCCACTTTCTGAGGACCTGGCTCCCAGCAGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp CCTATAACCCCGCCAATGAGCCTGGATCTTGATGACTaGTGGGAGCCAGGTCCTCAGAAAGTGGGAATGCTC +
Preference number: 6 (lower is better)
Translates to: PITPPMSLDLDD*WEPGPQKVGML
Trigger: GAGCATTCCCACTTTCTGAGGACCTGGCTCCCAGCAGTCATCAAGATCCAGGCTCATTGGCGGGGTTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp TGGCTAAAAGGAACTTATCAGTCATGGCGAGGAGGTTaGGTAGGGCGATGTCCAGTCGTCTCTGGACCTCGG +
Preference number: 6 (lower is better)
Translates to: WLKGTYQSWRGG*VGRCPVVSGPR
Trigger: CCGAGGTCCAGAGACGACTGGACATCGCCCTACGCAACCTCCTCGCCATGACTGATAAGTTCCTTTTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS GCA 72 bp AGCGTCAGGGACACTTCTAGCTTGCTCAGGTCCGTGTaGCCATCTGCAGCGATGCTCTCACCAATAAGGTCA +
Preference number: 6 (lower is better)
Translates to: SVRDTSSLLRSV*PSAAMLSPIRS
Trigger: TGACCTTATTGGTGAGAGCATCGCTGCAGATGGGCACACGGACCTGAGCAAGCTAGAAGTGTCCCTGACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp ACCACTGTTGGGTTGCCTGTCACCACGTCCTGGGGCTaGTCCACCTTTGACCTGTGGTTTAAGAGGTCATTG +
Preference number: 6 (lower is better)
Translates to: TTVGLPVTTSWG*STFDLWFKRSL
Trigger: CAATGACCTCTTAAACCACAGGTCAAAGGTGGAGCAGCCCCAGGACGTGGTGACAGGCAACCCAACAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS CCA 72 bp ATCTTCTTCAAGGGAACCACGGAGGGTGCAAAACAGTaGCCTAGCTTGGCCAGCAGCACTCCATTCCGAAGG +
Preference number: 6 (lower is better)
Translates to: IFFKGTTEGAKQ*PSLASSTPFRR
Trigger: CCTTCGGAATGGAGTGCTGCTGGCCAAGCTAGGCCACTGTTTTGCACCCTCCGTGGTTCCCTTGAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp AGCAGTAGGGCAGACAGAGTCTTCTCAGGGCTGCCTTaGTCCAGAGCCTCATTGATGAGGCTGACTGCAAGG +
Preference number: 6 (lower is better)
Translates to: SSRADRVFSGLP*SRASLMRLTAR
Trigger: CCTTGCAGTCAGCCTCATCAATGAGGCTCTGGACAAAGGCAGCCCTGAGAAGACTCTGTCTGCCCTACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp CTGGATAACAAAGCCGACGTTGGCTTTCCAGAGCTGTaGGCGGTCATAGGCAGCAGTGACCTTGGTGACAGC +
Preference number: 6 (lower is better)
Translates to: LDNKADVGFPEL*AVIGSSDLGDS
Trigger: GCTGTCACCAAGGTCACTGCTGCCTATGACCGCCAACAGCTCTGGAAAGCCAACGTCGGCTTTGTTATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 90 bp CGGGTGTTGGAGTCATCAGCATCTGCCTCTAGTCCTTCAAACTTGTaGGTCAGCGTCAGGGACACTTCTAGCTTGCTCAGGTCCGTGTGC +
Preference number: 6 (lower is better)
Translates to: RVLESSASASSPSNL*VSVRDTSSLLRSVC
Trigger: GCACACGGACCTGAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGAGGCAGATGCTGATGACTCCAACACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp ATGGCTAAAAGGAACTTATCAGTCATGGCGAGGAGGTaGCGTAGGGCGATGTCCAGTCGTCTCTGGACCTCG +
Preference number: 6 (lower is better)
Translates to: MAKRNLSVMARR*RRAMSSRLWTS
Trigger: CGAGGTCCAGAGACGACTGGACATCGCCCTACGCAACCTCCTCGCCATGACTGATAAGTTCCTTTTAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361170.7
ENST00000476565.1
ENST00000491900.1
ENST00000498755.1
CDS CAA 72 bp CGCTGTCTGTGGCGTCAGGGAATTTCTCTGCCAGAGTaGCCTTCAGGACTTTGGCCACATATCGCATCCCAT +
Preference number: 6 (lower is better)
Translates to: RCLWRQGISLPE*PSGLWPHIASH
Trigger: ATGGGATGCGATATGTGGCCAAAGTCCTGAAGGCAACTCTGGCAGAGAAATTCCCTGACGCCACAGACAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 90 bp CTACGGGTGTTGGAGTCATCAGCATCTGCCTCTAGTCCTTCAAACTaGTTGGTCAGCGTCAGGGACACTTCTAGCTTGCTCAGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: LRVLESSASASSPSN*LVSVRDTSSLLRSV
Trigger: CACGGACCTGAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGAGGCAGATGCTGATGACTCCAACACCCGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp AGCTGGAGGCCATATTTGGCCAGTTCGGACGCCATGTaGCTGAGTTCCTCAGCTGTGAATTTCACTTTCCCG +
Preference number: 6 (lower is better)
Translates to: SWRPYLASSDAM*LSSSAVNFTFP
Trigger: CGGGAAAGTGAAATTCACAGCTGAGGAACTCAGCAACATGGCGTCCGAACTGGCCAAATATGGCCTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp AACAGCTGCTTGGTGCTCAGAAGCAGGCTACGGGTGTaGGAGTCATCAGCATCTGCCTCTAGTCCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: NSCLVLRSRLRV*ESSASASSPSN
Trigger: GTTTGAAGGACTAGAGGCAGATGCTGATGACTCCAACACCCGTAGCCTGCTTCTGAGCACCAAGCAGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CCA 72 bp GGGCATGTTCTTTTTGTCATAGATGTCCGTGGTCTCTaGGAAGAAGGTCGAAGGCAGACCGATGTGGGCTAT +
Preference number: 6 (lower is better)
Translates to: GHVLFVIDVRGL*EEGRRQTDVGY
Trigger: ATAGCCCACATCGGTCTGCCTTCGACCTTCTTCCCAGAGACCACGGACATCTATGACAAAAAGAACATGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp CAGCAGCTCTGCCTCAGCCAAGAAGTCTTGCTGGCTTaGATTCAAGAGATGGGCAAATCTGCGTACCACACT +
Preference number: 6 (lower is better)
Translates to: QQLCLSQEVLLA*IQEMGKSAYHT
Trigger: AGTGTGGTACGCAGATTTGCCCATCTCTTGAATCAAAGCCAGCAAGACTTCTTGGCTGAGGCAGAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp GAGTCATCAGCATCTGCCTCTAGTCCTTCAAACTTGTaGGTCAGCGTCAGGGACACTTCTAGCTTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: ESSASASSPSNL*VSVRDTSSLLR
Trigger: CCTGAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGAGGCAGATGCTGATGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 90 bp TGGCTCTCAAAGCCTGCCCTGGTGTCCCCGCTCTTAAGGAATGTCTaGATATCTCTCTCATCCTTTGTGTTAGCATGTCAGCCCATATCC +
Preference number: 6 (lower is better)
Translates to: WLSKPALVSPLLRNV*ISLSSFVLACQPIS
Trigger: GGATATGGGCTGACATGCTAACACAAAGGATGAGAGAGATATCAAGACATTCCTTAAGAGCGGGGACACCAGGGCAGGCTTTGAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS TCA 72 bp GCTGTGAATTTCACTTTCCCGTATAGATCATGTATCTaGGGGGCCAATCCCAGCCGGAAGAGGAAGAGACTG +
Preference number: 6 (lower is better)
Translates to: AVNFTFPYRSCI*GANPSRKRKRL
Trigger: CAGTCTCTTCCTCTTCCGGCTGGGATTGGCCCCTCAGATACATGATCTATACGGGAAAGTGAAATTCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp CTTTGTGTTAGCATGTCAGCCCATATCCTCCCACTGTaGTGTCCCAGATGTTTTACGGTTTCTCCACAGGAG +
Preference number: 6 (lower is better)
Translates to: LCVSMSAHILPL*CPRCFTVSPQE
Trigger: CTCCTGTGGAGAAACCGTAAAACATCTGGGACAGCACAGTGGGAGGATATGGGCTGACATGCTAACACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS CCA 72 bp AGTCATCAGCATCTGCCTCTAGTCCTTCAAACTTGTTaGTCAGCGTCAGGGACACTTCTAGCTTGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: SHQHLPLVLQTC*SASGTLLACSG
Trigger: ACCTGAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGAGGCAGATGCTGATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp TTGGAGTCATCAGCATCTGCCTCTAGTCCTTCAAACTaGTTGGTCAGCGTCAGGGACACTTCTAGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: LESSASASSPSN*LVSVRDTSSLL
Trigger: GAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACTAGAGGCAGATGCTGATGACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp AGTGTTAAAGAAAGCATCCAGAGAGGTAAGAGGGGCTaGGGTAGCACCCTTTGCCTCTGTCACTTCCGCAAA +
Preference number: 6 (lower is better)
Translates to: SVKESIQRGKRG*GSTLCLCHFRK
Trigger: TTTGCGGAAGTGACAGAGGCAAAGGGTGCTACCCAAGCCCCTCTTACCTCTCTGGATGCTTTCTTTAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 72 bp GCTATTGCAGATAGCCAAAAGTTGATGTTGTCTGTGTaGCGGAAATGTAAGCCAGTTGCCTGGTACCGCAGC +
Preference number: 6 (lower is better)
Translates to: AIADSQKLMLSV*RKCKPVAWYRS
Trigger: GCTGCGGTACCAGGCAACTGGCTTACATTTCCGTCACACAGACAACATCAACTTTTGGCTATCTGCAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 72 bp TTTGATTCAAGAGATGGGCAAATCTGCGTACCACACTaGGAGGAGGGTGGGGTGCATGCACTAATATCCTGT +
Preference number: 6 (lower is better)
Translates to: FDSRDGQICVPH*EEGGVHALISC
Trigger: ACAGGATATTAGTGCATGCACCCCACCCTCCTCTCAGTGTGGTACGCAGATTTGCCCATCTCTTGAATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp CACACCCAGGAACTTGGCATTTACTTCAAACTTTCCTaGCTCATCTCCCGGCGTGATGTCAAAGATGACGTT +
Preference number: 6 (lower is better)
Translates to: HTQELGIYFKLS*LISRRDVKDDV
Trigger: AACGTCATCTTTGACATCACGCCGGGAGATGAGGCAGGAAAGTTTGAAGTAAATGCCAAGTTCCTGGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp CTTCTGATTCCATTTCTACCCTTAGGCCTCAACAAGTaGTCACCTTGTGAAGGAGCCAACAGGGGGATCTCT +
Preference number: 6 (lower is better)
Translates to: LLIPFLPLGLNK*SPCEGANRGIS
Trigger: AGAGATCCCCCTGTTGGCTCCTTCACAAGGTGACAACTTGTTGAGGCCTAAGGGTAGAAATGGAATCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS CAA 72 bp AAGCCTGCCCTGGTGTCCCCGCTCTTAAGGAATGTCTaGATATCTCTCTCATCCTTTGTGTTAGCATGTCAG +
Preference number: 6 (lower is better)
Translates to: KPALVSPLLRNV*ISLSSFVLACQ
Trigger: CTGACATGCTAACACAAAGGATGAGAGAGATATCAAGACATTCCTTAAGAGCGGGGACACCAGGGCAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS TCA 72 bp GCAGACCGATGTGGGCTATTGCAGATAGCCAAAAGTTaGTGTTGTCTGTGTGACGGAAATGTAAGCCAGTTG +
Preference number: 6 (lower is better)
Translates to: ADRCGLLQIAKS*CCLCDGNVSQL
Trigger: CAACTGGCTTACATTTCCGTCACACAGACAACATCAACTTTTGGCTATCTGCAATAGCCCACATCGGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS TCA 72 bp ATTTCTACCCTTAGGCCTCAACAAGTTGTCACCTTGTaGAGGAGCCAACAGGGGGATCTCTTAACCCATTCT +
Preference number: 6 (lower is better)
Translates to: ISTLRPQQVVTL*RSQQGDLLTHS
Trigger: AGAATGGGTTAAGAGATCCCCCTGTTGGCTCCTTCACAAGGTGACAACTTGTTGAGGCCTAAGGGTAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498755.1
CDS GCA 72 bp TGCCGTTTCTCTTTGCTCAGCGACTTTAAACCCTTCTaGTTGTCCAGAACCATCATATCTGACAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: CRFSLLSDFKPF*LSRTIISDSCS
Trigger: GGAACAGCTGTCAGATATGATGGTTCTGGACAAGCAGAAGGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GGCCCAGGCCTGGATCTTGATTATGGCATCCAGGTTTaGTTTAAAATACTGCAACCACTCCAGGTAAATCTT +
Preference number: 6 (lower is better)
Translates to: GPGLDLDYGIQV*FKILQPLQVNL
Trigger: AAGATTTACCTGGAGTGGTTGCAGTATTTTAAAGCAAACCTGGATGCCATAATCAAGATCCAGGCCTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS GCA 72 bp GGTGTTGGTATGCTTCTAGTTTCTGCCGTTTCTCTTTaGTCAGCGACTTTAAACCCTTCTGCTTGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: GVGMLLVSAVSL*SATLNPSACPE
Trigger: TTCTGGACAAGCAGAAGGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGAAACTAGAAGCATACCAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp AGGTGTTGGTATGCTTCTAGTTTCTGCCGTTTCTCTTaGCTCAGCGACTTTAAACCCTTCTGCTTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: RCWYASSFCRFS*LSDFKPFCLSR
Trigger: TCTGGACAAGCAGAAGGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGAAACTAGAAGCATACCAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1
CDS CAA 72 bp CGTTTCTCTTTGCTCAGCGACTTTAAACCCTTCTGCTaGTCCAGAACCATCATATCTGACAGCTGTTCCTTA +
Preference number: 6 (lower is better)
Translates to: RFSLLSDFKPFC*SRTIISDSCSL
Trigger: TAAGGAACAGCTGTCAGATATGATGGTTCTGGACAAGCAGAAGGGTTTAAAGTCGCTGAGCAAAGAGAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361170.7
ENST00000491900.1