RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQGAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140575

Ensembl transcript IDs: ENST00000268182.10, ENST00000558003.1, ENST00000558491.1, ENST00000558957.1, ENST00000559031.1, ENST00000559674.1, ENST00000559682.1, ENST00000559809.2, ENST00000560020.1, ENST00000560373.1, ENST00000560418.1, ENST00000560733.1, ENST00000560738.1, ENST00000561086.1, ENST00000561132.5, ENST00000561461.5, ENST00000633485.1

Found 729 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTTTTGCAATGGAGCCCAGATTTCGGCGTTGGTCTGTGGTAAGCTaGCCTCCTGCTGACAGGTCAATGATGTCAAAGGCATCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: IFAMEPRFRRWSVVS*PPADRSMMSKASGA
Trigger: TGCTCCTGATGCCTTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTTACCACAGACCAACGCCGAAATCTGGGCTCCATTGCAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 90 bp GTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGTaGGCTGTAACCATGCACCTGAGTAAAGAGTCTCATAAAAATACT +
Preference number: 1 (lower is better)
Translates to: VWVVANPSMALHASL*AVTMHLSKESHKNT
Trigger: AGTATTTTTATGAGACTCTTTACTCAGGTGCATGGTTACAGCCCACAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR TCA 90 bp AGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTaGGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAT +
Preference number: 1 (lower is better)
Translates to: RSLLPMRKEGPRKEL*GASFLHPSGLAAND
Trigger: ATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR GCA 90 bp ATCTCCCAGAAACATCTTATTGGAAGCAGCATGCTGAAGCATTTTTaGAATGGAGCCCAGATTTCGGCGTTGGTCTGTGGTAAGCTGGCC +
Preference number: 1 (lower is better)
Translates to: ISQKHLIGSSMLKHF*NGAQISALVCGKLA
Trigger: GGCCAGCTTACCACAGACCAACGCCGAAATCTGGGCTCCATTGCAAAAATGCTTCAGCATGCTGCTTCCAATAAGATGTTTCTGGGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR TCA 90 bp TGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATaGGGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCC +
Preference number: 1 (lower is better)
Translates to: CIRLRCCCWLGLCFQ*GKKDLERSCEVLLS
Trigger: GGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR TCA 90 bp AAGTGGGCATTATCTCCCAGAAACATCTTATTGGAAGCAGCATGCTaGAGCATTTTTGCAATGGAGCCCAGATTTCGGCGTTGGTCTGTG +
Preference number: 1 (lower is better)
Translates to: KWALSPRNILLEAAC*SIFAMEPRFRRWSV
Trigger: CACAGACCAACGCCGAAATCTGGGCTCCATTGCAAAAATGCTTCAGCATGCTGCTTCCAATAAGATGTTTCTGGGAGATAATGCCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 90 bp AAAAGGGTAACAAATGTCCCATCAGAGCGAGAGGAGTTAAAAATGTaGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGT +
Preference number: 1 (lower is better)
Translates to: KRVTNVPSEREELKM*HRECIRLRCCCWLG
Trigger: ACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGATGGGACATTTGTTACCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR CCA 90 bp CTGGTGGCTGGTGTTTCTAGGATTTCAGTCAAGGTCTCTCCTGGCTaGAACCGGATGACATCCACAATTAAACGTTTTGTATTCAGTAAG +
Preference number: 1 (lower is better)
Translates to: LVAGVSRISVKVSPG*NRMTSTIKRFVFSK
Trigger: CTTACTGAATACAAAACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACTGAAATCCTAGAAACACCAGCCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR TCA 90 bp GTGTTTCTAGGATTTCAGTCAAGGTCTCTCCTGGCTGGAACCGGATaGCATCCACAATTAAACGTTTTGTATTCAGTAAGATGGTTCGAG +
Preference number: 1 (lower is better)
Translates to: VFLGFQSRSLLAGTG*HPQLNVLYSVRWFE
Trigger: CTCGAACCATCTTACTGAATACAAAACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACTGAAATCCTAGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR TCA 90 bp CAGCTAATAAATAACAGTAATGAGAACTGTGTGGTTTCAACGCCATaGGTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTA +
Preference number: 1 (lower is better)
Translates to: QLINNSNENCVVSTP*VCWGILCATKATIL
Trigger: TAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTACTGTTATTTATTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR TCA 90 bp GTGAGGGTTACTAAATCAGAGTACTCATCCACATTAAATTTATCCTaGAGCTCTGGGACATCACAAGCAGTTTGGAAAAACCGTCTGAAT +
Preference number: 1 (lower is better)
Translates to: VRVTKSEYSSTLNLS*SSGTSQAVWKNRLN
Trigger: ATTCAGACGGTTTTTCCAAACTGCTTGTGATGTCCCAGAGCTTCAGGATAAATTTAATGTGGATGAGTACTCTGATTTAGTAACCCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR GCA 90 bp GTTTTAAAAACAATGACATTCTACATTAGGGCTAACCCATTCCTCTaGCATAGGGATGGAGTGAATTGTCTCTCTGAATCAAGTCAATCT +
Preference number: 1 (lower is better)
Translates to: VLKTMTFYIRANPFL*HRDGVNCLSESSQS
Trigger: AGATTGACTTGATTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCATTGTTTTTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR GCA 90 bp TTACTGACACATTTTATTAAAGGAGCTGTAAACTCTGCTCATTATTaGCTGTCTTGGATGTGGCCTTTGGGATTCATAGCCTCTTTTAAG +
Preference number: 1 (lower is better)
Translates to: LLTHFIKGAVNSAHY*LSWMWPLGFIASFK
Trigger: CTTAAAAGAGGCTATGAATCCCAAAGGCCACATCCAAGACAGGCAATAATGAGCAGAGTTTACAGCTCCTTTAATAAAATGTGTCAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR-3UTR GCA 90 bp CACCACGCTTCTAAGCCTCCCAAACCAAGCAGCCACTCCGCAGGTCATAGGAGGAGCACGGCTCACTGCTaGCTCGACCTCCCGGACTCA +
Preference number: 2 (lower is better)
Translates to: HHASKPPKPSSHSAGHRRSTAHC*LDLPDS
Trigger: TGAGTCCGGGAGGTCGAGGCAGCAGTGAGCCGTGCT...CCTCCTATGACCTGCGGAGTGGCTGCTTGGTTTGGGAGGCTTAGAAGCGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
3UTR-3UTR CCA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGTCAGGGACTCGATGGTaGGCACCTCGCCGAGGTCGT +
Preference number: 2 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGSGTRW*APRRGR
Trigger: ACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGA...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CAA 90 bp GTTCGAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTaGTTGGTCAGGGTGAGAGACACTTCCGTCTTAGCCAGTGCCTCC +
Preference number: 2 (lower is better)
Translates to: VRASISAFSSPGTSN*LVRVRDTSVLASAS
Trigger: GGAGGCACTGGCTAAGACGGAAGTGTCTCTCACCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTCGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CCA 90 bp GAGCAGCGTATGTCTGTTGCAGTTTCACTAGTTCGGCCTTTCTCCTCTGTCGGTCCCAGATTTCGGCGTTaGTCTGTGGTAAGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: EQRMSVAVSLVRPFSSVGPRFRR*SVVSWP
Trigger: AGGCCAGCTTACCACAGACCAACGCCGAAATCTGGG...ACCGACAGAGGAGAAAGGCCGAACTAGTGAAACTGCAACAGACATACGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CAA 90 bp CGAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTaGGTCAGGGTGAGAGACACTTCCGTCTTAGCCAGTGCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: RASISAFSSPGTSNL*VRVRDTSVLASASL
Trigger: TAAGGAGGCACTGGCTAAGACGGAAGTGTCTCTCACCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR TCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAAGCTTCCACTTCTAAATaGCACACATTTGAATCCTAC +
Preference number: 2 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQASTSK*HTFESY
Trigger: GTAGGATTCAAATGTGTGTCATTTAGAAGTGGAAGC...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR TCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAAACATTAAATTTATCCTaGAGCTCTGGGACATCACAA +
Preference number: 2 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQTLNLS*SSGTSQ
Trigger: TTGTGATGTCCCAGAGCTTCAGGATAAATTTAATGT...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTAAGGTCTCTCCTGGCTaGAACCGGATGACATCCACA +
Preference number: 2 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCKVSPG*NRMTST
Trigger: TGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTT...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR TCA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCACTCTGCATGGCTCTCTaGTGTTCTGCTTCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPLCMAL*CSASCS
Trigger: TGAACAGGAAGCAGAACATCAGAGAGCCATGCAGAG...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CCA 90 bp CTTGCAGGTCCTCAATTTCCAGAAGAACTCCTTTTTCATGTAGTCTTGCTGCTGCAGCAGTTCGTGGATTaGATCATTGTGCTCCGGAGC +
Preference number: 2 (lower is better)
Translates to: LAGPQFPEELLFHVVLLLQQFVD*IIVLRS
Trigger: GCTCCGGAGCACAATGATCCAATCCACGAACTGCTG...CAGCAGCAAGACTACATGAAAAAGGAGTTCTTCTGGAAATTGAGGACCTGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR TCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCCTAGAAAGGAGCTGTaGGGTGCTTCTTTCCTTCAT +
Preference number: 2 (lower is better)
Translates to: IRARGVKNVASGVYQIEVPRKEL*GASFLH
Trigger: ATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGG...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR-3UTR GCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTTCCGTCTTAGCCAGTaGCTCCTTATTTGGGTCATT +
Preference number: 2 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCFRLSQ*LLIWVI
Trigger: AATGACCCAAATAAGGAGGCACTGGCTAAGACGGAA...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGTTTCCTTCATCCTTCTaGGCTGGCAGCAAACGATCA +
Preference number: 2 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEFPSSF*AGSKRS
Trigger: TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAA...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR-3UTR CCA 90 bp CCTATACTTATTCCCTCAACCACCAGCTTCCCAGTTACATCTATAACATACTCAGGCCTCCCAACGTGTTaGGATTACAGGCATGGACCA +
Preference number: 2 (lower is better)
Translates to: PILIPSTTSFPVTSITYSGLPTC*DYRHGP
Trigger: TGGTCCATGCCTGTAATCCCAACACGTTGGGAGGCC...TGAGTATGTTATAGATGTAACTGGGAAGCTGGTGGTTGAGGGAATAAGTATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
3UTR-3UTR CCA 90 bp CTTGCAGGTCCTCAATTTCCAGAAGAACTCCTTTTTCATGTAGTCTTGCTGCTGCTGCTTCCTGTTCACTaGTGGCTGGTGTTTCTAGGA +
Preference number: 2 (lower is better)
Translates to: LAGPQFPEELLFHVVLLLLLPVH*WLVFLG
Trigger: TCCTAGAAACACCAGCCACCAGTGAACAGGAAGCAG...CAGCAGCAAGACTACATGAAAAAGGAGTTCTTCTGGAAATTGAGGACCTGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CAA 90 bp GGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTaGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGA +
Preference number: 2 (lower is better)
Translates to: GVKNVASGVYQIEVL*LARSLLPMRKEGPR
Trigger: TCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR CAA 90 bp AAAGGCAACTATGTGCAGCAACAATCTGACGGGCAGTCCAAACTCTaGGGAGGAAGTAAATTCATGGTAAATGTCATGATGGCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: KGNYVQQQSDGQSKL*GGSKFMVNVMMAGR
Trigger: TCGACCAGCCATCATGACATTTACCATGAATTTACTTCCTCCCAAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCACATAGTTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR-3UTR TCA 90 bp CTTGCAGGTCCTCAATTTCCAGAAGAACTCCTTTTTCATGTAGTCTTGCTGCTGCCTAGAAAGGAGCTGTaGGGTGCTTCTTTCCTTCAT +
Preference number: 2 (lower is better)
Translates to: LAGPQFPEELLFHVVLLLPRKEL*GASFLH
Trigger: ATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGG...CAGCAGCAAGACTACATGAAAAAGGAGTTCTTCTGGAAATTGAGGACCTGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR GCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGAAAGGAGCTGTGAGGTaGTTCTTTCCTTCATCCTTC +
Preference number: 2 (lower is better)
Translates to: IRARGVKNVASGVYQIEVKGAVR*FFPSSF
Trigger: GAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATTGAGGTGCTGTTGTTaGCTAGGTCTTTGCTTCCAA +
Preference number: 2 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKLRCCC*LGLCFQ
Trigger: TTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR-3UTR CCA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATTGGTCTGTGGTAAGCTaGCCTCCTGCTGACAGGTCA +
Preference number: 2 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNWSVVS*PPADRS
Trigger: TGACCTGTCAGCAGGAGGCCAGCTTACCACAGACCA...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CCA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGGAGCAACAATGGCTaGATTCATGTATCGATAATA +
Preference number: 2 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPRSNNG*IHVSII
Trigger: TATTATCGATACATGAATCCAGCCATTGTTGCTCCT...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR TCA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATAAGCTGGCCTCCTGCTaGCAGGTCAATGATGTCAAA +
Preference number: 2 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNKLASC*QVNDVK
Trigger: TTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTT...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR TCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAATTTATCTGAGTAGCTaGATTTTAGCAATGGGACTC +
Preference number: 2 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKIYLSS*ILAMGL
Trigger: GAGTCCCATTGCTAAAATTCAGCTACTCAGATAAAT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
3UTR-3UTR CCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTTTTCCTTCATCCTTCTaGGCTGGCAGCAAACGATCA +
Preference number: 2 (lower is better)
Translates to: AHFTLFCISNCVEGTINLFPSSF*AGSKRS
Trigger: TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAA...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR-3UTR CCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTACATCACAAGCAGTTTaGAAAAACCGTCTGAATTTC +
Preference number: 2 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFTSQAV*KNRLNF
Trigger: GAAATTCAGACGGTTTTTCCAAACTGCTTGTGATGT...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR TCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTGGTCTTTGCTTCCAATaGGGAAAGAAGGACCTAGAA +
Preference number: 2 (lower is better)
Translates to: AHFTLFCISNCVEGTINLGLCFQ*GKKDLE
Trigger: TTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACC...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR-3UTR GCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTTCAAGTCAATCTCTGTaGACCAACAAAAACAGGCAG +
Preference number: 2 (lower is better)
Translates to: AHFTLFCISNCVEGTINLSSQSL*TNKNRQ
Trigger: CTGCCTGTTTTTGTTGGTGCACAGAGATTGACTTGA...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR CCA 72 bp ATGGTGGGCACCTCGCCGAGGTCGTCCAGCAGTTCGTaGATTGGATCATTGTGCTCCGGAGCAATGGCATCC +
Preference number: 3 (lower is better)
Translates to: MVGTSPRSSSSS*IGSLCSGAMAS
Trigger: GGATGCCATTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGGTGCCCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 72 bp AATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTaGGCACCTCGCCGAGGTCGTCCAGCAGTTCGTGGA +
Preference number: 3 (lower is better)
Translates to: NCQSFPLSGTRW*APRRGRPAVRG
Trigger: TCCACGAACTGCTGGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 72 bp TTAAATTGCCAGAGCTTTCCCCTATCAGGGACTCGATaGTGGGCACCTCGCCGAGGTCGTCCAGCAGTTCGT +
Preference number: 3 (lower is better)
Translates to: LNCQSFPLSGTR*WAPRRGRPAVR
Trigger: ACGAACTGCTGGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 72 bp GTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGTaGGCTGTAACCATGCACCTGAGTAAAGAGTCTCAT +
Preference number: 3 (lower is better)
Translates to: VANPSMALHASL*AVTMHLSKESH
Trigger: ATGAGACTCTTTACTCAGGTGCATGGTTACAGCCCACAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR CCA 72 bp ATGGAGCCCAGATTTCGGCGTTGGTCTGTGGTAAGCTaGCCTCCTGCTGACAGGTCAATGATGTCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: MEPRFRRWSVVS*PPADRSMMSKA
Trigger: TGCCTTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTTACCACAGACCAACGCCGAAATCTGGGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CAA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCTTGTTGGCTAGGTCTTaGCTTCCAATGAGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVLLARS*LPMRKE
Trigger: TTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CAA 90 bp CTGACTCTGAATATTGCCAAACAGATGGACCTACACCAACAGCACCACGCTTCTCGGCCTCCCAACGTGTaGGGATTACAGGCATGGACC +
Preference number: 3 (lower is better)
Translates to: LTLNIAKQMDLHQQHHASRPPNV*GLQAWT
Trigger: GGTCCATGCCTGTAATCCCAACACGTTGGGAGGCCG...AGAAGCGTGGTGCTGTTGGTGTAGGTCCATCTGTTTGGCAATATTCAGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
3UTR TCA 72 bp ATTTCGGCGTTGGTCTGTGGTAAGCTGGCCTCCTGCTaGCAGGTCAATGATGTCAAAGGCATCAGGAGCAAC +
Preference number: 3 (lower is better)
Translates to: ISALVCGKLASC*QVNDVKGIRSN
Trigger: GTTGCTCCTGATGCCTTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTTACCACAGACCAACGCCGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR TCA 72 bp ACTAGTTCGGCCTTTCTCCTCTGTCGGTACCTCCGCTaGTTCCGAATATCCCTGGCAATGTCGTTGATCAGT +
Preference number: 3 (lower is better)
Translates to: TSSAFLLCRYLR*FRISLAMSLIS
Trigger: ACTGATCAACGACATTGCCAGGGATATTCGGAATCAGCGGAGGTACCGACAGAGGAGAAAGGCCGAACTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CAA 90 bp GATGCTGACTCTGAATATTGCCAAACAGATGGACCTACACCAACAGCACCACGCATTTCCACCCCACAGTaGGTAACGCCCAAAACATGC +
Preference number: 3 (lower is better)
Translates to: DADSEYCQTDGPTPTAPRISTPQ*VTPKTC
Trigger: GCATGTTTTGGGCGTTACCAACTGTGGGGTGGAAAT...GCGTGGTGCTGTTGGTGTAGGTCCATCTGTTTGGCAATATTCAGAGTCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559809.2
3UTR TCA 72 bp CTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTaGGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: LPMRKEGPRKEL*GASFLHPSGLA
Trigger: TGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR TCA 72 bp ACCTCCGCTGATTCCGAATATCCCTGGCAATGTCGTTaGTCAGTTCCTGGTATTTGTTCTTTGGGTCCACGG +
Preference number: 3 (lower is better)
Translates to: TSADSEYPWQCR*SVPGICSLGPR
Trigger: CCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGATATTCGGAATCAGCGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CAA 90 bp CTGACTCTGAATATTGCCAAACAGATGGACCTACACCAACAGCACCACGCTTCTCCAAAAACAGGAGTTTaGTCACCCAGGCTAGAGCAC +
Preference number: 3 (lower is better)
Translates to: LTLNIAKQMDLHQQHHASPKTGV*SPRLEH
Trigger: GTGCTCTAGCCTGGGTGACAAAACTCCTGTTTTTGG...AGAAGCGTGGTGCTGTTGGTGTAGGTCCATCTGTTTGGCAATATTCAGAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559809.2
3UTR TCA 72 bp TTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATaGGGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: LRCCCWLGLCFQ*GKKDLERSCEV
Trigger: CACCTCACAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR CCA 72 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTaGGCTGGCAGCAAACGATCAATTACTTCCCGTAGA +
Preference number: 3 (lower is better)
Translates to: KGAVRCFFPSSF*AGSKRSITSRR
Trigger: TCTACGGGAAGTAATTGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAACGGGAGTGTATCAGATaGAGGTGCTGTTGTTGGCTA +
Preference number: 3 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKRECIR*RCCCWL
Trigger: TAGCCAACAACAGCACCTCAATCTGATACACTCCCG...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR-3UTR CAA 90 bp CTTGCAGGTCCTCAATTTCCAGAAGAACTCCTTTTTCATGTAGTCTTGCTGCTGCCTGGTATTTGTTCTTaGGGTCCACGGTTCCAAGCT +
Preference number: 3 (lower is better)
Translates to: LAGPQFPEELLFHVVLLLPGICS*GPRFQA
Trigger: AGCTTGGAACCGTGGACCCAAAGAACAAATACCAGG...CAGCAGCAAGACTACATGAAAAAGGAGTTCTTCTGGAAATTGAGGACCTGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 72 bp TTCCGAATATCCCTGGCAATGTCGTTGATCAGTTCCTaGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCT +
Preference number: 3 (lower is better)
Translates to: FRISLAMSLISS*YLFFGSTVPSS
Trigger: AGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGATATTCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CAA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTTTGGGTCATTTAAATaGCCAGAGCTTTCCCCTATC +
Preference number: 3 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCFGSFK*PELSPI
Trigger: GATAGGGGAAAGCTCTGGCAATTTAAATGACCCAAA...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATCCCTGGCAATGTCGTaGATCAGTTCCTGGTATTTG +
Preference number: 3 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKSLAMS*ISSWYL
Trigger: CAAATACCAGGAACTGATCAACGACATTGCCAGGGA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR GCA 72 bp AAACATCTTATTGGAAGCAGCATGCTGAAGCATTTTTaGAATGGAGCCCAGATTTCGGCGTTGGTCTGTGGT +
Preference number: 3 (lower is better)
Translates to: KHLIGSSMLKHF*NGAQISALVCG
Trigger: ACCACAGACCAACGCCGAAATCTGGGCTCCATTGCAAAAATGCTTCAGCATGCTGCTTCCAATAAGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 72 bp ACAAATGTCCCATCAGAGCGAGAGGAGTTAAAAATGTaGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGT +
Preference number: 3 (lower is better)
Translates to: TNVPSEREELKM*HRECIRLRCCC
Trigger: ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGATGGGACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR-3UTR CAA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATCGGGAGTGTATCAGATaGAGGTGCTGTTGTTGGCTA +
Preference number: 3 (lower is better)
Translates to: VCWGILCATKATILYHHHRECIR*RCCCWL
Trigger: TAGCCAACAACAGCACCTCAATCTGATACACTCCCG...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR TCA 72 bp AATAACAGTAATGAGAACTGTGTGGTTTCAACGCCATaGGTTTGTTGGGGCATCCTCTGTGCTACTAAAGCC +
Preference number: 3 (lower is better)
Translates to: NNSNENCVVSTP*VCWGILCATKA
Trigger: GGCTTTAGTAGCACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTACTGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR TCA 72 bp TTATCTCCCAGAAACATCTTATTGGAAGCAGCATGCTaGAGCATTTTTGCAATGGAGCCCAGATTTCGGCGT +
Preference number: 3 (lower is better)
Translates to: LSPRNILLEAAC*SIFAMEPRFRR
Trigger: ACGCCGAAATCTGGGCTCCATTGCAAAAATGCTTCAGCATGCTGCTTCCAATAAGATGTTTCTGGGAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CCA 72 bp GGTGTTTCTAGGATTTCAGTCAAGGTCTCTCCTGGCTaGAACCGGATGACATCCACAATTAAACGTTTTGTA +
Preference number: 3 (lower is better)
Translates to: GVSRISVKVSPG*NRMTSTIKRFV
Trigger: TACAAAACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACTGAAATCCTAGAAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR TCA 72 bp GGATTTCAGTCAAGGTCTCTCCTGGCTGGAACCGGATaGCATCCACAATTAAACGTTTTGTATTCAGTAAGA +
Preference number: 3 (lower is better)
Translates to: GFQSRSLLAGTG*HPQLNVLYSVR
Trigger: TCTTACTGAATACAAAACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACTGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR TCA 72 bp GGAAAACCGTTCAGTACACTTAAATGCCCATCACAGTaGTTCATGATAAACTCTCATCAAGGCTACTTATTG +
Preference number: 3 (lower is better)
Translates to: GKPFSTLKCPSQ*FMINSHQGYLL
Trigger: CAATAAGTAGCCTTGATGAGAGTTTATCATGAATCACTGTGATGGGCATTTAAGTGTACTGAACGGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559809.2
3UTR CCA 72 bp GTCAATGATGTCAAAGGCATCAGGAGCAACAATGGCTaGATTCATGTATCGATAATAAAGCAAGTTACCAAT +
Preference number: 3 (lower is better)
Translates to: VNDVKGIRSNNG*IHVSIIKQVTN
Trigger: ATTGGTAACTTGCTTTATTATCGATACATGAATCCAGCCATTGTTGCTCCTGATGCCTTTGACATCATTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR TCA 72 bp ACTAAATCAGAGTACTCATCCACATTAAATTTATCCTaGAGCTCTGGGACATCACAAGCAGTTTGGAAAAAC +
Preference number: 3 (lower is better)
Translates to: TKSEYSSTLNLS*SSGTSQAVWKN
Trigger: GTTTTTCCAAACTGCTTGTGATGTCCCAGAGCTTCAGGATAAATTTAATGTGGATGAGTACTCTGATTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCCCACGGCAGCGAGCCTaGAGCCTGGTGATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSPRQRA*SLVIRP
Trigger: AGGCCTGATCACCAGGCTGCAGGCTCGCTGCCGTGG...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCACTCCTCTCGCTGGTTaGACGCGTAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSTPLAG*TRSCRV
Trigger: CACTCTACAACTACGCGTCCAACCAGCGAGAGGAGT...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CAA 72 bp TGGGCACCTCGCCGAGGTCGTCCAGCAGTTCGTGGATaGGATCATTGTGCTCCGGAGCAATGGCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: WAPRRGRPAVRG*DHCAPEQWHPG
Trigger: ACCAGGATGCCATTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCCACCACACTCAGGGATaGCTCCATACAAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSHHTQG*LHTSQH
Trigger: ATGTTGGCTTGTATGGAGTCATCCCTGAGTGTGGTG...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCTTCACTTCTTCATaGGCTAGCGCCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVVFTSS*ASACSG
Trigger: CCCTGAGCAGGCGCTAGCTCATGAAGAAGTGAAGAC...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCCAGTCGCTATTCTGTTaGTGCAGTCCTCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVQSLFC*CSPRSP
Trigger: GGGGCTTCGAGGACTGCAGCAACAGAATAGCGACTG...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAACGTCTGCGGCGGACATaGCGGACGAGCCCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQRLRRT*RTSPSL
Trigger: GAGACTCGGGCTCGTCCGCCATGTCCGCCGCAGACG...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCAGAAGTTCCCCAGTTTaGCAAGGTAGACCCCATTCC +
Preference number: 4 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSRSSPV*QGRPHS
Trigger: GGAATGGGGTCTACCTTGCCAAACTGGGGAACTTCT...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCAAGCTGGCCTCCTGCTaGCAGGTCAATGATGTCAAA +
Preference number: 4 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVKLASC*QVNDVK
Trigger: TTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTT...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCCACGGCAGCGAGCCTaGAGCCTGGTGATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFPRQRA*SLVIRP
Trigger: AGGCCTGATCACCAGGCTGCAGGCTCGCTGCCGTGG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCGTCTGCGGCGGACATaGCGGACGAGCCCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLRLRRT*RTSPSL
Trigger: GAGACTCGGGCTCGTCCGCCATGTCCGCCGCAGACG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTCAGGGACTCGATGGTaGGCACCTCGCCGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWSGTRW*APRRGR
Trigger: ACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAAAGTCAAGGTCTCTCCTaGCTGGAACCGGATGACATC +
Preference number: 4 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQSQGLS*LEPDDI
Trigger: GATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACT...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGAGCCCGAGTCTCTGCTaGGGAAGCCGTGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLSPSLC*GSRETL
Trigger: CAAGGTTTCACGGCTTCCTCAGCAGAGACTCGGGCT...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCAGAGCTCTGGGTGGGTaGGATTATGTTCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVRALGG*DYVQDF
Trigger: AAAGTCCTGAACATAATCTCACCCACCCAGAGCTCT...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGCCTCTCCACTGTGACTaGATGCAGGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLPLHCD*MQVMAG
Trigger: CCCTGCCATCACCTGCATTCAGTCACAGTGGAGAGG...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCACCTCTCCACTGTGACTaGATGCAGGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSPLHCD*MQVMAG
Trigger: CCCTGCCATCACCTGCATTCAGTCACAGTGGAGAGG...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAAAGGTCAAGCTCCTCCTaGAAATCCTGGTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQRSSSS*KSWSLW
Trigger: CCAAAGTGACCAGGATTTTCAGGAGGAGCTTGACCT...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCCCGTCAACCTCGTCTaGGGCGGACATGGCGGACGA +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLPVNLV*GGHGGR
Trigger: TCGTCCGCCATGTCCGCCGCAGACGAGGTTGACGGG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTCGTCTGCGGCGGACATaGCGGACGAGCCCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSRLRRT*RTSPSL
Trigger: GAGACTCGGGCTCGTCCGCCATGTCCGCCGCAGACG...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCTCAGTGTGTCTAAAGTaGAGGCCAGTCGCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVSVCLK*RPVALY
Trigger: ATACAAGGCGACTGGCCTCCACTTTAGACACACTGA...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCTGGTCCACGCAAGCTTaGATATCATTCCATGTAATG +
Preference number: 4 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSWSTQA*ISFHVM
Trigger: CATTACATGGAATGATATCCAAGCTTGCGTGGACCA...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCACAGCTGACTCATCCTaGATTTCCTGGGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVTADSS*ISWAFS
Trigger: AGAGAAAGCCCAGGAAATCCAGGATGAGTCAGCTGT...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGACTATCAGGGACTCGATaGTGGGCACCTCGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRLSGTR*WAPRRG
Trigger: ACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAG...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAGATCAGGGCCACCGATaGCAACATCTCCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRDQGHR*QHLHCD
Trigger: GTCGCAGTGGAGATGTTGTCATCGGTGGCCCTGATC...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCCTCTCCACTGTGACTaGATGCAGGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWPLHCD*MQVMAG
Trigger: CCCTGCCATCACCTGCATTCAGTCACAGTGGAGAGG...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCCCGTCAACCTCGTCTaGGGCGGACATGGCGGACGA +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVPVNLV*GGHGGR
Trigger: TCGTCCGCCATGTCCGCCGCAGACGAGGTTGACGGG...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGTCAGGACTTTGTCGCTaGAGGGTAGCCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLSGLCR*RVASSF
Trigger: GAAGGAGCTGGCTACCCTGCAGCGACAAAGTCCTGA...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTGTCTCAGGGCATTCTaGCCACGGGCACCACGGTTG +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFCLRAF*PRAPRL
Trigger: CAACCGTGGTGCCCGTGGCCAGAATGCCCTGAGACA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAACTGCTGAGGAAGCCGTaGAACCTTGGAGGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: IRANPFLCHRDGVNCLSELLRKP*NLGGAD
Trigger: GTCCGCGCCTCCAAGGTTTCACGGCTTCCTCAGCAG...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCTGCTGAGGAAGCCGTaGAACCTTGGAGGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCLLRKP*NLGGAD
Trigger: GTCCGCGCCTCCAAGGTTTCACGGCTTCCTCAGCAG...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGCTGCTGAGGAAGCCGTaGAACCTTGGAGGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELLLRKP*NLGGAD
Trigger: GTCCGCGCCTCCAAGGTTTCACGGCTTCCTCAGCAG...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGAGCCTGCAGCCTGGTaGTCAGGCCTTCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLEPAAW*SGLHWP
Trigger: TGGCCAATGAAGGCCTGATCACCAGGCTGCAGGCTC...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTGAGCCTGCAGCCTGGTaGTCAGGCCTTCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCEPAAW*SGLHWP
Trigger: TGGCCAATGAAGGCCTGATCACCAGGCTGCAGGCTC...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCAGCCCGCATGTTCCTaGTGGAGCTGTCTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLQPACS*WSCLAV
Trigger: CACGGCTAGACAGCTCCATCAGGAACATGCGGGCTG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTCAGCCCGCATGTTCCTaGTGGAGCTGTCTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCQPACS*WSCLAV
Trigger: CACGGCTAGACAGCTCCATCAGGAACATGCGGGCTG...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAAGGTCTTTGCTTCCAATaGGGAAAGAAGGACCTAGAA +
Preference number: 4 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQGLCFQ*GKKDLE
Trigger: TTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACC...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTGGTAGCTACAGCTCCTaGCAAGTGCGCGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCGSYSS*QVRGLA
Trigger: GGCAAGCCCGCGCACTTGGCAGGAGCTGTAGCTACC...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATCCCGTCAACCTCGTCTaGGGCGGACATGGCGGACGA +
Preference number: 4 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNPVNLV*GGHGGR
Trigger: TCGTCCGCCATGTCCGCCGCAGACGAGGTTGACGGG...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCATGCTGAAGCATTTTTaGAATGGAGCCCAGATTTCG +
Preference number: 4 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVMLKHF*NGAQIS
Trigger: CGAAATCTGGGCTCCATTGCAAAAATGCTTCAGCAT...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAATGCAAATGTGTCGGCTaGAATTCTACGGTCAATAGC +
Preference number: 4 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQCKCVG*NSTVNS
Trigger: GCTATTGACCGTAGAATTCCAGCCGACACATTTGCA...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTACACCTGGGGCAGCTaGGCTTCGGGATTCATCAGT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWYTWGS*ASGFIS
Trigger: ACTGATGAATCCCGAAGCCCAGCTGCCCCAGGTGTA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGACTCCTCTCGCTGGTTaGACGCGTAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLTPLAG*TRSCRV
Trigger: CACTCTACAACTACGCGTCCAACCAGCGAGAGGAGT...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTCAGGGACTCGATGGTaGGCACCTCGCCGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVSGTRW*APRRGR
Trigger: ACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTCAGGGACTCGATGGTaGGCACCTCGCCGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELSGTRW*APRRGR
Trigger: ACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAAAGGTCTCTCCTGGCTaGAACCGGATGACATCCACA +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSKVSPG*NRMTST
Trigger: TGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTT...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CAGCACCACGCTTCTAAGCCTCCCAAACCAAGCAGCCACTCCGCAGGTCATAGGATATTGCCAAACAGATaGACCTACACCAACAGCACC +
Preference number: 4 (lower is better)
Translates to: QHHASKPPKPSSHSAGHRILPNR*TYTNST
Trigger: GGTGCTGTTGGTGTAGGTCCATCTGTTTGGCAATAT...CCTATGACCTGCGGAGTGGCTGCTTGGTTTGGGAGGCTTAGAAGCGTGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS-3UTR TCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGAGCCCGAGTCTCTGCTaGGGAAGCCGTGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLSPSLC*GSRETL
Trigger: CAAGGTTTCACGGCTTCCTCAGCAGAGACTCGGGCT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGATTCCAATGCCCTGTTaGTCAGGGCCACCGATGACA +
Preference number: 4 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGIPMPC*SGPPMT
Trigger: TGTCATCGGTGGCCCTGATCAACAGGGCATTGGAAT...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGAGCCTGCAGCCTGGTaGTCAGGCCTTCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELEPAAW*SGLHWP
Trigger: TGGCCAATGAAGGCCTGATCACCAGGCTGCAGGCTC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGTGTGCAGCAACAATCTaGCGGGCAGTCCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLCAATI*RAVQTL
Trigger: AAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCACA...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGGTAGCTACAGCTCCTaGCAAGTGCGCGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKGSYSS*QVRGLA
Trigger: GGCAAGCCCGCGCACTTGGCAGGAGCTGTAGCTACC...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAAGGCAGGCATCTGGATaGCATACTTCTCCAACTCAG +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSRQASG*HTSPTQ
Trigger: CTGAGTTGGAGAAGTATGGCATCCAGATGCCTGCCT...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAATGCAGCATTAATCAGTaGTACTGCTGCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQCSINQ*YCCQSS
Trigger: AGAAGATTGGCAGCAGTAGCACTGATTAATGCTGCA...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCACTGTTCTCGGTTATATaGGGCAGTCACCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSLFSVI*GSHPRD
Trigger: ATCTCTGGGGTGACTGCCGCATATAACCGAGAACAG...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGAGATCGGCGGCAAATaGATACACCTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLEIGGK*IHLGQL
Trigger: CAGCTGCCCCAGGTGTATCCATTTGCCGCCGATCTC...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTGGTCTGTGGTAAGCTaGCCTCCTGCTGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFWSVVS*PPADRS
Trigger: TGACCTGTCAGCAGGAGGCCAGCTTACCACAGACCA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCTATCAGGGACTCGATaGTGGGCACCTCGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKLSGTR*WAPRRG
Trigger: ACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAAAGGTCTCTCCTGGCTaGAACCGGATGACATCCACA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQKVSPG*NRMTST
Trigger: TGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAAGTCAAGGTCTCTCCTaGCTGGAACCGGATGACATC +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRSQGLS*LEPDDI
Trigger: GATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTGCAGGGGGTCAGTCTaGCCACTCTGTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVCRGSV*PLCLFC
Trigger: GCAGAAGAGACAGAGTGGTCAGACTGACCCCCTGCA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGGATCAGGGCCACCGATaGCAACATCTCCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVDQGHR*QHLHCD
Trigger: GTCGCAGTGGAGATGTTGTCATCGGTGGCCCTGATC...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAACACCACACTCAGGGATaGCTCCATACAAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQHHTQG*LHTSQH
Trigger: ATGTTGGCTTGTATGGAGTCATCCCTGAGTGTGGTG...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGCTGGCTGGAACCGGATaGCATCCACAATTAAACGTT +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLLAGTG*HPQLNV
Trigger: AACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAG...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTGTCGGTACCTCCGCTaGTTCCGAATATCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLCRYLR*FRISLA
Trigger: TGCCAGGGATATTCGGAATCAGCGGAGGTACCGACA...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTCGCTATTCTGTTGCTaGAGTCCTCGAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCSLFCC*SPRSPR
Trigger: CCTGGGGCTTCGAGGACTGCAGCAACAGAATAGCGA...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGCAGTCGCTATTCTGTTaGTGCAGTCCTCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVQSLFC*CSPRSP
Trigger: GGGGCTTCGAGGACTGCAGCAACAGAATAGCGACTG...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGTCAGGACTTTGTCGCTaGAGGGTAGCCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLSGLCR*RVASSF
Trigger: GAAGGAGCTGGCTACCCTGCAGCGACAAAGTCCTGA...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAATGCTGGGCCACTTCTaGAAGGACTCCCTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRMLGHF*KDSLKF
Trigger: AAACTTGAGGGAGTCCTTGCAGAAGTGGCCCAGCAT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAAGGTCATTCTCCAGCTaGTGGTTAGAACGAATGAGG +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSRSFSS*WLERMR
Trigger: CCTCATTCGTTCTAACCAGCAGCTGGAGAATGACCT...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGTCAGGGAACTTCTCATaGAACGAGTCCTTCAGCACT +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLSGNFS*NESFST
Trigger: AGTGCTGAAGGACTCGTTGCATGAGAAGTTCCCTGA...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCATTGTGCTCCGGAGCAATTGGGTCATTTAAATTaGCAGAGCTTTCCCCTATCA +
Preference number: 4 (lower is better)
Translates to: PRRGRPAVRGLDHCAPEQLGHLN*QSFPLS
Trigger: TGATAGGGGAAAGCTCTGGCAATTTAAATGACCCAA...TTGCTCCGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCCTCCAGTTCTGTGGTaGGAGGCAGATCTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLPPVLW*EADLPL
Trigger: TAGGGGAAGATCTGCCTCCCACCACAGAACTGGAGG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGCAAATGGATACACCTaGGGCAGCTGGGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELANGYT*GSWASG
Trigger: TCCCGAAGCCCAGCTGCCCCAGGTGTATCCATTTGC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGGCAAATGGATACACCTaGGGCAGCTGGGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEANGYT*GSWASG
Trigger: TCCCGAAGCCCAGCTGCCCCAGGTGTATCCATTTGC...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTGAGATCGGCGGCAAATaGATACACCTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSEIGGK*IHLGQL
Trigger: CAGCTGCCCCAGGTGTATCCATTTGCCGCCGATCTC...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAACAGAGAGCTCTGGGTaGGTGAGATTATGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSTESSG*VRLCSG
Trigger: TCCTGAACATAATCTCACCCACCCAGAGCTCTCTGT...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCCCAGATTTCGGCGTTaGTCTGTGGTAAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLPRFRR*SVVSWP
Trigger: AGGCCAGCTTACCACAGACCAACGCCGAAATCTGGG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAGCAGTTCGTGGATTaGATCATTGTGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFQQFVD*IIVLRS
Trigger: GCTCCGGAGCACAATGATCCAATCCACGAACTGCTG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTCCATGCCTCCCTGTaGGCTGTAACCATGCACCTG +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKELHASL*AVTMHL
Trigger: CAGGTGCATGGTTACAGCCCACAGGGAGGCATGGAG...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp CTGAATATTGCCAAACAGATGGACCTACACCAACAGCACCACGCTTCTAAGCCTGGCCTCCCAACGTGTTaGGATTACAGGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: LNIAKQMDLHQQHHASKPGLPTC*DYRHGP
Trigger: TGGTCCATGCCTGTAATCCCAACACGTTGGGAGGCC...AGGCTTAGAAGCGTGGTGCTGTTGGTGTAGGTCCATCTGTTTGGCAATATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
3UTR CAA 72 bp TCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTaGTTGGTCAGGGTGAGAGACACTTCCGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: SISAFSSPGTSN*LVRVRDTSVLA
Trigger: GGCTAAGACGGAAGTGTCTCTCACCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAGCTGCCAATCTTCTCTaGTATTGCTGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPAANLL*YCWAAL
Trigger: CAGTGCTGCCCAGCAATATCAGAGAAGATTGGCAGC...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGATTCCAATGCCCTGTTaGTCAGGGCCACCGATGACA +
Preference number: 4 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVIPMPC*SGPPMT
Trigger: TGTCATCGGTGGCCCTGATCAACAGGGCATTGGAAT...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCCTTGCTCAAAGCCTTaGGACCTCCCTTCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWPCSKP*DLPSVY
Trigger: ATAAACAGAAGGGAGGTCTCAAGGCTTTGAGCAAGG...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTGTCTTCACTTCTTCATaGGCTAGCGCCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSVFTSS*ASACSG
Trigger: CCCTGAGCAGGCGCTAGCTCATGAAGAAGTGAAGAC...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTCAGCACTTTGGCAATaGAGCGCATCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFSALWQ*SASHKG
Trigger: TCCCTTATGGGATGCGCTTCATTGCCAAAGTGCTGA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCAAGCTGGCCTCCTGCTaGCAGGTCAATGATGTCAAA +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFKLASC*QVNDVK
Trigger: TTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTT...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGACTGGCTGGAACCGGATaGCATCCACAATTAAACGTT +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRLAGTG*HPQLNV
Trigger: AACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAG...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGTCGGTACCTCCGCTaGTTCCGAATATCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCCRYLR*FRISLA
Trigger: TGCCAGGGATATTCGGAATCAGCGGAGGTACCGACA...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAACCTAGAAAGGAGCTGTaGGGTGCTTCTTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQPRKEL*GASFLH
Trigger: ATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGG...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GAGCAGCGTATGTCTGTTGCAGTTTCACTAGTTCGGCCTTTCTCCTCTGTCGGTCCTAGAAAGGAGCTGTaGGGTGCTTCTTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: EQRMSVAVSLVRPFSSVGPRKEL*GASFLH
Trigger: ATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGG...ACCGACAGAGGAGAAAGGCCGAACTAGTGAAACTGCAACAGACATACGCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGTGGTTTCAACGCCATaGGTTTGTTGGGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLVVSTP*VCWGIL
Trigger: GAGGATGCCCCAACAAACTCATGGCGTTGAAACCAC...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTCGCTATTCTGTTGCTaGAGTCCTCGAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSSLFCC*SPRSPR
Trigger: CCTGGGGCTTCGAGGACTGCAGCAACAGAATAGCGA...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCTGGGCAGCACTGTTTaGAGCATCCACTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKLGSTV*SIHSRL
Trigger: CAGTCTGGAGTGGATGCTGCAAACAGTGCTGCCCAG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCCTGGGCAGCACTGTTTaGAGCATCCACTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSLGSTV*SIHSRL
Trigger: CAGTCTGGAGTGGATGCTGCAAACAGTGCTGCCCAG...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCTCTCATGTTCCTCTTaGACCACCAGGTTCACATGG +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFLSCSS*TTRFTW
Trigger: CCATGTGAACCTGGTGGTGCAAGAGGAACATGAGAG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCATGCTGGGCCACTTCTaGAAGGACTCCCTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFMLGHF*KDSLKF
Trigger: AAACTTGAGGGAGTCCTTGCAGAAGTGGCCCAGCAT...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CATGGTAAATGTCATGATGGCTGGTCGAGGAGAAGGTCAAAGGAGGAGAGAGAGCTGTTCTCGGTTATATaGGGCAGTCACCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: HGKCHDGWSRRRSKEERELFSVI*GSHPRD
Trigger: ATCTCTGGGGTGACTGCCGCATATAACCGAGAACAG...CTCTCTCTCCTCCTTTGACCTTCTCCTCGACCAGCCATCATGACATTTACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCTGTTCTCGGTTATATaGGGCAGTCACCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFLFSVI*GSHPRD
Trigger: ATCTCTGGGGTGACTGCCGCATATAACCGAGAACAG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp CATGGTAAATGTCATGATGGCTGGTCGAGGAGAAGGTCAAAGGAGGAGAGAGAGATAGGGCAGTTTGCTTaGCTCTCCTGTCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: HGKCHDGWSRRRSKEEREIGQFA*LSCLRL
Trigger: GAGTCTCAGACAGGAGAGGCAAGCAAACTGCCCTAT...CTCTCTCTCCTCCTTTGACCTTCTCCTCGACCAGCCATCATGACATTTACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATCAGGGAACTTCTCATaGAACGAGTCCTTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQSGNFS*NESFST
Trigger: AGTGCTGAAGGACTCGTTGCATGAGAAGTTCCCTGA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCATTCCGTCTTAGCCAGTaGCTCCTTATTTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSFRLSQ*LLIWVI
Trigger: AATGACCCAAATAAGGAGGCACTGGCTAAGACGGAA...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTCGAGCATCCATTTCTaGATTCTCATCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWSSIHF*ILISRH
Trigger: GTGCCTGGAGATGAGAATGCAGAAATGGATGCTCGA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGGGCTCTCTGATGTTCTaGTTCCTGTTCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLGSLMF*FLFTGG
Trigger: GCCACCAGTGAACAGGAAGCAGAACATCAGAGAGCC...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTTCCATGGCACTCCATaGCTCCCTGTGGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCFHGTP*LPVGCN
Trigger: GTTACAGCCCACAGGGAGGCATGGAGTGCCATGGAA...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCCCTCCAGTTCTGTGGTaGGAGGCAGATCTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSPPVLW*EADLPL
Trigger: TAGGGGAAGATCTGCCTCCCACCACAGAACTGGAGG...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATCAGGGACACTACTTTaGGAGAGAAGAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQSGTLL*ERRSSP
Trigger: TGGGGAACTTCTTCTCTCCCAAAGTAGTGTCCCTGA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGGCCTGCAGAGTCTTTTaGGCATCACCTTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLACRVF*ASPSSR
Trigger: CCTGGATGAAGGTGATGCCCAAAAGACTCTGCAGGC...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAACAGCTGACTCATCCTaGATTTCCTGGGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRTADSS*ISWAFS
Trigger: AGAGAAAGCCCAGGAAATCCAGGATGAGTCAGCTGT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGTCATTCTCCAGCTGCTaGTTAGAACGAATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGSFSSC*LERMRV
Trigger: CACCCTCATTCGTTCTAACCAGCAGCTGGAGAATGA...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTGGTCTGTGGTAAGCTaGCCTCCTGCTGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELWSVVS*PPADRS
Trigger: TGACCTGTCAGCAGGAGGCCAGCTTACCACAGACCA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCCCAGATTTCGGCGTTaGTCTGTGGTAAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKPRFRR*SVVSWP
Trigger: AGGCCAGCTTACCACAGACCAACGCCGAAATCTGGG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGTTCATCCTTCTGGGCTaGCAGCAAACGATCAATTAC +
Preference number: 4 (lower is better)
Translates to: KNKVWVVANPSMALHASLFILLG*QQTINY
Trigger: GTAATTGATCGTTTGCTGCCAGCCCAGAAGGATGAA...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATTTCCTTCATCCTTCTaGGCTGGCAGCAAACGATCA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQFPSSF*AGSKRS
Trigger: TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGTTTCCTTCATCCTTCTaGGCTGGCAGCAAACGATCA +
Preference number: 4 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGFPSSF*AGSKRS
Trigger: TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAA...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTGGCGAATCCTTCCATaGCACTCCATGCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELWRILP*HSMPPC
Trigger: ACAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR CAA 72 bp ATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTaGGTCAGGGTGAGAGACACTTCCGTCTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: ISAFSSPGTSNL*VRVRDTSVLAS
Trigger: ACTGGCTAAGACGGAAGTGTCTCTCACCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGGAATTTCAGCTTGCGTaGGCAGCTCCTCATAAACAT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWEFQLA*AAPHKH
Trigger: ATGTTTATGAGGAGCTGCTCACGCAAGCTGAAATTC...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTGCTGCCAATCTTCTCTaGTATTGCTGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCAANLL*YCWAAL
Trigger: CAGTGCTGCCCAGCAATATCAGAGAAGATTGGCAGC...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCAGAGCTCTGGGTGGGTaGGATTATGTTCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFRALGG*DYVQDF
Trigger: AAAGTCCTGAACATAATCTCACCCACCCAGAGCTCT...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGTCTTCACTTCTTCATaGGCTAGCGCCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKVFTSS*ASACSG
Trigger: CCCTGAGCAGGCGCTAGCTCATGAAGAAGTGAAGAC...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATTTTGTCCACAGAGCTaGCAATGGCTGAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQFCPQS*QWLRET
Trigger: AGTTTCTCTCAGCCATTGTCAGCTCTGTGGACAAAA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCTCTGCATGGCTCTCTaGTGTTCTGCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLLCMAL*CSASCS
Trigger: TGAACAGGAAGCAGAACATCAGAGAGCCATGCAGAG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCTCTGCATGGCTCTCTaGTGTTCTGCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLLCMAL*CSASCS
Trigger: TGAACAGGAAGCAGAACATCAGAGAGCCATGCAGAG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCACGTAGAACTTTTTGTTaGGAAGGAAGATCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSRRTFC*EGRSGG
Trigger: ACCTCCTGATCTTCCTTCTCAACAAAAAGTTCTACG...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAGCCATAGGGATGGAGTaGATTGTCTCTCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRAIGME*IVSLNQ
Trigger: TTGATTCAGAGAGACAATTCACTCCATCCCTATGGC...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATTATCACTCAGGAGCTaGTTCAAGTACCAGTCGCTA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQLSLRS*FKYQSL
Trigger: TAGCGACTGGTACTTGAAGCAGCTCCTGAGTGATAA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCCACTCTGTCTCTTCTaGTGTTTATCACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFPLCLF*CLSLRS
Trigger: GCTCCTGAGTGATAAACAGCAGAAGAGACAGAGTGG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAGGGCACTCAGTGTTTTaGCAACATCACCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQGHSVF*QHHHFL
Trigger: TAGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCC...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp CATGGTAAATGTCATGATGGCTGGTCGAGGAGAAGGTCAAAGGAGGAGAGAGAGCCACCTTTTACCCAGTaGTTCACCCACTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: HGKCHDGWSRRRSKEEREPPFTQ*FTHLLL
Trigger: TAACAGCAAGTGGGTGAAGCACTGGGTAAAAGGTGG...CTCTCTCTCCTCCTTTGACCTTCTCCTCGACCAGCCATCATGACATTTACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAATCCCGAGCTTTGTTTaGCCGAATAAAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQIPSFV*PNKSLD
Trigger: ATCCAGGCTTTTATTCGGGCAAACAAAGCTCGGGAT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGATAGGGCAGTTTGCTTaGCTCTCCTGTCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLIGQFA*LSCLRL
Trigger: GAGTCTCAGACAGGAGAGGCAAGCAAACTGCCCTAT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGATAGGGCAGTTTGCTTaGCTCTCCTGTCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLIGQFA*LSCLRL
Trigger: GAGTCTCAGACAGGAGAGGCAAGCAAACTGCCCTAT...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAATGCTGAAGCATTTTTaGAATGGAGCCCAGATTTCG +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSMLKHF*NGAQIS
Trigger: CGAAATCTGGGCTCCATTGCAAAAATGCTTCAGCAT...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGTGGATTGGATCATTGTaGTCCGGAGCAATGGCATCC +
Preference number: 4 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVWIGSL*SGAMAS
Trigger: GGATGCCATTGCTCCGGAGCACAATGATCCAATCCA...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTGGATTGGATCATTGTaGTCCGGAGCAATGGCATCC +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLWIGSL*SGAMAS
Trigger: GGATGCCATTGCTCCGGAGCACAATGATCCAATCCA...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGTTCCGTCTTAGCCAGTaGCTCCTTATTTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGFRLSQ*LLIWVI
Trigger: AATGACCCAAATAAGGAGGCACTGGCTAAGACGGAA...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCGGCTCTCTGATGTTCTaGTTCCTGTTCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSGSLMF*FLFTGG
Trigger: GCCACCAGTGAACAGGAAGCAGAACATCAGAGAGCC...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGGCAGCGTATGTCTGTTaGAGTTTCACTAGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLAAYVC*SFTSSA
Trigger: GGCCGAACTAGTGAAACTGCAACAGACATACGCTGC...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTGCAGCGTATGTCTGTTaGAGTTTCACTAGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCAAYVC*SFTSSA
Trigger: GGCCGAACTAGTGAAACTGCAACAGACATACGCTGC...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAAAAGGAGCTGTGAGGTaGTTCTTTCCTTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQKGAVR*FFPSSF
Trigger: GAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAACAGTCGCCTTGTATCTaGTCTGTTCTCGATCATAGA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQQSPCI*SVLDHR
Trigger: TCTATGATCGAGAACAGACCAGATACAAGGCGACTG...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATGCAAATGTGTCGGCTaGAATTCTACGGTCAATAGC +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRCKCVG*NSTVNS
Trigger: GCTATTGACCGTAGAATTCCAGCCGACACATTTGCA...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTTACACCTGGGGCAGCTaGGCTTCGGGATTCATCAGT +
Preference number: 4 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFYTWGS*ASGFIS
Trigger: ACTGATGAATCCCGAAGCCCAGCTGCCCCAGGTGTA...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTTGGTCTGTGGTAAGCTaGCCTCCTGCTGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFWSVVS*PPADRS
Trigger: TGACCTGTCAGCAGGAGGCCAGCTTACCACAGACCA...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAACCCAGATTTCGGCGTTaGTCTGTGGTAAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKPRFRR*SVVSWP
Trigger: AGGCCAGCTTACCACAGACCAACGCCGAAATCTGGG...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATCCAACAGGAGAGTGTaGGTGTTGATGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQSNRRV*VLMISP
Trigger: TGGTGAAATCATCAACACCCACACTCTCCTGTTGGA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCCAGCAGTTCGTGGATTaGATCATTGTGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSQQFVD*IIVLRS
Trigger: GCTCCGGAGCACAATGATCCAATCCACGAACTGCTG...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCGTCCAGCAGTTCGTaGATTGGATCATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLSSSSS*IGSLCS
Trigger: GGAGCACAATGATCCAATCCACGAACTGCTGGACGA...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTCGTCCAGCAGTTCGTaGATTGGATCATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLSSSSS*IGSLCS
Trigger: GGAGCACAATGATCCAATCCACGAACTGCTGGACGA...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGAAGGTCTCTCCTGGCTaGAACCGGATGACATCCACA +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEKVSPG*NRMTST
Trigger: TGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTT...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTAGTCAAGGTCTCTCCTaGCTGGAACCGGATGACATC +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSSQGLS*LEPDDI
Trigger: GATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCTTCCTGTTCACTGGTaGCTGGTGTTTCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWLPVHW*LVFLGF
Trigger: AAATCCTAGAAACACCAGCCACCAGTGAACAGGAAG...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGCTGCTTCCTGTTCACTaGTGGCTGGTGTTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLLLPVH*WLVFLG
Trigger: TCCTAGAAACACCAGCCACCAGTGAACAGGAAGCAG...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCATCGTTGATCAGTTCCTaGTATTTGTTCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSSLISS*YLFFGS
Trigger: GGACCCAAAGAACAAATACCAGGAACTGATCAACGA...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAACATTATTGCCTGTCTTaGATGTGGCCTTTGGGATTC +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQHYCLS*MWPLGF
Trigger: GAATCCCAAAGGCCACATCCAAGACAGGCAATAATG...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR CAA 72 bp GTCTTAGCCAGTGCCTCCTTATTTGGGTCATTTAAATaGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: VLASASLFGSFK*PELSPIRDSMV
Trigger: CACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAATTTAAATGACCCAAATAAGGAGGCACTGGCTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATTGCAGGGGGTCAGTCTaGCCACTCTGTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VCWGILCATKATILYHHHCRGSV*PLCLFC
Trigger: GCAGAAGAGACAGAGTGGTCAGACTGACCCCCTGCA...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTTCTCTGCATGTGCCTaGGCCTTCAGTTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCFSACA*AFSFIN
Trigger: GTTGATGAAACTGAAGGCTCAGGCACATGCAGAGAA...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATGCCAGATTCCACCTTaGATTTCATCCAACCATAAC +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQCQIPP*ISSNHN
Trigger: GTTATGGTTGGATGAAATTCAAGGTGGAATCTGGCA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGTGCCAGATTCCACCTTaGATTTCATCCAACCATAAC +
Preference number: 4 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGCQIPP*ISSNHN
Trigger: GTTATGGTTGGATGAAATTCAAGGTGGAATCTGGCA...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCACCACACTCAGGGATaGCTCCATACAAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCHHTQG*LHTSQH
Trigger: ATGTTGGCTTGTATGGAGTCATCCCTGAGTGTGGTG...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAATCCTTGCCAGGGACTaGATCTTTACAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQILARD*IFTTSS
Trigger: AGATGAAGTTGTAAAGATTCAGTCCCTGGCAAGGAT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTAGGTCAAGCTCCTCCTaGAAATCCTGGTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSRSSSS*KSWSLW
Trigger: CCAAAGTGACCAGGATTTTCAGGAGGAGCTTGACCT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGATCTACCTTCGACTTaGTTTCCTCTTGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLDLPST*FPLGVL
Trigger: CAGCACTCCAAGAGGAAATCAAGTCGAAGGTAGATC...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGATCTACCTTCGACTTaGTTTCCTCTTGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLDLPST*FPLGVL
Trigger: CAGCACTCCAAGAGGAAATCAAGTCGAAGGTAGATC...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGAAGCTGGCCTCCTGCTaGCAGGTCAATGATGTCAAA +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVKLASC*QVNDVK
Trigger: TTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTTGGAAGCAGCATGCTaGAGCATTTTTGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFLEAAC*SIFAME
Trigger: CTCCATTGCAAAAATGCTTCAGCATGCTGCTTCCAA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAACTCTGCATGGCTCTCTaGTGTTCTGCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IRANPFLCHRDGVNCLSELCMAL*CSASCS
Trigger: TGAACAGGAAGCAGAACATCAGAGAGCCATGCAGAG...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTTCTCTTTCTTCTCTTaGAGAGTGAGGTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWFSFFS*RVRLLS
Trigger: AGACAGCAACCTCACTCTTCAAGAGAAGAAAGAGAA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTCCCTGGCAATGTCGTTaGTCAGTTCCTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCPWQCR*SVPGIC
Trigger: ACAAATACCAGGAACTGATCAACGACATTGCCAGGG...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAAAGGCAGGCATCTGGATaGCATACTTCTCCAACTCAG +
Preference number: 4 (lower is better)
Translates to: IRANPFLCHRDGVNCLSERQASG*HTSPTQ
Trigger: CTGAGTTGGAGAAGTATGGCATCCAGATGCCTGCCT...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCGGATTTTTCAAAGCTaGAAATGTGTCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWRIFQS*KCVGWN
Trigger: ATTCCAGCCGACACATTTGCAGCTTTGAAAAATCCG...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCCACTCTGTCTCTTCTaGTGTTTATCACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLPLCLF*CLSLRS
Trigger: GCTCCTGAGTGATAAACAGCAGAAGAGACAGAGTGG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTGGAATCTGTAGGGCCTaGAGAGTCTTTTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCGICRA*RVFWAS
Trigger: TGATGCCCAAAAGACTCTGCAGGCCCTACAGATTCC...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGGAATCTGTAGGGCCTaGAGAGTCTTTTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKGICRA*RVFWAS
Trigger: TGATGCCCAAAAGACTCTGCAGGCCCTACAGATTCC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGAGTGCTTCACCCACTTaGTGTTATTATCTCCTACTG +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWSASPT*CYYLLL
Trigger: CAGTAGGAGATAATAACAGCAAGTGGGTGAAGCACT...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAAGTGCTTCACCCACTTaGTGTTATTATCTCCTACTG +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRSASPT*CYYLLL
Trigger: CAGTAGGAGATAATAACAGCAAGTGGGTGAAGCACT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCCACCTTTTACCCAGTaGTTCACCCACTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLPPFTQ*FTHLLL
Trigger: TAACAGCAAGTGGGTGAAGCACTGGGTAAAAGGTGG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCATCCTCCCGAGAAAGCTaGATAGAATTTTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSSSRES*IEFCTK
Trigger: TTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGA...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGAGCTTGGTGCATCCTTaGCAGGGACTGAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLSLVHP*QGLNLY
Trigger: GTAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCT...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGAGGTCATTCTCCAGCTaGTGGTTAGAACGAATGAGG +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLRSFSS*WLERMR
Trigger: CCTCATTCGTTCTAACCAGCAGCTGGAGAATGACCT...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGGATTTCCTCTTGGAGTaGTGTCTTAAAGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLDFLLE*CLKEPQ
Trigger: CTGCGGCTCTTTAAGACAGCACTCCAAGAGGAAATC...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAGATTTCCTCTTGGAGTaGTGTCTTAAAGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPDFLLE*CLKEPQ
Trigger: CTGCGGCTCTTTAAGACAGCACTCCAAGAGGAAATC...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCATCAGGGAACTTCTCATaGAACGAGTCCTTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPSGNFS*NESFST
Trigger: AGTGCTGAAGGACTCGTTGCATGAGAAGTTCCCTGA...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTGGATTGGATCATTGTaGTCCGGAGCAATGGCATCC +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELWIGSL*SGAMAS
Trigger: GGATGCCATTGCTCCGGAGCACAATGATCCAATCCA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTCGAGCATCCATTTCTaGATTCTCATCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLSSIHF*ILISRH
Trigger: GTGCCTGGAGATGAGAATGCAGAAATGGATGCTCGA...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATGGCTCTCTGATGTTCTaGTTCCTGTTCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNGSLMF*FLFTGG
Trigger: GCCACCAGTGAACAGGAAGCAGAACATCAGAGAGCC...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGGCAGCGTATGTCTGTTaGAGTTTCACTAGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVAAYVC*SFTSSA
Trigger: GGCCGAACTAGTGAAACTGCAACAGACATACGCTGC...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTCAGCAACACCCTTCTaGATTGCAGCATTAATCAGT +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWSATPF*IAALIS
Trigger: ACTGATTAATGCTGCAATCCAGAAGGGTGTTGCTGA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTACCACCAGGTTCACATaGTCCACGCAAGCTTGGATA +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSTTRFT*STQAWI
Trigger: TATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTGCCTGCAGAGTCTTTTaGGCATCACCTTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFACRVF*ASPSSR
Trigger: CCTGGATGAAGGTGATGCCCAAAAGACTCTGCAGGC...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATCAGGAAATTCATCCTaGATCGGAATTCCTGTCGAA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQSGNSS*IGIPVE
Trigger: TTCGACAGGAATTCCGATCCAGGATGAATTTCCTGA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCATTCTCCAGCTGCTaGTTAGAACGAATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLSFSSC*LERMRV
Trigger: CACCCTCATTCGTTCTAACCAGCAGCTGGAGAATGA...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAACTCCTCTCGCTGGTTaGACGCGTAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKTPLAG*TRSCRV
Trigger: CACTCTACAACTACGCGTCCAACCAGCGAGAGGAGT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAACAGCAGTTCGTGGATTaGATCATTGTGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKQQFVD*IIVLRS
Trigger: GCTCCGGAGCACAATGATCCAATCCACGAACTGCTG...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTCGTCCAGCAGTTCGTaGATTGGATCATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSSSSSS*IGSLCS
Trigger: GGAGCACAATGATCCAATCCACGAACTGCTGGACGA...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCTTCCTGTTCACTaGTGGCTGGTGTTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVLLPVH*WLVFLG
Trigger: TCCTAGAAACACCAGCCACCAGTGAACAGGAAGCAG...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCTGCTTCCTGTTCACTaGTGGCTGGTGTTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCLLPVH*WLVFLG
Trigger: TCCTAGAAACACCAGCCACCAGTGAACAGGAAGCAG...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCTGGTATTTGTTCTTTaGGTCCACGGTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLLVFVL*VHGSKL
Trigger: GAGCTTGGAACCGTGGACCCAAAGAACAAATACCAG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGAGACTTTGCCCTTGCTaGCTAAGTTATCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLRLCPC*LSYPSR
Trigger: CCTGCTTGGATAACTTAGCCAGCAAGGGCAAAGTCT...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGAGACTTTGCCCTTGCTaGCTAAGTTATCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLRLCPC*LSYPSR
Trigger: CCTGCTTGGATAACTTAGCCAGCAAGGGCAAAGTCT...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTTCATCCTTCTGGGCTaGCAGCAAACGATCAATTAC +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFFILLG*QQTINY
Trigger: GTAATTGATCGTTTGCTGCCAGCCCAGAAGGATGAA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTTCCTTCATCCTTCTaGGCTGGCAGCAAACGATCA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLFPSSF*AGSKRS
Trigger: TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAA...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAGAGGAGTTAAAAATGTaGCATCGGGAGTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKREELKM*HRECIR
Trigger: TCTGATACACTCCCGATGCCACATTTTTAACTCCTC...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCTTGGGTGTCTTTGTTaGACTGCCAGATTCCACGTC +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKLGCLC*TARFHV
Trigger: GACGTGGAATCTGGCAGTCCAACAAAGACACCCAAG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560738.1
CDS-3UTR TCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAATGGCATTCAACCACTaGATCACATTATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRMAFNH*ITLSVC
Trigger: ACACACTGATAATGTGATTCAGTGGTTGAATGCCAT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTCATCGAGATACCTCTaGCAGTTTTCTTCCTCAATA +
Preference number: 4 (lower is better)
Translates to: KDLERSCEVLLSFILLGWSSRYL*QFSSSI
Trigger: TATTGAGGAAGAAAACTGTCAGAGGTATCTCGATGA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAAGTGACTGAATGCAGGTaGTGGCAGGGATTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: IRANPFLCHRDGVNCLSEVTECR*WQGFVS
Trigger: AGAAACAAATCCCTGCCATCACCTGCATTCAGTCAC...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGTGACTGAATGCAGGTaGTGGCAGGGATTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELVTECR*WQGFVS
Trigger: AGAAACAAATCCCTGCCATCACCTGCATTCAGTCAC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAAGGTCAAGCTCCTCCTaGAAATCCTGGTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKRSSSS*KSWSLW
Trigger: CCAAAGTGACCAGGATTTTCAGGAGGAGCTTGACCT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGCCTTGCTCAAAGCCTTaGGACCTCCCTTCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELPCSKP*DLPSVY
Trigger: ATAAACAGAAGGGAGGTCTCAAGGCTTTGAGCAAGG...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCCTTGCTCAAAGCCTTaGGACCTCCCTTCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVPCSKP*DLPSVY
Trigger: ATAAACAGAAGGGAGGTCTCAAGGCTTTGAGCAAGG...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTGATCTACCTTCGACTTaGTTTCCTCTTGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSDLPST*FPLGVL
Trigger: CAGCACTCCAAGAGGAAATCAAGTCGAAGGTAGATC...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTCAGCCCGCATGTTCCTaGTGGAGCTGTCTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: AHFTLFCISNCVEGTINLQPACS*WSCLAV
Trigger: CACGGCTAGACAGCTCCATCAGGAACATGCGGGCTG...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGAGAGCTGACAATGGCTaGGAGAAACTTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKRADNG*EKLVCH
Trigger: GTGACAGACAAGTTTCTCTCAGCCATTGTCAGCTCT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGAGAGCTGACAATGGCTaGGAGAAACTTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELRADNG*EKLVCH
Trigger: GTGACAGACAAGTTTCTCTCAGCCATTGTCAGCTCT...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTAGAGCTGACAATGGCTaGGAGAAACTTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSRADNG*EKLVCH
Trigger: GTGACAGACAAGTTTCTCTCAGCCATTGTCAGCTCT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGTTTTGTCCACAGAGCTaGCAATGGCTGAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLFCPQS*QWLRET
Trigger: AGTTTCTCTCAGCCATTGTCAGCTCTGTGGACAAAA...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATCAGCACTTTGGCAATaGAGCGCATCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKSALWQ*SASHKG
Trigger: TCCCTTATGGGATGCGCTTCATTGCCAAAGTGCTGA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCTGGCTGGAACCGGATaGCATCCACAATTAAACGTT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKLAGTG*HPQLNV
Trigger: AACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCCCTGGCAATGTCGTTaGTCAGTTCCTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEPWQCR*SVPGIC
Trigger: ACAAATACCAGGAACTGATCAACGACATTGCCAGGG...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGCCCTGGCAATGTCGTTaGTCAGTTCCTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELPWQCR*SVPGIC
Trigger: ACAAATACCAGGAACTGATCAACGACATTGCCAGGG...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCGTAGAACTTTTTGTTaGGAAGGAAGATCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFRRTFC*EGRSGG
Trigger: ACCTCCTGATCTTCCTTCTCAACAAAAAGTTCTACG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGCCTAGAAAGGAGCTGTaGGGTGCTTCTTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELPRKEL*GASFLH
Trigger: ATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGG...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGGGTCTTTGCTTCCAATaGGGAAAGAAGGACCTAGAA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLGLCFQ*GKKDLE
Trigger: TTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACC...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGAACAGGCAGGTGCCTTaGCCCATTCTGAATTTATCT +
Preference number: 4 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVNRQVP*PILNLS
Trigger: AGATAAATTCAGAATGGGTCAAGGCACCTGCCTGTT...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTTAAGGAAACAGGGTTaGCACACTTTGGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELLRKQG*HTLVGP
Trigger: GGGACCAACCAAAGTGTGTCAACCCTGTTTCCTTAA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CATGGTAAATGTCATGATGGCTGGTCGAGGAGAAGGTCAAAGGAGGAGAGAGAGTGCAGCATTAATCAGTaGTACTGCTGCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: HGKCHDGWSRRRSKEERECSINQ*YCCQSS
Trigger: AGAAGATTGGCAGCAGTAGCACTGATTAATGCTGCA...CTCTCTCTCCTCCTTTGACCTTCTCCTCGACCAGCCATCATGACATTTACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTCTCTCATGTTCCTCTTaGACCACCAGGTTCACATGG +
Preference number: 4 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFLSCSS*TTRFTW
Trigger: CCATGTGAACCTGGTGGTGCAAGAGGAACATGAGAG...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGGGGCACTCAGTGTTTTaGCAACATCACCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLGHSVF*QHHHFL
Trigger: TAGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCC...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGGCACTCAGTGTTTTaGCAACATCACCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLGHSVF*QHHHFL
Trigger: TAGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCC...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCCACCTTTTACCCAGTaGTTCACCCACTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKPPFTQ*FTHLLL
Trigger: TAACAGCAAGTGGGTGAAGCACTGGGTAAAAGGTGG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGAGCTTGGTGCATCCTTaGCAGGGACTGAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKSLVHP*QGLNLY
Trigger: GTAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGAGGTCATTCTCCAGCTaGTGGTTAGAACGAATGAGG +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELRSFSS*WLERMR
Trigger: CCTCATTCGTTCTAACCAGCAGCTGGAGAATGACCT...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTCGAGCATCCATTTCTaGATTCTCATCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKSSIHF*ILISRH
Trigger: GTGCCTGGAGATGAGAATGCAGAAATGGATGCTCGA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGACAAAGGCAACTATGTaGAGCAACAATCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVTKATM*SNNLTG
Trigger: GCCCGTCAGATTGTTGCTGCACATAGTTGCCTTTGT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGTGTCTTTGTTGGACTaGCAGATTCCACGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELVSLLD*QIPRLL
Trigger: AAGGAGACGTGGAATCTGGCAGTCCAACAAAGACAC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560738.1
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTCAGGGACACTACTTTaGGAGAGAAGAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKSGTLL*ERRSSP
Trigger: TGGGGAACTTCTTCTCTCCCAAAGTAGTGTCCCTGA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTCAGTGTGTCTAAAGTaGAGGCCAGTCGCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVSVCLK*RPVALY
Trigger: ATACAAGGCGACTGGCCTCCACTTTAGACACACTGA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTGTATATCCTGGTAAGTaGATGCCAAGGGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCVYPGK*MPRALQ
Trigger: TTGAAGAGCCCTTGGCATCCACTTACCAGGATATAC...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTACAGAGAGCTCTGGGTaGGTGAGATTATGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCTESSG*VRLCSG
Trigger: TCCTGAACATAATCTCACCCACCCAGAGCTCTCTGT...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTCATCCTGGATTTCCTaGGCTTTCTCTCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSSSWIS*AFSLFA
Trigger: AGCGAAGAGAGAGAAAGCCCAGGAAATCCAGGATGA...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTCAGGAAATTCATCCTaGATCGGAATTCCTGTCGAA +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFSGNSS*IGIPVE
Trigger: TTCGACAGGAATTCCGATCCAGGATGAATTTCCTGA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAATAATGTCATTTATATaGTCCCGGAAGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRIMSFI*SRKYCR
Trigger: CCTGCAGTACTTCCGGGACCATATAAATGACATTAT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTCATTCTCCAGCTGCTaGTTAGAACGAATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELSFSSC*LERMRV
Trigger: CACCCTCATTCGTTCTAACCAGCAGCTGGAGAATGA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCCAACAGGAGAGTGTaGGTGTTGATGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLSNRRV*VLMISP
Trigger: TGGTGAAATCATCAACACCCACACTCTCCTGTTGGA...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATCTATCAGGGACTCGATaGTGGGCACCTCGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNLSGTR*WAPRRG
Trigger: ACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAG...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGTATTTGTTCTTTaGGTCCACGGTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKELVFVL*VHGSKL
Trigger: GAGCTTGGAACCGTGGACCCAAAGAACAAATACCAG...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCCTGGTATTTGTTCTTTaGGTCCACGGTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSLVFVL*VHGSKL
Trigger: GAGCTTGGAACCGTGGACCCAAAGAACAAATACCAG...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTCGTTGATCAGTTCCTaGTATTTGTTCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFSLISS*YLFFGS
Trigger: GGACCCAAAGAACAAATACCAGGAACTGATCAACGA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGAGGTGCTGTTGTTaGCTAGGTCTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLLRCCC*LGLCFQ
Trigger: TTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAA...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CATGGTAAATGTCATGATGGCTGGTCGAGGAGAAGGTCAAAGGAGGAGAGAGAGTTGACACACTTTGGTTaGTCCCAGTTTTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: HGKCHDGWSRRRSKEERELTHFG*SQFLRQ
Trigger: TTGCCTCAAAAACTGGGACCAACCAAAGTGTGTCAA...CTCTCTCTCCTCCTTTGACCTTCTCCTCGACCAGCCATCATGACATTTACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATGCCTGTCTTGGATGTaGCCTTTGGGATTCATAGCC +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKCLSWM*PLGFIA
Trigger: GGCTATGAATCCCAAAGGCCACATCCAAGACAGGCA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR CAA 72 bp ATATCCCTGGCAATGTCGTTGATCAGTTCCTGGTATTaGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: ISLAMSLISSWY*FFGSTVPSSVS
Trigger: GCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGGAATTTCAGCTTGCGTaGGCAGCTCCTCATAAACAT +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVEFQLA*AAPHKH
Trigger: ATGTTTATGAGGAGCTGCTCACGCAAGCTGAAATTC...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTTGTTTATATTGCCTTaGATTTCAGCTTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFLFILP*ISACVS
Trigger: GCTCACGCAAGCTGAAATTCAAGGCAATATAAACAA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGTGTATTCACATCTCCTaGTTCCAATGCCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLCIHIS*FQCPVD
Trigger: ATCAACAGGGCATTGGAATCAGGAGATGTGAATACA...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTGTGACTGAATGCAGGTaGTGGCAGGGATTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFVTECR*WQGFVS
Trigger: AGAAACAAATCCCTGCCATCACCTGCATTCAGTCAC...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTTTTGTCCACAGAGCTaGCAATGGCTGAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELFCPQS*QWLRET
Trigger: AGTTTCTCTCAGCCATTGTCAGCTCTGTGGACAAAA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTTGGAAGCAGCATGCTaGAGCATTTTTGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCLEAAC*SIFAME
Trigger: CTCCATTGCAAAAATGCTTCAGCATGCTGCTTCCAA...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACATTAAATTTATCCTaGAGCTCTGGGACATCACAA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQTLNLS*SSGTSQ
Trigger: TTGTGATGTCCCAGAGCTTCAGGATAAATTTAATGT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTCTCTTTCTTCTCTTaGAGAGTGAGGTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLFSFFS*RVRLLS
Trigger: AGACAGCAACCTCACTCTTCAAGAGAAGAAAGAGAA...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCCATTTGAACTCCCATaGATTTGGCTTTCACTTCGA +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLPFELP*IWLSLR
Trigger: TCGAAGTGAAAGCCAAATTCATGGGAGTTCAAATGG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGCGTAGAACTTTTTGTTaGGAAGGAAGATCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLRRTFC*EGRSGG
Trigger: ACCTCCTGATCTTCCTTCTCAACAAAAAGTTCTACG...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CATGGTAAATGTCATGATGGCTGGTCGAGGAGAAGGTCAAAGGAGGAGAGAGAGGCTTCCACTTCTAAATaGCACACATTTGAATCCTAC +
Preference number: 4 (lower is better)
Translates to: HGKCHDGWSRRRSKEEREASTSK*HTFESY
Trigger: GTAGGATTCAAATGTGTGTCATTTAGAAGTGGAAGC...CTCTCTCTCCTCCTTTGACCTTCTCCTCGACCAGCCATCATGACATTTACCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGTTGGTCCCAGTTTTTaGGGCAATGCTAGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLVGPSF*GNASCN
Trigger: ATTACAACTAGCATTGCCTCAAAAACTGGGACCAAC...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATTCATCCATCTCCTCTaGAGTAAGTCTTTCATTATC +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQFIHLL*SKSFII
Trigger: GATAATGAAAGACTTACTGCAGAGGAGATGGATGAA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATTCATCCATCTCCTCTaGAGTAAGTCTTTCATTATC +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRFIHLL*SKSFII
Trigger: GATAATGAAAGACTTACTGCAGAGGAGATGGATGAA...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTATCCTGGTAAGTGGATaGCAAGGGCTCTTCAAGATT +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSILVSG*QGLFKI
Trigger: AATCTTGAAGAGCCCTTGGCATCCACTTACCAGGAT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGATCCTGGTAAGTGGATaGCAAGGGCTCTTCAAGATT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELILVSG*QGLFKI
Trigger: AATCTTGAAGAGCCCTTGGCATCCACTTACCAGGAT...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTATCACTCAGGAGCTaGTTCAAGTACCAGTCGCTA +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSLSLRS*FKYQSL
Trigger: TAGCGACTGGTACTTGAAGCAGCTCCTGAGTGATAA...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAATTAATCAGTGCTACTaGTGCCAATCTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRINQCY*CQSSLI
Trigger: TATCAGAGAAGATTGGCAGCAGTAGCACTGATTAAT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGATCCCGAGCTTTGTTTaGCCGAATAAAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVIPSFV*PNKSLD
Trigger: ATCCAGGCTTTTATTCGGGCAAACAAAGCTCGGGAT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGCTTTTTGGAGACTTTaGCCTTGCTGGCTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLAFWRL*PCWLSY
Trigger: ATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGC...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTAAAGGAGCTGTGAGGTaGTTCTTTCCTTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSKGAVR*FFPSSF
Trigger: GAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGTGTATCAGATTGAGGTaGTGTTGTTGGCTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLCIRLR*CCWLGL
Trigger: AAGACCTAGCCAACAACAGCACCTCAATCTGATACA...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTGTATCAGATTGAGGTaGTGTTGTTGGCTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLCIRLR*CCWLGL
Trigger: AAGACCTAGCCAACAACAGCACCTCAATCTGATACA...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGTATATCCTGGTAAGTaGATGCCAAGGGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELVYPGK*MPRALQ
Trigger: TTGAAGAGCCCTTGGCATCCACTTACCAGGATATAC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGTGGTCCACGCAAGCTTaGATATCATTCCATGTAATG +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLWSTQA*ISFHVM
Trigger: CATTACATGGAATGATATCCAAGCTTGCGTGGACCA...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTTCATCCTGGATTTCCTaGGCTTTCTCTCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFSSWIS*AFSLFA
Trigger: AGCGAAGAGAGAGAAAGCCCAGGAAATCCAGGATGA...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAGCCCGAATAAAAGCCTaGATTTTGATAATGTCATTT +
Preference number: 4 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSARIKA*ILIMSF
Trigger: AAATGACATTATCAAAATCCAGGCTTTTATTCGGGC...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAAGGAGCAACAATGGCTaGATTCATGTATCGATAATA +
Preference number: 4 (lower is better)
Translates to: LERSCEVLLSFILLGWQQRSNNG*IHVSII
Trigger: TATTATCGATACATGAATCCAGCCATTGTTGCTCCT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGGAAGCATTTTTGCAATaGAGCCCAGATTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVEAFLQ*SPDFGV
Trigger: AACGCCGAAATCTGGGCTCCATTGCAAAAATGCTTC...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGGAAGCATTTTTGCAATaGAGCCCAGATTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEEAFLQ*SPDFGV
Trigger: AACGCCGAAATCTGGGCTCCATTGCAAAAATGCTTC...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAACTTCCTGTTCACTGGTaGCTGGTGTTTCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: IRANPFLCHRDGVNCLSELPVHW*LVFLGF
Trigger: AAATCCTAGAAACACCAGCCACCAGTGAACAGGAAG...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTTCCTGTTCACTGGTaGCTGGTGTTTCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKELPVHW*LVFLGF
Trigger: AAATCCTAGAAACACCAGCCACCAGTGAACAGGAAG...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAAGACTTTGCCCTTGCTaGCTAAGTTATCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKRLCPC*LSYPSR
Trigger: CCTGCTTGGATAACTTAGCCAGCAAGGGCAAAGTCT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTTGAGGTGCTGTTGTTaGCTAGGTCTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELLRCCC*LGLCFQ
Trigger: TTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGAGGGTTGACACACTTTaGTTGGTCCCAGTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVRVDTL*LVPVFE
Trigger: CTCAAAAACTGGGACCAACCAAAGTGTGTCAACCCT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTAAATGTCATGATGGCTaGTCGAGGAGAAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSKCHDG*SRRRSK
Trigger: CTTTGACCTTCTCCTCGACCAGCCATCATGACATTT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGGCAGTCCAAACTCTTaGGAGGAAGTAAATTCATGG +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKGSPNS*EEVNSW
Trigger: CCATGAATTTACTTCCTCCCAAGAGTTTGGACTGCC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR CAA 72 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTaGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARS*LPMRKEGPRKE
Trigger: CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR CAA 72 bp AATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTaGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: NVASGVYQIEVL*LARSLLPMRKE
Trigger: TTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTGTATTCACATCTCCTaGTTCCAATGCCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKCIHIS*FQCPVD
Trigger: ATCAACAGGGCATTGGAATCAGGAGATGTGAATACA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGATCCTTGCCAGGGACTaGATCTTTACAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKILARD*IFTTSS
Trigger: AGATGAAGTTGTAAAGATTCAGTCCCTGGCAAGGAT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGATCCTTGCCAGGGACTaGATCTTTACAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELILARD*IFTTSS
Trigger: AGATGAAGTTGTAAAGATTCAGTCCCTGGCAAGGAT...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATTGGAAGCAGCATGCTaGAGCATTTTTGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKLEAAC*SIFAME
Trigger: CTCCATTGCAAAAATGCTTCAGCATGCTGCTTCCAA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTTCTCTTTCTTCTCTTaGAGAGTGAGGTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKFSFFS*RVRLLS
Trigger: AGACAGCAACCTCACTCTTCAAGAGAAGAAAGAGAA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCCATTTGAACTCCCATaGATTTGGCTTTCACTTCGA +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEPFELP*IWLSLR
Trigger: TCGAAGTGAAAGCCAAATTCATGGGAGTTCAAATGG...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCCATTTGAACTCCCATaGATTTGGCTTTCACTTCGA +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKPFELP*IWLSLR
Trigger: TCGAAGTGAAAGCCAAATTCATGGGAGTTCAAATGG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCACAGGTACAAACTGAGTaGATGGATACAGTAGATACA +
Preference number: 4 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPQVQTE*MDTVDT
Trigger: TGTATCTACTGTATCCATGCACTCAGTTTGTACCTG...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTCGGATTTTTCAAAGCTaGAAATGTGTCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSRIFQS*KCVGWN
Trigger: ATTCCAGCCGACACATTTGCAGCTTTGAAAAATCCG...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CATGGTAAATGTCATGATGGCTGGTCGAGGAGAAGGTCAAAGGAGGAGAGAGAGATTAATCAGTGCTACTaGTGCCAATCTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: HGKCHDGWSRRRSKEEREINQCY*CQSSLI
Trigger: TATCAGAGAAGATTGGCAGCAGTAGCACTGATTAAT...CTCTCTCTCCTCCTTTGACCTTCTCCTCGACCAGCCATCATGACATTTACCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAAAACACCCTTCTGGATTaGAGCATTAATCAGTGCTAC +
Preference number: 4 (lower is better)
Translates to: IRANPFLCHRDGVNCLSENTLLD*SINQCY
Trigger: GTAGCACTGATTAATGCTGCAATCCAGAAGGGTGTT...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCAACACCCTTCTGGATTaGAGCATTAATCAGTGCTAC +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSNTLLD*SINQCY
Trigger: GTAGCACTGATTAATGCTGCAATCCAGAAGGGTGTT...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAATTCATTATTCTCTaGATGTGCCTGAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKEFIIL*MCLSLQ
Trigger: CTGAAGGCTCAGGCACATGCAGAGAATAATGAATTC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTGAATTCATTATTCTCTaGATGTGCCTGAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSEFIIL*MCLSLQ
Trigger: CTGAAGGCTCAGGCACATGCAGAGAATAATGAATTC...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGGTCATTTAAATTaGCAGAGCTTTCCCCTATCA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLLGHLN*QSFPLS
Trigger: TGATAGGGGAAAGCTCTGGCAATTTAAATGACCCAA...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTGCTTTTTGGAGACTTTaGCCTTGCTGGCTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSAFWRL*PCWLSY
Trigger: ATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGC...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGGCTTTTTGGAGACTTTaGCCTTGCTGGCTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEAFWRL*PCWLSY
Trigger: ATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGC...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTGTATCAGATTGAGGTaGTGTTGTTGGCTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSCIRLR*CCWLGL
Trigger: AAGACCTAGCCAACAACAGCACCTCAATCTGATACA...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGAGGAGCTGTAAACTCTaGTCATTATTGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVRSCKL*SLLPVL
Trigger: CAAGACAGGCAATAATGAGCAGAGTTTACAGCTCCT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGCAAGATTTACAAGCATaGCATTCGGATTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGQDLQA*HSDFSK
Trigger: CTTTGAAAAATCCGAATGCCATGCTTGTAAATCTTG...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTCAGCAACACCCTTCTaGATTGCAGCATTAATCAGT +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVSATPF*IAALIS
Trigger: ACTGATTAATGCTGCAATCCAGAAGGGTGTTGCTGA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGATTTTGCACAAAATTTaGAGGTTCATCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLILHKI*RFIPSS
Trigger: GGAGGATGGGATGAACCTCCAAATTTTGTGCAAAAT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTCAGGAAATTCATCCTaGATCGGAATTCCTGTCGAA +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCSGNSS*IGIPVE
Trigger: TTCGACAGGAATTCCGATCCAGGATGAATTTCCTGA...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAATAATGTCATTTATATaGTCCCGGAAGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPIMSFI*SRKYCR
Trigger: CCTGCAGTACTTCCGGGACCATATAAATGACATTAT...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTTTCATCCTTCTGGGCTaGCAGCAAACGATCAATTAC +
Preference number: 4 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFFILLG*QQTINY
Trigger: GTAATTGATCGTTTGCTGCCAGCCCAGAAGGATGAA...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGGAGTTAAAAATGTaGCATCGGGAGTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKEELKM*HRECIR
Trigger: TCTGATACACTCCCGATGCCACATTTTTAACTCCTC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCGAGGAGTTAAAAATGTaGCATCGGGAGTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSEELKM*HRECIR
Trigger: TCTGATACACTCCCGATGCCACATTTTTAACTCCTC...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGTAATGAGAACTGTGTaGTTTCAACGCCATGAGTTT +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLVMRTV*FQRHEF
Trigger: AAACTCATGGCGTTGAAACCACACAGTTCTCATTAC...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
3UTR CAA 72 bp AACTCTGCTCATTATTGCCTGTCTTGGATGTGGCCTTaGGGATTCATAGCCTCTTTTAAGGAAACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NSAHYCLSWMWP*GFIASFKETGL
Trigger: CAACCCTGTTTCCTTAAAAGAGGCTATGAATCCCAAAGGCCACATCCAAGACAGGCAATAATGAGCAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGACATTAAATTTATCCTaGAGCTCTGGGACATCACAA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLTLNLS*SSGTSQ
Trigger: TTGTGATGTCCCAGAGCTTCAGGATAAATTTAATGT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGATAAAAGTCTCCATTTaGACTCCCATGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLIKVSI*TPMNLA
Trigger: AGCCAAATTCATGGGAGTTCAAATGGAGACTTTTAT...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGATTTATCTGAGTAGCTaGATTTTAGCAATGGGACTC +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLIYLSS*ILAMGL
Trigger: GAGTCCCATTGCTAAAATTCAGCTACTCAGATAAAT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGAGTGAATTGTCTCTCTaGATCAAGTCAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKESELSL*IKSISV
Trigger: CACAGAGATTGACTTGATTCAGAGAGACAATTCACT...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCAGGTACAAACTGAGTaGATGGATACAGTAGATACA +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCQVQTE*MDTVDT
Trigger: TGTATCTACTGTATCCATGCACTCAGTTTGTACCTG...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGTCCTCCCGAGAAAGCTaGATAGAATTTTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKESSRES*IEFCTK
Trigger: TTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGA...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTCCTCCCGAGAAAGCTaGATAGAATTTTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELSSRES*IEFCTK
Trigger: TTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAATGCTGAAGCATTTTTaGAATGGAGCCCAGATTTCG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKMLKHF*NGAQIS
Trigger: CGAAATCTGGGCTCCATTGCAAAAATGCTTCAGCAT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTCAAGTCAATCTCTGTaGACCAACAAAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNSSQSL*TNKNRQ
Trigger: CTGCCTGTTTTTGTTGGTGCACAGAGATTGACTTGA...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGATTTTGCACAAAATTTaGAGGTTCATCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKILHKI*RFIPSS
Trigger: GGAGGATGGGATGAACCTCCAAATTTTGTGCAAAAT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGATAATGTCATTTATATaGTCCCGGAAGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEIMSFI*SRKYCR
Trigger: CCTGCAGTACTTCCGGGACCATATAAATGACATTAT...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGAGGAGCAACAATGGCTaGATTCATGTATCGATAATA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLRSNNG*IHVSII
Trigger: TATTATCGATACATGAATCCAGCCATTGTTGCTCCT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGACATCACAAGCAGTTTaGAAAAACCGTCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: GKKDLERSCEVLLSFILLTSQAV*KNRLNF
Trigger: GAAATTCAGACGGTTTTTCCAAACTGCTTGTGATGT...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
3UTR CAA 72 bp AAATTTATCCTGAAGCTCTGGGACATCACAAGCAGTTaGGAAAAACCGTCTGAATTTCTGGTAGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: KFILKLWDITSS*EKPSEFLVGLG
Trigger: TCCCAGTCCTACCAGAAATTCAGACGGTTTTTCCAAACTGCTTGTGATGTCCCAGAGCTTCAGGATAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CAA 72 bp TTTACAGATTTTGACTTTTTCATCTTGTCAGGTGTTTaGGCATCACGGATAGCACGTCTCTGCATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: FTDFDFFILSGV*ASRIARLCMAL
Trigger: GAGAGCCATGCAGAGACGTGCTATCCGTGATGCCAAAACACCTGACAAGATGAAAAAGTCAAAATCTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp CTTGCAGGTCCTCAATTTCCAGAAGAACTCCTTTTTCATGTAGTCTTGCTGCTGATGGCATTCAACCACTaGATCACATTATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LAGPQFPEELLFHVVLLLMAFNH*ITLSVC
Trigger: ACACACTGATAATGTGATTCAGTGGTTGAATGCCAT...CAGCAGCAAGACTACATGAAAAAGGAGTTCTTCTGGAAATTGAGGACCTGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATTGTTTATATTGCCTTaGATTTCAGCTTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKLFILP*ISACVS
Trigger: GCTCACGCAAGCTGAAATTCAAGGCAATATAAACAA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTTCAGCACTTTGGCAATaGAGCGCATCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: AHFTLFCISNCVEGTINLSALWQ*SASHKG
Trigger: TCCCTTATGGGATGCGCTTCATTGCCAAAGTGCTGA...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR TCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGACATTAAATTTATCCTaGAGCTCTGGGACATCACAA +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELTLNLS*SSGTSQ
Trigger: TTGTGATGTCCCAGAGCTTCAGGATAAATTTAATGT...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGATAAAAGTCTCCATTTaGACTCCCATGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKIKVSI*TPMNLA
Trigger: AGCCAAATTCATGGGAGTTCAAATGGAGACTTTTAT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTATAAAAGTCTCCATTTaGACTCCCATGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCIKVSI*TPMNLA
Trigger: AGCCAAATTCATGGGAGTTCAAATGGAGACTTTTAT...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGATCCTTCAGTTTTCCTaGTGGGACAGAAATATAAAG +
Preference number: 4 (lower is better)
Translates to: IRARGVKNVASGVYQIEVILQFS*WDRNIK
Trigger: CTTTATATTTCTGTCCCATCAGGAAAACTGAAGGAT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR TCA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCATCCTTCAGTTTTCCTaGTGGGACAGAAATATAAAG +
Preference number: 4 (lower is better)
Translates to: PFISLGFLETLPLLAKLSILQFS*WDRNIK
Trigger: CTTTATATTTCTGTCCCATCAGGAAAACTGAAGGAT...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR TCA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTATTTATCTGAGTAGCTaGATTTTAGCAATGGGACTC +
Preference number: 4 (lower is better)
Translates to: KNVASGVYQIEVLLLARSIYLSS*ILAMGL
Trigger: GAGTCCCATTGCTAAAATTCAGCTACTCAGATAAAT...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR GCA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTTCATCCATCTCCTCTaGAGTAAGTCTTTCATTATC +
Preference number: 4 (lower is better)
Translates to: REELKMWHRECIRLRCCCFIHLL*SKSFII
Trigger: GATAATGAAAGACTTACTGCAGAGGAGATGGATGAA...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGAGCTGCATAGAATTTTaGACAAAATTTGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RARGVKNVASGVYQIEVLSCIEF*TKFGGS
Trigger: TGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTTGGGTCATTTAAATTaGCAGAGCTTTCCCCTATCA +
Preference number: 4 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNLGHLN*QSFPLS
Trigger: TGATAGGGGAAAGCTCTGGCAATTTAAATGACCCAA...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTAGAAGTTCCCCAGTTTaGCAAGGTAGACCCCATTCC +
Preference number: 4 (lower is better)
Translates to: AHFTLFCISNCVEGTINLRSSPV*QGRPHS
Trigger: GGAATGGGGTCTACCTTGCCAAACTGGGGAACTTCT...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGCAAGATTTACAAGCATaGCATTCGGATTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVQDLQA*HSDFSK
Trigger: CTTTGAAAAATCCGAATGCCATGCTTGTAAATCTTG...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTACCACCAGGTTCACATaGTCCACGCAAGCTTGGATA +
Preference number: 4 (lower is better)
Translates to: AHFTLFCISNCVEGTINLTTRFT*STQAWI
Trigger: TATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGT...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGAGGAGCAACAATGGCTaGATTCATGTATCGATAATA +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKRSNNG*IHVSII
Trigger: TATTATCGATACATGAATCCAGCCATTGTTGCTCCT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTTGTATTCAGTAAGATaGTTCGAGCATCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: LLARSLLPMRKEGPRKELLYSVR*FEHPFL
Trigger: CAGAAATGGATGCTCGAACCATCTTACTGAATACAA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR TCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTTTCTCTGCATGTGCCTaGGCCTTCAGTTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: AHFTLFCISNCVEGTINLFSACA*AFSFIN
Trigger: GTTGATGAAACTGAAGGCTCAGGCACATGCAGAGAA...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATAGTGCTTCACCCACTTaGTGTTATTATCTCCTACTG +
Preference number: 4 (lower is better)
Translates to: VCWGILCATKATILYHHHSASPT*CYYLLL
Trigger: CAGTAGGAGATAATAACAGCAAGTGGGTGAAGCACT...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGAGCTGCATAGAATTTTaGACAAAATTTGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKSCIEF*TKFGGS
Trigger: TGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATAGCTTGGTGCATCCTTaGCAGGGACTGAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNSLVHP*QGLNLY
Trigger: GTAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCT...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR GCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTGATTTCCTCTTGGAGTaGTGTCTTAAAGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: AHFTLFCISNCVEGTINLDFLLE*CLKEPQ
Trigger: CTGCGGCTCTTTAAGACAGCACTCCAAGAGGAAATC...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGCCCGAATAAAAGCCTaGATTTTGATAATGTCATTT +
Preference number: 4 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKARIKA*ILIMSF
Trigger: AAATGACATTATCAAAATCCAGGCTTTTATTCGGGC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATACATCACAAGCAGTTTaGAAAAACCGTCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNTSQAV*KNRLNF
Trigger: GAAATTCAGACGGTTTTTCCAAACTGCTTGTGATGT...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAACATCACAAGCAGTTTaGAAAAACCGTCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKTSQAV*KNRLNF
Trigger: GAAATTCAGACGGTTTTTCCAAACTGCTTGTGATGT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CCA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATTGTATTCAGTAAGATaGTTCGAGCATCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKLYSVR*FEHPFL
Trigger: CAGAAATGGATGCTCGAACCATCTTACTGAATACAA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR GCA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATAGCTGCATAGAATTTTaGACAAAATTTGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNSCIEF*TKFGGS
Trigger: TGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCT...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATATCCCGAGCTTTGTTTaGCCGAATAAAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNIPSFV*PNKSLD
Trigger: ATCCAGGCTTTTATTCGGGCAAACAAAGCTCGGGAT...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATCAGTCGCCTTGTATCTaGTCTGTTCTCGATCATAGA +
Preference number: 4 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNQSPCI*SVLDHR
Trigger: TCTATGATCGAGAACAGACCAGATACAAGGCGACTG...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CCA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATATTTTGCACAAAATTTaGAGGTTCATCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: VCWGILCATKATILYHHHILHKI*RFIPSS
Trigger: GGAGGATGGGATGAACCTCCAAATTTTGTGCAAAAT...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CCA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTTTGAGGTGCTGTTGTTaGCTAGGTCTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AHFTLFCISNCVEGTINLLRCCC*LGLCFQ
Trigger: TTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAA...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR GCA 90 bp CCTATACTTATTCCCTCAACCACCAGCTTCCCAGTTACATCTATAACATACTCATTCATCCATCTCCTCTaGAGTAAGTCTTTCATTATC +
Preference number: 4 (lower is better)
Translates to: PILIPSTTSFPVTSITYSFIHLL*SKSFII
Trigger: GATAATGAAAGACTTACTGCAGAGGAGATGGATGAA...TGAGTATGTTATAGATGTAACTGGGAAGCTGGTGGTTGAGGGAATAAGTATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS-3UTR GCA 90 bp TATACTTATTCCCTCAACCACCAGCTTCCCAGTTACATCTATAACATACTCAAAGCTGACTCTGAATATTaGCAAACAGATGGACCTACA +
Preference number: 4 (lower is better)
Translates to: YTYSLNHQLPSYIYNILKADSEY*QTDGPT
Trigger: TGTAGGTCCATCTGTTTGGCAATATTCAGAGTCAGC...TTTGAGTATGTTATAGATGTAACTGGGAAGCTGGTGGTTGAGGGAATAAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS-3UTR TCA 90 bp CACTGTGTTCAGCCTCAAAGCAATCTTTATTTGTATTCACACTATTATCAGTTCTCATTATCCCTCACTTaGCTTTTCCACCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HCVQPQSNLYLYSHYYQFSLSLT*LFHQSS
Trigger: TGAGCTTTGGTGGAAAAGTCAAGTGAGGGATAATGA...GAACTGATAATAGTGTGAATACAAATAAAGATTGCTTTGAGGCTGAACACAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS-3UTR GCA 90 bp AGGCTACTTATTGCCATAAATAAATACCCTACCTATACTTATTCCCTCAACCACGTAACGCCCAAAACATaGACAATAAGCATAAGACTG +
Preference number: 4 (lower is better)
Translates to: RLLIAINKYPTYTYSLNHVTPKT*TISIRL
Trigger: CAGTCTTATGCTTATTGTGCATGTTTTGGGCGTTAC...GTGGTTGAGGGAATAAGTATAGGTAGGGTATTTATTTATGGCAATAAGTAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS-3UTR TCA 90 bp AGGCTACTTATTGCCATAAATAAATACCCTACCTATACTTATTCCCTCAACCACAAATGCCCATCACAGTaGTTCATGATAAACTCTCAT +
Preference number: 4 (lower is better)
Translates to: RLLIAINKYPTYTYSLNHKCPSQ*FMINSH
Trigger: ATGAGAGTTTATCATGAATCACTGTGATGGGCATTT...GTGGTTGAGGGAATAAGTATAGGTAGGGTATTTATTTATGGCAATAAGTAGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS-3UTR CCA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATGCCCGAATAAAAGCCTaGATTTTGATAATGTCATTT +
Preference number: 4 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNARIKA*ILIMSF
Trigger: AAATGACATTATCAAAATCCAGGCTTTTATTCGGGC...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633485.1
3UTR CAA 72 bp ATGGACCACTGTGTTCAGCCTCAAAGCAATCTTTATTaGTATTCACACTATTATCAGTTCCCTTCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: MDHCVQPQSNLY*YSHYYQFPSLN
Trigger: ATTAAGAGAAGGGAACTGATAATAGTGTGAATACAAATAAAGATTGCTTTGAGGCTGAACACAGTGGTCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS GCA 90 bp AGAGCCATAGTGCGGCCGGGCCACGCCCAGCCCGTCAACCTCGTCTaGGGCGGACATGGCGGACGAGCCCGAGTCTCTGCTGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RAIVRPGHAQPVNLV*GGHGGRARVSAEEA
Trigger: GGCTTCCTCAGCAGAGACTCGGGCTCGTCCGCCATGTCCGCCGCAGACGAGGTTGACGGGCTGGGCGTGGCCCGGCCGCACTATGGCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS GCA 90 bp ACAGCCATAGTGCGGCCGGGCCACGCCCAGCCCGTCAACCTCGTCTaGGGCGGACATGGCGGACGAGCCCGAGTCTCTGCTGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: TAIVRPGHAQPVNLV*GGHGGRARVSAEEA
Trigger: GGCTTCCTCAGCAGAGACTCGGGCTCGTCCGCCATGTCCGCCGCAGACGAGGTTGACGGGCTGGGCGTGGCCCGGCCGCACTATGGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560418.1
CDS TCA 90 bp GCGGCGGACATGGCGGACGAGCCCGAGTCTCTGCTGAGGAAGCCGTaGAACCTTGGAGGCGCGGACGGCGGTAGCTACAGCTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: AADMADEPESLLRKP*NLGGADGGSYSSCQ
Trigger: TTGGCAGGAGCTGTAGCTACCGCCGTCCGCGCCTCCAAGGTTTCACGGCTTCCTCAGCAGAGACTCGGGCTCGTCCGCCATGTCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 90 bp CAACCTCGTCTGCGGCGGACATGGCGGACGAGCCCGAGTCTCTGCTaGGGAAGCCGTGAAACCTTGGAGGCGCGGACGGCGGTAGCTACA +
Preference number: 5 (lower is better)
Translates to: QPRLRRTWRTSPSLC*GSRETLEARTAVAT
Trigger: TGTAGCTACCGCCGTCCGCGCCTCCAAGGTTTCACGGCTTCCTCAGCAGAGACTCGGGCTCGTCCGCCATGTCCGCCGCAGACGAGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCTGGAGGCCAGTCGCCTaGTATCTGGTCTGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSWRPVA*YLVCSR
Trigger: TCGAGAACAGACCAGATACAAGGCGACTGGCCTCCA...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp CACCACGCTTCTAAGCCTCCCAAACCAAGCAGCCACTCCGCAGGTCATAGGAGGCGGCCTCCCAACGTGTaGGGATTACAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: HHASKPPKPSSHSAGHRRRPPNV*GLQAWT
Trigger: GGTCCATGCCTGTAATCCCAACACGTTGGGAGGCCG...CCTCCTATGACCTGCGGAGTGGCTGCTTGGTTTGGGAGGCTTAGAAGCGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAGGAAGCCGTGAAACCTaGGAGGCGCGGACGGCGGTA +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRGSRET*EARTAV
Trigger: TACCGCCGTCCGCGCCTCCAAGGTTTCACGGCTTCC...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCATGGCTGAGAGAAACTaGTCTGTCACAGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVMAERN*SVTARM
Trigger: CATGCGGGCTGTGACAGACAAGTTTCTCTCAGCCAT...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS GCA 90 bp TCGCTATTCTGTTGCTGCAGTCCTCGAAGCCCCAGGGCTGGTGACTaGAGAGCCCTGAACAAGGCCAGTGCATCTCCTTGTTCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: SLFCCCSPRSPRAGD*RALNKASASPCSKA
Trigger: GGCTTTAGAACAAGGAGATGCACTGGCCTTGTTCAGGGCTCTGCAGTCACCAGCCCTGGGGCTTCGAGGACTGCAGCAACAGAATAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAGCCCAGATTTCGGCGTaGGTCTGTGGTAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSAQISA*VCGKLA
Trigger: GGCCAGCTTACCACAGACCAACGCCGAAATCTGGGC...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCCCAGTGCCTCCTTATTaGGGTCATTTAAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSPVPPY*GHLNCQ
Trigger: CTGGCAATTTAAATGACCCAAATAAGGAGGCACTGG...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS TCA 90 bp CCGGGTCCCCTCTGTCCCCCGAATGCAGTACCCTGGCAATGTCGTTaGTCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PGPLCPPNAVPWQCR*SVPGICSLGPRFQA
Trigger: AGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTCGGGGGACAGAGGGGACCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS GCA 90 bp TTATCACTCAGGAGCTGCTTCAAGTACCAGTCGCTATTCTGTTGCTaGAGTCCTCGAAGCCCCAGGGCTGGTGACTGCAGAGCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LSLRSCFKYQSLFCC*SPRSPRAGDCRALN
Trigger: GTTCAGGGCTCTGCAGTCACCAGCCCTGGGGCTTCGAGGACTGCAGCAACAGAATAGCGACTGGTACTTGAAGCAGCTCCTGAGTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 90 bp TGTTTATCACTCAGGAGCTGCTTCAAGTACCAGTCGCTATTCTGTTaGTGCAGTCCTCGAAGCCCCAGGGCTGGTGACTGCAGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: CLSLRSCFKYQSLFC*CSPRSPRAGDCRAL
Trigger: CAGGGCTCTGCAGTCACCAGCCCTGGGGCTTCGAGGACTGCAGCAACAGAATAGCGACTGGTACTTGAAGCAGCTCCTGAGTGATAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 90 bp GGTGATCAGGCCTTCATTGGCCAGCCACAGCTGTTCTCGGTTATATaGGGCAGTCACCCCAGAGATAGAACTCTGGATCTCCTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: GDQAFIGQPQLFSVI*GSHPRDRTLDLLPR
Trigger: TCTCGGGAGGAGATCCAGAGTTCTATCTCTGGGGTGACTGCCGCATATAACCGAGAACAGCTGTGGCTGGCCAATGAAGGCCTGATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS GCA 90 bp CTTCTGCAGCTGAAGCAGCACAGATTGCCAAGCCCAAGTACCATCTaGTCTGGGACTTGGAGAGAGGAATGGCAACCTCTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLQLKQHRLPSPSTI*SGTWREEWQPLSAC
Trigger: GCAGGCAGAGAGAGGTTGCCATTCCTCTCTCCAAGTCCCAGAGCAGATGGTACTTGGGCTTGGCAATCTGTGCTGCTTCAGCTGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGGAAGCCGTGAAACCTaGGAGGCGCGGACGGCGGTA +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLGSRET*EARTAV
Trigger: TACCGCCGTCCGCGCCTCCAAGGTTTCACGGCTTCC...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCAGGGCACTCAGTGTTTaGCCAACATCACCACTTTCT +
Preference number: 5 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVRALSV*PTSPLS
Trigger: AGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCCT...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCCCACGGGCACCACGGTaGAAACTTACAACCATTTTA +
Preference number: 5 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVPRAPR*KLTTIL
Trigger: TAAAATGGTTGTAAGTTTCAACCGTGGTGCCCGTGG...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAGCCCAGATTTCGGCGTaGGTCTGTGGTAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRAQISA*VCGKLA
Trigger: GGCCAGCTTACCACAGACCAACGCCGAAATCTGGGC...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGGCTTTTTGGAGACTTaGCCCTTGCTGGCTAAGTTA +
Preference number: 5 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVGFLET*PLLAKL
Trigger: TAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCC...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS GCA 90 bp AGCCTCTCAGCTTTGAACAAGGCCGGGTCCCCTCTGTCCCCCGAATaGAGTACCCTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTC +
Preference number: 5 (lower is better)
Translates to: SLSALNKAGSPLSPE*STLAMSLISSWYLF
Trigger: GAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTCGGGGGACAGAGGGGACCCGGCCTTGTTCAAAGCTGAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGGAAGCCGTGAAACCTaGGAGGCGCGGACGGCGGTA +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELGSRET*EARTAV
Trigger: TACCGCCGTCCGCGCCTCCAAGGTTTCACGGCTTCC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAGCTGGGCAGCACTGTTaGCAGCATCCACTCCAGACT +
Preference number: 5 (lower is better)
Translates to: LERSCEVLLSFILLGWQQAGQHC*QHPLQT
Trigger: AGTCTGGAGTGGATGCTGCAAACAGTGCTGCCCAGC...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCTTGATATCCATGAGATaGAGGTCATTCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVLISMR*RSFSSC
Trigger: GCAGCTGGAGAATGACCTCAATCTCATGGATATCAA...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp CCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCGTCCACTAGCAGTCCAATTTaGATATCCATGAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: PELSPIRDSMVGTSPRSSTSSPI*ISMRLR
Trigger: CCTCAATCTCATGGATATCAAAATTGGACTGCTAGT...GGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTGCCAGAGCTTTCCCCTATCAGGGACTCGATGGTGGGCACCTCGCCGAGGTCCTTCTCTTTCTTCTCTaGAAGAGTGAGGTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: IARAFPYQGLDGGHLAEVLLFLL*KSEVAV
Trigger: GACAGCAACCTCACTCTTCAAGAGAAGAAAGAGAAG...GACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGGGAAAGCTCTGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS GCA 90 bp AAGAGGTCTGTGGAGAATACCCTGAACTTGGTGGCTCCCAGCCACTaGCTCAACTCTTCATGCGGAGCCAGTTACTCACTGAGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: KRSVENTLNLVAPSH*LNSSCGASYSLRVL
Trigger: CAAGACTCTCAGTGAGTAACTGGCTCCGCATGAAGAGTTGAGGCAGTGGCTGGGAGCCACCAAGTTCAGGGTATTCTCCACAGACCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS CCA 90 bp TCTTCCAGGCAAAAGTTAGAACTCTACCTATCAGGGACTCGATGGTaGGCACCTCGCCGAGGTCGTCCAGCAGTTCGTGGATTGGATCAT +
Preference number: 5 (lower is better)
Translates to: SSRQKLELYLSGTRW*APRRGRPAVRGLDH
Trigger: ATGATCCAATCCACGAACTGCTGGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGTAGAGTTCTAACTTTTGCCTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558491.1
CDS CCA 90 bp AAGCAGCACAGATTGCCAAGCCCAAGTACCATCTGCTCTGGGACTTaGAGAGAGGAATGGCAACCTCTCTCTGCCTGCAGCACTTACATC +
Preference number: 5 (lower is better)
Translates to: KQHRLPSPSTICSGT*REEWQPLSACSTYI
Trigger: GATGTAAGTGCTGCAGGCAGAGAGAGGTTGCCATTCCTCTCTCCAAGTCCCAGAGCAGATGGTACTTGGGCTTGGCAATCTGTGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTGGAGGCCAGTCGCCTaGTATCTGGTCTGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWWRPVA*YLVCSR
Trigger: TCGAGAACAGACCAGATACAAGGCGACTGGCCTCCA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAGGGGCCAGGCCTAGCTaGAACAGGTACAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRGARPS*NRYKLS
Trigger: ACTCAGTTTGTACCTGTTCAAGCTAGGCCTGGCCCC...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGACAGAGTCCATGAACTaGGTGGACTTGTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: KNKVWVVANPSMALHASLTESMN*VDLFWG
Trigger: GCCCCAGAACAAGTCCACCAAGTTCATGGACTCTGT...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAACAGAGTCCATGAACTaGGTGGACTTGTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSTESMN*VDLFWG
Trigger: GCCCCAGAACAAGTCCACCAAGTTCATGGACTCTGT...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCACATAGGGCAGTTTGCTaGCCTCTCCTGTCTGAGACT +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSHRAVC*PLLSET
Trigger: AGTCTCAGACAGGAGAGGCAAGCAAACTGCCCTATG...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGCCCAGATTTCGGCGTaGGTCTGTGGTAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLAQISA*VCGKLA
Trigger: GGCCAGCTTACCACAGACCAACGCCGAAATCTGGGC...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCCAGCAGTTCGTGGATaGGATCATTGTGCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWPAVRG*DHCAPE
Trigger: CTCCGGAGCACAATGATCCAATCCACGAACTGCTGG...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 90 bp TGGCTTCAGCAAGATCACTGTGGTAAGTTTCACCACACTCAGGGATaGCTCCATACAAGCCAACATCAGGGGAGCGAAGGGCACTCAGTG +
Preference number: 5 (lower is better)
Translates to: WLQQDHCGKFHHTQG*LHTSQHQGSEGHSV
Trigger: CACTGAGTGCCCTTCGCTCCCCTGATGTTGGCTTGTATGGAGTCATCCCTGAGTGTGGTGAAACTTACCACAGTGATCTTGCTGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 90 bp AAGCCTTGCCTTCAGGATAACAAAAGAGGTCTGTGGAGAATACCCTaGACTTGGTGGCTCCCAGCCACTGCCTCAACTCTTCATGCGGAG +
Preference number: 5 (lower is better)
Translates to: KPCLQDNKRGLWRIP*TWWLPATASTLHAE
Trigger: CTCCGCATGAAGAGTTGAGGCAGTGGCTGGGAGCCACCAAGTTCAGGGTATTCTCCACAGACCTCTTTTGTTATCCTGAAGGCAAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS-3UTR CAA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGCCAGTCGCTATTCTGTaGCTGCAGTCCTCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVPVAIL*LQSSKP
Trigger: GGGCTTCGAGGACTGCAGCAACAGAATAGCGACTGG...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCCAGTCGCTATTCTGTaGCTGCAGTCCTCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLPVAIL*LQSSKP
Trigger: GGGCTTCGAGGACTGCAGCAACAGAATAGCGACTGG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCATCTAATCAGCGTGTCTaGGTAATGCTGGGCCACTTC +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSSNQRV*VMLGHF
Trigger: GAAGTGGCCCAGCATTACCAAGACACGCTGATTAGA...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCATAGCGCTTTCGAGCTaGGTGCATCCTTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFIALSS*VHPCQG
Trigger: TCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTAT...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGATGGCTGAGAGAAACTaGTCTGTCACAGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWMAERN*SVTARM
Trigger: CATGCGGGCTGTGACAGACAAGTTTCTCTCAGCCAT...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCGTGGATTGGATCATaGTGCTCCGGAGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRSWIGS*CSGAMA
Trigger: TGCCATTGCTCCGGAGCACAATGATCCAATCCACGA...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCCAGCAGTTCGTGGATaGGATCATTGTGCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFPAVRG*DHCAPE
Trigger: CTCCGGAGCACAATGATCCAATCCACGAACTGCTGG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGCCAGGCACGTCGAACTaGTTGGTCAGGGTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: GKKDLERSCEVLLSFILLPGTSN*LVRVRD
Trigger: GTCTCTCACCCTGACCAACAAGTTCGACGTGCCTGG...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CACCACGCTTCTAAGCCTCCCAAACCAAGCAGCCACTCCGCAGGTCATAGGAGGTTCATTATCCCTCACTaGACTTTTCCACCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: HHASKPPKPSSHSAGHRRFIIPH*TFPPKL
Trigger: GAGCTTTGGTGGAAAAGTCAAGTGAGGGATAATGAA...CCTCCTATGACCTGCGGAGTGGCTGCTTGGTTTGGGAGGCTTAGAAGCGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS TCA 90 bp GAAGCGCATCCCATAAGGGATTTTGTCCACAGAGCTGACAATGGCTaGGAGAAACTTGTCTGTCACAGCCCGCATGTTCCTGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: EAHPIRDFVHRADNG*EKLVCHSPHVPDGA
Trigger: AGCTCCATCAGGAACATGCGGGCTGTGACAGACAAGTTTCTCTCAGCCATTGTCAGCTCTGTGGACAAAATCCCTTATGGGATGCGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CCA 90 bp CTGTCCCCCGAATGCAGTACCCTGGCAATGTCGTTGATCAGTTCCTaGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSPECSTLAMSLISS*YLFFGSTVPSSVSF
Trigger: GAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTCGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGGCTGGGCAGCACTGTTaGCAGCATCCACTCCAGACT +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVAGQHC*QHPLQT
Trigger: AGTCTGGAGTGGATGCTGCAAACAGTGCTGCCCAGC...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGGATTCCAATGCCCTGTaGATCAGGGCCACCGATGAC +
Preference number: 5 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVDSNAL*IRATDD
Trigger: GTCATCGGTGGCCCTGATCAACAGGGCATTGGAATC...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAAGGGCACTCAGTGTTTaGCCAACATCACCACTTTCT +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSRALSV*PTSPLS
Trigger: AGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCCT...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAGAGCTTGGTGCATCCTaGCCAGGGACTGAATCTTTA +
Preference number: 5 (lower is better)
Translates to: LERSCEVLLSFILLGWQQELGAS*PGTESL
Trigger: TAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCTC...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGGGCACGTCGAACTTGTaGGTCAGGGTGAGAGACACT +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLGTSNL*VRVRDT
Trigger: AGTGTCTCTCACCCTGACCAACAAGTTCGACGTGCC...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTCCAGGCACGTCGAACTaGTTGGTCAGGGTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: KNVASGVYQIEVLLLARSPGTSN*LVRVRD
Trigger: GTCTCTCACCCTGACCAACAAGTTCGACGTGCCTGG...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCCAGGCACGTCGAACTaGTTGGTCAGGGTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVPGTSN*LVRVRD
Trigger: GTCTCTCACCCTGACCAACAAGTTCGACGTGCCTGG...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCAGGCTTTTTGGAGACTTaGCCCTTGCTGGCTAAGTTA +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSGFLET*PLLAKL
Trigger: TAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCC...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTTCAACGCCATGAGTTaGTTGGGGCATCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFFNAMS*LGHPLC
Trigger: GCACAGAGGATGCCCCAACAAACTCATGGCGTTGAA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS TCA 90 bp ATTGCTTCCACACTGTATTCACATCTCCTGATTCCAATGCCCTGTTaGTCAGGGCCACCGATGACAACATCTCCACTGCGACAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: IASTLYSHLLIPMPC*SGPPMTTSPLRQRA
Trigger: AGCTCTCTGTCGCAGTGGAGATGTTGTCATCGGTGGCCCTGATCAACAGGGCATTGGAATCAGGAGATGTGAATACAGTGTGGAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAATCTTCTCTGATATaGCTGGGCAGCACTGTTTGC +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWQSSLI*LGSTVC
Trigger: GCAAACAGTGCTGCCCAGCAATATCAGAGAAGATTG...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCCTCTCATGTTCCTCTaGCACCACCAGGTTCACATG +
Preference number: 5 (lower is better)
Translates to: RARGVKNVASGVYQIEVLPLMFL*HHQVHM
Trigger: CATGTGAACCTGGTGGTGCAAGAGGAACATGAGAGG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAAGTGATCAGGCCTTCATaGGCCAGCCACAGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: IRANPFLCHRDGVNCLSEVIRPS*ASHSCS
Trigger: AGAACAGCTGTGGCTGGCCAATGAAGGCCTGATCAC...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGTGATCAGGCCTTCATaGGCCAGCCACAGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELVIRPS*ASHSCS
Trigger: AGAACAGCTGTGGCTGGCCAATGAAGGCCTGATCAC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATATGCCTTCTTCTGCTaGTATCCTCTCCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRYAFFC*YPLHCD
Trigger: GTCACAGTGGAGAGGATACAAGCAGAAGAAGGCATA...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGTATGCCTTCTTCTGCTaGTATCCTCTCCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGYAFFC*YPLHCD
Trigger: GTCACAGTGGAGAGGATACAAGCAGAAGAAGGCATA...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCGAGCTTGGTGCATCCTaGCCAGGGACTGAATCTTTA +
Preference number: 5 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFELGAS*PGTESL
Trigger: TAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCTC...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGATAGCGCTTTCGAGCTaGGTGCATCCTTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVIALSS*VHPCQG
Trigger: TCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTAT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATTCTCTCTCTTCTCCTaGCTCAAAGCCTTGAGACCT +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRFSLFS*LKALRP
Trigger: AGGTCTCAAGGCTTTGAGCAAGGAGAAGAGAGAGAA...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGACAGAGTCCATGAACTaGGTGGACTTGTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: RARGVKNVASGVYQIEVLTESMN*VDLFWG
Trigger: GCCCCAGAACAAGTCCACCAAGTTCATGGACTCTGT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCCACGGGCACCACGGTaGAAACTTACAACCATTTTA +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWPRAPR*KLTTIL
Trigger: TAAAATGGTTGTAAGTTTCAACCGTGGTGCCCGTGG...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGAGTCCTTCAGCACTTaGGCAATGAAGCGCATCCCA +
Preference number: 5 (lower is better)
Translates to: GKKDLERSCEVLLSFILLESFST*AMKRIP
Trigger: TGGGATGCGCTTCATTGCCAAAGTGCTGAAGGACTC...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCATCGTGGATTGGATCATaGTGCTCCGGAGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPSWIGS*CSGAMA
Trigger: TGCCATTGCTCCGGAGCACAATGATCCAATCCACGA...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCCAGCAGTTCGTGGATaGGATCATTGTGCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKPAVRG*DHCAPE
Trigger: CTCCGGAGCACAATGATCCAATCCACGAACTGCTGG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGGCACGTCGAACTTGTaGGTCAGGGTGAGAGACACT +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELGTSNL*VRVRDT
Trigger: AGTGTCTCTCACCCTGACCAACAAGTTCGACGTGCC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAAAACTCTGCTCATTATaGCCTGTCTTGGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRKLCSL*PVLDVA
Trigger: GGCCACATCCAAGACAGGCAATAATGAGCAGAGTTT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGATTATGTTCAGGACTTaGTCGCTGCAGGGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVIMFRT*SLQGSQ
Trigger: CTGGCTACCCTGCAGCGACAAAGTCCTGAACATAAT...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp CTTGCAGGTCCTCAATTTCCAGAAGAACTCCTTTTTCATGTAGTCTTGCTGCTGGATTCCAATGCCCTGTaGATCAGGGCCACCGATGAC +
Preference number: 5 (lower is better)
Translates to: LAGPQFPEELLFHVVLLLDSNAL*IRATDD
Trigger: GTCATCGGTGGCCCTGATCAACAGGGCATTGGAATC...CAGCAGCAAGACTACATGAAAAAGGAGTTCTTCTGGAAATTGAGGACCTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCCTCTCATGTTCCTCTaGCACCACCAGGTTCACATG +
Preference number: 5 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEPLMFL*HHQVHM
Trigger: CATGTGAACCTGGTGGTGCAAGAGGAACATGAGAGG...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTGCTTCTTGGGTGTCTTaGTTGGACTGCCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCASWVS*LDCQIP
Trigger: TGGAATCTGGCAGTCCAACAAAGACACCCAAGAAGC...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGTGATCAGGCCTTCATaGGCCAGCCACAGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKVIRPS*ASHSCS
Trigger: AGAACAGCTGTGGCTGGCCAATGAAGGCCTGATCAC...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAATAGCGCTTTCGAGCTaGGTGCATCCTTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKIALSS*VHPCQG
Trigger: TCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTAT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATTGATATCCATGAGATaGAGGTCATTCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LERSCEVLLSFILLGWQQLISMR*RSFSSC
Trigger: GCAGCTGGAGAATGACCTCAATCTCATGGATATCAA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGCATAGGGCAGTTTGCTaGCCTCTCCTGTCTGAGACT +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELHRAVC*PLLSET
Trigger: AGTCTCAGACAGGAGAGGCAAGCAAACTGCCCTATG...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGTCCTTCAGCACTTaGGCAATGAAGCGCATCCCA +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKESFST*AMKRIP
Trigger: TGGGATGCGCTTCATTGCCAAAGTGCTGAAGGACTC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTGAGTCCTTCAGCACTTaGGCAATGAAGCGCATCCCA +
Preference number: 5 (lower is better)
Translates to: KNVASGVYQIEVLLLARSESFST*AMKRIP
Trigger: TGGGATGCGCTTCATTGCCAAAGTGCTGAAGGACTC...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAATCGTGGATTGGATCATaGTGCTCCGGAGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: IRANPFLCHRDGVNCLSESWIGS*CSGAMA
Trigger: TGCCATTGCTCCGGAGCACAATGATCCAATCCACGA...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGACTTCTCTTTCTTCTCTaGAAGAGTGAGGTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRLLFLL*KSEVAV
Trigger: GACAGCAACCTCACTCTTCAAGAGAAGAAAGAGAAG...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGCCTGGTATTTGTTCTTaGGGTCCACGGTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVPGICS*GPRFQA
Trigger: AGCTTGGAACCGTGGACCCAAAGAACAAATACCAGG...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCTTGGAGACTTTGCCCTaGCTGGCTAAGTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFLETLP*LAKLSK
Trigger: CTTGGATAACTTAGCCAGCAAGGGCAAAGTCTCCAA...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCATTGTTGGCTAGGTCTTaGCTTCCAATGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSLLARS*LPMRKE
Trigger: TTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGCGGGAGTGTATCAGATaGAGGTGCTGTTGTTGGCTA +
Preference number: 5 (lower is better)
Translates to: GKKDLERSCEVLLSFILLRECIR*RCCCWL
Trigger: TAGCCAACAACAGCACCTCAATCTGATACACTCCCG...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTCGGGAGTGTATCAGATaGAGGTGCTGTTGTTGGCTA +
Preference number: 5 (lower is better)
Translates to: VVDQFLVFVLWVHGSKLCRECIR*RCCCWL
Trigger: TAGCCAACAACAGCACCTCAATCTGATACACTCCCG...ACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS TCA 90 bp CATCCTATCAAAGAGGAACCACTGAGGAGTTCCACAAGTGGCGTGTaGAGGGATGACATCATAGGAATTCTCTTCACTTCCACATGGCCA +
Preference number: 5 (lower is better)
Translates to: HPIKEEPLRSSTSGV*RDDIIGILFTSTWP
Trigger: TGGCCATGTGGAAGTGAAGAGAATTCCTATGATGTCATCCCTTCACACGCCACTTGTGGAACTCCTCAGTGGTTCCTCTTTGATAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS GCA 90 bp GAGATAGAACTCTGGATCTCCTCCCGAGAAAGCTGCATAGAATTTTaGACAAAATTTGGAGGTTCATCCCATCCTCCTTCCTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: EIELWISSRESCIEF*TKFGGSSHPPSWVS
Trigger: GGAGACCCAGGAAGGAGGATGGGATGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGAGATCCAGAGTTCTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS CCA 90 bp ATAATTTCCTTCACGACTGGGGCCAAGATCTGTCTCAGGGCATTCTaGCCACGGGCACCACGGTTGAAACTTACAACCATTTTAATAACC +
Preference number: 5 (lower is better)
Translates to: IISFTTGAKICLRAF*PRAPRLKLTTILIT
Trigger: GGTTATTAAAATGGTTGTAAGTTTCAACCGTGGTGCCCGTGGCCAGAATGCCCTGAGACAGATCTTGGCCCCAGTCGTGAAGGAAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGCCTTGAATTTCAGCTaGCGTGAGCAGCTCCTCATA +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKALNFS*REQLLI
Trigger: TATGAGGAGCTGCTCACGCAAGCTGAAATTCAAGGC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGCAATCTTCTCTGATATaGCTGGGCAGCACTGTTTGC +
Preference number: 5 (lower is better)
Translates to: RARGVKNVASGVYQIEVLQSSLI*LGSTVC
Trigger: GCAAACAGTGCTGCCCAGCAATATCAGAGAAGATTG...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGAATGGTCCACGCAAGCTaGGATATCATTCCATGTAAT +
Preference number: 5 (lower is better)
Translates to: KGAVRCFFPSSFWAGSKRMVHAS*DIIPCN
Trigger: ATTACATGGAATGATATCCAAGCTTGCGTGGACCAT...TCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTCTAATCAGCGTGTCTaGGTAATGCTGGGCCACTTC +
Preference number: 5 (lower is better)
Translates to: KNVASGVYQIEVLLLARSSNQRV*VMLGHF
Trigger: GAAGTGGCCCAGCATTACCAAGACACGCTGATTAGA...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGGCTTCTTGGGTGTCTTaGTTGGACTGCCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVASWVS*LDCQIP
Trigger: TGGAATCTGGCAGTCCAACAAAGACACCCAAGAAGC...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTGCTTCTTGGGTGTCTTaGTTGGACTGCCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: KNVASGVYQIEVLLLARSASWVS*LDCQIP
Trigger: TGGAATCTGGCAGTCCAACAAAGACACCCAAGAAGC...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTAATGAGAACTGTGTGGTTTCAACGCCATGAGTTTGTTGGGGCATCCTCTGTGAGGGCACTCAGTGTTTaGCCAACATCACCACTTTCT +
Preference number: 5 (lower is better)
Translates to: VMRTVWFQRHEFVGASSVRALSV*PTSPLS
Trigger: AGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCCT...CACAGAGGATGCCCCAACAAACTCATGGCGTTGAAACCACACAGTTCTCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGGAGCTTGGTGCATCCTaGCCAGGGACTGAATCTTTA +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELELGAS*PGTESL
Trigger: TAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCTC...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTCCTGTCACAATCTCTaGAATCTGATCTACCTTCGA +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWSCHNL*NLIYLR
Trigger: TCGAAGGTAGATCAGATTCAAGAGATTGTGACAGGA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATCCTGTCACAATCTCTaGAATCTGATCTACCTTCGA +
Preference number: 5 (lower is better)
Translates to: LERSCEVLLSFILLGWQQSCHNL*NLIYLR
Trigger: TCGAAGGTAGATCAGATTCAAGAGATTGTGACAGGA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAATGGCTGAGAGAAACTaGTCTGTCACAGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKMAERN*SVTARM
Trigger: CATGCGGGCTGTGACAGACAAGTTTCTCTCAGCCAT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGTTTGGGTCATTTAAATaGCCAGAGCTTTCCCCTATC +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWFGSFK*PELSPI
Trigger: GATAGGGGAAAGCTCTGGCAATTTAAATGACCCAAA...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCTTCTCTTTCTTCTCTaGAAGAGTGAGGTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFLLFLL*KSEVAV
Trigger: GACAGCAACCTCACTCTTCAAGAGAAGAAAGAGAAG...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCCTGGTATTTGTTCTTaGGGTCCACGGTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVPGICS*GPRFQA
Trigger: AGCTTGGAACCGTGGACCCAAAGAACAAATACCAGG...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTCCTGGTATTTGTTCTTaGGGTCCACGGTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: KNVASGVYQIEVLLLARSPGICS*GPRFQA
Trigger: AGCTTGGAACCGTGGACCCAAAGAACAAATACCAGG...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTCCCTGGCAATGTCGTaGATCAGTTCCTGGTATTTG +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLSLAMS*ISSWYL
Trigger: CAAATACCAGGAACTGATCAACGACATTGCCAGGGA...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAAAGAAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGTTGGAGACTTTGCCCTaGCTGGCTAAGTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: GKKDLERSCEVLLSFILLLETLP*LAKLSK
Trigger: CTTGGATAACTTAGCCAGCAAGGGCAAAGTCTCCAA...CAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAACGATCACATAAAAGTCTCCATTaGAACTCCCATGAATTTGGC +
Preference number: 5 (lower is better)
Translates to: GAVRCFFPSSFWAGSKRSHKSLH*NSHEFG
Trigger: GCCAAATTCATGGGAGTTCAAATGGAGACTTTTATG...TGATCGTTTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGCGGGAGTGTATCAGATaGAGGTGCTGTTGTTGGCTA +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELRECIR*RCCCWL
Trigger: TAGCCAACAACAGCACCTCAATCTGATACACTCCCG...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 90 bp CCGCTTGCTGTCTGTGTGATAGGTTCTGAAATACCTGAATGCAGGTaGTGGCAGGGATTTGTTTCTTCAGGAAATTCATCCTGGATCGGA +
Preference number: 5 (lower is better)
Translates to: PLAVCVIGSEIPECR*WQGFVSSGNSSWIG
Trigger: TCCGATCCAGGATGAATTTCCTGAAGAAACAAATCCCTGCCATCACCTGCATTCAGGTATTTCAGAACCTATCACACAGACAGCAAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560373.1
CDS TCA 90 bp CAAAGAGGAACCACTGAGGAGTTCCACAAGTGGCGTGTGAAGGGATaGCATCATAGGAATTCTCTTCACTTCCACATGGCCAAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: QRGTTEEFHKWRVKG*HHRNSLHFHMAKKE
Trigger: TTCCTTTTTGGCCATGTGGAAGTGAAGAGAATTCCTATGATGTCATCCCTTCACACGCCACTTGTGGAACTCCTCAGTGGTTCCTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS CCA 90 bp CTGGTGGCTGGTGTTTCTAGGATTTCAGTCAAGGTCTCTCCTGGCTaGAACCGGATGACATCCACAATTAAACGTTTTGTACTGAAACGA +
Preference number: 5 (lower is better)
Translates to: LVAGVSRISVKVSPG*NRMTSTIKRFVLKR
Trigger: TCGTTTCAGTACAAAACGTTTAATTGTGGATGTCATCCGGTTCCAGCCAGGAGAGACCTTGACTGAAATCCTAGAAACACCAGCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559674.1
CDS-3UTR CAA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTGCCTTGAATTTCAGCTaGCGTGAGCAGCTCCTCATA +
Preference number: 5 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFALNFS*REQLLI
Trigger: TATGAGGAGCTGCTCACGCAAGCTGAAATTCAAGGC...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAATTATGTTCAGGACTTaGTCGCTGCAGGGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKIMFRT*SLQGSQ
Trigger: CTGGCTACCCTGCAGCGACAAAGTCCTGAACATAAT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAACAAGGTCTGGGTAGTGGCGAATCCTTCCATGGCACTCCATGCCTCCCTGAAGCTGCATAGAATTTaGCACAAAATTTGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: KNKVWVVANPSMALHASLKLHRI*HKIWRF
Trigger: GAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTT...CAGGGAGGCATGGAGTGCCATGGAAGGATTCGCCACTACCCAGACCTTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGTATGCCTTCTTCTGCTaGTATCCTCTCCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEYAFFC*YPLHCD
Trigger: GTCACAGTGGAGAGGATACAAGCAGAAGAAGGCATA...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTCCTTGCTCAAAGCCTaGAGACCTCCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELSLLKA*RPPFCL
Trigger: TAAACAGAAGGGAGGTCTCAAGGCTTTGAGCAAGGA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTCCTTGCTCAAAGCCTaGAGACCTCCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVSLLKA*RPPFCL
Trigger: TAAACAGAAGGGAGGTCTCAAGGCTTTGAGCAAGGA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTTCTCTCTCTTCTCCTaGCTCAAAGCCTTGAGACCT +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKFSLFS*LKALRP
Trigger: AGGTCTCAAGGCTTTGAGCAAGGAGAAGAGAGAGAA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCCAGTGCCTCCTTATTaGGGTCATTTAAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLPVPPY*GHLNCQ
Trigger: CTGGCAATTTAAATGACCCAAATAAGGAGGCACTGG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGATCAGTTCCTGGTATTaGTTCTTTGGGTCCACGGTT +
Preference number: 5 (lower is better)
Translates to: RARGVKNVASGVYQIEVLISSWY*FFGSTV
Trigger: AACCGTGGACCCAAAGAACAAATACCAGGAACTGAT...CAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTCCCTGGCAATGTCGTaGATCAGTTCCTGGTATTTG +
Preference number: 5 (lower is better)
Translates to: REELKMWHRECIRLRCCCSLAMS*ISSWYL
Trigger: CAAATACCAGGAACTGATCAACGACATTGCCAGGGA...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTCCCTGGCAATGTCGTaGATCAGTTCCTGGTATTTG +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVSLAMS*ISSWYL
Trigger: CAAATACCAGGAACTGATCAACGACATTGCCAGGGA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGGAGACTTTGCCCTaGCTGGCTAAGTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: KNVASGVYQIEVLLLARSLETLP*LAKLSK
Trigger: CTTGGATAACTTAGCCAGCAAGGGCAAAGTCTCCAA...AGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGGCTTTTTGGAGACTTaGCCCTTGCTGGCTAAGTTA +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKGFLET*PLLAKL
Trigger: TAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCC...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAATTTAAACTGATTCACTaGCAGGTCCTCAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: LERSCEVLLSFILLGWQQFKLIH*QVLNFQ
Trigger: CTGGAAATTGAGGACCTGCAAGTGAATCAGTTTAAA...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAAGGAAGATCAGGAGGTaGACATTTACTTTAGCTCTA +
Preference number: 5 (lower is better)
Translates to: LERSCEVLLSFILLGWQQRKIRR*TFTLAL
Trigger: TAGAGCTAAAGTAAATGTCAACCTCCTGATCTTCCT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 90 bp TTCTGTGCTTCTTGGGTGTCTTTGTTGGACTGCCAGATTCCACCTTaGATTTCATCCAACCATAACACAGCTGACTCATCCTGGATTTCC +
Preference number: 5 (lower is better)
Translates to: FCASWVSLLDCQIPP*ISSNHNTADSSWIS
Trigger: GGAAATCCAGGATGAGTCAGCTGTGTTATGGTTGGATGAAATTCAAGGTGGAATCTGGCAGTCCAACAAAGACACCCAAGAAGCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GAGCATCCATTTCTGCATTCTCATCTCCAGGCACGTCGAACTTGTTGGTCAGGGTACAGTAGATACATCTaGGCATGTTCTTTCGATCAT +
Preference number: 5 (lower is better)
Translates to: EHPFLHSHLQARRTCWSGYSRYI*ACSFDH
Trigger: ATGATCGAAAGAACATGCCAAGATGTATCTACTGTA...CCCTGACCAACAAGTTCGACGTGCCTGGAGATGAGAATGCAGAAATGGATGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGCAGCAAAACTCAGTCTTCATGTaGTTGATTTCTTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LERSCEVLLSFILLGWQQNSVFM*LISSSV
Trigger: CACAGAAGAAGAAATCAACAACATGAAGACTGAGTT...TTGCTGCCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAATCCTTGCTCAAAGCCTaGAGACCTCCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKSLLKA*RPPFCL
Trigger: TAAACAGAAGGGAGGTCTCAAGGCTTTGAGCAAGGA...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTTTCTCTCTCTTCTCCTaGCTCAAAGCCTTGAGACCT +
Preference number: 5 (lower is better)
Translates to: SSWYLFFGSTVPSSVSFFFSLFS*LKALRP
Trigger: AGGTCTCAAGGCTTTGAGCAAGGAGAAGAGAGAGAA...AAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAACCACGGGCACCACGGTaGAAACTTACAACCATTTTA +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKPRAPR*KLTTIL
Trigger: TAAAATGGTTGTAAGTTTCAACCGTGGTGCCCGTGG...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCGGGTCAGTTTTGATGTaGAGAGATTTGTCATCCATA +
Preference number: 5 (lower is better)
Translates to: WHRECIRLRCCCWLGLCFGSVLM*RDLSSI
Trigger: TATGGATGACAAATCTCTCAACATCAAAACTGACCC...GAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACACTCCCGATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCCAGTGCCTCCTTATTaGGGTCATTTAAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKPVPPY*GHLNCQ
Trigger: CTGGCAATTTAAATGACCCAAATAAGGAGGCACTGG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGATCAGTTCCTGGTATTaGTTCTTTGGGTCCACGGTT +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVISSWY*FFGSTV
Trigger: AACCGTGGACCCAAAGAACAAATACCAGGAACTGAT...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp AAGGACCTAGAAAGGAGCTGTGAGGTGCTTCTTTCCTTCATCCTTCTGGGCTGGATCCTACCATCCCTATaGCTAATTAAACAAACACCA +
Preference number: 5 (lower is better)
Translates to: KDLERSCEVLLSFILLGWILPSL*LIKQTP
Trigger: TGGTGTTTGTTTAATTAGCAATAGGGATGGTAGGAT...CCAGCCCAGAAGGATGAAGGAAAGAAGCACCTCACAGCTCCTTTCTAGGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGAAACAGGCAGGTGCCTaGACCCATTCTGAATTTATC +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELKQAGA*THSEFI
Trigger: GATAAATTCAGAATGGGTCAAGGCACCTGCCTGTTT...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTTTAAGGAAACAGGGTaGACACACTTTGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVFKETG*THFGWS
Trigger: GGACCAACCAAAGTGTGTCAACCCTGTTTCCTTAAA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTCTTGGATGTGGCCTTaGGGATTCATAGCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKSWMWP*GFIASF
Trigger: AAAAGAGGCTATGAATCCCAAAGGCCACATCCAAGA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATAACGCCATGAGTTTGTaGGGGCATCCTCTGTGCTAC +
Preference number: 5 (lower is better)
Translates to: VCWGILCATKATILYHHHNAMSL*GHPLCY
Trigger: GTAGCACAGAGGATGCCCCAACAAACTCATGGCGTT...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS TCA 90 bp AACTTTCTCTTAGGCAATCCAATCTCATCCATGGCATTCAACCACTaGATCACATTATCAGTGTGTCTAAAGTGGAGGCCAGTCGCCTTG +
Preference number: 5 (lower is better)
Translates to: NFLLGNPISSMAFNH*ITLSVCLKWRPVAL
Trigger: CAAGGCGACTGGCCTCCACTTTAGACACACTGATAATGTGATTCAGTGGTTGAATGCCATGGATGAGATTGGATTGCCTAAGAGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560418.1
CDS CCA 90 bp TCATGTTCCTCTTGCACCACCAGGTTCACATGGTCCACGCAAGCTTaGATATCATTCCATGTAATGAATTCATTATTCTCTGCATGTGCC +
Preference number: 5 (lower is better)
Translates to: SCSSCTTRFTWSTQA*ISFHVMNSLFSACA
Trigger: GGCACATGCAGAGAATAATGAATTCATTACATGGAATGATATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGTGCAAGAGGAACATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTGGGGCCAGGCCTAGCTaGAACAGGTACAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: AHFTLFCISNCVEGTINLGARPS*NRYKLS
Trigger: ACTCAGTTTGTACCTGTTCAAGCTAGGCCTGGCCCC...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTATGGTCCACGCAAGCTaGGATATCATTCCATGTAAT +
Preference number: 5 (lower is better)
Translates to: REELKMWHRECIRLRCCCMVHAS*DIIPCN
Trigger: ATTACATGGAATGATATCCAAGCTTGCGTGGACCAT...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp CGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGTTCCTGTCACAATCTCTaGAATCTGATCTACCTTCGA +
Preference number: 5 (lower is better)
Translates to: REELKMWHRECIRLRCCCSCHNL*NLIYLR
Trigger: TCGAAGGTAGATCAGATTCAAGAGATTGTGACAGGA...ACAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGTTTGGGTCATTTAAATaGCCAGAGCTTTCCCCTATC +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELFGSFK*PELSPI
Trigger: GATAGGGGAAAGCTCTGGCAATTTAAATGACCCAAA...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGTTTGGGTCATTTAAATaGCCAGAGCTTTCCCCTATC +
Preference number: 5 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEFGSFK*PELSPI
Trigger: GATAGGGGAAAGCTCTGGCAATTTAAATGACCCAAA...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCATAAAAGTCTCCATTaGAACTCCCATGAATTTGGC +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLHKSLH*NSHEFG
Trigger: GCCAAATTCATGGGAGTTCAAATGGAGACTTTTATG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTTGTTGGCTAGGTCTTaGCTTCCAATGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKLLARS*LPMRKE
Trigger: TTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGCTAGAAATGCTTCCTTaGAACATGACTGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKLEMLP*NMTVTS
Trigger: GGAAGTGACAGTCATGTTCAAAGGAAGCATTTCTAG...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp CCTATACTTATTCCCTCAACCACCAGCTTCCCAGTTACATCTATAACATACTCACCAAAAACAGGAGTTTaGTCACCCAGGCTAGAGCAC +
Preference number: 5 (lower is better)
Translates to: PILIPSTTSFPVTSITYSPKTGV*SPRLEH
Trigger: GTGCTCTAGCCTGGGTGACAAAACTCCTGTTTTTGG...TGAGTATGTTATAGATGTAACTGGGAAGCTGGTGGTTGAGGGAATAAGTATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS CCA 90 bp CCTTATTTGGGTCATTTAAATTGCCAGAGCTTTCCCCTGAAGTTTTaGGAGGGTGGAAAGAGTCAGCGTAATAAAGAGAGGAGATATTGG +
Preference number: 5 (lower is better)
Translates to: PYLGHLNCQSFPLKF*EGGKSQRNKERRYW
Trigger: CCAATATCTCCTCTCTTTATTACGCTGACTCTTTCCACCCTCCCAAAACTTCAGGGGAAAGCTCTGGCAATTTAAATGACCCAAATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561461.5
CDS-3UTR CAA 90 bp CTGGCAATGTCGTTGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCATTTGTTTATATTGCCTaGAATTTCAGCTTGCGTGAG +
Preference number: 5 (lower is better)
Translates to: LAMSLISSWYLFFGSTVPFVYIA*NFSLRE
Trigger: CTCACGCAAGCTGAAATTCAAGGCAATATAAACAAA...TGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGAAGCCAGGTCGATATTaGCTAATGCAGAAAATGTAT +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLKPGRY*LMQKMY
Trigger: ATACATTTTCTGCATTAGCAAATATCGACCTGGCTT...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp TTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGCTGACTAGCAGTCCAATTTaGATATCCATGAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: LLARSLLPMRKEGPRKELTSSPI*ISMRLR
Trigger: CCTCAATCTCATGGATATCAAAATTGGACTGCTAGT...CAGCTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATTGTCTCTCTGAAGGGTCAGTTTTGATGTaGAGAGATTTGTCATCCATA +
Preference number: 5 (lower is better)
Translates to: IRANPFLCHRDGVNCLSEGSVLM*RDLSSI
Trigger: TATGGATGACAAATCTCTCAACATCAAAACTGACCC...TTCAGAGAGACAATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCGGGTCAGTTTTGATGTaGAGAGATTTGTCATCCATA +
Preference number: 5 (lower is better)
Translates to: PFISLGFLETLPLLAKLSGSVLM*RDLSSI
Trigger: TATGGATGACAAATCTCTCAACATCAAAACTGACCC...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp AATTTGGCTTTCACTTCGAAGTCTCCAACTTCTTCTGTTGGACTGATTTCAAATCATAGGGCAGTTTGCTaGCCTCTCCTGTCTGAGACT +
Preference number: 5 (lower is better)
Translates to: NLAFTSKSPTSSVGLISNHRAVC*PLLSET
Trigger: AGTCTCAGACAGGAGAGGCAAGCAAACTGCCCTATG...ATTTGAAATCAGTCCAACAGAAGAAGTTGGAGACTTCGAAGTGAAAGCCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp CTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGGAGGACATCACAAGCAGTTaGGAAAAACCGTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: LLLARSLLPMRKEGPRKEDITSS*EKPSEF
Trigger: AAATTCAGACGGTTTTTCCAAACTGCTTGTGATGTC...CTCCTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTTTAAACTGATTCACTaGCAGGTCCTCAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVFKLIH*QVLNFQ
Trigger: CTGGAAATTGAGGACCTGCAAGTGAATCAGTTTAAA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTTTAAACTGATTCACTaGCAGGTCCTCAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKFKLIH*QVLNFQ
Trigger: CTGGAAATTGAGGACCTGCAAGTGAATCAGTTTAAA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp GCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTGTTGCTAAATGACACACATTaGAATCCTACCATCCCTATT +
Preference number: 5 (lower is better)
Translates to: ARGVKNVASGVYQIEVLLLNDTH*NPTIPI
Trigger: AATAGGGATGGTAGGATTCAAATGTGTGTCATTTAG...CAACAGCACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 90 bp ATTCATCAGTTCCAAAACAGTCTTCTCAGCAACACCCTTCTGGATTaGAGCATTAATCAGTGCTACTGCTGCCAATCTTCTCTGATATTG +
Preference number: 5 (lower is better)
Translates to: IHQFQNSLLSNTLLD*SINQCYCCQSSLIL
Trigger: CAATATCAGAGAAGATTGGCAGCAGTAGCACTGATTAATGCTGCAATCCAGAAGGGTGTTGCTGAGAAGACTGTTTTGGAACTGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CCA 90 bp ATGGCTAAAATCCTCTCATGTTCCTCTTGCACCACCAGGTTCACATaGTCCACGCAAGCTTGGATATCATTCCATGTAATGAATTCATTA +
Preference number: 5 (lower is better)
Translates to: MAKILSCSSCTTRFT*STQAWISFHVMNSL
Trigger: TAATGAATTCATTACATGGAATGATATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGTGCAAGAGGAACATGAGAGGATTTTAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGTACAGTAGATACATCTaGGCATGTTCTTTCGATCAT +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVYSRYI*ACSFDH
Trigger: ATGATCGAAAGAACATGCCAAGATGTATCTACTGTA...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGTTTGTTTATATTGCCTaGAATTTCAGCTTGCGTGAG +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKFVYIA*NFSLRE
Trigger: CTCACGCAAGCTGAAATTCAAGGCAATATAAACAAA...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGAAGGACCTAGAAAGAAGCTGCATAGAATTTaGCACAAAATTTGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: VLLLARSLLPMRKEGPRKKLHRI*HKIWRF
Trigger: GAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTT...CTTTCTAGGTCCTTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp CCTTTCATTTCCCTAGGCTTTTTGGAGACTTTGCCCTTGCTGGCTAAGTTATCCAAGCTGCATAGAATTTaGCACAAAATTTGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: PFISLGFLETLPLLAKLSKLHRI*HKIWRF
Trigger: GAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTT...GGATAACTTAGCCAGCAAGGGCAAAGTCTCCAAAAAGCCTAGGGAAATGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633485.1
CDS-3UTR CAA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATTTGATATCCATGAGATaGAGGTCATTCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VCWGILCATKATILYHHHLISMR*RSFSSC
Trigger: GCAGCTGGAGAATGACCTCAATCTCATGGATATCAA...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATACTAGCAGTCCAATTTaGATATCCATGAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNTSSPI*ISMRLR
Trigger: CCTCAATCTCATGGATATCAAAATTGGACTGCTAGT...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAGACATCACAAGCAGTTaGGAAAAACCGTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKDITSS*EKPSEF
Trigger: AAATTCAGACGGTTTTTCCAAACTGCTTGTGATGTC...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS-3UTR CAA 90 bp ATCAGAGCGAGAGGAGTTAAAAATGTGGCATCGGGAGTGTATCAGATTGAGGTGCTAAATGACACACATTaGAATCCTACCATCCCTATT +
Preference number: 5 (lower is better)
Translates to: IRARGVKNVASGVYQIEVLNDTH*NPTIPI
Trigger: AATAGGGATGGTAGGATTCAAATGTGTGTCATTTAG...CACCTCAATCTGATACACTCCCGATGCCACATTTTTAACTCCTCTCGCTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 90 bp GGGCTCTTCAAGATTTACAAGCATGGCATTCGGATTTTTCAAAGCTaGAAATGTGTCGGCTGGAATTCTACGGTCAATAGCTTCATTAAT +
Preference number: 5 (lower is better)
Translates to: GLFKIYKHGIRIFQS*KCVGWNSTVNSFIN
Trigger: ATTAATGAAGCTATTGACCGTAGAATTCCAGCCGACACATTTGCAGCTTTGAAAAATCCGAATGCCATGCTTGTAAATCTTGAAGAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 90 bp TTTTCTTCCTCAATATTGGTAAGACCAGTAACTGAACTGCTCAATTaGTTCCACACTGTATTCACATCTCCTGATTCCAATGCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: FSSSILVRPVTELLN*FHTVFTSPDSNALL
Trigger: CAACAGGGCATTGGAATCAGGAGATGTGAATACAGTGTGGAAGCAATTGAGCAGTTCAGTTACTGGTCTTACCAATATTGAGGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 90 bp CACGCAAGCTTGGATATCATTCCATGTAATGAATTCATTATTCTCTaGATGTGCCTGAGCCTTCAGTTTCATCAACTCATCGAGATACCT +
Preference number: 5 (lower is better)
Translates to: HASLDIIPCNEFIIL*MCLSLQFHQLIEIP
Trigger: AGGTATCTCGATGAGTTGATGAAACTGAAGGCTCAGGCACATGCAGAGAATAATGAATTCATTACATGGAATGATATCCAAGCTTGCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GTGTATCAGATTGAGGTGCTGTTGTTGGCTAGGTCTTTGCTTCCAATGAGGAAAAACTCAGTCTTCATGTaGTTGATTTCTTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: VYQIEVLLLARSLLPMRKNSVFM*LISSSV
Trigger: CACAGAAGAAGAAATCAACAACATGAAGACTGAGTT...TTTCCTCATTGGAAGCAAAGACCTAGCCAACAACAGCACCTCAATCTGATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATAAGCCAGGTCGATATTaGCTAATGCAGAAAATGTAT +
Preference number: 5 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNKPGRY*LMQKMY
Trigger: ATACATTTTCTGCATTAGCAAATATCGACCTGGCTT...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATTTGTTGGCTAGGTCTTaGCTTCCAATGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: VCWGILCATKATILYHHHLLARS*LPMRKE
Trigger: TTCTTTCCTCATTGGAAGCAAAGACCTAGCCAACAA...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp ATGACATTCTACATTAGGGCTAACCCATTCCTCTGCCATAGGGATGGAGTGAATATCCTACCATCCCTATaGCTAATTAAACAAACACCA +
Preference number: 5 (lower is better)
Translates to: MTFYIRANPFLCHRDGVNILPSL*LIKQTP
Trigger: TGGTGTTTGTTTAATTAGCAATAGGGATGGTAGGAT...ATTCACTCCATCCCTATGGCAGAGGAATGGGTTAGCCCTAATGTAGAATGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp CACTGTGTTCAGCCTCAAAGCAATCTTTATTTGTATTCACACTATTATCAGTTCATTTCCACCCCACAGTaGGTAACGCCCAAAACATGC +
Preference number: 5 (lower is better)
Translates to: HCVQPQSNLYLYSHYYQFISTPQ*VTPKTC
Trigger: GCATGTTTTGGGCGTTACCAACTGTGGGGTGGAAAT...GAACTGATAATAGTGTGAATACAAATAAAGATTGCTTTGAGGCTGAACACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559809.2
CDS GCA 90 bp AGCTTGGATATCATTCCATGTAATGAATTCATTATTCTCTGCATGTaGCTGAGCCTTCAGTTTCATCAACTCATCGAGATACCTCTGACA +
Preference number: 5 (lower is better)
Translates to: SLDIIPCNEFIILCM*LSLQFHQLIEIPLT
Trigger: TGTCAGAGGTATCTCGATGAGTTGATGAAACTGAAGGCTCAGGCACATGCAGAGAATAATGAATTCATTACATGGAATGATATCCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS-3UTR CAA 90 bp GTTTGTTGGGGCATCCTCTGTGCTACTAAAGCCACAATTCTATATCATCATCATAGGAAGATCAGGAGGTaGACATTTACTTTAGCTCTA +
Preference number: 5 (lower is better)
Translates to: VCWGILCATKATILYHHHRKIRR*TFTLAL
Trigger: TAGAGCTAAAGTAAATGTCAACCTCCTGATCTTCCT...ATGATGATGATATAGAATTGTGGCTTTAGTAGCACAGAGGATGCCCCAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS-3UTR CAA 90 bp GCGCATTTTACACTATTCTGCATTAGCAATTGTGTTGAGGGAACTATAAACCTTGACATCACAAGCAGTTaGGAAAAACCGTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: AHFTLFCISNCVEGTINLDITSS*EKPSEF
Trigger: AAATTCAGACGGTTTTTCCAAACTGCTTGTGATGTC...AAGGTTTATAGTTCCCTCAACACAATTGCTAATGCAGAATAGTGTAAAATGCGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268182.10
CDS GCA 72 bp GTGCGGCCGGGCCACGCCCAGCCCGTCAACCTCGTCTaGGGCGGACATGGCGGACGAGCCCGAGTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: VRPGHAQPVNLV*GGHGGRARVSA
Trigger: AGCAGAGACTCGGGCTCGTCCGCCATGTCCGCCGCAGACGAGGTTGACGGGCTGGGCGTGGCCCGGCCGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560418.1
ENST00000560738.1
ENST00000633485.1
CDS TCA 72 bp CTGCGGCGGACATGGCGGACGAGCCCGAGTCTCTGCTaGGGAAGCCGTGAAACCTTGGAGGCGCGGACGGCG +
Preference number: 6 (lower is better)
Translates to: LRRTWRTSPSLC*GSRETLEARTA
Trigger: CGCCGTCCGCGCCTCCAAGGTTTCACGGCTTCCTCAGCAGAGACTCGGGCTCGTCCGCCATGTCCGCCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560418.1
ENST00000560738.1
ENST00000633485.1
CDS TCA 72 bp ATGGCGGACGAGCCCGAGTCTCTGCTGAGGAAGCCGTaGAACCTTGGAGGCGCGGACGGCGGTAGCTACAGC +
Preference number: 6 (lower is better)
Translates to: MADEPESLLRKP*NLGGADGGSYS
Trigger: GCTGTAGCTACCGCCGTCCGCGCCTCCAAGGTTTCACGGCTTCCTCAGCAGAGACTCGGGCTCGTCCGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp CGGCAGCGAGCCTGCAGCCTGGTGATCAGGCCTTCATaGGCCAGCCACAGCTGTTCTCGGTTATATGCGGCA +
Preference number: 6 (lower is better)
Translates to: RQRACSLVIRPS*ASHSCSRLYAA
Trigger: TGCCGCATATAACCGAGAACAGCTGTGGCTGGCCAATGAAGGCCTGATCACCAGGCTGCAGGCTCGCTGCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS GCA 72 bp TGTTGCTGCAGTCCTCGAAGCCCCAGGGCTGGTGACTaGAGAGCCCTGAACAAGGCCAGTGCATCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: CCCSPRSPRAGD*RALNKASASPC
Trigger: ACAAGGAGATGCACTGGCCTTGTTCAGGGCTCTGCAGTCACCAGCCCTGGGGCTTCGAGGACTGCAGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 90 bp AAGTATCCACGGCAGCGAGCCTGCAGCCTGGTGATCAGGCCTTCATaGGCCAGCCACAGCTGTTCTCGGTTATATGCGGCAGTCACCCCA +
Preference number: 6 (lower is better)
Translates to: KYPRQRACSLVIRPS*ASHSCSRLYAAVTP
Trigger: TGGGGTGACTGCCGCATATAACCGAGAACAGCTGTGGCTGGCCAATGAAGGCCTGATCACCAGGCTGCAGGCTCGCTGCCGTGGATACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS GCA 72 bp CTCAGGAGCTGCTTCAAGTACCAGTCGCTATTCTGTTaGTGCAGTCCTCGAAGCCCCAGGGCTGGTGACTGC +
Preference number: 6 (lower is better)
Translates to: LRSCFKYQSLFC*CSPRSPRAGDC
Trigger: GCAGTCACCAGCCCTGGGGCTTCGAGGACTGCAGCAACAGAATAGCGACTGGTACTTGAAGCAGCTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 90 bp GCCGGGTCCCCTCTGTCCCCCGAATGCAGTACCCTGGCAATGTCGTaGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACGGTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: AGSPLSPECSTLAMS*ISSWYLFFGSTVPS
Trigger: GCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTCGGGGGACAGAGGGGACCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS GCA 72 bp AGGAGCTGCTTCAAGTACCAGTCGCTATTCTGTTGCTaGAGTCCTCGAAGCCCCAGGGCTGGTGACTGCAGA +
Preference number: 6 (lower is better)
Translates to: RSCFKYQSLFCC*SPRSPRAGDCR
Trigger: TCTGCAGTCACCAGCCCTGGGGCTTCGAGGACTGCAGCAACAGAATAGCGACTGGTACTTGAAGCAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CCA 72 bp GGTAGCCAGCTCCTTCTGATAGAGATCGGCGGCAAATaGATACACCTGGGGCAGCTGGGCTTCGGGATTCAT +
Preference number: 6 (lower is better)
Translates to: GSQLLLIEIGGK*IHLGQLGFGIH
Trigger: ATGAATCCCGAAGCCCAGCTGCCCCAGGTGTATCCATTTGCCGCCGATCTCTATCAGAAGGAGCTGGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 72 bp TATGTGAACAGCTACTGTCTCTCGAGCCTCTCAGCTTaGAACAAGGCCGGGTCCCCTCTGTCCCCCGAATGC +
Preference number: 6 (lower is better)
Translates to: YVNSYCLSSLSA*NKAGSPLSPEC
Trigger: GCATTCGGGGGACAGAGGGGACCCGGCCTTGTTCAAAGCTGAGAGGCTCGAGAGACAGTAGCTGTTCACATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561132.5
CDS CAA 90 bp CTATGCTGTTATGTGAACAGCTACTGTCTCTCGAGCCTCTCAGCTTaGAACAAGGCCGGGTCCCCTCTGTCCCCCGAATGCAGTACCCTG +
Preference number: 6 (lower is better)
Translates to: LCCYVNSYCLSSLSA*NKAGSPLSPECSTL
Trigger: CAGGGTACTGCATTCGGGGGACAGAGGGGACCCGGCCTTGTTCAAAGCTGAGAGGCTCGAGAGACAGTAGCTGTTCACATAACAGCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561132.5
CDS GCA 72 bp GTGGAGAATACCCTGAACTTGGTGGCTCCCAGCCACTaGCTCAACTCTTCATGCGGAGCCAGTTACTCACTG +
Preference number: 6 (lower is better)
Translates to: VENTLNLVAPSH*LNSSCGASYSL
Trigger: CAGTGAGTAACTGGCTCCGCATGAAGAGTTGAGGCAGTGGCTGGGAGCCACCAAGTTCAGGGTATTCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS CCA 72 bp CAAAAGTTAGAACTCTACCTATCAGGGACTCGATGGTaGGCACCTCGCCGAGGTCGTCCAGCAGTTCGTGGA +
Preference number: 6 (lower is better)
Translates to: QKLELYLSGTRW*APRRGRPAVRG
Trigger: TCCACGAACTGCTGGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGTAGAGTTCTAACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558491.1
CDS CCA 72 bp AGGCAAAAGTTAGAACTCTACCTATCAGGGACTCGATaGTGGGCACCTCGCCGAGGTCGTCCAGCAGTTCGT +
Preference number: 6 (lower is better)
Translates to: RQKLELYLSGTR*WAPRRGRPAVR
Trigger: ACGAACTGCTGGACGACCTCGGCGAGGTGCCCACCATCGAGTCCCTGATAGGTAGAGTTCTAACTTTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558491.1
CDS CCA 72 bp AGATTGCCAAGCCCAAGTACCATCTGCTCTGGGACTTaGAGAGAGGAATGGCAACCTCTCTCTGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RLPSPSTICSGT*REEWQPLSACS
Trigger: GCTGCAGGCAGAGAGAGGTTGCCATTCCTCTCTCCAAGTCCCAGAGCAGATGGTACTTGGGCTTGGCAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS CCA 72 bp GCAGCACAGATTGCCAAGCCCAAGTACCATCTGCTCTaGGACTTGGAGAGAGGAATGGCAACCTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: AAQIAKPKYHLL*DLERGMATSLC
Trigger: GCAGAGAGAGGTTGCCATTCCTCTCTCCAAGTCCCAGAGCAGATGGTACTTGGGCTTGGCAATCTGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS CAA 90 bp ATGGTCCCGGAAGTACTGCAGGCGATCTCGATAGCGCTTTCGAGCTaGGTGCATCCTTGCCAGGGACTGAATCTGTGGAAAAGGGATCCT +
Preference number: 6 (lower is better)
Translates to: MVPEVLQAISIALSS*VHPCQGLNLWKRDP
Trigger: AGGATCCCTTTTCCACAGATTCAGTCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTATCGAGATCGCCTGCAGTACTTCCGGGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS GCA 72 bp GCCTTCATTGGCCAGCCACAGCTGTTCTCGGTTATATaGGGCAGTCACCCCAGAGATAGAACTCTGGATCTC +
Preference number: 6 (lower is better)
Translates to: AFIGQPQLFSVI*GSHPRDRTLDL
Trigger: GAGATCCAGAGTTCTATCTCTGGGGTGACTGCCGCATATAACCGAGAACAGCTGTGGCTGGCCAATGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS GCA 72 bp CTGAAGCAGCACAGATTGCCAAGCCCAAGTACCATCTaGTCTGGGACTTGGAGAGAGGAATGGCAACCTCTC +
Preference number: 6 (lower is better)
Translates to: LKQHRLPSPSTI*SGTWREEWQPL
Trigger: GAGAGGTTGCCATTCCTCTCTCCAAGTCCCAGAGCAGATGGTACTTGGGCTTGGCAATCTGTGCTGCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS GCA 72 bp GCGATCTCGATAGCGCTTTCGAGCTTGGTGCATCCTTaGCAGGGACTGAATCTGTGGAAAAGGGATCCTGGA +
Preference number: 6 (lower is better)
Translates to: AISIALSSLVHP*QGLNLWKRDPG
Trigger: TCCAGGATCCCTTTTCCACAGATTCAGTCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTATCGAGATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS CCA 72 bp TTCACGACTGGGGCCAAGATCTGTCTCAGGGCATTCTaGCCACGGGCACCACGGTTGAAACTTACAACCATT +
Preference number: 6 (lower is better)
Translates to: FTTGAKICLRAF*PRAPRLKLTTI
Trigger: AATGGTTGTAAGTTTCAACCGTGGTGCCCGTGGCCAGAATGCCCTGAGACAGATCTTGGCCCCAGTCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp CTGGGCTTTCTCTCTCTTCGCTCTAATCAGCGTGTCTaGGTAATGCTGGGCCACTTCTGCAAGGACTCCCTC +
Preference number: 6 (lower is better)
Translates to: LGFLSLRSNQRV*VMLGHFCKDSL
Trigger: GAGGGAGTCCTTGCAGAAGTGGCCCAGCATTACCAAGACACGCTGATTAGAGCGAAGAGAGAGAAAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS TCA 72 bp CTCTGTCCCCCGAATGCAGTACCCTGGCAATGTCGTTaGTCAGTTCCTGGTATTTGTTCTTTGGGTCCACGG +
Preference number: 6 (lower is better)
Translates to: LCPPNAVPWQCR*SVPGICSLGPR
Trigger: CCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTCGGGGGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS GCA 72 bp TGCCAATCTTCTCTGATATTGCTGGGCAGCACTGTTTaGAGCATCCACTCCAGACTGCAGCTCCTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: CQSSLILLGSTV*SIHSRLQLLLL
Trigger: CAGAAGGAGGAGCTGCAGTCTGGAGTGGATGCTGCAAACAGTGCTGCCCAGCAATATCAGAGAAGATTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 72 bp AGCAGCTCATCCTCACCAGCATCAGGGAACTTCTCATaGAACGAGTCCTTCAGCACTTTGGCAATGAAGCGC +
Preference number: 6 (lower is better)
Translates to: SSSSSPASGNFS*NESFSTLAMKR
Trigger: GCGCTTCATTGCCAAAGTGCTGAAGGACTCGTTGCATGAGAAGTTCCCTGATGCTGGTGAGGATGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CCA 72 bp GATGACAACATCTCCACTGCGACAGAGAGCTCTGGGTaGGTGAGATTATGTTCAGGACTTTGTCGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: DDNISTATESSG*VRLCSGLCRCR
Trigger: CCTGCAGCGACAAAGTCCTGAACATAATCTCACCCACCCAGAGCTCTCTGTCGCAGTGGAGATGTTGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 72 bp CTGCCAATCTTCTCTGATATTGCTGGGCAGCACTGTTaGCAGCATCCACTCCAGACTGCAGCTCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LPIFSDIAGQHC*QHPLQTAAPPS
Trigger: AGAAGGAGGAGCTGCAGTCTGGAGTGGATGCTGCAAACAGTGCTGCCCAGCAATATCAGAGAAGATTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 72 bp CCTCTGTCCCCCGAATGCAGTACCCTGGCAATGTCGTaGATCAGTTCCTGGTATTTGTTCTTTGGGTCCACG +
Preference number: 6 (lower is better)
Translates to: PLSPECSTLAMS*ISSWYLFFGST
Trigger: CGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTCGGGGGACAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS CAA 72 bp GAAGTACTGCAGGCGATCTCGATAGCGCTTTCGAGCTaGGTGCATCCTTGCCAGGGACTGAATCTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: EVLQAISIALSS*VHPCQGLNLWK
Trigger: TTTCCACAGATTCAGTCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTATCGAGATCGCCTGCAGTACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS TCA 72 bp CAAGATCACTGTGGTAAGTTTCACCACACTCAGGGATaGCTCCATACAAGCCAACATCAGGGGAGCGAAGGG +
Preference number: 6 (lower is better)
Translates to: QDHCGKFHHTQG*LHTSQHQGSEG
Trigger: CCCTTCGCTCCCCTGATGTTGGCTTGTATGGAGTCATCCCTGAGTGTGGTGAAACTTACCACAGTGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 72 bp GCCTGCAGCACTTACATCCTATCAAAGAGGAACCACTaGGGAGTTCCACAAGTGGCGTGTGAAGGGATGACA +
Preference number: 6 (lower is better)
Translates to: ACSTYILSKRNH*GVPQVACEGMT
Trigger: TGTCATCCCTTCACACGCCACTTGTGGAACTCCTCAGTGGTTCCTCTTTGATAGGATGTAAGTGCTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS TCA 72 bp ACTGCCTCAACTCTTCATGCGGAGCCAGTTACTCACTaGGAGTCTTGTAGTCATCCCGAGCTTTGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: TASTLHAEPVTH*ESCSHPELCLP
Trigger: GGGCAAACAAAGCTCGGGATGACTACAAGACTCTCAGTGAGTAACTGGCTCCGCATGAAGAGTTGAGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS GCA 72 bp CTCTGGGACTTGGAGAGAGGAATGGCAACCTCTCTCTaGCTGCAGCACTTACATCCTATCAAAGAGGAACCA +
Preference number: 6 (lower is better)
Translates to: LWDLERGMATSL*LQHLHPIKEEP
Trigger: TGGTTCCTCTTTGATAGGATGTAAGTGCTGCAGGCAGAGAGAGGTTGCCATTCCTCTCTCCAAGTCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS CAA 72 bp CACACTGTATTCACATCTCCTGATTCCAATGCCCTGTaGATCAGGGCCACCGATGACAACATCTCCACTGCG +
Preference number: 6 (lower is better)
Translates to: HTVFTSPDSNAL*IRATDDNISTA
Trigger: CGCAGTGGAGATGTTGTCATCGGTGGCCCTGATCAACAGGGCATTGGAATCAGGAGATGTGAATACAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 72 bp GAAGTACTGCAGGCGATCTCGATAGCGCTTTCGAGCTaGGTGCATCCTTGCCAGGGACTGAATCTTTACAAC +
Preference number: 6 (lower is better)
Translates to: EVLQAISIALSS*VHPCQGLNLYN
Trigger: GTTGTAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTATCGAGATCGCCTGCAGTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 90 bp AATTGCTTCCACACTGTATTCACATCTCCTGATTCCAATGCCCTGTaGATCAGGGCCACCGATGACAACATCTCCACTGCGACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: NCFHTVFTSPDSNAL*IRATDDNISTATES
Trigger: GCTCTCTGTCGCAGTGGAGATGTTGTCATCGGTGGCCCTGATCAACAGGGCATTGGAATCAGGAGATGTGAATACAGTGTGGAAGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 90 bp ATGGTCCCGGAAGTACTGCAGGCGATCTCGATAGCGCTTTCGAGCTaGGTGCATCCTTGCCAGGGACTGAATCTTTACAACTTCATCTTT +
Preference number: 6 (lower is better)
Translates to: MVPEVLQAISIALSS*VHPCQGLNLYNFIF
Trigger: AAAGATGAAGTTGTAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTATCGAGATCGCCTGCAGTACTTCCGGGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 90 bp GGGGCCAAGATCTGTCTCAGGGCATTCTGGCCACGGGCACCACGGTaGAAACTTACAACCATTTTAATAACCGTAGGATTTCCTGTCACA +
Preference number: 6 (lower is better)
Translates to: GAKICLRAFWPRAPR*KLTTILITVGFPVT
Trigger: TGTGACAGGAAATCCTACGGTTATTAAAATGGTTGTAAGTTTCAACCGTGGTGCCCGTGGCCAGAATGCCCTGAGACAGATCTTGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 90 bp AGTACTGCAGGCGATCTCGATAGCGCTTTCGAGCTTGGTGCATCCTaGCCAGGGACTGAATCTGTGGAAAAGGGATCCTGGAAATTAGAA +
Preference number: 6 (lower is better)
Translates to: STAGDLDSAFELGAS*PGTESVEKGSWKLE
Trigger: TTCTAATTTCCAGGATCCCTTTTCCACAGATTCAGTCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTATCGAGATCGCCTGCAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS TCA 72 bp ACACTGTATTCACATCTCCTGATTCCAATGCCCTGTTaGTCAGGGCCACCGATGACAACATCTCCACTGCGA +
Preference number: 6 (lower is better)
Translates to: TLYSHLLIPMPC*SGPPMTTSPLR
Trigger: TCGCAGTGGAGATGTTGTCATCGGTGGCCCTGATCAACAGGGCATTGGAATCAGGAGATGTGAATACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS TCA 72 bp CTGAGAGAAACTTGTCTGTCACAGCCCGCATGTTCCTaGTGGAGCTGTCTAGCCGTGTCTTCACTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: LRETCLSQPACS*WSCLAVSSLLH
Trigger: ATGAAGAAGTGAAGACACGGCTAGACAGCTCCATCAGGAACATGCGGGCTGTGACAGACAAGTTTCTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 72 bp CCCATAAGGGATTTTGTCCACAGAGCTGACAATGGCTaGGAGAAACTTGTCTGTCACAGCCCGCATGTTCCT +
Preference number: 6 (lower is better)
Translates to: PIRDFVHRADNG*EKLVCHSPHVP
Trigger: AGGAACATGCGGGCTGTGACAGACAAGTTTCTCTCAGCCATTGTCAGCTCTGTGGACAAAATCCCTTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS TCA 72 bp ACCACTGAGGAGTTCCACAAGTGGCGTGTGAAGGGATaGCATCATAGGAATTCTCTTCACTTCCACATGGCC +
Preference number: 6 (lower is better)
Translates to: TTEEFHKWRVKG*HHRNSLHFHMA
Trigger: GGCCATGTGGAAGTGAAGAGAATTCCTATGATGTCATCCCTTCACACGCCACTTGTGGAACTCCTCAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS CCA 72 bp CGGTTATATGCGGCAGTCACCCCAGAGATAGAACTCTaGATCTCCTCCCGAGAAAGCTGCATAGAATTTTGC +
Preference number: 6 (lower is better)
Translates to: RLYAAVTPEIEL*ISSRESCIEFC
Trigger: GCAAAATTCTATGCAGCTTTCTCGGGAGGAGATCCAGAGTTCTATCTCTGGGGTGACTGCCGCATATAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS CCA 72 bp GTTGAGAGATTTGTCATCCATAATTTCCTTCACGACTaGGGCCAAGATCTGTCTCAGGGCATTCTGGCCACG +
Preference number: 6 (lower is better)
Translates to: VERFVIHNFLHD*GQDLSQGILAT
Trigger: CGTGGCCAGAATGCCCTGAGACAGATCTTGGCCCCAGTCGTGAAGGAAATTATGGATGACAAATCTCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp ATTTTGTCCACAGAGCTGACAATGGCTGAGAGAAACTaGTCTGTCACAGCCCGCATGTTCCTGATGGAGCTG +
Preference number: 6 (lower is better)
Translates to: ILSTELTMAERN*SVTARMFLMEL
Trigger: CAGCTCCATCAGGAACATGCGGGCTGTGACAGACAAGTTTCTCTCAGCCATTGTCAGCTCTGTGGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CCA 72 bp GAATGCAGTACCCTGGCAATGTCGTTGATCAGTTCCTaGTATTTGTTCTTTGGGTCCACGGTTCCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: ECSTLAMSLISS*YLFFGSTVPSS
Trigger: AGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS CAA 72 bp AAGCCAACATCAGGGGAGCGAAGGGCACTCAGTGTTTaGCCAACATCACCACTTTCTACTGCCTCATTAATG +
Preference number: 6 (lower is better)
Translates to: KPTSGERRALSV*PTSPLSTASLM
Trigger: CATTAATGAGGCAGTAGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCCTTCGCTCCCCTGATGTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp GGCGATCTCGATAGCGCTTTCGAGCTTGGTGCATCCTaGCCAGGGACTGAATCTTTACAACTTCATCTTTGT +
Preference number: 6 (lower is better)
Translates to: GDLDSAFELGAS*PGTESLQLHLC
Trigger: ACAAAGATGAAGTTGTAAAGATTCAGTCCCTGGCAAGGATGCACCAAGCTCGAAAGCGCTATCGAGATCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp AGTACCCTGGCAATGTCGTTGATCAGTTCCTGGTATTaGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGC +
Preference number: 6 (lower is better)
Translates to: STLAMSLISSWY*FFGSTVPSSVS
Trigger: GCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS CAA 72 bp GTCTTAGCCAGTGCCTCCTTATTTGGGTCATTTAAATaGCCAGAGCTTTCCCCTGAAGTTTTGGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: VLASASLFGSFK*PELSPEVLGGW
Trigger: CCACCCTCCCAAAACTTCAGGGGAAAGCTCTGGCAATTTAAATGACCCAAATAAGGAGGCACTGGCTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561461.5
CDS CAA 90 bp GACACTTCCGTCTTAGCCAGTGCCTCCTTATTTGGGTCATTTAAATaGCCAGAGCTTTCCCCTGAAGTTTTGGGAGGGTGGAAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: DTSVLASASLFGSFK*PELSPEVLGGWKES
Trigger: TGACTCTTTCCACCCTCCCAAAACTTCAGGGGAAAGCTCTGGCAATTTAAATGACCCAAATAAGGAGGCACTGGCTAAGACGGAAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561461.5
CDS CAA 90 bp AGAAAATACAGGTCAAAAGTACTTCTGCAGCTGAAGCAGCACAGATaGCCAAGCCCAAGTACCATCTGCTCTGGGACTTGGAGAGAGGAA +
Preference number: 6 (lower is better)
Translates to: RKYRSKVLLQLKQHR*PSPSTICSGTWREE
Trigger: TTCCTCTCTCCAAGTCCCAGAGCAGATGGTACTTGGGCTTGGCAATCTGTGCTGCTTCAGCTGCAGAAGTACTTTTGACCTGTATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561086.1
CDS CAA 90 bp ACTCCATACAAGCCAACATCAGGGGAGCGAAGGGCACTCAGTGTTTaGCCAACATCACCACTTTCTACTGCCTCATTAATGGCAAAGATT +
Preference number: 6 (lower is better)
Translates to: TPYKPTSGERRALSV*PTSPLSTASLMAKI
Trigger: AATCTTTGCCATTAATGAGGCAGTAGAAAGTGGTGATGTTGGCAAAACACTGAGTGCCCTTCGCTCCCCTGATGTTGGCTTGTATGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 90 bp AGAGATAGAACTCTGGATCTCCTCCCGAGAAAGCTGCATAGAATTTaGCACAAAATTTGGAGGTTCATCCCATCCTCCTTCCTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: RDRTLDLLPRKLHRI*HKIWRFIPSSFLGL
Trigger: GAGACCCAGGAAGGAGGATGGGATGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGAGATCCAGAGTTCTATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS CAA 90 bp CCCGAATGCAGTACCCTGGCAATGTCGTTGATCAGTTCCTGGTATTaGTTCTTTGGGTCCACGGTTCCAAGCTCTGTTAGCTTCTTTAAA +
Preference number: 6 (lower is better)
Translates to: PECSTLAMSLISSWY*FFGSTVPSSVSFFK
Trigger: TTTAAAGAAGCTAACAGAGCTTGGAACCGTGGACCCAAAGAACAAATACCAGGAACTGATCAACGACATTGCCAGGGTACTGCATTCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561132.5
CDS GCA 72 bp ATTAAACCAATGGCTAAAATCCTCTCATGTTCCTCTTaGACCACCAGGTTCACATGGTCCACGCAAGCTTGG +
Preference number: 6 (lower is better)
Translates to: IKPMAKILSCSS*TTRFTWSTQAW
Trigger: CCAAGCTTGCGTGGACCATGTGAACCTGGTGGTGCAAGAGGAACATGAGAGGATTTTAGCCATTGGTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 72 bp CTCTGGATCTCCTCCCGAGAAAGCTGCATAGAATTTTaGACAAAATTTGGAGGTTCATCCCATCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LWISSRESCIEF*TKFGGSSHPPS
Trigger: GGAAGGAGGATGGGATGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGAGATCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS CCA 72 bp ATCCTCTCATGTTCCTCTTGCACCACCAGGTTCACATaGTCCACGCAAGCTTGGATATCATTCCATGTAATG +
Preference number: 6 (lower is better)
Translates to: ILSCSSCTTRFT*STQAWISFHVM
Trigger: CATTACATGGAATGATATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGTGCAAGAGGAACATGAGAGGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CCA 72 bp CTAAGGCAAACTTCTGTGCTTCTTGGGTGTCTTTGTTaGACTGCCAGATTCCACGTCTCCTTTCATCCATCT +
Preference number: 6 (lower is better)
Translates to: LRQTSVLLGCLC*TARFHVSFHPS
Trigger: AGATGGATGAAAGGAGACGTGGAATCTGGCAGTCCAACAAAGACACCCAAGAAGCACAGAAGTTTGCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560738.1
CDS CCA 72 bp CCTTCATCTCAACACGTGTTATACCTGTGCCCCTCATaGAGAAACCCTGTTCAGGCTACCATACCTTTACAA +
Preference number: 6 (lower is better)
Translates to: PSSQHVLYLCPS*RNPVQATIPLQ
Trigger: TTGTAAAGGTATGGTAGCCTGAACAGGGTTTCTCCATGAGGGGCACAGGTATAACACGTGTTGAGATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS CAA 72 bp ATTCCTAAGGCAAACTTCTGTGCTTCTTGGGTGTCTTaGTTGGACTGCCAGATTCCACGTCTCCTTTCATCC +
Preference number: 6 (lower is better)
Translates to: IPKANFCASWVS*LDCQIPRLLSS
Trigger: GGATGAAAGGAGACGTGGAATCTGGCAGTCCAACAAAGACACCCAAGAAGCACAGAAGTTTGCCTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560738.1
CDS TCA 72 bp TCTTGGGTGTCTTTGTTGGACTGCCAGATTCCACCTTaGATTTCATCCAACCATAACACAGCTGACTCATCC +
Preference number: 6 (lower is better)
Translates to: SWVSLLDCQIPP*ISSNHNTADSS
Trigger: GGATGAGTCAGCTGTGTTATGGTTGGATGAAATTCAAGGTGGAATCTGGCAGTCCAACAAAGACACCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CCA 72 bp GGTCATTTAAATTGCCAGAGCTTTCCCCTGAAGTTTTaGGAGGGTGGAAAGAGTCAGCGTAATAAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GHLNCQSFPLKF*EGGKSQRNKER
Trigger: CCTCTCTTTATTACGCTGACTCTTTCCACCCTCCCAAAACTTCAGGGGAAAGCTCTGGCAATTTAAATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559031.1
ENST00000561461.5
CDS CAA 72 bp ACTCTGGATCTCCTCCCGAGAAAGCTGCATAGAATTTaGCACAAAATTTGGAGGTTCATCCCATCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TLDLLPRKLHRI*HKIWRFIPSSF
Trigger: GAAGGAGGATGGGATGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGAGATCCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS CAA 90 bp CTCATGTTCCTCTTGCACCACCAGGTTCACATGGTCCACGCAAGCTaGGATATCATTCCATGTAATGAATTCATTATTCTCTGCATGTGC +
Preference number: 6 (lower is better)
Translates to: LMFLLHHQVHMVHAS*DIIPCNEFIILCMC
Trigger: GCACATGCAGAGAATAATGAATTCATTACATGGAATGATATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGTGCAAGAGGAACATGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 72 bp CTGCTTAGCCTGGTAAAGTATATCCTGGTAAGTGGATaGCAAGGGCTCTTCAAGATTTACAAGCATGGCATT +
Preference number: 6 (lower is better)
Translates to: LLSLVKYILVSG*QGLFKIYKHGI
Trigger: AATGCCATGCTTGTAAATCTTGAAGAGCCCTTGGCATCCACTTACCAGGATATACTTTACCAGGCTAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 72 bp TTCCAAAACAGTCTTCTCAGCAACACCCTTCTGGATTaGAGCATTAATCAGTGCTACTGCTGCCAATCTTCT +
Preference number: 6 (lower is better)
Translates to: FQNSLLSNTLLD*SINQCYCCQSS
Trigger: AGAAGATTGGCAGCAGTAGCACTGATTAATGCTGCAATCCAGAAGGGTGTTGCTGAGAAGACTGTTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 72 bp CCAGAGATAGAACTCTGGATCTCCTCCCGAGAAAGCTaGATAGAATTTTGCACAAAATTTGGAGGTTCATCC +
Preference number: 6 (lower is better)
Translates to: PEIELWISSRES*IEFCTKFGGSS
Trigger: GGATGAACCTCCAAATTTTGTGCAAAATTCTATGCAGCTTTCTCGGGAGGAGATCCAGAGTTCTATCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000560373.1
ENST00000560738.1
ENST00000633485.1
CDS CCA 72 bp ATCAGTTCCAAAACAGTCTTCTCAGCAACACCCTTCTaGATTGCAGCATTAATCAGTGCTACTGCTGCCAAT +
Preference number: 6 (lower is better)
Translates to: ISSKTVFSATPF*IAALISATAAN
Trigger: ATTGGCAGCAGTAGCACTGATTAATGCTGCAATCCAGAAGGGTGTTGCTGAGAAGACTGTTTTGGAACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS TCA 72 bp TTAGGCAATCCAATCTCATCCATGGCATTCAACCACTaGATCACATTATCAGTGTGTCTAAAGTGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LGNPISSMAFNH*ITLSVCLKWRP
Trigger: TGGCCTCCACTTTAGACACACTGATAATGTGATTCAGTGGTTGAATGCCATGGATGAGATTGGATTGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268182.10
ENST00000559682.1
ENST00000560418.1
ENST00000633485.1
CDS TCA 72 bp GTCTGTGTGATAGGTTCTGAAATACCTGAATGCAGGTaGTGGCAGGGATTTGTTTCTTCAGGAAATTCATCC +
Preference number: 6 (lower is better)
Translates to: VCVIGSEIPECR*WQGFVSSGNSS
Trigger: GGATGAATTTCCTGAAGAAACAAATCCCTGCCATCACCTGCATTCAGGTATTTCAGAACCTATCACACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560373.1
CDS GCA 72 bp ATTTTGATATCCATGAGATTGAGGTCATTCTCCAGCTaGTGGTTAGAACGAATGAGGGTGATAACCTCTTCC +
Preference number: 6 (lower is better)
Translates to: ILISMRLRSFSS*WLERMRVITSS
Trigger: GGAAGAGGTTATCACCCTCATTCGTTCTAACCAGCAGCTGGAGAATGACCTCAATCTCATGGATATCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268182.10
ENST00000560020.1
ENST00000560733.1
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp CTCTTGCACCACCAGGTTCACATGGTCCACGCAAGCTaGGATATCATTCCATGTAATGAATTCATTATTCTC +
Preference number: 6 (lower is better)
Translates to: LLHHQVHMVHAS*DIIPCNEFIIL
Trigger: GAGAATAATGAATTCATTACATGGAATGATATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGTGCAAGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 90 bp AGGTGGACAAATTTTCGGACCACAACCATAGGAGGATCCTCAGCATaGACTGACAGAAAGTATGCATCAAAGAATGGAGTTAGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: RWTNFRTTTIGGSSA*TDRKYASKNGVSRK
Trigger: TTTTCTGCTAACTCCATTCTTTGATGCATACTTTCTGTCAGTCAATGCTGAGGATCCTCCTATGGTTGTGGTCCGAAAATTTGTCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560733.1
CDS GCA 72 bp AAGATTTACAAGCATGGCATTCGGATTTTTCAAAGCTaGAAATGTGTCGGCTGGAATTCTACGGTCAATAGC +
Preference number: 6 (lower is better)
Translates to: KIYKHGIRIFQS*KCVGWNSTVNS
Trigger: GCTATTGACCGTAGAATTCCAGCCGACACATTTGCAGCTTTGAAAAATCCGAATGCCATGCTTGTAAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 72 bp CTCACTGAGAGTCTTGTAGTCATCCCGAGCTTTGTTTaGCCGAATAAAAGCCTGGATTTTGATAATGTCATT +
Preference number: 6 (lower is better)
Translates to: LTESLVVIPSFV*PNKSLDFDNVI
Trigger: AATGACATTATCAAAATCCAGGCTTTTATTCGGGCAAACAAAGCTCGGGATGACTACAAGACTCTCAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS CCA 72 bp TCTTGCACCACCAGGTTCACATGGTCCACGCAAGCTTaGATATCATTCCATGTAATGAATTCATTATTCTCT +
Preference number: 6 (lower is better)
Translates to: SCTTRFTWSTQA*ISFHVMNSLFS
Trigger: AGAGAATAATGAATTCATTACATGGAATGATATCCAAGCTTGCGTGGACCATGTGAACCTGGTGGTGCAAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 72 bp AATTTTCGGACCACAACCATAGGAGGATCCTCAGCATaGACTGACAGAAAGTATGCATCAAAGAATGGAGTT +
Preference number: 6 (lower is better)
Translates to: NFRTTTIGGSSA*TDRKYASKNGV
Trigger: AACTCCATTCTTTGATGCATACTTTCTGTCAGTCAATGCTGAGGATCCTCCTATGGTTGTGGTCCGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560733.1
CDS CAA 90 bp AATAGAGGAGGTGACAATTACAACACTTTTCTGTCACATTCCCTTTaGATCTTCCAGGCAAAAGTTAGAACTCTACCTATCAGGGACTCG +
Preference number: 6 (lower is better)
Translates to: NRGGDNYNTFLSHSL*IFQAKVRTLPIRDS
Trigger: CGAGTCCCTGATAGGTAGAGTTCTAACTTTTGCCTGGAAGATCAAAAGGGAATGTGACAGAAAAGTGTTGTAATTGTCACCTCCTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558491.1
CDS TCA 72 bp TTCCATGTAATGAATTCATTATTCTCTGCATGTGCCTaGGCCTTCAGTTTCATCAACTCATCGAGATACCTC +
Preference number: 6 (lower is better)
Translates to: FHVMNSLFSACA*AFSFINSSRYL
Trigger: GAGGTATCTCGATGAGTTGATGAAACTGAAGGCTCAGGCACATGCAGAGAATAATGAATTCATTACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 72 bp GAGAATAATTTTACAGGTAGAATGAGAACAGGTTGTTaGAGGGTTATGCCACAACAGCTGGAACAAAGCCTA +
Preference number: 6 (lower is better)
Translates to: ENNFTGRMRTGC*RVMPQQLEQSL
Trigger: TAGGCTTTGTTCCAGCTGTTGTGGCATAACCCTCAAACAACCTGTTCTCATTCTACCTGTAAAATTATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559682.1
CDS TCA 72 bp TATGCCTTCTTCTGCTTGTATCCTCTCCACTGTGACTaGAACAGTCAAATGTTACAGAAGACATATTACTTC +
Preference number: 6 (lower is better)
Translates to: YAFFCLYPLHCD*NSQMLQKTYYF
Trigger: GAAGTAATATGTCTTCTGTAACATTTGACTGTTTCAGTCACAGTGGAGAGGATACAAGCAGAAGAAGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558003.1
CDS GCA 72 bp TCAATATTGGTAAGACCAGTAACTGAACTGCTCAATTaGTTCCACACTGTATTCACATCTCCTGATTCCAAT +
Preference number: 6 (lower is better)
Translates to: SILVRPVTELLN*FHTVFTSPDSN
Trigger: ATTGGAATCAGGAGATGTGAATACAGTGTGGAAGCAATTGAGCAGTTCAGTTACTGGTCTTACCAATATTGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS GCA 72 bp ATTGATGAGAGTCTTGTAGTCATCCCGAGCTTTGTTTaGCCGAATAAAAGCCTGGATTTTGATAATGTCATT +
Preference number: 6 (lower is better)
Translates to: IDESLVVIPSFV*PNKSLDFDNVI
Trigger: AATGACATTATCAAAATCCAGGCTTTTATTCGGGCAAACAAAGCTCGGGATGACTACAAGACTCTCATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp GGTGACAATTACAACACTTTTCTGTCACATTCCCTTTaGATCTTCCAGGCAAAAGTTAGAACTCTACCTATC +
Preference number: 6 (lower is better)
Translates to: GDNYNTFLSHSL*IFQAKVRTLPI
Trigger: GATAGGTAGAGTTCTAACTTTTGCCTGGAAGATCAAAAGGGAATGTGACAGAAAAGTGTTGTAATTGTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558491.1
CDS GCA 72 bp TTGGATATCATTCCATGTAATGAATTCATTATTCTCTaGATGTGCCTGAGCCTTCAGTTTCATCAACTCATC +
Preference number: 6 (lower is better)
Translates to: LDIIPCNEFIIL*MCLSLQFHQLI
Trigger: GATGAGTTGATGAAACTGAAGGCTCAGGCACATGCAGAGAATAATGAATTCATTACATGGAATGATATCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268182.10
ENST00000633485.1
CDS CAA 72 bp CATTTTAATAACCGTAGGATTTCCTGTCACAATCTCTaGAATCTGATCTACCTTCGACTTGATTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: HFNNRRISCHNL*NLIYLRLDFLL
Trigger: CAAGAGGAAATCAAGTCGAAGGTAGATCAGATTCAAGAGATTGTGACAGGAAATCCTACGGTTATTAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268182.10
ENST00000560738.1
ENST00000633485.1
CDS CAA 72 bp AGGCAAGAAGTGCTAACTTCAGAAATATGCCCACATTaGCAAAATGACATATGTACAAGAGGTTATTTGCTG +
Preference number: 6 (lower is better)
Translates to: RQEVLTSEICPH*QNDICTRGYLL
Trigger: CAGCAAATAACCTCTTGTACATATGTCATTTTGCAAATGTGGGCATATTTCTGAAGTTAGCACTTCTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558957.1
CDS CAA 90 bp AAAGATTCTGAGAATAATTTTACAGGTAGAATGAGAACAGGTTGTTaGAGGGTTATGCCACAACAGCTGGAACAAAGCCTAAACTATTAT +
Preference number: 6 (lower is better)
Translates to: KDSENNFTGRMRTGC*RVMPQQLEQSLNYY
Trigger: ATAATAGTTTAGGCTTTGTTCCAGCTGTTGTGGCATAACCCTCAAACAACCTGTTCTCATTCTACCTGTAAAATTATTCTCAGAATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559682.1