RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQCH (Homo sapiens)

Ensembl gene IDs: ENSG00000103599

Ensembl transcript IDs: ENST00000335894.9, ENST00000358767.7, ENST00000512104.5, ENST00000514049.5, ENST00000535744.5, ENST00000546225.5, ENST00000558759.1, ENST00000559172.1, ENST00000559568.5, ENST00000560497.1, ENST00000560790.1, ENST00000561339.1, ENST00000629425.2

Found 731 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGACTGGTTGCCAGCATCGGCATTGACAGCGCACTCATGCATTTaGTTTTCTTCCTTTCCTTTGGAACAAAGCGGGGCACTTCCAGGG +
Preference number: 1 (lower is better)
Translates to: SDWLPASALTAHSCI*FSSFPLEQSGALPG
Trigger: CCCTGGAAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAAACCAAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAACCAGTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 90 bp CTCAAACTGCAATCCAGATGGCCGTTTGTCAGGTATAAGGTGAGTTaGGTCAGGGCCAGCTGGTCACTATATGCGAGGTTAAGGCCGGTT +
Preference number: 1 (lower is better)
Translates to: LKLQSRWPFVRYKVS*VRASWSLYARLRPV
Trigger: AACCGGCCTTAACCTCGCATATAGTGACCAGCTGGCCCTGACTCAACTCACCTTATACCTGACAAACGGCCATCTGGATTGCAGTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 90 bp GATTGTGCCAGTGAACTAATGAGTCTCTTGGACCTTATGTTGCTCTaGCTTCAGTCGAGGCGCGGCTCTAATGGGCATGTAGGACTTCCT +
Preference number: 1 (lower is better)
Translates to: DCASELMSLLDLMLL*LQSRRGSNGHVGLP
Trigger: AGGAAGTCCTACATGCCCATTAGAGCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR TCA 90 bp CATCTCTCATTCTGCAGGCTTTTCCAATTTGGAGGCACAAATAAGTaGGAACTTGGGGATCCACTGAGGTCTGAGGCACGGTGGTACCAG +
Preference number: 1 (lower is better)
Translates to: HLSFCRLFQFGGTNK*ELGDPLRSEARWYQ
Trigger: CTGGTACCACCGTGCCTCAGACCTCAGTGGATCCCCAAGTTCTCACTTATTTGTGCCTCCAAATTGGAAAAGCCTGCAGAATGAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 90 bp CTCTATCAGCATGTCCACTGTGAGGTTGGTGACATTGTCTGCAGGTaGGAATGCTTCGATCACACCCCCTTGACTGAGAAATGTTTGGAG +
Preference number: 1 (lower is better)
Translates to: LYQHVHCEVGDIVCR*ECFDHTPLTEKCLE
Trigger: CTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGACAATGTCACCAACCTCACAGTGGACATGCTGATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 90 bp CTAAGATGTCACACAGCCTCCCCAGCTGCATGTTCTGCTGTGTGTTaGAATCGGCAATATGTTCTCTCACAGGCTGGGAATACCCTAATG +
Preference number: 1 (lower is better)
Translates to: LRCHTASPAACSAVC*NRQYVLSQAGNTLM
Trigger: CATTAGGGTATTCCCAGCCTGTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 90 bp TGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCAGCCCTCG +
Preference number: 1 (lower is better)
Translates to: CFIKTMQRSCSGCNG*ILKGNPCCWWNQPS
Trigger: CGAGGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR CCA 90 bp TTCCATGTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTaGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTGGACA +
Preference number: 1 (lower is better)
Translates to: FHVAWIFMAASEFPS*PLYLCPGRFISIWT
Trigger: TGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCACATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR GCA 90 bp GGGAAGATGTTTACAGCTTCAGGTGTGATAATTTTGAACCTGTCCTaGAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTGACGGCTGCA +
Preference number: 1 (lower is better)
Translates to: GKMFTASGVIILNLS*RSLLSSRFPDLTAA
Trigger: TGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAATTATCACACCTGAAGCTGTAAACATCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 90 bp TGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTGGACATaGGCTGGGTCCTCTAACACTGAGAGAAGGTCATATCTGGTAAGT +
Preference number: 1 (lower is better)
Translates to: WPLYLCPGRFISIWT*AGSSNTERRSYLVS
Trigger: ACTTACCAGATATGACCTTCTCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR TCA 90 bp AGGAGACAGAGGGTTTCATTTACTCTCAGGACACGATTGTGCCAGTaGACTAATGAGTCTCTTGGACCTTATGTTGCTCTGGCTTCAGTC +
Preference number: 1 (lower is better)
Translates to: RRQRVSFTLRTRLCQ*TNESLGPYVALASV
Trigger: GACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTGTCCTGAGAGTAAATGAAACCCTCTGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR CCA 90 bp GGCGATAAAAGAGGAAGAATTTTCTTGCTTTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCT +
Preference number: 1 (lower is better)
Translates to: GDKRGRIFLLCSISM*LGSSWRPPNFHLGP
Trigger: AGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCACATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCTTTTATCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR TCA 90 bp GTCTTAAAATTGGTCTCGCCTTGCATATTAGGTGCTGATATTTCTTaGTGGATGATGAAGAGATGGCGAGCAAAGGTCATGAGGACCCCC +
Preference number: 1 (lower is better)
Translates to: VLKLVSPCILGADIS*WMMKRWRAKVMRTP
Trigger: GGGGGTCCTCATGACCTTTGCTCGCCATCTCTTCATCATCCATCAAGAAATATCAGCACCTAATATGCAAGGCGAGACCAATTTTAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR GCA 90 bp ATGACATTCACATTGGCATCTAAGATGTCACACAGCCTCCCCAGCTaGATGTTCTGCTGTGTGTTGAAATCGGCAATATGTTCTCTCACA +
Preference number: 1 (lower is better)
Translates to: MTFTLASKMSHSLPS*MFCCVLKSAICSLT
Trigger: TGTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAGATGCCAATGTGAATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 90 bp GTATCTTCTTTAGTCGAGTCTTATGGCAATATAACAGCCAAGCAATaGCAATCACACCTGATGCCCACTTCTGCTGGCGATAAAAGAGGA +
Preference number: 1 (lower is better)
Translates to: VSSLVESYGNITAKQ*QSHLMPTSAGDKRG
Trigger: TCCTCTTTTATCGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATAAGACTCGACTAAAGAAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CCA 90 bp GCTGATAGATTTGCAGGCAAAAGTGTTATACCTAATGATGGGATATaGATAATAGTCCTCCTGGAGGTCCTGATGCGATTCCAGTTGGCT +
Preference number: 1 (lower is better)
Translates to: ADRFAGKSVIPNDGI*IIVLLEVLMRFQLA
Trigger: AGCCAACTGGAATCGCATCAGGACCTCCAGGAGGACTATTATCCATATCCCATCATTAGGTATAACACTTTTGCCTGCAAATCTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR TCA 90 bp AGCAATGGTGGTCTTAAAATTGGTCTCGCCTTGCATATTAGGTGCTaGTATTTCTTGATGGATGATGAAGAGATGGCGAGCAAAGGTCAT +
Preference number: 1 (lower is better)
Translates to: SNGGLKIGLALHIRC*YFLMDDEEMASKGH
Trigger: ATGACCTTTGCTCGCCATCTCTTCATCATCCATCAAGAAATATCAGCACCTAATATGCAAGGCGAGACCAATTTTAAGACCACCATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 90 bp AAACAAGGGGCCTTCCTTGAACTCAATCAAGGAGCCATAATGTGGTaGGTAATAGAGGTTGCTGATAGATTTGCAGGCAAAAGTGTTATA +
Preference number: 1 (lower is better)
Translates to: KQGAFLELNQGAIMW*VIEVADRFAGKSVI
Trigger: TATAACACTTTTGCCTGCAAATCTATCAGCAACCTCTATTACCCACCACATTATGGCTCCTTGATTGAGTTCAAGGAAGGCCCCTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR CCA 90 bp TCTGTAGATTTCTTAATGTGTTGTATTATAAAGTCTAACTGGAACTaGATGTCAGTGAGGGAACATGAACAGTACCAGGGATTTCTTCTT +
Preference number: 1 (lower is better)
Translates to: SVDFLMCCIIKSNWN*MSVREHEQYQGFLL
Trigger: AAGAAGAAATCCCTGGTACTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACATTAAGAAATCTACAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
3UTR-3UTR TCA 90 bp CGACTGGTTGCCAGCATCGGCATTGACAGCGCACTCATGCATTTGGTTTTCTTCGGATCCACTGAGGTCTaGGGCACGGTGGTACCAGAG +
Preference number: 2 (lower is better)
Translates to: RLVASIGIDSALMHLVFFGSTEV*GTVVPE
Trigger: CTCTGGTACCACCGTGCCTCAGACCTCAGTGGATCC...GAAGAAAACCAAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAACCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp CTCCTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGG +
Preference number: 2 (lower is better)
Translates to: LLEVLMRFQLAARCLARMCSISM*LGSSWR
Trigger: CCGCCATGAAGATCCAAGCCACATGGAAATGCTACA...CATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CAA 90 bp AGAAATGTTTGGAGGAATTTCCTCCACGTCGGGAACCGTTTCTCATaGACTGGCTGTGCGTGCTGTGCTAAAATGCCCGCCAGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: RNVWRNFLHVGNRFS*TGCACCAKMPASSS
Trigger: TGAGGAGCTGGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAATGAGAAACGGTTCCCGACGTGGAGGAAATTCCTCCAAACATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 90 bp GGACACGATTGTGCCAGTGAACTAATGAGTCTCTTGGACCTTATGTaGCTCTGGCTTCAGTCGAGGCGCGGCTCTAATGGGCATGTAGGA +
Preference number: 2 (lower is better)
Translates to: GHDCASELMSLLDLM*LWLQSRRGSNGHVG
Trigger: TCCTACATGCCCATTAGAGCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR-3UTR TCA 90 bp TCTTGGACCTTATGTTGCTCTGGCTTCAGTCGAGGCGCGGCTCTAATGGGCATGTATCTGTCAAGTGTCTaGACAATGGGCCCCTCGAAT +
Preference number: 2 (lower is better)
Translates to: SWTLCCSGFSRGAALMGMYLSSV*TMGPSN
Trigger: ATTCGAGGGGCCCATTGTTCAGACACTTGACAGATA...CATGCCCATTAGAGCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR-3UTR CCA 90 bp AACCTGTCCTGCAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTGACGGCTGCAGGTAATCCTTGCTGTTaGTGGAATCAGCCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: NLSCRSLLSSRFPDLTAAGNPCC*WNQPSF
Trigger: GAACGAGGGCTGATTCCACCAACAGCAAGGATTACC...TGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 90 bp GATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTaGCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: DLHGGLRISILALVP*PWKIYQHLDMSWVL
Trigger: GAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR TCA 90 bp CCTCCTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGTAATGGGTGGATTCTaGAAGGTAATCCTTGCTGTT +
Preference number: 2 (lower is better)
Translates to: PPGGPDAIPVGCQMLGSNVMGGF*KVILAV
Trigger: AACAGCAAGGATTACCTTTCAGAATCCACCCATTAC...ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp CCTCCTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGAAAGTGGCTACAGTTaGAATCTTACGTGCTTCATC +
Preference number: 2 (lower is better)
Translates to: PPGGPDAIPVGCQMLGSNESGYS*NLTCFI
Trigger: GATGAAGCACGTAAGATTCCAACTGTAGCCACTTTC...ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp CCTCCCCAGCTGCATGTTCTGCTGTGTGTTGAAATCGGCAATATGTTCTCTCACCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 2 (lower is better)
Translates to: PPQLHVLLCVEIGNMFSHHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...GTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp GCCAGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTTCCGACCTTATGTTGCTCTaGCTTCAGTCGAGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: ASSLSFGSANQNSHAKLSDLMLL*LQSRRG
Trigger: GCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTC...GGAAAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR CAA 90 bp TTTCCATGTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTGGAC +
Preference number: 2 (lower is better)
Translates to: FPCGLDLHGGLRISI*ALVPLPWKIYQHLD
Trigger: GTCCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCACATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CAA 90 bp CATTTACTCTCAGGACACGATTGTGCCAGTGAACTAATGAGTCTCTaGGACCTTATGTTGCTCTGGCTTCAGTCGAGGCGCGGCTCTAAT +
Preference number: 2 (lower is better)
Translates to: HLLSGHDCASELMSL*DLMLLWLQSRRGSN
Trigger: ATTAGAGCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTGTCCTGAGAGTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR-3UTR GCA 90 bp TATGGCAATATAACAGCCAAGCAATGGCAATCACACCTGATGCCCACTTCTGCTACTATGCAGAGGAGCTaGTCTGGGTGTAATGGGTGG +
Preference number: 2 (lower is better)
Translates to: YGNITAKQWQSHLMPTSATMQRS*SGCNGW
Trigger: CCACCCATTACACCCAGAGCAGCTCCTCTGCATAGT...AGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp AAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGGTAATCCTTGCTGTTaGTGGAATCAGCCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: KNFTSAGDGGGSRGIVKVGNPCC*WNQPSF
Trigger: GAACGAGGGCTGATTCCACCAACAGCAAGGATTACC...CACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp GCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGATGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 2 (lower is better)
Translates to: ALEDLSAFGHELGPLTLRCWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...TCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp TTAGCTGGGTGGTCATCACTGCATAGCGACTGGTTGCCAGCATCGGCATTGACAAAACTGCAATCCAGATaGCCGTTTGTCAGGTATAAG +
Preference number: 2 (lower is better)
Translates to: LAGWSSLHSDWLPASALTKLQSR*PFVRYK
Trigger: CTTATACCTGACAAACGGCCATCTGGATTGCAGTTT...TGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGATGACCACCCAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 90 bp TCTAAGATGTCACACAGCCTCCCCAGCTGCATGTTCTGCTGTGTGTaGAAATCGGCAATATGTTCTCTCACAGGCTGGGAATACCCTAAT +
Preference number: 2 (lower is better)
Translates to: SKMSHSLPSCMFCCV*KSAICSLTGWEYPN
Trigger: ATTAGGGTATTCCCAGCCTGTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR TCA 90 bp CGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: RGSCVITLIMSRTFSCRDVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...GTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR TCA 90 bp CTCAACATCATAGCCAATGCCATGGGCCCTACAGATCTGGAGAAAAACATAGTGTTGTCAGGTATAAGGTaGGTTGAGTCAGGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: LNIIANAMGPTDLEKNIVLSGIR*VESGPA
Trigger: AGCTGGCCCTGACTCAACTCACCTTATACCTGACAA...CACTATGTTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR GCA 90 bp GCCAGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTTCCTCTTGGACCTTATGTTaGTCTGGCTTCAGTCGAGGC +
Preference number: 2 (lower is better)
Translates to: ASSLSFGSANQNSHAKLSSWTLC*SGFSRG
Trigger: GCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGA...GGAAAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR-3UTR CCA 90 bp AGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCGGTAATCCTTGCTGTTaGTGGAATCAGCCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: SGYSWNLTCFIKTMQRSCGNPCC*WNQPSF
Trigger: GAACGAGGGCTGATTCCACCAACAGCAAGGATTACC...GCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp TCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAATTAGAACTAAACACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 2 (lower is better)
Translates to: SGALGANKASHLLVIRTKHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...TTTAGTTCTAATTACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR CCA 90 bp TCCCACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATGAACTTCACTTCTGCTaGAGATGGAGGTGGTTCCCG +
Preference number: 2 (lower is better)
Translates to: SHSDFRALKGVLTFMAFDELHFC*RWRWFP
Trigger: CGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTC...ATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
3UTR-3UTR TCA 90 bp TTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGGTAATGGGTGGATTCTaGAAGGTAATCCTTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LFLGKELHFCWRWRWFPRVMGGF*KVILAV
Trigger: AACAGCAAGGATTACCTTTCAGAATCCACCCATTAC...CCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR-3UTR TCA 90 bp GCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGAATCATGATGTCCTCTTaGCCTTCTGCTTTTCCCCTT +
Preference number: 2 (lower is better)
Translates to: ALEDLSAFGHELGPLTLRIMMSS*PSAFPL
Trigger: AAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGAT...TCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
3UTR-3UTR TCA 90 bp CTCAACATCATAGCCAATGCCATGGGCCCTACAGATCTGGAGAAAAACATAGTGGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: LNIIANAMGPTDLEKNIVVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...CACTATGTTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR TCA 90 bp AAGGTCATATCTGGTAAGTTTATTCGTCAGCTCAAACTCTGGAAGGAGGGCCACGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: KVISGKFIRQLKLWKEGHVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...GTGGCCCTCCTTCCAGAGTTTGAGCTGACGAATAAACTTACCAGATATGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
3UTR-3UTR TCA 90 bp CTCAGCTGCTCTATCATAGGGAAGATGTTTACAGCTTCAGGTGTGATAATTTTGAATGGCAATCACACCTaGTGCCCACTTCTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: LSCSIIGKMFTASGVIILNGNHT*CPLLLA
Trigger: CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATT...CAAAATTATCACACCTGAAGCTGTAAACATCTTCCCTATGATAGAGCAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR GCA 90 bp TTTGCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGGCTTCATCAAAACTATaGAGAGGAGCTGCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: FALEDLSAFGHELGPLTLASSKL*RGAALG
Trigger: ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGC...CAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp CCTCCCCAGCTGCATGTTCTGCTGTGTGTTGAAATCGGCAATATGTTCTCTCACTCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCT +
Preference number: 2 (lower is better)
Translates to: PPQLHVLLCVEIGNMFSHSGCNG*ILKGNP
Trigger: AGGATTACCTTTCAGAATCCACCCATTACACCCAGA...GTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp TCCCACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATTGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 2 (lower is better)
Translates to: SHSDFRALKGVLTFMAFDCWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...ATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
3UTR-3UTR CCA 90 bp CCGAATTTCCATCTTGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTTGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 2 (lower is better)
Translates to: PNFHLGPCTFALEDLSAFCWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...AAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR TCA 90 bp GATTGTTCTCAACATCATAGCCAATGCCATGGGCCCTACAGATCTGGAGAAAAACAAGGTTCCCAGATTTaGCGGCTGCATGTAGACTTA +
Preference number: 2 (lower is better)
Translates to: DCSQHHSQCHGPYRSGEKQGSQI*RLHVDL
Trigger: TAAGTCTACATGCAGCCGTCAAATCTGGGAACCTTG...TTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAGAACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR TCA 90 bp GACTTCTGGTATAGCATAGTTCCTGAGAAACTTCTCGACGTGTTCCAAGAGAGAATGGCCTTCCTATCATaGTGTCCTCTTGACCTTCTG +
Preference number: 2 (lower is better)
Translates to: DFWYSIVPEKLLDVFQERMAFLS*CPLDLL
Trigger: CAGAAGGTCAAGAGGACATCATGATAGGAAGGCCAT...TCTCTCTTGGAACACGTCGAGAAGTTTCTCAGGAACTATGCTATACCAGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
3UTR-3UTR TCA 90 bp GCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGACTCTCAAAGGTGTTTTaGCTTTCATGGCCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: ALEDLSAFGHELGPLTLRLSKVF*LSWPSY
Trigger: ATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAG...TCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
3UTR-3UTR GCA 90 bp TGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTTTCATCTTTGGACTGTTaGTCCTCTTCAAATCTCATT +
Preference number: 2 (lower is better)
Translates to: WLGSSWRPPNFHLGPCTFSSLDC*SSSNLI
Trigger: AATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGA...AAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp CTGGTCACTATATGCGAGGTTAAGGCCGGTTGCCCACACCTGTTGTTCCAAGGTCAAACCAATTTCCCCTaGCTTTTATTTCTAACAGAA +
Preference number: 2 (lower is better)
Translates to: LVTICEVKAGCPHLLFQGQTNFP*LLFLTE
Trigger: TTCTGTTAGAAATAAAAGCCAGGGGAAATTGGTTTG...ACCTTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTCGCATATAGTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp GGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATGAATCCTTGCTGTTGGTaGAATCAGCCCTCGTTCTAT +
Preference number: 2 (lower is better)
Translates to: GILRASSKLCRGAALGVMNPCCW*NQPSFY
Trigger: ATAGAACGAGGGCTGATTCCACCAACAGCAAGGATT...CATTACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp AGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATCCTTGCTGTTGGTaGAATCAGCCCTCGTTCTAT +
Preference number: 2 (lower is better)
Translates to: SWNLTCFIKTMQRSCSGCNPCCW*NQPSFY
Trigger: ATAGAACGAGGGCTGATTCCACCAACAGCAAGGATT...ACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR-3UTR CCA 90 bp TGTAGCACTTTAGGTAGGAAGGAATATCACAAAATGCAGTCCCATTTCCTCGGACGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATT +
Preference number: 2 (lower is better)
Translates to: CSTLGRKEYHKMQSHFLGRQLKL*KEGHQI
Trigger: AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACG...TCCGAGGAAATGGGACTGCATTTTGTGATATTCCTTCCTACCTAAAGTGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp CTCGAATGCGAAAATTCTCCAGGTGTCTCTGACGTGATTCCTTTAGTATCTTCTTGGCTTGGATCTTCATaGCGGCCTCCGAATTTCCAT +
Preference number: 2 (lower is better)
Translates to: LECENSPGVSDVIPLVSSWLGSS*RPPNFH
Trigger: ATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA...AGAAGATACTAAAGGAATCACGTCAGAGACACCTGGAGAATTTTCGCATTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CAA 90 bp TGCTCTATCATAGGGAAGATGTTTACAGCTTCAGGTGTGATAATTTaGAACCTGTCCTGCAGGTCACTTCTGTCCTCAAGGTTCCCAGAT +
Preference number: 2 (lower is better)
Translates to: CSIIGKMFTASGVII*NLSCRSLLSSRFPD
Trigger: ATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAATTATCACACCTGAAGCTGTAAACATCTTCCCTATGATAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 90 bp ATTTCCTCGGAACTCAGAGTCCATTTTAAAGAGCCAACGCTGTATTaGCAGGTGATCAGTTATCAGCTGACTCAGCTGCTCTATCATAGG +
Preference number: 2 (lower is better)
Translates to: ISSELRVHFKEPTLY*QVISYQLTQLLYHR
Trigger: CCTATGATAGAGCAGCTGAGTCAGCTGATAACTGATCACCTGCAAATACAGCGTTGGCTCTTTAAAATGGACTCTGAGTTCCGAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR TCA 90 bp ACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATGGGTGGATTCTaGAAGGTAATCCTTGCTGTT +
Preference number: 2 (lower is better)
Translates to: TVGILRASSKLCRGAALGVMGGF*KVILAV
Trigger: AACAGCAAGGATTACCTTTCAGAATCCACCCATTAC...ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR-3UTR TCA 90 bp AGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCACTCTCAAAGGTGTTTTaGCTTTCATGGCCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: RVLCYYSHHVENIFLPRPLSKVF*LSWPSY
Trigger: ATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAG...TGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAATAACAGCCAAGCAATaGCAATCACACCTGATGCCC +
Preference number: 2 (lower is better)
Translates to: LPPRYILMLWLTRCWLILITAKQ*QSHLMP
Trigger: GGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTAT...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp CACGATTGTGCCAGTGAACTAATGAGTCTCTTGGACCTTATGTTGCTCTGGCTTAATGGGCCCCTCGAATaGATTAGAGAGATTGTATTC +
Preference number: 2 (lower is better)
Translates to: HDCASELMSLLDLMLLWLNGPLE*IREIVF
Trigger: GAATACAATCTCTCTAATCCATTCGAGGGGCCCATT...AAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR-3UTR TCA 90 bp AGCACTTTAGGTAGGAAGGAATATCACAAAATGCAGTCCCATTTCCTCGGAACTTTCTCCAGGTGTCTCTaGCGTGATTCCTTTAGTATC +
Preference number: 2 (lower is better)
Translates to: STLGRKEYHKMQSHFLGTFSRCL*RDSFSI
Trigger: GATACTAAAGGAATCACGTCAGAGACACCTGGAGAA...AGTTCCGAGGAAATGGGACTGCATTTTGTGATATTCCTTCCTACCTAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR GCA 90 bp AAACAGTGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACGCTTCATCAAAACTATaGAGAGGAGCTGCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: KQCTSNILAYWRNSNNTYASSKL*RGAALG
Trigger: ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGC...GTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR TCA 90 bp GTAGAACCAAAGAACTGGTATAATTCTACAGCAACTCACATCTTGCCAAAAAGAGGAACTGGATGTCAGTaGGGGAACATGAACAGTACC +
Preference number: 2 (lower is better)
Translates to: VEPKNWYNSTATHILPKRGTGCQ*GNMNST
Trigger: GGTACTGTTCATGTTCCCTCACTGACATCCAGTTCC...TCTTTTTGGCAAGATGTGAGTTGCTGTAGAATTATACCAGTTCTTTGGTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512104.5
3UTR-3UTR CCA 90 bp CACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTTCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCT +
Preference number: 2 (lower is better)
Translates to: HSDFRALKGVLTFMAFDLSGCNG*ILKGNP
Trigger: AGGATTACCTTTCAGAATCCACCCATTACACCCAGA...AAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
3UTR-3UTR CCA 90 bp CACAAATCTTCCTATCATGATGTCCTCTTGACCTTCTGCTTTTCCCCTTTGATCGAAAGTGGCTACAGTTaGAATCTTACGTGCTTCATC +
Preference number: 2 (lower is better)
Translates to: HKSSYHDVLLTFCFSPLIESGYS*NLTCFI
Trigger: GATGAAGCACGTAAGATTCCAACTGTAGCCACTTTC...GATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGATTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTAGGAGCCATAATGTGGTaGGTAATAGAGGTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLGAIMW*VIEVAD
Trigger: ATCAGCAACCTCTATTACCCACCACATTATGGCTCC...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR CCA 90 bp TCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAATTAGAACTAAATTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: SGALGANKASHLLVIRTKFSRVL*QYNSQA
Trigger: TGCTTGGCTGTTATATTGCCATAAGACTCGACTAAA...TTTAGTTCTAATTACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR CCA 90 bp CTCAGCTGCTCTATCATAGGGAAGATGTTTACAGCTTCAGGTGTGATAATTTTGCCTAATGATGGGATATaGATAATAGTCCTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: LSCSIIGKMFTASGVIILPNDGI*IIVLLE
Trigger: CTCCAGGAGGACTATTATCCATATCCCATCATTAGG...CAAAATTATCACACCTGAAGCTGTAAACATCTTCCCTATGATAGAGCAGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTGGCCCTTGTACCTTTaGCCTGGAAGATTTATCAGC +
Preference number: 2 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLWPLYL*PGRFIS
Trigger: GCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACTTTGGTTAACTAGATaGTGGCTTATCCTACTTTTT +
Preference number: 2 (lower is better)
Translates to: LPPRYILMLWLTRCWLILLWLTR*WLILLF
Trigger: AAAAAGTAGGATAAGCCAGCATCTAGTTAACCAAAG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACAAACCAATTTCCCCTaGCTTTTATTTCTAACAGAA +
Preference number: 2 (lower is better)
Translates to: LPPRYILMLWLTRCWLILQTNFP*LLFLTE
Trigger: TTCTGTTAGAAATAAAAGCCAGGGGAAATTGGTTTG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCAAATCTTCCTATCATaGTGTCCTCTTGACCTTCTG +
Preference number: 2 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNQIFLS*CPLDLL
Trigger: CAGAAGGTCAAGAGGACATCATGATAGGAAGATTTG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCTTTGGTTAACTAGATaGTGGCTTATCCTACTTTTT +
Preference number: 2 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSLWLTR*WLILLF
Trigger: AAAAAGTAGGATAAGCCAGCATCTAGTTAACCAAAG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAATGCAGAAGATCGATaGACTATTAGAAATAGGAGA +
Preference number: 2 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSNAEDR*TIRNRR
Trigger: TCTCCTATTTCTAATAGTCCATCGATCTTCTGCATT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACAGACAATAGTGGCTTaGTATAACAAAAACACGATG +
Preference number: 2 (lower is better)
Translates to: TNVYSSYRARATLHLKLRQTIVA*YNKNTM
Trigger: CATCGTGTTTTTGTTATACCAAGCCACTATTGTCTG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CCA 90 bp GTAGAACCAAAGAACTGGTATAATTCTACAGCAACTCACATCTTGCCAAAAAGAATTATAAAGTCTAACTaGAACTGGATGTCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: VEPKNWYNSTATHILPKRIIKSN*NWMSVR
Trigger: CCTCACTGACATCCAGTTCCAGTTAGACTTTATAAT...TCTTTTTGGCAAGATGTGAGTTGCTGTAGAATTATACCAGTTCTTTGGTTCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512104.5
3UTR-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTCATCTTTGGACTGTTaGTCCTCTTCAAATCTCATT +
Preference number: 2 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLSSLDC*SSSNLI
Trigger: AATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
3UTR-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCAAACCAATTTCCCCTaGCTTTTATTTCTAACAGAA +
Preference number: 2 (lower is better)
Translates to: RIQMFIQATELELHSILNQTNFP*LLFLTE
Trigger: TTCTGTTAGAAATAAAAGCCAGGGGAAATTGGTTTG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGCTTTGGTTAACTAGATaGTGGCTTATCCTACTTTTT +
Preference number: 2 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLLWLTR*WLILLF
Trigger: AAAAAGTAGGATAAGCCAGCATCTAGTTAACCAAAG...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCAAACCAATTTCCCCTaGCTTTTATTTCTAACAGAA +
Preference number: 2 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNQTNFP*LLFLTE
Trigger: TTCTGTTAGAAATAAAAGCCAGGGGAAATTGGTTTG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR TCA 72 bp CCACTGAGGTCTGAGGCACGGTGGTACCAGAGGAGATaGAGGGGCTTTCAGCATGAAGCTGGTCCCCTGTCG +
Preference number: 3 (lower is better)
Translates to: PLRSEARWYQRR*RGFQHEAGPLS
Trigger: CGACAGGGGACCAGCTTCATGCTGAAAGCCCCTTCATCTCCTCTGGTACCACCGTGCCTCAGACCTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR GCA 72 bp CACGTCGGGAACCGTTTCTCATTGACTGGCTGTGCGTaGTGTGCTAAAATGCCCGCCAGCTCCTCAGAGATC +
Preference number: 3 (lower is better)
Translates to: HVGNRFSLTGCA*CAKMPASSSEI
Trigger: GATCTCTGAGGAGCTGGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAATGAGAAACGGTTCCCGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CAA 90 bp CTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGACTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: LEVLMRFQLAARCLARMRLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...TCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CCA 72 bp TGTGTCTTAGCTGGGTGGTCATCACTGCATAGCGACTaGTTGCCAGCATCGGCATTGACAGCGCACTCATGC +
Preference number: 3 (lower is better)
Translates to: CVLAGWSSLHSD*LPASALTAHSC
Trigger: GCATGAGTGCGCTGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGATGACCACCCAGCTAAGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 72 bp TTTCAGCATGAAGCTGGTCCCCTGTCGACAGCACGCTaGTTTTCCCGTTGGGCTCTATCAGCATGTCCACTG +
Preference number: 3 (lower is better)
Translates to: FQHEAGPLSTAR*FSRWALSACPL
Trigger: CAGTGGACATGCTGATAGAGCCCAACGGGAAAATCAGCGTGCTGTCGACAGGGGACCAGCTTCATGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CAA 90 bp GAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAACTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: EVLMRFQLAARCLARMRKLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...TTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR GCA 72 bp TCCTTTCCTTTGGAACAAAGCGGGGCACTTCCAGGGTaGTCAAACTGCAATCCAGATGGCCGTTTGTCAGGT +
Preference number: 3 (lower is better)
Translates to: SFPLEQSGALPG*SNCNPDGRLSG
Trigger: ACCTGACAAACGGCCATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCCGCTTTGTTCCAAAGGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 72 bp ATGAAGAGATGGCGAGCAAAGGTCATGAGGACCCCCTaGAGATCCTCGCCGATTGTTCTCAACATCATAGCC +
Preference number: 3 (lower is better)
Translates to: MKRWRAKVMRTP*RSSPIVLNIIA
Trigger: GGCTATGATGTTGAGAACAATCGGCGAGGATCTCCAGGGGGTCCTCATGACCTTTGCTCGCCATCTCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 72 bp CACACAGCCTCCCCAGCTGCATGTTCTGCTGTGTGTTaGAATCGGCAATATGTTCTCTCACAGGCTGGGAAT +
Preference number: 3 (lower is better)
Translates to: HTASPAACSAVC*NRQYVLSQAGN
Trigger: ATTCCCAGCCTGTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 72 bp CAATCCAGATGGCCGTTTGTCAGGTATAAGGTGAGTTaGGTCAGGGCCAGCTGGTCACTATATGCGAGGTTA +
Preference number: 3 (lower is better)
Translates to: QSRWPFVRYKVS*VRASWSLYARL
Trigger: TAACCTCGCATATAGTGACCAGCTGGCCCTGACTCAACTCACCTTATACCTGACAAACGGCCATCTGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 72 bp AACTGCAATCCAGATGGCCGTTTGTCAGGTATAAGGTaGGTTGAGTCAGGGCCAGCTGGTCACTATATGCGA +
Preference number: 3 (lower is better)
Translates to: NCNPDGRLSGIR*VESGPAGHYMR
Trigger: TCGCATATAGTGACCAGCTGGCCCTGACTCAACTCACCTTATACCTGACAAACGGCCATCTGGATTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR GCA 72 bp CACTGTGAGGTTGGTGACATTGTCTGCAGGTGGGAATaGTTCGATCACACCCCCTTGACTGAGAAATGTTTG +
Preference number: 3 (lower is better)
Translates to: HCEVGDIVCRWE*FDHTPLTEKCL
Trigger: CAAACATTTCTCAGTCAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGACAATGTCACCAACCTCACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 72 bp TTGCTTTGTAGCATTTCCATGTGGCTTGGATCTTCATaGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACC +
Preference number: 3 (lower is better)
Translates to: LLCSISMWLGSS*RPPNFHLGPCT
Trigger: GGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCACATGGAAATGCTACAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CCA 72 bp AGTGAACTAATGAGTCTCTTGGACCTTATGTTGCTCTaGCTTCAGTCGAGGCGCGGCTCTAATGGGCATGTA +
Preference number: 3 (lower is better)
Translates to: SELMSLLDLMLL*LQSRRGSNGHV
Trigger: TACATGCCCATTAGAGCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR-3UTR CAA 90 bp ATTGTCTGCAGGTGGGAATGCTTCGATCACACCCCCTTGACTGAGAAATGTTTGTTGGCTGCCAGATGCTaGGCTCGAATGCGAAAATTC +
Preference number: 3 (lower is better)
Translates to: IVCRWECFDHTPLTEKCLLAARC*ARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAA...CAAACATTTCTCAGTCAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 72 bp GGGGCCTTCCTTGAACTCAATCAAGGAGCCATAATGTaGTGGGTAATAGAGGTTGCTGATAGATTTGCAGGC +
Preference number: 3 (lower is better)
Translates to: GAFLELNQGAIM*WVIEVADRFAG
Trigger: GCCTGCAAATCTATCAGCAACCTCTATTACCCACCACATTATGGCTCCTTGATTGAGTTCAAGGAAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGGGAACCGTTTCTCATaGACTGGCTGTGCGTGCTGT +
Preference number: 3 (lower is better)
Translates to: LPPRYILMLWLTRCWLILGNRFS*TGCACC
Trigger: ACAGCACGCACAGCCAGTCAATGAGAAACGGTTCCC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CAA 90 bp CTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: LGKELHFCWRWRWFPRYSALKGV*TFMAFL
Trigger: TAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...ACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR CAA 90 bp TTCCTTTGGAACAAAGCGGGGCACTTCCAGGGTGCTCAAACTGCAATCCAGATGATGTTCTGCTGTGTGTaGAAATCGGCAATATGTTCT +
Preference number: 3 (lower is better)
Translates to: FLWNKAGHFQGAQTAIQMMFCCV*KSAICS
Trigger: AGAACATATTGCCGATTTCAACACACAGCAGAACAT...CATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCCGCTTTGTTCCAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR GCA 72 bp ACATTGGCATCTAAGATGTCACACAGCCTCCCCAGCTaGATGTTCTGCTGTGTGTTGAAATCGGCAATATGT +
Preference number: 3 (lower is better)
Translates to: TLASKMSHSLPS*MFCCVLKSAIC
Trigger: ACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAGATGCCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR GCA 72 bp GAGATCCTCGCCGATTGTTCTCAACATCATAGCCAATaGCATGGGCCCTACAGATCTGGAGAAAAACATAGT +
Preference number: 3 (lower is better)
Translates to: EILADCSQHHSQ*HGPYRSGEKHS
Trigger: ACTATGTTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAGAACAATCGGCGAGGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 72 bp TTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTAC +
Preference number: 3 (lower is better)
Translates to: LFLGKELHFCWR*RWFPRYSESGY
Trigger: GTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
3UTR CCA 72 bp TTAGTCGAGTCTTATGGCAATATAACAGCCAAGCAATaGCAATCACACCTGATGCCCACTTCTGCTGGCGAT +
Preference number: 3 (lower is better)
Translates to: LVESYGNITAKQ*QSHLMPTSAGD
Trigger: ATCGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATAAGACTCGACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAAAAACCAGTGAGAGATaGCTGTGTCTTAGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: LPPRYILMLWLTRCWLILKTSER*LCLSWV
Trigger: CACCCAGCTAAGACACAGCAATCTCTCACTGGTTTT...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 72 bp TTGGTCTCGCCTTGCATATTAGGTGCTGATATTTCTTaGTGGATGATGAAGAGATGGCGAGCAAAGGTCATG +
Preference number: 3 (lower is better)
Translates to: LVSPCILGADIS*WMMKRWRAKVM
Trigger: CATGACCTTTGCTCGCCATCTCTTCATCATCCATCAAGAAATATCAGCACCTAATATGCAAGGCGAGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR TCA 72 bp AGGGTTTCATTTACTCTCAGGACACGATTGTGCCAGTaGACTAATGAGTCTCTTGGACCTTATGTTGCTCTG +
Preference number: 3 (lower is better)
Translates to: RVSFTLRTRLCQ*TNESLGPYVAL
Trigger: CAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTGTCCTGAGAGTAAATGAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR TCA 72 bp GCCGAGACCAATTTGAATAAAACAAGGGGCCTTCCTTaGACTCAATCAAGGAGCCATAATGTGGTGGGTAAT +
Preference number: 3 (lower is better)
Translates to: AETNLNKTRGLP*TQSRSHNVVGN
Trigger: ATTACCCACCACATTATGGCTCCTTGATTGAGTTCAAGGAAGGCCCCTTGTTTTATTCAAATTGGTCTCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR GCA 72 bp TTTACAGCTTCAGGTGTGATAATTTTGAACCTGTCCTaGAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTG +
Preference number: 3 (lower is better)
Translates to: FTASGVIILNLS*RSLLSSRFPDL
Trigger: CAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAATTATCACACCTGAAGCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 72 bp GCCTTCCTTGAACTCAATCAAGGAGCCATAATGTGGTaGGTAATAGAGGTTGCTGATAGATTTGCAGGCAAA +
Preference number: 3 (lower is better)
Translates to: AFLELNQGAIMW*VIEVADRFAGK
Trigger: TTTGCCTGCAAATCTATCAGCAACCTCTATTACCCACCACATTATGGCTCCTTGATTGAGTTCAAGGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR-3UTR CAA 90 bp TATGGCAATATAACAGCCAAGCAATGGCAATCACACCTGATGCCCACTTCTGCTAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: YGNITAKQWQSHLMPTSAKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...AGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR TCA 72 bp GGTCTTAAAATTGGTCTCGCCTTGCATATTAGGTGCTaGTATTTCTTGATGGATGATGAAGAGATGGCGAGC +
Preference number: 3 (lower is better)
Translates to: GLKIGLALHIRC*YFLMDDEEMAS
Trigger: GCTCGCCATCTCTTCATCATCCATCAAGAAATATCAGCACCTAATATGCAAGGCGAGACCAATTTTAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR-3UTR CAA 90 bp CTCAGCTGCTCTATCATAGGGAAGATGTTTACAGCTTCAGGTGTGATAATTTTGAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: LSCSIIGKMFTASGVIILKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...CAAAATTATCACACCTGAAGCTGTAAACATCTTCCCTATGATAGAGCAGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CCA 72 bp CGTGATTCCTTTAGTATCTTCTTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCAATGGCAATCACACCT +
Preference number: 3 (lower is better)
Translates to: RDSFSIFFSRVL*QYNSQAMAITP
Trigger: AGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATAAGACTCGACTAAAGAAGATACTAAAGGAATCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR-3UTR CAA 90 bp GTAGAACCAAAGAACTGGTATAATTCTACAGCAACTCACATCTTGCCAAAAAGAACCAGGGATTTCTTCTaGTTTCCACATACCTTTGAG +
Preference number: 3 (lower is better)
Translates to: VEPKNWYNSTATHILPKRTRDFF*FPHTFE
Trigger: CTCAAAGGTATGTGGAAACAAGAAGAAATCCCTGGT...TCTTTTTGGCAAGATGTGAGTTGCTGTAGAATTATACCAGTTCTTTGGTTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512104.5
3UTR CCA 72 bp GTCATATCTGGTAAGTTTATTCGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATTATTCCCTTTTATTTT +
Preference number: 3 (lower is better)
Translates to: VISGKFIRQLKL*KEGHQIIPFYF
Trigger: AAAATAAAAGGGAATAATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACGAATAAACTTACCAGATATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
3UTR-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAATCATCTTTGGACTGTaGCTCCTCTTCAAATCTCAT +
Preference number: 3 (lower is better)
Translates to: TNVYSSYRARATLHLKLRIIFGL*LLFKSH
Trigger: ATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGAT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
3UTR GCA 72 bp CCACCTAGATACATTCTGATGCTTTGGTTAACTAGATaGTGGCTTATCCTACTTTTTGAAAAATGGCAACAA +
Preference number: 3 (lower is better)
Translates to: PPRYILMLWLTR*WLILLFEKWQQ
Trigger: TTGTTGCCATTTTTCAAAAAGTAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGAGACTGGGATCCAAATaGTTATGTACTGTATTCCAG +
Preference number: 3 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLRLGSK*LCTVFQ
Trigger: CTGGAATACAGTACATAACAATTTGGATCCCAGTCT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATAGACTGGGATCCAAATaGTTATGTACTGTATTCCAG +
Preference number: 3 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNRLGSK*LCTVFQ
Trigger: CTGGAATACAGTACATAACAATTTGGATCCCAGTCT...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTAGACTGGGATCCAAATaGTTATGTACTGTATTCCAG +
Preference number: 3 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIRLGSK*LCTVFQ
Trigger: CTGGAATACAGTACATAACAATTTGGATCCCAGTCT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
3UTR CAA 72 bp AGCTGGTCCCCTGTCGACAGCACGCTGATTTTCCCGTaGGGCTCTATCAGCATGTCCACTGTGAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SWSPVDSTLIFP*GSISMSTVRLV
Trigger: CACCAACCTCACAGTGGACATGCTGATAGAGCCCAACGGGAAAATCAGCGTGCTGTCGACAGGGGACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTAAGGGGCTTTCAGCATaGAGCTGGTCCCCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: VAWIFMAASEFPSWPLYLKGLSA*SWSPVD
Trigger: GTCGACAGGGGACCAGCTTCATGCTGAAAGCCCCTT...AAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 72 bp TGGAGGAATTTCCTCCACGTCGGGAACCGTTTCTCATaGACTGGCTGTGCGTGCTGTGCTAAAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: WRNFLHVGNRFS*TGCACCAKMPA
Trigger: GGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAATGAGAAACGGTTCCCGACGTGGAGGAAATTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp GAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAACGTGCTGTGCTAAAATaGCCGCCAGCTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EVLMRFQLAARCLARMRKRAVLK*PPAPQR
Trigger: TCTCTGAGGAGCTGGCGGGCATTTTAGCACAGCACG...TTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp GTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTTTGACTGGCTGTGCGTaGTGTGCTAAAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VAWIFMAASEFPSWPLYLLTGCA*CAKMPA
Trigger: GGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAA...AAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGGTCACTATATGCGAGGTTAAGGCCGGTTGCCCACACCTGTTGTTCCAAGGTCTGGGTGGTCATCACTaGATAGCGACTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVTICEVKAGCPHLLFQGLGGHH*IATGCQ
Trigger: CTGGCAACCAGTCGCTATGCAGTGATGACCACCCAG...ACCTTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTCGCATATAGTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp GAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAACAGTGTTCTGTGCCATaGCTAGGTCAGGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: EVLMRFQLAARCLARMRKQCSVP*LGQGTA
Trigger: AGCCGTTCCCTGACCTAGCCATGGCACAGAACACTG...TTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp CCTCCTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATTGGCTTGGATCTTCATaGCGGCCTCCGAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: PPGGPDAIPVGCQMLGSNWLGSS*RPPNFH
Trigger: ATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA...ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CAA 72 bp GGCTCTATCAGCATGTCCACTGTGAGGTTGGTGACATaGTCTGCAGGTGGGAATGCTTCGATCACACCCCCT +
Preference number: 4 (lower is better)
Translates to: GSISMSTVRLVT*SAGGNASITPP
Trigger: AGGGGGTGTGATCGAAGCATTCCCACCTGCAGACAATGTCACCAACCTCACAGTGGACATGCTGATAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp CTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGACTGCCGAGACCAATTTaGATAAAACAAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LEVLMRFQLAARCLARMRLPRPI*IKQGAF
Trigger: GAAGGCCCCTTGTTTTATTCAAATTGGTCTCGGCAG...TCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR GCA 90 bp AACCTGTCCTGCAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTGACGGCTGCAACTATGCAGAGGAGCTaGTCTGGGTGTAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: NLSCRSLLSSRFPDLTAATMQRS*SGCNGW
Trigger: CCACCCATTACACCCAGAGCAGCTCCTCTGCATAGT...TGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp CCTCCTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCTTCATCAAAACTATaGAGAGGAGCTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PPGGPDAIPVGCQMLGSNASSKL*RGAALG
Trigger: ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGC...ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR GCA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCGTCTGCAGGTGGGAATaGTTCGATCACACCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIVCRWE*FDHTPL
Trigger: CAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGAC...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp TTAGCTGGGTGGTCATCACTGCATAGCGACTGGTTGCCAGCATCGGCATTGACAGAGGTTAAGGCCGGTTaGCCACACCTGTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LAGWSSLHSDWLPASALTEVKAG*PHLLFQ
Trigger: TTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTC...TGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGATGACCACCCAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp TTAGCTGGGTGGTCATCACTGCATAGCGACTGGTTGCCAGCATCGGCATTGACACCAGGGTGCTCAAACTaGAATCCAGATGGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: LAGWSSLHSDWLPASALTPGCSN*NPDGRL
Trigger: CAAACGGCCATCTGGATTGCAGTTTGAGCACCCTGG...TGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGATGACCACCCAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp GTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTCACAGCATTTCCTTTTaGTCAGGCGCCCTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VAWIFMAASEFPSWPLYLHSISF*SGALGA
Trigger: TGCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTG...AAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR CCA 90 bp GAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAAGATCCGACAGGGTCGTaGTTTTCAGTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EVLMRFQLAARCLARMRKDPTGS*FSVFCA
Trigger: GGCACAGAACACTGAAAACCACGACCCTGTCGGATC...TTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTTGCGAACTTCACTTCTGCTaGAGATGGAGGTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: AWIFMAASEFPSWPLYLCELHFC*RWRWFP
Trigger: CGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTC...GCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GGTCTGAGGCACGGTGGTACCAGAGGAGATGAAGGGGCTTTCAGCATGAAGCTGTGGGGCTGTCCCAGGTaGATTAGGATCACAAATCTT +
Preference number: 4 (lower is better)
Translates to: GLRHGGTRGDEGAFSMKLWGCPR*IRITNL
Trigger: AAGATTTGTGATCCTAATCCACCTGGGACAGCCCCA...CAGCTTCATGCTGAAAGCCCCTTCATCTCCTCTGGTACCACCGTGCCTCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 72 bp TGTGCCAGTGAACTAATGAGTCTCTTGGACCTTATGTaGCTCTGGCTTCAGTCGAGGCGCGGCTCTAATGGG +
Preference number: 4 (lower is better)
Translates to: CASELMSLLDLM*LWLQSRRGSNG
Trigger: CCCATTAGAGCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR TCA 90 bp CTCCTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGGCTGTTTCAAGACTCTaGATGTCTAGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLEVLMRFQLAARCLARMAVSRL*MSRVSP
Trigger: AGGAGAGACTCTAGACATTCAGAGTCTTGAAACAGC...CATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp TTTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGTCCTCCTGGAGGTCCTaGTGCGATTCCAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FVSWERTSLLLEMEVVPESSWRS*CDSSWL
Trigger: CAGCCAACTGGAATCGCATCAGGACCTCCAGGAGGA...CTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCGATCCGACAGGGTCGTaGTTTTCAGTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIDPTGS*FSVFCA
Trigger: GGCACAGAACACTGAAAACCACGACCCTGTCGGATC...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTTGCGGATCTGGATTAAGATaGATCCGACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: AWIFMAASEFPSWPLYLCGSGLR*IRQGRG
Trigger: ACCACGACCCTGTCGGATCCATCTTAATCCAGATCC...GCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp AACCTGTCCTGCAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTGACGGCTGCATGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 4 (lower is better)
Translates to: NLSCRSLLSSRFPDLTAACWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...TGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp GAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAATGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 4 (lower is better)
Translates to: EVLMRFQLAARCLARMRKCWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...TTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTTGCTGGCTTGGATCTTCATaGCGGCCTCCGAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: AWIFMAASEFPSWPLYLCWLGSS*RPPNFH
Trigger: ATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA...GCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp TTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGGTCATGAGGACCCCCTaGAGATCCTCGCCGATTGTT +
Preference number: 4 (lower is better)
Translates to: LFLGKELHFCWRWRWFPRVMRTP*RSSPIV
Trigger: AACAATCGGCGAGGATCTCCAGGGGGTCCTCATGAC...CCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp ATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAAATGGCAATCACACCTaGTGCCCACTTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ISFCSGALGANKASHLLVNGNHT*CPLLLA
Trigger: CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATT...TACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp GATTGTTCTCAACATCATAGCCAATGCCATGGGCCCTACAGATCTGGAGAAAAAGGATCCACTGAGGTCTaGGGCACGGTGGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: DCSQHHSQCHGPYRSGEKGSTEV*GTVVPE
Trigger: CTCTGGTACCACCGTGCCTCAGACCTCAGTGGATCC...TTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAGAACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp GAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAATGGCCCTTGTACCTTTaGCCTGGAAGATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: EVLMRFQLAARCLARMRKWPLYL*PGRFIS
Trigger: GCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCA...TTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp TTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATACAGTGTTCTGTGCCATaGCTAGGTCAGGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: FLGKNFTSAGDGGGSRGIQCSVP*LGQGTA
Trigger: AGCCGTTCCCTGACCTAGCCATGGCACAGAACACTG...TATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCGGTAATCCTTGCTGTTaGTGGAATCAGCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIGNPCC*WNQPSF
Trigger: GAACGAGGGCTGATTCCACCAACAGCAAGGATTACC...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp TGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTTCGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: WLGSSWRPPNFHLGPCTFRQLKL*KEGHQI
Trigger: AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACG...AAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GCATCTAAGATGTCACACAGCCTCCCCAGCTGCATGTTCTGCTGTGTGTTGAAATCACTGCATAGCGACTaGTTGCCAGCATCGGCATTG +
Preference number: 4 (lower is better)
Translates to: ASKMSHSLPSCMFCCVLKSLHSD*LPASAL
Trigger: CAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGA...TTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 72 bp GGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTaGCCCTGGAAGATTTATCAGCATTTGGACATGAGC +
Preference number: 4 (lower is better)
Translates to: GGLRISILALVP*PWKIYQHLDMS
Trigger: GCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CAA 72 bp GGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAG +
Preference number: 4 (lower is better)
Translates to: GLDLHGGLRISI*ALVPLPWKIYQ
Trigger: CTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CAA 72 bp GTTGCCAGCATCGGCATTGACAGCGCACTCATGCATTaGGTTTTCTTCCTTTCCTTTGGAACAAAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VASIGIDSALMH*VFFLSFGTKRG
Trigger: GCCCCGCTTTGTTCCAAAGGAAAGGAAGAAAACCAAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
3UTR CAA 72 bp TCAGGACACGATTGTGCCAGTGAACTAATGAGTCTCTaGGACCTTATGTTGCTCTGGCTTCAGTCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SGHDCASELMSL*DLMLLWLQSRR
Trigger: GCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTGTCCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR TCA 90 bp GAGTCTTATGGCAATATAACAGCCAAGCAATGGCAATCACACCTGATGCCCACTAATGGCAATCACACCTaGTGCCCACTTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ESYGNITAKQWQSHLMPTNGNHT*CPLLLA
Trigger: CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATT...AGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATAAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR TCA 90 bp TCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAATTAGAACTAAATCCTCCTGGAGGTCCTaGTGCGATTCCAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGALGANKASHLLVIRTKSSWRS*CDSSWL
Trigger: CAGCCAACTGGAATCGCATCAGGACCTCCAGGAGGA...TTTAGTTCTAATTACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp AGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCCTGTCGACAGCACGCTaGTTTTCCCGTTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: SGYSWNLTCFIKTMQRSCLSTAR*FSRWAL
Trigger: TAGAGCCCAACGGGAAAATCAGCGTGCTGTCGACAG...GCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCAGCCCTTGTCAGGTATAAGGTaGGTTGAGTCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GCNGWILKGNPCCWWNQPLSGIR*VESGPA
Trigger: AGCTGGCCCTGACTCAACTCACCTTATACCTGACAA...GGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GGACACGATTGTGCCAGTGAACTAATGAGTCTCTTGGACCTTATGTTGCTCTGGCTATTGCCAGCAGCTTaGGCTTCGGGAGTGCTAATC +
Preference number: 4 (lower is better)
Translates to: GHDCASELMSLLDLMLLWLLPAA*ASGVLI
Trigger: GATTAGCACTCCCGAAGCTCAAGCTGCTGGCAATAG...CCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CCA 90 bp TTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGGGATCTGGATTAAGATaGATCCGACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LFLGKELHFCWRWRWFPRGSGLR*IRQGRG
Trigger: ACCACGACCCTGTCGGATCCATCTTAATCCAGATCC...CCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000535744.5
CDS-3UTR CCA 90 bp GTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTAATCCTTGCTGTTGGTaGAATCAGCCCTCGTTCTAT +
Preference number: 4 (lower is better)
Translates to: VAWIFMAASEFPSWPLYLNPCCW*NQPSFY
Trigger: ATAGAACGAGGGCTGATTCCACCAACAGCAAGGATT...AAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCAGCCCGGTAATCCTTGCTGTTaGTGGAATCAGCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GCNGWILKGNPCCWWNQPGNPCC*WNQPSF
Trigger: GAACGAGGGCTGATTCCACCAACAGCAAGGATTACC...GGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp AAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGAACTTCACTTCTGCTaGAGATGGAGGTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: KNFTSAGDGGGSRGIVKVELHFC*RWRWFP
Trigger: CGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTC...CACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCTGGCTGCCAGATGCTTaGCTCGAATGCGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIWLPDA*LECENS
Trigger: AGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCA...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
3UTR CAA 72 bp ATAATAGTCCTCCTGGAGGTCCTGATGCGATTCCAGTaGGCTGCCAGATGCTTGGCTCGAATGCGAAAATTC +
Preference number: 4 (lower is better)
Translates to: IIVLLEVLMRFQ*AARCLARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAGGACTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR TCA 90 bp ATACCTAATGATGGGATATGGATAATAGTCCTCCTGGAGGTCCTGATGCGATTCAATGGCAATCACACCTaGTGCCCACTTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: IPNDGIWIIVLLEVLMRFNGNHT*CPLLLA
Trigger: CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATT...GAATCGCATCAGGACCTCCAGGAGGACTATTATCCATATCCCATCATTAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR TCA 90 bp ATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAACAAGGGGCCTTCCTTaGACTCAATCAAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ISFCSGALGANKASHLLVTRGLP*TQSRSH
Trigger: ATGGCTCCTTGATTGAGTTCAAGGAAGGCCCCTTGT...TACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp CGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACACAAGGGGCCTTCCTTaGACTCAATCAAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RGSCVITLIMSRTFSCRDTRGLP*TQSRSH
Trigger: ATGGCTCCTTGATTGAGTTCAAGGAAGGCCCCTTGT...GTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp GGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATGACTATGCAGAGGAGCTaGTCTGGGTGTAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: GILRASSKLCRGAALGVMTMQRS*SGCNGW
Trigger: CCACCCATTACACCCAGAGCAGCTCCTCTGCATAGT...CATTACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR GCA 90 bp AAGCGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAACTATGCAGAGGAGCTaGTCTGGGTGTAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: KRGSCVITLIMSRTFSCRTMQRS*SGCNGW
Trigger: CCACCCATTACACCCAGAGCAGCTCCTCTGCATAGT...TCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp AGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAGCGATTCCAGTTGGCTaGCAGATGCTTGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: RVLCYYSHHVENIFLPRPAIPVG*QMLGSN
Trigger: ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGC...TGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGAGCCGCTCGTCCCCATaGCAACACCGCGCGCGACCT +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLSRSSP*QHRARP
Trigger: AGGTCGCGCGCGGTGTTGCCATGGGGACGAGCGGCT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp ACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGATCCGACAGGGTCGTaGTTTTCAGTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TVGILRASSKLCRGAALGDPTGS*FSVFCA
Trigger: GGCACAGAACACTGAAAACCACGACCCTGTCGGATC...ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAAGATCCGACAGGGTCGTaGTTTTCAGTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSCVITLIMSRTFSCRDQDPTGS*FSVFCA
Trigger: GGCACAGAACACTGAAAACCACGACCCTGTCGGATC...TTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp TGCTCTGGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: CSGCNGWILKGNPCCWWNHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...ATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp ACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: TVGILRASSKLCRGAALGHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp TCATGGCCTTCCTATCATGATGTCCTCTTGACCTTCTGCTTTTCCCCTTTGATCCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: SWPSYHDVLLTFCFSPLIHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...GATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
CDS-3UTR CCA 90 bp AGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAGAACTTCACTTCTGCTaGAGATGGAGGTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: RVLCYYSHHVENIFLPRPELHFC*RWRWFP
Trigger: CGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTC...TGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp TTTGCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGGAACTTCACTTCTGCTaGAGATGGAGGTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: FALEDLSAFGHELGPLTLELHFC*RWRWFP
Trigger: CGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTC...CAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
CDS-3UTR CCA 90 bp AGCGAATTACAGCAAATCACCTCTCCACTGAATAGCAGCCCCCACATAATGACTGAACTTCACTTCTGCTaGAGATGGAGGTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SELQQITSPLNSSPHIMTELHFC*RWRWFP
Trigger: CGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTC...AGTCATTATGTGGGGGCTGCTATTCAGTGGAGAGGTGATTTGCTGTAATTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp AATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCAGCCCTCGTTCCGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: NGWILKGNPCCWWNQPSFRQLKL*KEGHQI
Trigger: AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACG...GAACGAGGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp AAGCGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGACATTTCCATGTGGCTTaGATCTTCATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KRGSCVITLIMSRTFSCRHFHVA*IFMAAS
Trigger: GGAGGCCGCCATGAAGATCCAAGCCACATGGAAATG...TCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LGKELHFCWRWRWFPRYSCSISM*LGSSWR
Trigger: CCGCCATGAAGATCCAAGCCACATGGAAATGCTACA...ACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp CGACTGGTTGCCAGCATCGGCATTGACAGCGCACTCATGCATTTGGTTTTCTTCTTTCTTCCTTTCCTTTaGAACAAAGCGGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: RLVASIGIDSALMHLVFFFLPFL*NKAGHF
Trigger: GAAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAA...GAAGAAAACCAAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAACCAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp AGTGAACTAATGAGTCTCTTGGACCTTATGTTGCTCTGGCTTCAGTCGAGGCGCTGGATGATGAAGAGATaGCGAGCAAAGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: SELMSLLDLMLLWLQSRRWMMKR*RAKVMR
Trigger: CCTCATGACCTTTGCTCGCCATCTCTTCATCATCCA...GCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CCA 90 bp CTTCAGTCGAGGCGCGGCTCTAATGGGCATGTAGGACTTCCTATCTGTCAAGTGAATGGGCCCCTCGAATaGATTAGAGAGATTGTATTC +
Preference number: 4 (lower is better)
Translates to: LQSRRGSNGHVGLPICQVNGPLE*IREIVF
Trigger: GAATACAATCTCTCTAATCCATTCGAGGGGCCCATT...CACTTGACAGATAGGAAGTCCTACATGCCCATTAGAGCCGCGCCTCGACTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CCA 90 bp ATTGCCAGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTGACCTTATGTTGCTCTaGCTTCAGTCGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: IASSLSFGSANQNSHAKLDLMLL*LQSRRG
Trigger: GCCGCGCCTCGACTGAAGCCAGAGCAACATAAGGTC...AAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
3UTR CAA 72 bp ATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTaGTACCTTTGCCCTGGAAGATTTATCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: IFMAASEFPSWP*YLCPGRFISIW
Trigger: CCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR TCA 90 bp TTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGGCTGTTTCAAGACTCTaGATGTCTAGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LFLGKELHFCWRWRWFPRAVSRL*MSRVSP
Trigger: AGGAGAGACTCTAGACATTCAGAGTCTTGAAACAGC...CCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000535744.5
CDS-3UTR TCA 90 bp TTCCTTTGGAACAAAGCGGGGCACTTCCAGGGTGCTCAAACTGCAATCCAGATGCCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: FLWNKAGHFQGAQTAIQMPLQSF*LLFQDS
Trigger: AGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGG...CATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCCGCTTTGTTCCAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCGTAATGGGTGGATTCTaGAAGGTAATCCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIVMGGF*KVILAV
Trigger: AACAGCAAGGATTACCTTTCAGAATCCACCCATTAC...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR TCA 90 bp TGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTTTGTTCTGCTGTGTGTTaGAATCGGCAATATGTTCTC +
Preference number: 4 (lower is better)
Translates to: WLGSSWRPPNFHLGPCTFCSAVC*NRQYVL
Trigger: GAGAACATATTGCCGATTTCAACACACAGCAGAACA...AAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp AGCACTTTAGGTAGGAAGGAATATCACAAAATGCAGTCCCATTTCCTCGGAACTGGAACCGTTTCTCATTaGCTGGCTGTGCGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: STLGRKEYHKMQSHFLGTGTVSH*LAVRAV
Trigger: CACAGCACGCACAGCCAGTCAATGAGAAACGGTTCC...AGTTCCGAGGAAATGGGACTGCATTTTGTGATATTCCTTCCTACCTAAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCAGCCCTCACACCCCCTTGACTaGGAAATGTTTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: GCNGWILKGNPCCWWNQPSHPLD*EMFGGI
Trigger: AATTCCTCCAAACATTTCTCAGTCAAGGGGGTGTGA...GGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp CTGTATTTGCAGGTGATCAGTTATCAGCTGACTCAGCTGCTCTATCATAGGGAAAGGTATAAGGTGAGTTaGGTCAGGGCCAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LYLQVISYQLTQLLYHRERYKVS*VRASWS
Trigger: TGACCAGCTGGCCCTGACTCAACTCACCTTATACCT...TTCCCTATGATAGAGCAGCTGAGTCAGCTGATAACTGATCACCTGCAAATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GGACACGATTGTGCCAGTGAACTAATGAGTCTCTTGGACCTTATGTTGCTCTGGTATCTGTCAAGTGTCTaGACAATGGGCCCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: GHDCASELMSLLDLMLLWYLSSV*TMGPSN
Trigger: ATTCGAGGGGCCCATTGTTCAGACACTTGACAGATA...CCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACTGGCACAATCGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR TCA 90 bp AGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTTCCGATGGGGCTCTCACCATGTaGATGATCCACTACTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSLSFGSANQNSHAKLSDGALTM*MIHYCA
Trigger: GGCACAGTAGTGGATCATTCACATGGTGAGAGCCCC...ATCGGAAAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACACAGCCTCCCCAGCTaGATGTTCTGCTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILHSLPS*MFCCVL
Trigger: CAACACACAGCAGAACATGCAGCTGGGGAGGCTGTG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp TCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAATTAGAACTAAACACAGCATTTCCTTTTaGTCAGGCGCCCTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SGALGANKASHLLVIRTKHSISF*SGALGA
Trigger: TGCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTG...TTTAGTTCTAATTACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp TCATGGCCTTCCTATCATGATGTCCTCTTGACCTTCTGCTTTTCCCCTTTGATCTGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 4 (lower is better)
Translates to: SWPSYHDVLLTFCFSPLICWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...GATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
CDS-3UTR CCA 90 bp GTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: VQAISWLIGVTATTHTSLHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...CAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp ACCTTTGCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: TFALEDLSAFGHELGPLTRQLKL*KEGHQI
Trigger: AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACG...TGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
CDS-3UTR CCA 90 bp AAGCGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGACGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: KRGSCVITLIMSRTFSCRRQLKL*KEGHQI
Trigger: AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACG...TCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp ATTGTCTGCAGGTGGGAATGCTTCGATCACACCCCCTTGACTGAGAAATGTTTGATAACAGCCAAGCAATaGCAATCACACCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: IVCRWECFDHTPLTEKCLITAKQ*QSHLMP
Trigger: GGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTAT...CAAACATTTCTCAGTCAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp TGTTCACACAGCATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCATAACAGCCAAGCAATaGCAATCACACCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: CSHSISFCSGALGANKASITAKQ*QSHLMP
Trigger: GGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTAT...GGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp ATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTATGGCTGCCAGATGCTTaGCTCGAATGCGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: ISFCSGALGANKASHLLVWLPDA*LECENS
Trigger: AGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCA...TACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp TTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATATGTTCTCTCACAGGCTaGGAATACCCTAATGATGGG +
Preference number: 4 (lower is better)
Translates to: FLGKNFTSAGDGGGSRGICSLTG*EYPNDG
Trigger: CCCATCATTAGGGTATTCCCAGCCTGTGAGAGAACA...TATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp AGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTTCCGATGTCATGAGGACCCCCTaGAGATCCTCGCCGATTGTT +
Preference number: 4 (lower is better)
Translates to: SSLSFGSANQNSHAKLSDVMRTP*RSSPIV
Trigger: AACAATCGGCGAGGATCTCCAGGGGGTCCTCATGAC...ATCGGAAAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CCA 90 bp GGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATGATCCCTGGATTAAGATaGATCCGACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GILRASSKLCRGAALGVMIPGLR*IRQGRG
Trigger: ACCACGACCCTGTCGGATCCATCTTAATCCAGGGAT...CATTACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR TCA 90 bp GCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGAGCTGTTTCAAGACTCTaGATGTCTAGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ALEDLSAFGHELGPLTLRAVSRL*MSRVSP
Trigger: AGGAGAGACTCTAGACATTCAGAGTCTTGAAACAGC...TCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000561339.1
CDS-3UTR TCA 90 bp TGTTCACACAGCATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCATCATGATGTCCTCTTaGCCTTCTGCTTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: CSHSISFCSGALGANKASIMMSS*PSAFPL
Trigger: AAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGAT...GGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp GGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATGATGGCCTTCCTATCATaGTGTCCTCTTGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: GILRASSKLCRGAALGVMMAFLS*CPLDLL
Trigger: CAGAAGGTCAAGAGGACATCATGATAGGAAGGCCAT...CATTACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR TCA 90 bp AGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAATGGCCTTCCTATCATaGTGTCCTCTTGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: RVLCYYSHHVENIFLPRPMAFLS*CPLDLL
Trigger: CAGAAGGTCAAGAGGACATCATGATAGGAAGGCCAT...TGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp ACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TVGILRASSKLCRGAALGVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR TCA 90 bp AAGCGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAATCAGCATTTGGACATaGGCTGGGTCCTCTAACACT +
Preference number: 4 (lower is better)
Translates to: KRGSCVITLIMSRTFSCRISIWT*AGSSNT
Trigger: AGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGAT...TCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp CCACATAATGACTTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGTCCTCCTGGAGGTCCTaGTGCGATTCCAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PHNDFICLIPKLNAVSSESSWRS*CDSSWL
Trigger: CAGCCAACTGGAATCGCATCAGGACCTCCAGGAGGA...CTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAAGTCATTATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTGTGGAGGAGCCCGCTaGCGATGTAGGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNCGGAR*RCRPLF
Trigger: GAACAGAGGCCTACATCGTCAGCGGGCTCCTCCACA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR TCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAAGGGGCTTTCAGCATaGAGCTGGTCCCCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSKGLSA*SWSPVD
Trigger: GTCGACAGGGGACCAGCTTCATGCTGAAAGCCCCTT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGGATCCACTGAGGTCTaGGGCACGGTGGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRGSTEV*GTVVPE
Trigger: CTCTGGTACCACCGTGCCTCAGACCTCAGTGGATCC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AGCACTTTAGGTAGGAAGGAATATCACAAAATGCAGTCCCATTTCCTCGGAACTTGCCAGCATCGGCATTaGCAGCGCACTCATGCATTT +
Preference number: 4 (lower is better)
Translates to: STLGRKEYHKMQSHFLGTCQHRH*QRTHAF
Trigger: AAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCA...AGTTCCGAGGAAATGGGACTGCATTTTGTGATATTCCTTCCTACCTAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp CTGGTCACTATATGCGAGGTTAAGGCCGGTTGCCCACACCTGTTGTTCCAAGGTTGGACAATTATGAAGTaGATGCTGAAAGTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LVTICEVKAGCPHLLFQGWTIMK*MLKVRV
Trigger: GACTCTAACTTTCAGCATTCACTTCATAATTGTCCA...ACCTTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTCGCATATAGTGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCGACTTTCATGGCCTTTaGTCTTTGTTTCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIDFHGL*SLFLGK
Trigger: TTTCCCAAGAAACAAAGATCAAAGGCCATGAAAGTC...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR TCA 90 bp AGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCACTGCCGAGACCAATTTaGATAAAACAAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RVLCYYSHHVENIFLPRPLPRPI*IKQGAF
Trigger: GAAGGCCCCTTGTTTTATTCAAATTGGTCTCGGCAG...TGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp AGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCGCTTCATCAAAACTATaGAGAGGAGCTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SGYSWNLTCFIKTMQRSCASSKL*RGAALG
Trigger: ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGC...GCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR GCA 90 bp AAGCGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGCTTCATCAAAACTATaGAGAGGAGCTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KRGSCVITLIMSRTFSCRASSKL*RGAALG
Trigger: ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGC...TCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp GAGTCTTATGGCAATATAACAGCCAAGCAATGGCAATCACACCTGATGCCCACTTGGCCCTTGTACCTTTaGCCTGGAAGATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: ESYGNITAKQWQSHLMPTWPLYL*PGRFIS
Trigger: GCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCA...AGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATAAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR GCA 90 bp TGTAGCACTTTAGGTAGGAAGGAATATCACAAAATGCAGTCCCATTTCCTCGGAGCGATTCCAGTTGGCTaGCAGATGCTTGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: CSTLGRKEYHKMQSHFLGAIPVG*QMLGSN
Trigger: ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGC...TCCGAGGAAATGGGACTGCATTTTGTGATATTCCTTCCTACCTAAAGTGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp AGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCCAAAGCTGGCTCTTGTaGCCATTTCTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SGYSWNLTCFIKTMQRSCQSWLL*PFLSPV
Trigger: GACTGGAGAAAGAAATGGGCACAAGAGCCAGCTTTG...GCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGAGGTTAAGGCCGGTTaGCCACACCTGTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILEVKAG*PHLLFQ
Trigger: TTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACAGCTGGTCACTATATaGGAGGTTAAGGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILQLVTI*EVKAGC
Trigger: GCAACCGGCCTTAACCTCGCATATAGTGACCAGCTG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTCGAATGCGAAAATTCTCCAGGTGTCTCTGACGTGATTCCTTTAGTATCTTCTGGGGCACTTCCAGGGTaGTCAAACTGCAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: LECENSPGVSDVIPLVSSGALPG*SNCNPD
Trigger: ATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCC...AGAAGATACTAAAGGAATCACGTCAGAGACACCTGGAGAATTTTCGCATTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp TATGGCAATATAACAGCCAAGCAATGGCAATCACACCTGATGCCCACTTCTGCTAAACCAGTGAGAGATTaGTGTGTCTTAGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: YGNITAKQWQSHLMPTSAKPVRD*CVLAGW
Trigger: CCACCCAGCTAAGACACAGCAATCTCTCACTGGTTT...AGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp GTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTACCCTATCTTTCGCTTTaGTCTTGGAAAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGILRASSKLCRGAALGVPYLSL*SWKDRQ
Trigger: CTGCCTGTCTTTCCAAGAGCAAAGCGAAAGATAGGG...TACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CCA 90 bp CCTCCCCAGCTGCATGTTCTGCTGTGTGTTGAAATCGGCAATATGTTCTCTCACAGGTCTTCATGGATCTaGATTAAGATGGATCCGACA +
Preference number: 4 (lower is better)
Translates to: PPQLHVLLCVEIGNMFSHRSSWI*IKMDPT
Trigger: TGTCGGATCCATCTTAATCCAGATCCATGAAGACCT...GTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp TTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGGAAAGTGGCTACAGTTaGAATCTTACGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LFLGKELHFCWRWRWFPRESGYS*NLTCFI
Trigger: GATGAAGCACGTAAGATTCCAACTGTAGCCACTTTC...CCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp GTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGTGGCTTGGATCTTCATaGCGGCCTCCGAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: VQAISWLIGVTATTHTSLWLGSS*RPPNFH
Trigger: ATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA...CAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACATTTCCATGTGGCTTaGATCTTCATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILHFHVA*IFMAAS
Trigger: GGAGGCCGCCATGAAGATCCAAGCCACATGGAAATG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CACAAATCTTCCTATCATGATGTCCTCTTGACCTTCTGCTTTTCCCCTTTGATCCATTTCCATGTGGCTTaGATCTTCATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HKSSYHDVLLTFCFSPLIHFHVA*IFMAAS
Trigger: GGAGGCCGCCATGAAGATCCAAGCCACATGGAAATG...GATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGATTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp AGCGAATTACAGCAAATCACCTCTCCACTGAATAGCAGCCCCCACATAATGACTTGGCTGCCAGATGCTTaGCTCGAATGCGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: SELQQITSPLNSSPHIMTWLPDA*LECENS
Trigger: AGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCA...AGTCATTATGTGGGGGCTGCTATTCAGTGGAGAGGTGATTTGCTGTAATTCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTCCTAATGATGGGATATaGATAATAGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGKELHFCWRWRWFPRYSPNDGI*IIVLLE
Trigger: CTCCAGGAGGACTATTATCCATATCCCATCATTAGG...ACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR TCA 90 bp TTTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGCCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: FVSWERTSLLLEMEVVPEPLQSF*LLFQDS
Trigger: AGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGG...CTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000535744.5
CDS-3UTR TCA 90 bp GCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGACCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: ALEDLSAFGHELGPLTLRPLQSF*LLFQDS
Trigger: AGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGG...TCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000561339.1
CDS-3UTR TCA 90 bp CTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGAGAAATGGCCTTCCTATCATaGTGTCCTCTTGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: LEDLSAFGHELGPLTLREMAFLS*CPLDLL
Trigger: CAGAAGGTCAAGAGGACATCATGATAGGAAGGCCAT...TTCTCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
CDS-3UTR TCA 90 bp TGTTCACACAGCATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCCTCTCAAAGGTGTTTTaGCTTTCATGGCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: CSHSISFCSGALGANKASLSKVF*LSWPSY
Trigger: ATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAG...GGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp GACTTCTGGTATAGCATAGTTCCTGAGAAACTTCTCGACGTGTTCCAAGAGAGAGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DFWYSIVPEKLLDVFQERVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...TCTCTCTTGGAACACGTCGAGAAGTTTCTCAGGAACTATGCTATACCAGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
CDS-3UTR TCA 90 bp GACTTCTGGTATAGCATAGTTCCTGAGAAACTTCTCGACGTGTTCCAAGAGAGAATCAGCATTTGGACATaGGCTGGGTCCTCTAACACT +
Preference number: 4 (lower is better)
Translates to: DFWYSIVPEKLLDVFQERISIWT*AGSSNT
Trigger: AGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGAT...TCTCTCTTGGAACACGTCGAGAAGTTTCTCAGGAACTATGCTATACCAGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
CDS-3UTR TCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAATGGCAATCACACCTaGTGCCCACTTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSNGNHT*CPLLLA
Trigger: CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTTTCTCCAGGTGTCTCTaGCGTGATTCCTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: TVGILRASSKLCRGAALGFSRCL*RDSFSI
Trigger: GATACTAAAGGAATCACGTCAGAGACACCTGGAGAA...ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR TCA 90 bp TGCTCTGGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATTTCTCCAGGTGTCTCTaGCGTGATTCCTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: CSGCNGWILKGNPCCWWNFSRCL*RDSFSI
Trigger: GATACTAAAGGAATCACGTCAGAGACACCTGGAGAA...ATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATCCTCCTGGAGGTCCTaGTGCGATTCCAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRSSWRS*CDSSWL
Trigger: CAGCCAACTGGAATCGCATCAGGACCTCCAGGAGGA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CCGAATTTCCATCTTGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTCAAGGTTCCCAGATTTaGCGGCTGCATGTAGACTTA +
Preference number: 4 (lower is better)
Translates to: PNFHLGPCTFALEDLSAFQGSQI*RLHVDL
Trigger: TAAGTCTACATGCAGCCGTCAAATCTGGGAACCTTG...AAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGGAACCGTTTCTCATTaGCTGGCTGTGCGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSGTVSH*LAVRAV
Trigger: CACAGCACGCACAGCCAGTCAATGAGAAACGGTTCC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTCGAATGCGAAAATTCTCCAGGTGTCTCTGACGTGATTCCTTTAGTATCTTCTTGGTACCAGAGGAGATaGAGGGGCTTTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: LECENSPGVSDVIPLVSSWYQRR*RGFQHE
Trigger: TTCATGCTGAAAGCCCCTTCATCTCCTCTGGTACCA...AGAAGATACTAAAGGAATCACGTCAGAGACACCTGGAGAATTTTCGCATTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGGATCCACTGAGGTCTaGGGCACGGTGGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIGSTEV*GTVVPE
Trigger: CTCTGGTACCACCGTGCCTCAGACCTCAGTGGATCC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGGATCCACTGAGGTCTaGGGCACGGTGGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNGSTEV*GTVVPE
Trigger: CTCTGGTACCACCGTGCCTCAGACCTCAGTGGATCC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AAACAGTGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACACTATGCAGAGGAGCTaGTCTGGGTGTAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: KQCTSNILAYWRNSNNTYTMQRS*SGCNGW
Trigger: CCACCCATTACACCCAGAGCAGCTCCTCTGCATAGT...GTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTAGCGATTCCAGTTGGCTaGCAGATGCTTGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLAIPVG*QMLGSN
Trigger: ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGC...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACCCAGCTGCATGTTCTaGTGTGTGTTGAAATCGGCA +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILPSCMF*CVLKSA
Trigger: TGCCGATTTCAACACACAGCAGAACATGCAGCTGGG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTTGACTGGCTGTGCGTaGTGTGCTAAAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSLTGCA*CAKMPA
Trigger: GGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp GTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTCTTTGGTTAACTAGATaGTGGCTTATCCTACTTTTT +
Preference number: 4 (lower is better)
Translates to: VAWIFMAASEFPSWPLYLLWLTR*WLILLF
Trigger: AAAAAGTAGGATAAGCCAGCATCTAGTTAACCAAAG...AAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp ATTGCCAGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTTCTTGGACCTTATGTTaGTCTGGCTTCAGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: IASSLSFGSANQNSHAKLSWTLC*SGFSRG
Trigger: GCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGA...AAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCAGTGTTCTGTGCCATaGCTAGGTCAGGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSQCSVP*LGQGTA
Trigger: AGCCGTTCCCTGACCTAGCCATGGCACAGAACACTG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp ATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGTACCAGGATCCGACAGGGTCGTaGTTTTCAGTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: IIKSNWNWMSVREHEQYQDPTGS*FSVFCA
Trigger: GGCACAGAACACTGAAAACCACGACCCTGTCGGATC...CTGGTACTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp AGCGAATTACAGCAAATCACCTCTCCACTGAATAGCAGCCCCCACATAATGACTAATCCTTGCTGTTGGTaGAATCAGCCCTCGTTCTAT +
Preference number: 4 (lower is better)
Translates to: SELQQITSPLNSSPHIMTNPCCW*NQPSFY
Trigger: ATAGAACGAGGGCTGATTCCACCAACAGCAAGGATT...AGTCATTATGTGGGGGCTGCTATTCAGTGGAGAGGTGATTTGCTGTAATTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CAGTGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGTGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 4 (lower is better)
Translates to: QCTSNILAYWRNSNNTYKCWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...CTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CCGAATTTCCATCTTGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PNFHLGPCTFALEDLSAFCSISM*LGSSWR
Trigger: CCGCCATGAAGATCCAAGCCACATGGAAATGCTACA...AAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp AGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGTGTTCTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGG +
Preference number: 4 (lower is better)
Translates to: SNILAYWRNSNNTYKPVFCSISM*LGSSWR
Trigger: CCGCCATGAAGATCCAAGCCACATGGAAATGCTACA...GAACACAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp GTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGATAACAGCCAAGCAATaGCAATCACACCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: VQAISWLIGVTATTHTSLITAKQ*QSHLMP
Trigger: GGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTAT...CAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCTTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIFSRVL*QYNSQA
Trigger: TGCTTGGCTGTTATATTGCCATAAGACTCGACTAAA...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp AAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGCCTAATGATGGGATATaGATAATAGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KNFTSAGDGGGSRGIVKVPNDGI*IIVLLE
Trigger: CTCCAGGAGGACTATTATCCATATCCCATCATTAGG...CACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp TGTTCACACAGCATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCCCTAATGATGGGATATaGATAATAGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CSHSISFCSGALGANKASPNDGI*IIVLLE
Trigger: CTCCAGGAGGACTATTATCCATATCCCATCATTAGG...GGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGACATTGTCTGCAGGTaGGAATGCTTCGATCACACC +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILDIVCR*ECFDHT
Trigger: GGTGTGATCGAAGCATTCCCACCTGCAGACAATGTC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATGTGTCTTAGCTGGGTaGTCATCACTGCATAGCGAC +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILCVLAG*SSLHSD
Trigger: GTCGCTATGCAGTGATGACCACCCAGCTAAGACACA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CACAAATCTTCCTATCATGATGTCCTCTTGACCTTCTGCTTTTCCCCTTTGATCTGTGTCTTAGCTGGGTaGTCATCACTGCATAGCGAC +
Preference number: 4 (lower is better)
Translates to: HKSSYHDVLLTFCFSPLICVLAG*SSLHSD
Trigger: GTCGCTATGCAGTGATGACCACCCAGCTAAGACACA...GATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp CTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGAGAATGGATGATGAAGAGATaGCGAGCAAAGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: LEDLSAFGHELGPLTLREWMMKR*RAKVMR
Trigger: CCTCATGACCTTTGCTCGCCATCTCTTCATCATCCA...TTCTCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp GGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAAGGAGCCATAATGTGGTaGGTAATAGAGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GSCVITLIMSRTFSCRDQGAIMW*VIEVAD
Trigger: ATCAGCAACCTCTATTACCCACCACATTATGGCTCC...TTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp GGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCAGCCCAATATCCTGGCTTATTaGCGTAACAGCAACAACACA +
Preference number: 4 (lower is better)
Translates to: GCNGWILKGNPCCWWNQPNILAY*RNSNNT
Trigger: TGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATT...GGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
3UTR CAA 72 bp GAACTCAGAGTCCATTTTAAAGAGCCAACGCTGTATTaGCAGGTGATCAGTTATCAGCTGACTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ELRVHFKEPTLY*QVISYQLTQLL
Trigger: GAGCAGCTGAGTCAGCTGATAACTGATCACCTGCAAATACAGCGTTGGCTCTTTAAAATGGACTCTGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp CACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTCCTATCAATCATGATGTCCTCTTaGCCTTCTGCTTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HSDFRALKGVLTFMAFLSIMMSS*PSAFPL
Trigger: AAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGAT...TGATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
CDS-3UTR TCA 90 bp TTTGCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGCTCTCAAAGGTGTTTTaGCTTTCATGGCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FALEDLSAFGHELGPLTLLSKVF*LSWPSY
Trigger: ATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAG...CAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
CDS-3UTR TCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAATCAGCATTTGGACATaGGCTGGGTCCTCTAACACT +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILISIWT*AGSSNT
Trigger: AGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGAT...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAAATGGCAATCACACCTaGTGCCCACTTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRNGNHT*CPLLLA
Trigger: CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTCCTCCTGGAGGTCCTaGTGCGATTCCAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLSSWRS*CDSSWL
Trigger: CAGCCAACTGGAATCGCATCAGGACCTCCAGGAGGA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGGAACCGTTTCTCATTaGCTGGCTGTGCGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRGTVSH*LAVRAV
Trigger: CACAGCACGCACAGCCAGTCAATGAGAAACGGTTCC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATAAGGGGCTTTCAGCATaGAGCTGGTCCCCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNKGLSA*SWSPVD
Trigger: GTCGACAGGGGACCAGCTTCATGCTGAAAGCCCCTT...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAGGTATAAGGTGAGTTaGGTCAGGGCCAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSRYKVS*VRASWS
Trigger: TGACCAGCTGGCCCTGACTCAACTCACCTTATACCT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp TATGGCAATATAACAGCCAAGCAATGGCAATCACACCTGATGCCCACTTCTGCTGGTGCTGATATTTCTTaGTGGATGATGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: YGNITAKQWQSHLMPTSAGADIS*WMMKRW
Trigger: CCATCTCTTCATCATCCATCAAGAAATATCAGCACC...AGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp GCCAGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTTCCGGTGCTGATATTTCTTaGTGGATGATGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: ASSLSFGSANQNSHAKLSGADIS*WMMKRW
Trigger: CCATCTCTTCATCATCCATCAAGAAATATCAGCACC...GGAAAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR TCA 90 bp TGCTCTGGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCTCTCAAAGGTGTTTTaGCTTTCATGGCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: CSGCNGWILKGNPCCWWNLSKVF*LSWPLI
Trigger: GATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAG...ATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR GCA 90 bp TTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTTGTTTCTTGGGCAGAGATGAACTGTaGTGTCTTTGGGGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FRALKGVLTFMAFDLCFLGRDEL*CLWGCQ
Trigger: TTGGCAACCCCAAAGACAGCACAGTTCATCTCTGCC...CAAGAAACAAAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTACTATGCAGAGGAGCTaGTCTGGGTGTAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSTMQRS*SGCNGW
Trigger: CCACCCATTACACCCAGAGCAGCTCCTCTGCATAGT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGCTTCATCAAAACTATaGAGAGGAGCTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILASSKL*RGAALG
Trigger: ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR GCA 90 bp TGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGATGCTTGGCTCGAATaGGAAAATTCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: CTSNILAYWRNSNNTYKPDAWLE*ENSPGV
Trigger: GACACCTGGAGAATTTTCGCATTCGAGCCAAGCATC...AGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACACAGCCTCCCCAGCTaGATGTTCTGCTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRHSLPS*MFCCVL
Trigger: CAACACACAGCAGAACATGCAGCTGGGGAGGCTGTG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ATTGTCTGCAGGTGGGAATGCTTCGATCACACCCCCTTGACTGAGAAATGTTTGAGGAATATCACAAAATaGAGTCCCATTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: IVCRWECFDHTPLTEKCLRNITK*SPISSE
Trigger: TTCCGAGGAAATGGGACTGCATTTTGTGATATTCCT...CAAACATTTCTCAGTCAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACTTCAAGGCCATATCTaGTACTCTCCTTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILLQGHI*YSPLAP
Trigger: GGGTGCTAAAGGAGAGTAGCAGATATGGCCTTGAAG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCGTGCTGTGCTAAAATaGCCGCCAGCTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNRAVLK*PPAPQR
Trigger: TCTCTGAGGAGCTGGCGGGCATTTTAGCACAGCACG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGTCTGCAGGTGGGAATaGTTCGATCACACCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNVCRWE*FDHTPL
Trigger: CAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGAC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCAGCTGGTCACTATATaGGAGGTTAAGGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSQLVTI*EVKAGC
Trigger: GCAACCGGCCTTAACCTCGCATATAGTGACCAGCTG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGGGGCACTTCCAGGGTaGTCAAACTGCAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSGALPG*SNCNPD
Trigger: ATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACTGGGTGGTCATCACTaGATAGCGACTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRLGGHH*IATGCQ
Trigger: CTGGCAACCAGTCGCTATGCAGTGATGACCACCCAG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCTGGGTGGTCATCACTaGATAGCGACTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNLGGHH*IATGCQ
Trigger: CTGGCAACCAGTCGCTATGCAGTGATGACCACCCAG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAAAACCAGTGAGAGATTaGTGTGTCTTAGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILKPVRD*CVLAGW
Trigger: CCACCCAGCTAAGACACAGCAATCTCTCACTGGTTT...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGTGTTCTGTGCCATaGCTAGGTCAGGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: MCCIIKSNWNWMSVREHEQCSVP*LGQGTA
Trigger: AGCCGTTCCCTGACCTAGCCATGGCACAGAACACTG...TTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp AGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAGGTCTTCATGGATCTaGATTAAGATGGATCCGACA +
Preference number: 4 (lower is better)
Translates to: SWNLTCFIKTMQRSCSGCRSSWI*IKMDPT
Trigger: TGTCGGATCCATCTTAATCCAGATCCATGAAGACCT...ACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000535744.5
CDS-3UTR CCA 90 bp TTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTTGTTTCTTGTGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 4 (lower is better)
Translates to: FRALKGVLTFMAFDLCFLCWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...CAAGAAACAAAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCATTTCCATGTGGCTTaGATCTTCATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSHFHVA*IFMAAS
Trigger: GGAGGCCGCCATGAAGATCCAAGCCACATGGAAATG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATGTTCTCTCACAGGCTaGGAATACCCTAATGATGGG +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILCSLTG*EYPNDG
Trigger: CCCATCATTAGGGTATTCCCAGCCTGTGAGAGAACA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTCACTGCATAGCGACTaGTTGCCAGCATCGGCATTG +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSSLHSD*LPASAL
Trigger: CAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGTCATGAGGACCCCCTaGAGATCCTCGCCGATTGTT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRVMRTP*RSSPIV
Trigger: AACAATCGGCGAGGATCTCCAGGGGGTCCTCATGAC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGTCATGAGGACCCCCTaGAGATCCTCGCCGATTGTT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNVMRTP*RSSPIV
Trigger: AACAATCGGCGAGGATCTCCAGGGGGTCCTCATGAC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp TCCCACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATTTTACAGCAGCTCTGTaGTGGATGTTTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: SHSDFRALKGVLTFMAFDFTAAL*WMFSGS
Trigger: GGATCCTGAAAACATCCACCACAGAGCTGCTGTAAA...ATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CCA 90 bp ATACCTAATGATGGGATATGGATAATAGTCCTCCTGGAGGTCCTGATGCGATTCCAAGGAGCCATAATGTaGTGGGTAATAGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: IPNDGIWIIVLLEVLMRFQGAIM*WVIEVA
Trigger: AGCAACCTCTATTACCCACCACATTATGGCTCCTTG...GAATCGCATCAGGACCTCCAGGAGGACTATTATCCATATCCCATCATTAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR CCA 90 bp AGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAGTACAAGCAATATCCTaGCTTATTGGCGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: RVLCYYSHHVENIFLPRPVQAIS*LIGVTA
Trigger: TGCTGTTACGCCAATAAGCCAGGATATTGCTTGTAC...TGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
3UTR CAA 72 bp ATAGGGAAGATGTTTACAGCTTCAGGTGTGATAATTTaGAACCTGTCCTGCAGGTCACTTCTGTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: IGKMFTASGVII*NLSCRSLLSSR
Trigger: CCTTGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAATTATCACACCTGAAGCTGTAAACATCTTCCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp TTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTTGTTTCTTGGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FRALKGVLTFMAFDLCFLVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...CAAGAAACAAAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR TCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTAGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTAATGGCAATCACACCTaGTGCCCACTTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIINGNHT*CPLLLA
Trigger: CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATT...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR TCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGGGAACCGTTTCTCATTaGCTGGCTGTGCGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLGTVSH*LAVRAV
Trigger: CACAGCACGCACAGCCAGTCAATGAGAAACGGTTCC...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATCACACCCCCTTGACTaGGAAATGTTTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILSHPLD*EMFGGI
Trigger: AATTCCTCCAAACATTTCTCAGTCAAGGGGGTGTGA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTCGATCACACCCCCTTaGCTGAGAAATGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSSITPP*LRNVWR
Trigger: CCTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGCTGTCGACAGCACGCTaGTTTTCCCGTTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLLSTAR*FSRWAL
Trigger: TAGAGCCCAACGGGAAAATCAGCGTGCTGTCGACAG...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCTGTCGACAGCACGCTaGTTTTCCCGTTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNLSTAR*FSRWAL
Trigger: TAGAGCCCAACGGGAAAATCAGCGTGCTGTCGACAG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACAGGTATAAGGTGAGTTaGGTCAGGGCCAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNRYKVS*VRASWS
Trigger: TGACCAGCTGGCCCTGACTCAACTCACCTTATACCT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTTGTCAGGTATAAGGTaGGTTGAGTCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSLSGIR*VESGPA
Trigger: AGCTGGCCCTGACTCAACTCACCTTATACCTGACAA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATGCCAGCATCGGCATTaGCAGCGCACTCATGCATTT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRCQHRH*QRTHAF
Trigger: AAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp TGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGGGAACTGGATGTCAGTaGGGGAACATGAACAGTACC +
Preference number: 4 (lower is better)
Translates to: CCIIKSNWNWMSVREHEQGTGCQ*GNMNST
Trigger: GGTACTGTTCATGTTCCCTCACTGACATCCAGTTCC...CTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR TCA 90 bp AGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTTTCCGATACACGATTGTGCCAGTaGACTAATGAGTCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSLSFGSANQNSHAKLSDTRLCQ*TNESLG
Trigger: TCCAAGAGACTCATTAGTTCACTGGCACAATCGTGT...ATCGGAAAGTTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR GCA 90 bp TGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGGGCAGAGATGAACTGTaGTGTCTTTGGGGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CCIIKSNWNWMSVREHEQGRDEL*CLWGCQ
Trigger: TTGGCAACCCCAAAGACAGCACAGTTCATCTCTGCC...CTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGCGATTCCAGTTGGCTaGCAGATGCTTGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNAIPVG*QMLGSN
Trigger: ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGCGATTCCAGTTGGCTaGCAGATGCTTGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRAIPVG*QMLGSN
Trigger: ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCCCAGCTGCATGTTCTaGTGTGTGTTGAAATCGGCA +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSPSCMF*CVLKSA
Trigger: TGCCGATTTCAACACACAGCAGAACATGCAGCTGGG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCACAGCCTCCCCAGCTaGATGTTCTGCTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIHSLPS*MFCCVL
Trigger: CAACACACAGCAGAACATGCAGCTGGGGAGGCTGTG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGCACTTTAGGTAGGAAGGAATATCACAAAATGCAGTCCCATTTCCTCGGAACTATTTTGAACCTGTCCTaGAGGTCACTTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: STLGRKEYHKMQSHFLGTILNLS*RSLLSS
Trigger: TGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAAT...AGTTCCGAGGAAATGGGACTGCATTTTGTGATATTCCTTCCTACCTAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCGTGCTGTGCTAAAATaGCCGCCAGCTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIRAVLK*PPAPQR
Trigger: TCTCTGAGGAGCTGGCGGGCATTTTAGCACAGCACG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTTGACTGGCTGTGCGTaGTGTGCTAAAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLLTGCA*CAKMPA
Trigger: GGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTTGACTGGCTGTGCGTaGTGTGCTAAAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNLTGCA*CAKMPA
Trigger: GGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGTCTGCAGGTGGGAATaGTTCGATCACACCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNVCRWE*FDHTPL
Trigger: CAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGAC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGGTCTGCAGGTGGGAATaGTTCGATCACACCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLVCRWE*FDHTPL
Trigger: CAAGGGGGTGTGATCGAAGCATTCCCACCTGCAGAC...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCCAGGGTGCTCAAACTaGAATCCAGATGGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNPGCSN*NPDGRL
Trigger: CAAACGGCCATCTGGATTGCAGTTTGAGCACCCTGG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGGGGCACTTCCAGGGTaGTCAAACTGCAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNGALPG*SNCNPD
Trigger: ATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTCAACATCATAGCCAATGCCATGGGCCCTACAGATCTGGAGAAAAACATAGTGTTGACAGCGCACTCATaGATTTGGTTTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LNIIANAMGPTDLEKNIVLTAHS*IWFSSF
Trigger: AAAGGAAGAAAACCAAATGCATGAGTGCGCTGTCAA...CACTATGTTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCTGGGTGGTCATCACTaGATAGCGACTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNLGGHH*IATGCQ
Trigger: CTGGCAACCAGTCGCTATGCAGTGATGACCACCCAG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CATGTAGGACTTCCTATCTGTCAAGTGTCTGAACAATGGGCCCCTCGAATGGATAAATTGGTCTCGCCTTaGATATTAGGTGCTGATATT +
Preference number: 4 (lower is better)
Translates to: HVGLPICQVSEQWAPRMDKLVSP*ILGADI
Trigger: AATATCAGCACCTAATATGCAAGGCGAGACCAATTT...ATCCATTCGAGGGGCCCATTGTTCAGACACTTGACAGATAGGAAGTCCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR GCA 90 bp CATGTAGGACTTCCTATCTGTCAAGTGTCTGAACAATGGGCCCCTCGAATGGATTCATCTTTGGACTGTTaGTCCTCTTCAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: HVGLPICQVSEQWAPRMDSSLDC*SSSNLI
Trigger: AATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGA...ATCCATTCGAGGGGCCCATTGTTCAGACACTTGACAGATAGGAAGTCCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CCA 90 bp CCACATAATGACTTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGATCTGGATTAAGATaGATCCGACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PHNDFICLIPKLNAVSSEGSGLR*IRQGRG
Trigger: ACCACGACCCTGTCGGATCCATCTTAATCCAGATCC...CTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAAGTCATTATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629425.2
CDS-3UTR CCA 90 bp TCCCACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATAACCATTTGGAAGCCTaGGGAGTATATAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SHSDFRALKGVLTFMAFDNHLEA*GVYKLS
Trigger: TGAGAGCTTATATACTCCCCAGGCTTCCAAATGGTT...ATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CCA 90 bp TGCTCTGGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATTTGGAAGTAACCATTTaGAAGCCTGGGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: CSGCNGWILKGNPCCWWNLEVTI*KPGEYI
Trigger: TATATACTCCCCAGGCTTCCAAATGGTTACTTCCAA...ATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CCA 90 bp CTCGAATGCGAAAATTCTCCAGGTGTCTCTGACGTGATTCCTTTAGTATCTTCTAATCCTTGCTGTTGGTaGAATCAGCCCTCGTTCTAT +
Preference number: 4 (lower is better)
Translates to: LECENSPGVSDVIPLVSSNPCCW*NQPSFY
Trigger: ATAGAACGAGGGCTGATTCCACCAACAGCAAGGATT...AGAAGATACTAAAGGAATCACGTCAGAGACACCTGGAGAATTTTCGCATTCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CCA 90 bp CACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTAATCCTTGCTGTTGGTaGAATCAGCCCTCGTTCTAT +
Preference number: 4 (lower is better)
Translates to: HSDFRALKGVLTFMAFDLNPCCW*NQPSFY
Trigger: ATAGAACGAGGGCTGATTCCACCAACAGCAAGGATT...AAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CCA 90 bp CCACATAATGACTTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTAATCCTTGCTGTTaGTGGAATCAGCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: PHNDFICLIPKLNAVSSEGNPCC*WNQPSF
Trigger: GAACGAGGGCTGATTCCACCAACAGCAAGGATTACC...CTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAAGTCATTATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSRQLKL*KEGHQI
Trigger: AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp TTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAATTTGAATAAAACACATTTCCATGTGGCTTaGATCTTCATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSSCREHFPAETNLNKTHFHVA*IFMAAS
Trigger: GGAGGCCGCCATGAAGATCCAAGCCACATGGAAATG...TGTTTTATTCAAATTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGCTAAATCATCTCTGTaGAGGAGCCCGCTGACGATG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNAKSSL*RSPLTM
Trigger: CATCGTCAGCGGGCTCCTCCACAGAGATGATTTAGC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGCTCAGAGCCCAGGATaGGTATGTCTAACATATCGG +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSAQSPG*VCLTYR
Trigger: CCGATATGTTAGACATACCCATCCTGGGCTCTGAGC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATTTCTTCCTTTCCTTTaGAACAAAGCGGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILFLPFL*NKAGHF
Trigger: GAAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGTCATGAGGACCCCCTaGAGATCCTCGCCGATTGTT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIVMRTP*RSSPIV
Trigger: AACAATCGGCGAGGATCTCCAGGGGGTCCTCATGAC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AAACAGTGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACATCATGATGTCCTCTTaGCCTTCTGCTTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KQCTSNILAYWRNSNNTYIMMSS*PSAFPL
Trigger: AAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGAT...GTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATGTTCTGCTGTGTGTTaGAATCGGCAATATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILCSAVC*NRQYVL
Trigger: GAGAACATATTGCCGATTTCAACACACAGCAGAACA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCAAGGTTCCCAGATTTaGCGGCTGCATGTAGACTTA +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSQGSQI*RLHVDL
Trigger: TAAGTCTACATGCAGCCGTCAAATCTGGGAACCTTG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTCGATCACACCCCCTTaGCTGAGAAATGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNSITPP*LRNVWR
Trigger: CCTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATCGATCACACCCCCTTaGCTGAGAAATGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRSITPP*LRNVWR
Trigger: CCTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATGGTACCAGAGGAGATaGAGGGGCTTTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRWYQRR*RGFQHE
Trigger: TTCATGCTGAAAGCCCCTTCATCTCCTCTGGTACCA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTGGTACCAGAGGAGATaGAGGGGCTTTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNWYQRR*RGFQHE
Trigger: TTCATGCTGAAAGCCCCTTCATCTCCTCTGGTACCA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTGTCAGGTATAAGGTaGGTTGAGTCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNLSGIR*VESGPA
Trigger: AGCTGGCCCTGACTCAACTCACCTTATACCTGACAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATTGTCAGGTATAAGGTaGGTTGAGTCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRLSGIR*VESGPA
Trigger: AGCTGGCCCTGACTCAACTCACCTTATACCTGACAA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTGCCAGCATCGGCATTaGCAGCGCACTCATGCATTT +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNCQHRH*QRTHAF
Trigger: AAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGGTGCTGATATTTCTTaGTGGATGATGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILGADIS*WMMKRW
Trigger: CCATCTCTTCATCATCCATCAAGAAATATCAGCACC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGGCAGAGATGAACTGTaGTGTCTTTGGGGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRGRDEL*CLWGCQ
Trigger: TTGGCAACCCCAAAGACAGCACAGTTCATCTCTGCC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTGGCCCTTGTACCTTTaGCCTGGAAGATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSWPLYL*PGRFIS
Trigger: GCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGATGCTTGGCTCGAATaGGAAAATTCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSDAWLE*ENSPGV
Trigger: GACACCTGGAGAATTTTCGCATTCGAGCCAAGCATC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGCGATTCCAGTTGGCTaGCAGATGCTTGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNAIPVG*QMLGSN
Trigger: ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCAAAGCTGGCTCTTGTaGCCATTTCTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSQSWLL*PFLSPV
Trigger: GACTGGAGAAAGAAATGGGCACAAGAGCCAGCTTTG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGTTGGTGACATTGTCTaGAGGTGGGAATGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSVGDIV*RWECFD
Trigger: ATCGAAGCATTCCCACCTGCAGACAATGTCACCAAC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGGAGGTTAAGGCCGGTTaGCCACACCTGTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLEVKAG*PHLLFQ
Trigger: TTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTC...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGAGGTTAAGGCCGGTTaGCCACACCTGTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNEVKAG*PHLLFQ
Trigger: TTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTCAGCTGGTCACTATATaGGAGGTTAAGGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIQLVTI*EVKAGC
Trigger: GCAACCGGCCTTAACCTCGCATATAGTGACCAGCTG...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCCAGGGTGCTCAAACTaGAATCCAGATGGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIPGCSN*NPDGRL
Trigger: CAAACGGCCATCTGGATTGCAGTTTGAGCACCCTGG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCCAGGGTGCTCAAACTaGAATCCAGATGGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNPGCSN*NPDGRL
Trigger: CAAACGGCCATCTGGATTGCAGTTTGAGCACCCTGG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGGGGCACTTCCAGGGTaGTCAAACTGCAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIGALPG*SNCNPD
Trigger: ATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAAACCAGTGAGAGATTaGTGTGTCTTAGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSKPVRD*CVLAGW
Trigger: CCACCCAGCTAAGACACAGCAATCTCTCACTGGTTT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGATCCGACAGGGTCGTaGTTTTCAGTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNDPTGS*FSVFCA
Trigger: GGCACAGAACACTGAAAACCACGACCCTGTCGGATC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGGATCTGGATTAAGATaGATCCGACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRGSGLR*IRQGRG
Trigger: ACCACGACCCTGTCGGATCCATCTTAATCCAGATCC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp GTAGAACCAAAGAACTGGTATAATTCTACAGCAACTCACATCTTGCCAAAAAGAGGATCTGGATTAAGATaGATCCGACAGGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VEPKNWYNSTATHILPKRGSGLR*IRQGRG
Trigger: ACCACGACCCTGTCGGATCCATCTTAATCCAGATCC...TCTTTTTGGCAAGATGTGAGTTGCTGTAGAATTATACCAGTTCTTTGGTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILSGCNG*ILKGNP
Trigger: AGGATTACCTTTCAGAATCCACCCATTACACCCAGA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp CACAGTGATTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTGAAAGTGGCTACAGTTaGAATCTTACGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: HSDFRALKGVLTFMAFDLESGYS*NLTCFI
Trigger: GATGAAGCACGTAAGATTCCAACTGTAGCCACTTTC...AAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIHFCWR*RWFPRY
Trigger: ATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTG...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGAACTTCACTTCTGCTaGAGATGGAGGTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNELHFC*RWRWFP
Trigger: CGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCGTCAGCTCAAACTCTaGAAGGAGGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNRQLKL*KEGHQI
Trigger: AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTGGCTTGGATCTTCATaGCGGCCTCCGAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNWLGSS*RPPNFH
Trigger: ATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCATTTCCATGTGGCTTaGATCTTCATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIHFHVA*IFMAAS
Trigger: GGAGGCCGCCATGAAGATCCAAGCCACATGGAAATG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AAGCGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGATTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KRGSCVITLIMSRTFSCRFSRVL*QYNSQA
Trigger: TGCTTGGCTGTTATATTGCCATAAGACTCGACTAAA...TCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGACATTGTCTGCAGGTaGGAATGCTTCGATCACACC +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNDIVCR*ECFDHT
Trigger: GGTGTGATCGAAGCATTCCCACCTGCAGACAATGTC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CACAAATCTTCCTATCATGATGTCCTCTTGACCTTCTGCTTTTCCCCTTTGATCAAACTGCAATCCAGATaGCCGTTTGTCAGGTATAAG +
Preference number: 4 (lower is better)
Translates to: HKSSYHDVLLTFCFSPLIKLQSR*PFVRYK
Trigger: CTTATACCTGACAAACGGCCATCTGGATTGCAGTTT...GATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGATTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTCACTGCATAGCGACTaGTTGCCAGCATCGGCATTG +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLSLHSD*LPASAL
Trigger: CAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATGTGTCTTAGCTGGGTaGTCATCACTGCATAGCGAC +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRCVLAG*SSLHSD
Trigger: GTCGCTATGCAGTGATGACCACCCAGCTAAGACACA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCCAGACAATAGTGGCTTaGTATAACAAAAACACGATG +
Preference number: 4 (lower is better)
Translates to: SGYSWNLTCFIKTMQRSCQTIVA*YNKNTM
Trigger: CATCGTGTTTTTGTTATACCAAGCCACTATTGTCTG...GCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp ATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGTACCAGTTTACAGCAGCTCTGTaGTGGATGTTTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: IIKSNWNWMSVREHEQYQFTAAL*WMFSGS
Trigger: GGATCCTGAAAACATCCACCACAGAGCTGCTGTAAA...CTGGTACTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTACAAGGAGCCATAATGTaGTGGGTAATAGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLQGAIM*WVIEVA
Trigger: AGCAACCTCTATTACCCACCACATTATGGCTCCTTG...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp ATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGTACCAGCCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: IIKSNWNWMSVREHEQYQPLQSF*LLFQDS
Trigger: AGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGG...CTGGTACTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR TCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTACCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLPLQSF*LLFQDS
Trigger: AGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGG...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629425.2
CDS-3UTR TCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTAGTAATGGGTGGATTCTaGAAGGTAATCCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLVMGGF*KVILAV
Trigger: AACAGCAAGGATTACCTTTCAGAATCCACCCATTAC...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp TATAGTGAAAGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGATCATGATGTCCTCTTaGCCTTCTGCTTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: YSESGYSWNLTCFIKTMQIMMSS*PSAFPL
Trigger: AAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGAT...CTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACTTTCACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACATGGCCTTCCTATCATaGTGTCCTCTTGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNMAFLS*CPLDLL
Trigger: CAGAAGGTCAAGAGGACATCATGATAGGAAGGCCAT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR TCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTACTCTCAAAGGTGTTTTaGCTTTCATGGCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLLSKVF*LSWPSY
Trigger: ATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAG...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAATCAGCATTTGGACATaGGCTGGGTCCTCTAACACT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRISIWT*AGSSNT
Trigger: AGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGAT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CCACATAATGACTTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGTTCTCCAGGTGTCTCTaGCGTGATTCCTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: PHNDFICLIPKLNAVSSEFSRCL*RDSFSI
Trigger: GATACTAAAGGAATCACGTCAGAGACACCTGGAGAA...CTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAAGTCATTATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTCGATCACACCCCCTTaGCTGAGAAATGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLSITPP*LRNVWR
Trigger: CCTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAAGTCAGTGAGGGAACATaGACAGTACCAGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: MCCIIKSNWNWMSVREHEVSEGT*TVPGIS
Trigger: AGAAATCCCTGGTACTGTTCATGTTCCCTCACTGAC...TTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR GCA 90 bp AAGGTCATATCTGGTAAGTTTATTCGTCAGCTCAAACTCTGGAAGGAGGGCCACTTCAGTCCTTTTGATTaGTGTTTCAAGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KVISGKFIRQLKLWKEGHFSPFD*CFKTLN
Trigger: ATTCAGAGTCTTGAAACAGCAATCAAAAGGACTGAA...GTGGCCCTCCTTCCAGAGTTTGAGCTGACGAATAAACTTACCAGATATGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000561339.1
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATGGCCCTTGTACCTTTaGCCTGGAAGATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRWPLYL*PGRFIS
Trigger: GCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp TTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAATTTGAATAAAACATGGCCCTTGTACCTTTaGCCTGGAAGATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: LLSSCREHFPAETNLNKTWPLYL*PGRFIS
Trigger: GCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCA...TGTTTTATTCAAATTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGATGCTTGGCTCGAATaGGAAAATTCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRDAWLE*ENSPGV
Trigger: GACACCTGGAGAATTTTCGCATTCGAGCCAAGCATC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGATGCTTGGCTCGAATaGGAAAATTCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNDAWLE*ENSPGV
Trigger: GACACCTGGAGAATTTTCGCATTCGAGCCAAGCATC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp TTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAATTTGAATAAAACAGATGCTTGGCTCGAATaGGAAAATTCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LLSSCREHFPAETNLNKTDAWLE*ENSPGV
Trigger: GACACCTGGAGAATTTTCGCATTCGAGCCAAGCATC...TGTTTTATTCAAATTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCCCAGCTGCATGTTCTaGTGTGTGTTGAAATCGGCA +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNPSCMF*CVLKSA
Trigger: TGCCGATTTCAACACACAGCAGAACATGCAGCTGGG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCAAAGCTGGCTCTTGTaGCCATTTCTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNQSWLL*PFLSPV
Trigger: GACTGGAGAAAGAAATGGGCACAAGAGCCAGCTTTG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGTTGGTGACATTGTCTaGAGGTGGGAATGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNVGDIV*RWECFD
Trigger: ATCGAAGCATTCCCACCTGCAGACAATGTCACCAAC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAAAACCAGTGAGAGATTaGTGTGTCTTAGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRKPVRD*CVLAGW
Trigger: CCACCCAGCTAAGACACAGCAATCTCTCACTGGTTT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCAACATCATAGCCAATaGCATGGGCCCTACAGATCT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNQHHSQ*HGPYRS
Trigger: AGATCTGTAGGGCCCATGGCATTGGCTATGATGTTG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp GATTGTTCTCAACATCATAGCCAATGCCATGGGCCCTACAGATCTGGAGAAAAATCATCTTTGGACTGTTaGTCCTCTTCAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: DCSQHHSQCHGPYRSGEKSSLDC*SSSNLI
Trigger: AATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGA...TTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAGAACAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp GTAGAACCAAAGAACTGGTATAATTCTACAGCAACTCACATCTTGCCAAAAAGACCCTATCTTTCGCTTTaGTCTTGGAAAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VEPKNWYNSTATHILPKRPYLSL*SWKDRQ
Trigger: CTGCCTGTCTTTCCAAGAGCAAAGCGAAAGATAGGG...TCTTTTTGGCAAGATGTGAGTTGCTGTAGAATTATACCAGTTCTTTGGTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTAAGGTCTTCATGGATCTaGATTAAGATGGATCCGACA +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLRSSWI*IKMDPT
Trigger: TGTCGGATCCATCTTAATCCAGATCCATGAAGACCT...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629425.2
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATTGGAAGTAACCATTTaGAAGCCTGGGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILLEVTI*KPGEYI
Trigger: TATATACTCCCCAGGCTTCCAAATGGTTACTTCCAA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTGTGCAATGAGAAGATaGCAGAACCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNCAMRR*QNREAG
Trigger: TCCAGCCTCACGGTTCTGCCATCTTCTCATTGCACA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGGTAATCCTTGCTGTTaGTGGAATCAGCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIGNPCC*WNQPSF
Trigger: GAACGAGGGCTGATTCCACCAACAGCAAGGATTACC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTATCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLSGCNG*ILKGNP
Trigger: AGGATTACCTTTCAGAATCCACCCATTACACCCAGA...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTAGAAAGTGGCTACAGTTaGAATCTTACGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLESGYS*NLTCFI
Trigger: GATGAAGCACGTAAGATTCCAACTGTAGCCACTTTC...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTGCTGGAGATGGAGGTaGTTCCCGAGGTATAGTGAA +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPICWRWR*FPRYSE
Trigger: TTCACTATACCTCGGGAACCACCTCCATCTCCAGCA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTGGCTTGGATCTTCATaGCGGCCTCCGAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLWLGSS*RPPNFH
Trigger: ATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAATAACAGCCAAGCAATaGCAATCACACCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRITAKQ*QSHLMP
Trigger: GGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTAT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTGTACATCAGGTGAGTaGCCAGGCACATATGATGCT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNCTSGE*PGTYDA
Trigger: AGCATCATATGTGCCTGGCCACTCACCTGATGTACA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGATCTTCACCAAAGCTaGCTCTTGTGCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSDLHQS*LLCPFL
Trigger: AAGAAATGGGCACAAGAGCCAGCTTTGGTGAAGATC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGACATTGTCTGCAGGTaGGAATGCTTCGATCACACC +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIDIVCR*ECFDHT
Trigger: GGTGTGATCGAAGCATTCCCACCTGCAGACAATGTC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGACATTGTCTGCAGGTaGGAATGCTTCGATCACACC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNDIVCR*ECFDHT
Trigger: GGTGTGATCGAAGCATTCCCACCTGCAGACAATGTC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTGGATGATGAAGAGATaGCGAGCAAAGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNWMMKR*RAKVMR
Trigger: CCTCATGACCTTTGCTCGCCATCTCTTCATCATCCA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AAGGTCATATCTGGTAAGTTTATTCGTCAGCTCAAACTCTGGAAGGAGGGCCACCAAACCAATTTCCCCTaGCTTTTATTTCTAACAGAA +
Preference number: 4 (lower is better)
Translates to: KVISGKFIRQLKLWKEGHQTNFP*LLFLTE
Trigger: TTCTGTTAGAAATAAAAGCCAGGGGAAATTGGTTTG...GTGGCCCTCCTTCCAGAGTTTGAGCTGACGAATAAACTTACCAGATATGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp TTTGCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAATGCAGAAGATCGATaGACTATTAGAAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: FALEDLSAFGHELGPLTLNAEDR*TIRNRR
Trigger: TCTCCTATTTCTAATAGTCCATCGATCTTCTGCATT...CAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGCTGTTTCAAGACTCTaGATGTCTAGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRAVSRL*MSRVSP
Trigger: AGGAGAGACTCTAGACATTCAGAGTCTTGAAACAGC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACATCATGATGTCCTCTTaGCCTTCTGCTTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNIMMSS*PSAFPL
Trigger: AAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGAT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR TCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTGTCATAATCCCACAGTaGTTTCAGGGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIVIIPQ*FQGSQR
Trigger: CCTTTGAGAGCCCTGAAATCACTGTGGGATTATGAC...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATATCAGCATTTGGACATaGGCTGGGTCCTCTAACACT +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNISIWT*AGSSNT
Trigger: AGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGAT...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTCTCCAGGTGTCTCTaGCGTGATTCCTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNFSRCL*RDSFSI
Trigger: GATACTAAAGGAATCACGTCAGAGACACCTGGAGAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATTCTCCAGGTGTCTCTaGCGTGATTCCTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRFSRCL*RDSFSI
Trigger: GATACTAAAGGAATCACGTCAGAGACACCTGGAGAA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCAAGGTTCCCAGATTTaGCGGCTGCATGTAGACTTA +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNQGSQI*RLHVDL
Trigger: TAAGTCTACATGCAGCCGTCAAATCTGGGAACCTTG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATCACACCCCCTTGACTaGGAAATGTTTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRSHPLD*EMFGGI
Trigger: AATTCCTCCAAACATTTCTCAGTCAAGGGGGTGTGA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp TATAGTGAAAGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGCAAATCTTCCTATCATaGTGTCCTCTTGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: YSESGYSWNLTCFIKTMQQIFLS*CPLDLL
Trigger: CAGAAGGTCAAGAGGACATCATGATAGGAAGATTTG...CTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACTTTCACTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGATGCTTGGCTCGAATaGGAAAATTCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNDAWLE*ENSPGV
Trigger: GACACCTGGAGAATTTTCGCATTCGAGCCAAGCATC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACATTTTGAACCTGTCCTaGAGGTCACTTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNILNLS*RSLLSS
Trigger: TGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAAT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAATTTTGAACCTGTCCTaGAGGTCACTTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRILNLS*RSLLSS
Trigger: TGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAAT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTATTCCAGGAGGAACTaGCACATTGGCACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNYSRRN*HIGTVK
Trigger: TTTGACAGTGCCAATGTGGCAGTTCCTCCTGGAATA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCTTCAAGGCCATATCTaGTACTCTCCTTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPILQGHI*YSPLAP
Trigger: GGGTGCTAAAGGAGAGTAGCAGATATGGCCTTGAAG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTCTTCAAGGCCATATCTaGTACTCTCCTTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIILQGHI*YSPLAP
Trigger: GGGTGCTAAAGGAGAGTAGCAGATATGGCCTTGAAG...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCAAAGCTGGCTCTTGTaGCCATTTCTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNQSWLL*PFLSPV
Trigger: GACTGGAGAAAGAAATGGGCACAAGAGCCAGCTTTG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGTTGGTGACATTGTCTaGAGGTGGGAATGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNVGDIV*RWECFD
Trigger: ATCGAAGCATTCCCACCTGCAGACAATGTCACCAAC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGTTGGTGACATTGTCTaGAGGTGGGAATGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIVGDIV*RWECFD
Trigger: ATCGAAGCATTCCCACCTGCAGACAATGTCACCAAC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCAACATCATAGCCAATaGCATGGGCCCTACAGATCT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIQHHSQ*HGPYRS
Trigger: AGATCTGTAGGGCCCATGGCATTGGCTATGATGTTG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTCAACATCATAGCCAATaGCATGGGCCCTACAGATCT +
Preference number: 4 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLQHHSQ*HGPYRS
Trigger: AGATCTGTAGGGCCCATGGCATTGGCTATGATGTTG...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAAAATTGGTCTCGCCTTaGATATTAGGTGCTGATATT +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILKLVSP*ILGADI
Trigger: AATATCAGCACCTAATATGCAAGGCGAGACCAATTT...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATCATCTTTGGACTGTTaGTCCTCTTCAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILSSLDC*SSSNLI
Trigger: AATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAACCATTTGGAAGCCTaGGGAGTATATAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSNHLEA*GVYKLS
Trigger: TGAGAGCTTATATACTCCCCAGGCTTCCAAATGGTT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp TATAGTGAAAGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGTCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: YSESGYSWNLTCFIKTMQSGCNG*ILKGNP
Trigger: AGGATTACCTTTCAGAATCCACCCATTACACCCAGA...CTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACTTTCACTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
CDS-3UTR CCA 90 bp CCACATAATGACTTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGTCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: PHNDFICLIPKLNAVSSESGCNG*ILKGNP
Trigger: AGGATTACCTTTCAGAATCCACCCATTACACCCAGA...CTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAAGTCATTATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNCSISM*LGSSWR
Trigger: CCGCCATGAAGATCCAAGCCACATGGAAATGCTACA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGG +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLCSISM*LGSSWR
Trigger: CCGCCATGAAGATCCAAGCCACATGGAAATGCTACA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTGTAGCATTTCCATGTaGCTTGGATCTTCATGGCGG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPICSISM*LGSSWR
Trigger: CCGCCATGAAGATCCAAGCCACATGGAAATGCTACA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTATAACAGCCAAGCAATaGCAATCACACCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIITAKQ*QSHLMP
Trigger: GGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTAT...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTATAACAGCCAAGCAATaGCAATCACACCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIITAKQ*QSHLMP
Trigger: GGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTAT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTGGCTGCCAGATGCTTaGCTCGAATGCGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIWLPDA*LECENS
Trigger: AGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTGGCTGCCAGATGCTTaGCTCGAATGCGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLWLPDA*LECENS
Trigger: AGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTGTTCTCTCACAGGCTaGGAATACCCTAATGATGGG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPICSLTG*EYPNDG
Trigger: CCCATCATTAGGGTATTCCCAGCCTGTGAGAGAACA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTGTTCTCTCACAGGCTaGGAATACCCTAATGATGGG +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIICSLTG*EYPNDG
Trigger: CCCATCATTAGGGTATTCCCAGCCTGTGAGAGAACA...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGTTTGCCTCCAGATTTaGTACTATAAAGATGAGCTA +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILVCLQI*YYKDEL
Trigger: TAGCTCATCTTTATAGTACCAAATCTGGAGGCAAAC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGATCTTCACCAAAGCTaGCTCTTGTGCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRDLHQS*LLCPFL
Trigger: AAGAAATGGGCACAAGAGCCAGCTTTGGTGAAGATC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTTCTTCCTTTCCTTTaGAACAAAGCGGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNFLPFL*NKAGHF
Trigger: GAAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTGGATGATGAAGAGATaGCGAGCAAAGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIWMMKR*RAKVMR
Trigger: CCTCATGACCTTTGCTCGCCATCTCTTCATCATCCA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTGGATGATGAAGAGATaGCGAGCAAAGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNWMMKR*RAKVMR
Trigger: CCTCATGACCTTTGCTCGCCATCTCTTCATCATCCA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACAGACAATAGTGGCTTaGTATAACAAAAACACGATG +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILQTIVA*YNKNTM
Trigger: CATCGTGTTTTTGTTATACCAAGCCACTATTGTCTG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp TTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGGGTCCTGTGTTAAATATCCTGGCTTATTaGCGTAACAGCAACAACACA +
Preference number: 4 (lower is better)
Translates to: FICLIPKLNAVSSEGPVLNILAY*RNSNNT
Trigger: TGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATT...TAACACAGGACCCTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp TTCTTAATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAAGCTGTTTCAAGACTCTaGATGTCTAGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FLMCCIIKSNWNWMSVREAVSRL*MSRVSP
Trigger: AGGAGAGACTCTAGACATTCAGAGTCTTGAAACAGC...TTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACATTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGTAATGGGTGGATTCTaGAAGGTAATCCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRVMGGF*KVILAV
Trigger: AACAGCAAGGATTACCTTTCAGAATCCACCCATTAC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACTCTCAAAGGTGTTTTaGCTTTCATGGCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRLSKVF*LSWPSY
Trigger: ATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTTCTCCAGGTGTCTCTaGCGTGATTCCTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNFSRCL*RDSFSI
Trigger: GATACTAAAGGAATCACGTCAGAGACACCTGGAGAA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATGTTCTGCTGTGTGTTaGAATCGGCAATATGTTCTC +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRCSAVC*NRQYVL
Trigger: GAGAACATATTGCCGATTTCAACACACAGCAGAACA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTCACACCCCCTTGACTaGGAAATGTTTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPISHPLD*EMFGGI
Trigger: AATTCCTCCAAACATTTCTCAGTCAAGGGGGTGTGA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGGTGCTGATATTTCTTaGTGGATGATGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNGADIS*WMMKRW
Trigger: CCATCTCTTCATCATCCATCAAGAAATATCAGCACC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp ATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAAGTTTCCACATACCTTTaGGGACCTAACATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: MCCIIKSNWNWMSVREHEVSTYL*GPNMLF
Trigger: GAAAAGCATGTTAGGTCCTCAAAGGTATGTGGAAAC...TTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAGGAATATCACAAAATaGAGTCCCATTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSRNITK*SPISSE
Trigger: TTCCGAGGAAATGGGACTGCATTTTGTGATATTCCT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp TGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGTTGGAAGTAACCATTTaGAAGCCTGGGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: CCIIKSNWNWMSVREHEQLEVTI*KPGEYI
Trigger: TATATACTCCCCAGGCTTCCAAATGGTTACTTCCAA...CTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGAATCCTTGCTGTTGGTaGAATCAGCCCTCGTTCTAT +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLNPCCW*NQPSFY
Trigger: ATAGAACGAGGGCTGATTCCACCAACAGCAAGGATT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATCTGGGTGTAATGGGTaGATTCTGAAAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRSGCNG*ILKGNP
Trigger: AGGATTACCTTTCAGAATCCACCCATTACACCCAGA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGAAAGTGGCTACAGTTaGAATCTTACGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRESGYS*NLTCFI
Trigger: GATGAAGCACGTAAGATTCCAACTGTAGCCACTTTC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGAAAGTGGCTACAGTTaGAATCTTACGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNESGYS*NLTCFI
Trigger: GATGAAGCACGTAAGATTCCAACTGTAGCCACTTTC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp CTCAGCTGCTCTATCATAGGGAAGATGTTTACAGCTTCAGGTGTGATAATTTTGTTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LSCSIIGKMFTASGVIILFSRVL*QYNSQA
Trigger: TGCTTGGCTGTTATATTGCCATAAGACTCGACTAAA...CAAAATTATCACACCTGAAGCTGTAAACATCTTCCCTATGATAGAGCAGCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACCTAATGATGGGATATaGATAATAGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRPNDGI*IIVLLE
Trigger: CTCCAGGAGGACTATTATCCATATCCCATCATTAGG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGATCTTCACCAAAGCTaGCTCTTGTGCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIDLHQS*LLCPFL
Trigger: AAGAAATGGGCACAAGAGCCAGCTTTGGTGAAGATC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGATCTTCACCAAAGCTaGCTCTTGTGCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNDLHQS*LLCPFL
Trigger: AAGAAATGGGCACAAGAGCCAGCTTTGGTGAAGATC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACAAACTGCAATCCAGATaGCCGTTTGTCAGGTATAAG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNKLQSR*PFVRYK
Trigger: CTTATACCTGACAAACGGCCATCTGGATTGCAGTTT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAAAACTGCAATCCAGATaGCCGTTTGTCAGGTATAAG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRKLQSR*PFVRYK
Trigger: CTTATACCTGACAAACGGCCATCTGGATTGCAGTTT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAAATGCAGAAGATCGATaGACTATTAGAAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: LPPRYILMLWLTRCWLILNAEDR*TIRNRR
Trigger: TCTCCTATTTCTAATAGTCCATCGATCTTCTGCATT...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp TTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAATTTGAATAAAACAGTACAAGCAATATCCTaGCTTATTGGCGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: LLSSCREHFPAETNLNKTVQAIS*LIGVTA
Trigger: TGCTGTTACGCCAATAAGCCAGGATATTGCTTGTAC...TGTTTTATTCAAATTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNPLQSF*LLFQDS
Trigger: AGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTGTTCTGCTGTGTGTTaGAATCGGCAATATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNCSAVC*NRQYVL
Trigger: GAGAACATATTGCCGATTTCAACACACAGCAGAACA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTGGTGCTGATATTTCTTaGTGGATGATGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIGADIS*WMMKRW
Trigger: CCATCTCTTCATCATCCATCAAGAAATATCAGCACC...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR GCA 90 bp TTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTTGTTTCTTGTTCAGTCCTTTTGATTaGTGTTTCAAGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: FRALKGVLTFMAFDLCFLFSPFD*CFKTLN
Trigger: ATTCAGAGTCTTGAAACAGCAATCAAAAGGACTGAA...CAAGAAACAAAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACAGGAATATCACAAAATaGAGTCCCATTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNRNITK*SPISSE
Trigger: TTCCGAGGAAATGGGACTGCATTTTGTGATATTCCT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTGACAGCGCACTCATaGATTTGGTTTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNLTAHS*IWFSSF
Trigger: AAAGGAAGAAAACCAAATGCATGAGTGCGCTGTCAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAAATTGGTCTCGCCTTaGATATTAGGTGCTGATATT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSKLVSP*ILGADI
Trigger: AATATCAGCACCTAATATGCAAGGCGAGACCAATTT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTCATCTTTGGACTGTTaGTCCTCTTCAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSSSLDC*SSSNLI
Trigger: AATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGAGGTCTTCATGGATCTaGATTAAGATGGATCCGACA +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLRSSWI*IKMDPT
Trigger: TGTCGGATCCATCTTAATCCAGATCCATGAAGACCT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp GATTTCTTAATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGAGGTCTTCATGGATCTaGATTAAGATGGATCCGACA +
Preference number: 4 (lower is better)
Translates to: DFLMCCIIKSNWNWMSVRRSSWI*IKMDPT
Trigger: TGTCGGATCCATCTTAATCCAGATCCATGAAGACCT...CCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACATTAAGAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp TTCTTAATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAAAACCATTTGGAAGCCTaGGGAGTATATAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FLMCCIIKSNWNWMSVRENHLEA*GVYKLS
Trigger: TGAGAGCTTATATACTCCCCAGGCTTCCAAATGGTT...TTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACATTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCTTAAAATCCCTTTGTaGGCATCTGCTTGTAAGACT +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNLKIPL*ASACKT
Trigger: AGTCTTACAAGCAGATGCCCACAAAGGGATTTTAAG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSFSRVL*QYNSQA
Trigger: TGCTTGGCTGTTATATTGCCATAAGACTCGACTAAA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTCCTAATGATGGGATATaGATAATAGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLPNDGI*IIVLLE
Trigger: CTCCAGGAGGACTATTATCCATATCCCATCATTAGG...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCCTAATGATGGGATATaGATAATAGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIPNDGI*IIVLLE
Trigger: CTCCAGGAGGACTATTATCCATATCCCATCATTAGG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATAAACTGCAATCCAGATaGCCGTTTGTCAGGTATAAG +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNKLQSR*PFVRYK
Trigger: CTTATACCTGACAAACGGCCATCTGGATTGCAGTTT...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp TATAGTGAAAGTGGCTACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGTTCAGTCCTTTTGATTaGTGTTTCAAGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: YSESGYSWNLTCFIKTMQFSPFD*CFKTLN
Trigger: ATTCAGAGTCTTGAAACAGCAATCAAAAGGACTGAA...CTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACTTTCACTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000535744.5
CDS-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTGTCAAAGACACGTTTaGCTCCAGATTTGGTACTAT +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLCQRHV*LQIWYY
Trigger: ATAGTACCAAATCTGGAGGCAAACGTGTCTTTGACA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR GCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTAGGAATATCACAAAATaGAGTCCCATTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIRNITK*SPISSE
Trigger: TTCCGAGGAAATGGGACTGCATTTTGTGATATTCCT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTTTGACAGCGCACTCATaGATTTGGTTTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLLTAHS*IWFSSF
Trigger: AAAGGAAGAAAACCAAATGCATGAGTGCGCTGTCAA...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTTGACAGCGCACTCATaGATTTGGTTTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLLTAHS*IWFSSF
Trigger: AAAGGAAGAAAACCAAATGCATGAGTGCGCTGTCAA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATCATCTTTGGACTGTTaGTCCTCTTCAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRSSLDC*SSSNLI
Trigger: AATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCAAACCAATTTCCCCTaGCTTTTATTTCTAACAGAA +
Preference number: 4 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSQTNFP*LLFLTE
Trigger: TTCTGTTAGAAATAAAAGCCAGGGGAAATTGGTTTG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCAGACAATAGTGGCTTaGTATAACAAAAACACGATG +
Preference number: 4 (lower is better)
Translates to: RIQMFIQATELELHSILNQTIVA*YNKNTM
Trigger: CATCGTGTTTTTGTTATACCAAGCCACTATTGTCTG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTGGACAATTATGAAGTaGATGCTGAAAGTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLWTIMK*MLKVRV
Trigger: GACTCTAACTTTCAGCATTCACTTCATAATTGTCCA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR TCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTGGACAATTATGAAGTaGATGCTGAAAGTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIWTIMK*MLKVRV
Trigger: GACTCTAACTTTCAGCATTCACTTCATAATTGTCCA...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR TCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTGGACAATTATGAAGTaGATGCTGAAAGTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNWTIMK*MLKVRV
Trigger: GACTCTAACTTTCAGCATTCACTTCATAATTGTCCA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR GCA 90 bp GTAGAACCAAAGAACTGGTATAATTCTACAGCAACTCACATCTTGCCAAAAAGATTCAGTCCTTTTGATTaGTGTTTCAAGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VEPKNWYNSTATHILPKRFSPFD*CFKTLN
Trigger: ATTCAGAGTCTTGAAACAGCAATCAAAAGGACTGAA...TCTTTTTGGCAAGATGTGAGTTGCTGTAGAATTATACCAGTTCTTTGGTTCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR GCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATTTTATTCTTTTGATTaGCTTGGGACTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRFYSFD*LGTVHQ
Trigger: CTGATGTACAGTCCCAAGGCAATCAAAAGAATAAAA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR GCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATAAATTGGTCTCGCCTTaGATATTAGGTGCTGATATT +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNKLVSP*ILGADI
Trigger: AATATCAGCACCTAATATGCAAGGCGAGACCAATTT...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNFSRVL*QYNSQA
Trigger: TGCTTGGCTGTTATATTGCCATAAGACTCGACTAAA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTTTAGTCGAGTCTTATaGCAATATAACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIFSRVL*QYNSQA
Trigger: TGCTTGGCTGTTATATTGCCATAAGACTCGACTAAA...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CCA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACAAACCAATTTCCCCTaGCTTTTATTTCTAACAGAA +
Preference number: 4 (lower is better)
Translates to: TNVYSSYRARATLHLKLRQTNFP*LLFLTE
Trigger: TTCTGTTAGAAATAAAAGCCAGGGGAAATTGGTTTG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CCA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTCAGACAATAGTGGCTTaGTATAACAAAAACACGATG +
Preference number: 4 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLQTIVA*YNKNTM
Trigger: CATCGTGTTTTTGTTATACCAAGCCACTATTGTCTG...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CCA 90 bp GATTTCTTAATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGATTATAAAGTCTAACTaGAACTGGATGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: DFLMCCIIKSNWNWMSVRIIKSN*NWMSVR
Trigger: CCTCACTGACATCCAGTTCCAGTTAGACTTTATAAT...CCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACATTAAGAAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
3UTR CAA 72 bp AAAAATTGCCCTTTTTATTCCAGACTGGGATCCAAATaGTTATGTACTGTATTCCAGGATCATTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KNCPFYSRLGSK*LCTVFQDHFLG
Trigger: ACCCAAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAGGGCAATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR GCA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTTCAGTCCTTTTGATTaGTGTTTCAAGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLFSPFD*CFKTLN
Trigger: ATTCAGAGTCTTGAAACAGCAATCAAAAGGACTGAA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CCA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTAATGCAGAAGATCGATaGACTATTAGAAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: HFIIICSDSPPSTQSKPINAEDR*TIRNRR
Trigger: TCTCCTATTTCTAATAGTCCATCGATCTTCTGCATT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS CCA 90 bp TACAGGGTAAGTCACCGGGAGTGTGCTGGGCCGTGGGGGAAGGTCTaGGTGGGCATTTTTGGGAGCCTCTCGCGAGTTGGAGGGAGTCTA +
Preference number: 5 (lower is better)
Translates to: YRVSHRECAGPWGKV*VGIFGSLSRVGGSL
Trigger: TAGACTCCCTCCAACTCGCGAGAGGCTCCCAAAAATGCCCACCCAGACCTTCCCCCACGGCCCAGCACACTCCCGGTGACTTACCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560497.1
CDS CCA 90 bp TTAAGATGGATCCGACAGGGTCGTGGTTTTCAGTGTTCTGTGCCATaGCTAGGTCAGGGAACGGCTACCTCCGCGGAGGCGCGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: LRWIRQGRGFQCSVP*LGQGTATSAEARFP
Trigger: TGGAAACCGCGCCTCCGCGGAGGTAGCCGTTCCCTGACCTAGCCATGGCACAGAACACTGAAAACCACGACCCTGTCGGATCCATCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335894.9
ENST00000512104.5
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp AACCTGTCCTGCAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTGACGGCTGCACTGATGCGATTCCAGTaGGCTGCCAGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: NLSCRSLLSSRFPDLTAALMRFQ*AARCLA
Trigger: AGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAG...TGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp CTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAACAAGGGGCCTTCCTaGAACTCAATCAAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LEVLMRFQLAARCLARMRNKGPS*NSIKEP
Trigger: TGGCTCCTTGATTGAGTTCAAGGAAGGCCCCTTGTT...TCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR CAA 90 bp GTGGCTTGGATCTTCATGGCGGCCTCCGAATTTCCATCTTGGCCCTTGTACCTTCTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: VAWIFMAASEFPSWPLYLLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...AAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp GAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAAGTGAGGTTGGTGACATaGTCTGCAGGTGGGAATGCT +
Preference number: 5 (lower is better)
Translates to: EVLMRFQLAARCLARMRKVRLVT*SAGGNA
Trigger: AGCATTCCCACCTGCAGACAATGTCACCAACCTCAC...TTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp CTGGTCACTATATGCGAGGTTAAGGCCGGTTGCCCACACCTGTTGTTCCAAGGTTTGGCTGCCAGATGCTaGGCTCGAATGCGAAAATTC +
Preference number: 5 (lower is better)
Translates to: LVTICEVKAGCPHLLFQGLAARC*ARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAA...ACCTTGGAACAACAGGTGTGGGCAACCGGCCTTAACCTCGCATATAGTGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp GCATCTAAGATGTCACACAGCCTCCCCAGCTGCATGTTCTGCTGTGTGTTGAAAGGGAACCGTTTCTCATaGACTGGCTGTGCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: ASKMSHSLPSCMFCCVLKGNRFS*TGCACC
Trigger: ACAGCACGCACAGCCAGTCAATGAGAAACGGTTCCC...TTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp CGACTGGTTGCCAGCATCGGCATTGACAGCGCACTCATGCATTTGGTTTTCTTCACGCTGATTTTCCCGTaGGGCTCTATCAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: RLVASIGIDSALMHLVFFTLIFP*GSISMS
Trigger: GGACATGCTGATAGAGCCCAACGGGAAAATCAGCGT...GAAGAAAACCAAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAACCAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp TGGCTGCCAGATGCTTGGCTCGAATGCGAAAATTCTCCAGGTGTCTCTGACGTGTTGGCCCTTGTACCTTaGCCCTGGAAGATTTATCAG +
Preference number: 5 (lower is better)
Translates to: WLPDAWLECENSPGVSDVLALVP*PWKIYQ
Trigger: CTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAA...CACGTCAGAGACACCTGGAGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp AACCTGTCCTGCAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTGACGGCTGCATCAAGGTTCCCAGATTaGACGGCTGCATGTAGACTT +
Preference number: 5 (lower is better)
Translates to: NLSCRSLLSSRFPDLTAASRFPD*TAACRL
Trigger: AAGTCTACATGCAGCCGTCAAATCTGGGAACCTTGA...TGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp TTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAATTCTCCAGGTGTCTCCACCAAAGCTGGCTCTaGTGCCCATTTCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: FQLAARCLARMRKFSRCLHQSWL*CPFLSP
Trigger: TGGAGAAAGAAATGGGCACAAGAGCCAGCTTTGGTG...GAGACACCTGGAGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp TTTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGACACAGCATTTCCTTTaGCTCAGGCGCCCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: FVSWERTSLLLEMEVVPETQHFL*LRRPRC
Trigger: GCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTGT...CTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR CAA 90 bp CCTCCCCAGCTGCATGTTCTGCTGTGTGTTGAAATCGGCAATATGTTCTCTCACTTTCCATCTTGGCCCTaGTACCTTTGCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PPQLHVLLCVEIGNMFSHFPSWP*YLCPGR
Trigger: TCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAA...GTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp GTCTGGTTTCTTCTTAGGAACATATCTGGGGCTGTCCCAGGTGGATTAGGATCATTGCCAGCATCGGCATaGACAGCGCACTCATGCATT +
Preference number: 5 (lower is better)
Translates to: VWFLLRNISGAVPGGLGSLPASA*TAHSCI
Trigger: AATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAA...TGATCCTAATCCACCTGGGACAGCCCCAGATATGTTCCTAAGAAGAAACCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp GAATGCTTCGATCACACCCCCTTGACTGAGAAATGTTTGGAGGAATTTCCTCCACTGCATAGCGACTGGTaGCCAGCATCGGCATTGACA +
Preference number: 5 (lower is better)
Translates to: ECFDHTPLTEKCLEEFPPLHSDW*PASALT
Trigger: TGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAG...TGGAGGAAATTCCTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGAAGCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp TTCCAGTTGGCTGCCAGATGCTTGGCTCGAATGCGAAAATTCTCCAGGTGTCTCCCTGCCGAGACCAATTaGAATAAAACAAGGGGCCTT +
Preference number: 5 (lower is better)
Translates to: FQLAARCLARMRKFSRCLPAETN*NKTRGL
Trigger: AAGGCCCCTTGTTTTATTCAAATTGGTCTCGGCAGG...GAGACACCTGGAGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS GCA 90 bp TTGTTGCCATCTCCAGCTGTCAAGCAGTCACCCATACTCTTGCCCTaGAGCAAAAGGAAGGGACATCAGGTGACAGACCCTAAATTTCAA +
Preference number: 5 (lower is better)
Translates to: LLPSPAVKQSPILLP*SKRKGHQVTDPKFQ
Trigger: TTGAAATTTAGGGTCTGTCACCTGATGTCCCTTCCTTTTGCTGCAGGGCAAGAGTATGGGTGACTGCTTGACAGCTGGAGATGGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559172.1
CDS-3UTR CAA 90 bp TTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATATTTCCATCTTGGCCCTaGTACCTTTGCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: FLGKNFTSAGDGGGSRGIFPSWP*YLCPGR
Trigger: TCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAA...TATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp CCTCCTGGAGGTCCTGATGCGATTCCAGTTGGCTGCCAGATGCTTGGCTCGAATAGAGGAAGAATTTTCTaGCTTTGTAGCATTTCCATG +
Preference number: 5 (lower is better)
Translates to: PPGGPDAIPVGCQMLGSNRGRIF*LCSISM
Trigger: CATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCT...ATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp TTTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGTTGGCTGCCAGATGCTaGGCTCGAATGCGAAAATTC +
Preference number: 5 (lower is better)
Translates to: FVSWERTSLLLEMEVVPELAARC*ARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAA...CTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp AACCTGTCCTGCAGGTCACTTCTGTCCTCAAGGTTCCCAGATTTGACGGCTGCATTGACTGAGAAATGTTaGGAGGAATTTCCTCCACGT +
Preference number: 5 (lower is better)
Translates to: NLSCRSLLSSRFPDLTAALTEKC*EEFPPR
Trigger: ACGTGGAGGAAATTCCTCCAAACATTTCTCAGTCAA...TGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp GCATCTAAGATGTCACACAGCCTCCCCAGCTGCATGTTCTGCTGTGTGTTGAAATTCGATCACACCCCCTaGACTGAGAAATGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: ASKMSHSLPSCMFCCVLKFDHTP*TEKCLE
Trigger: CTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGAA...TTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCTTTTCTTCCTTTCCTTaGGAACAAAGCGGGGCACTT +
Preference number: 5 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIFSSFP*EQSGAL
Trigger: AAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAAA...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp CTCTGGCTTCAGTCGAGGCGCGGCTCTAATGGGCATGTAGGACTTCCTATCTGTATGGTGGTCTTAAAATaGGTCTCGCCTTGCATATTA +
Preference number: 5 (lower is better)
Translates to: LWLQSRRGSNGHVGLPICMVVLK*VSPCIL
Trigger: TAATATGCAAGGCGAGACCAATTTTAAGACCACCAT...ACAGATAGGAAGTCCTACATGCCCATTAGAGCCGCGCCTCGACTGAAGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CAA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIALKGV*TFMAFV
Trigger: GACAAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp GTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGACACAGCATTTCCTTTaGCTCAGGCGCCCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: VQAISWLIGVTATTHTSLTQHFL*LRRPRC
Trigger: GCACCTAGGGCGCCTGAGCAAAAGGAAATGCTGTGT...CAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS GCA 90 bp GACAGACCCAATGTAACAAGTGCAAGGACAGAGATAGGAGAGGGCTaGTTTGGGAGTTCACAGGAGCCTGAACTGATATTTTACATGCAG +
Preference number: 5 (lower is better)
Translates to: DRPNVTSARTEIGEG*FGSSQEPELIFYMQ
Trigger: CTGCATGTAAAATATCAGTTCAGGCTCCTGTGAACTCCCAAAGCAGCCCTCTCCTATCTCTGTCCTTGCACTTGTTACATTGGGTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS CCA 90 bp AATCTCCACCAATGCTGCCAAGGCCTCCCCTTTCCAGTCATTTCCTaGATCTGGGAGAGATTGAGTCTGATACCTTTAAACGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: NLHQCCQGLPFPVIS*IWERLSLIPLNDFA
Trigger: AGCAAAGTCGTTTAAAGGTATCAGACTCAATCTCTCCCAGATCCAGGAAATGACTGGAAAGGGGAGGCCTTGGCAGCATTGGTGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS-3UTR CAA 90 bp TGCTCTGGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATGTGCTGTCTTTGGGGTaGCCAAAATGTACCCTCAGA +
Preference number: 5 (lower is better)
Translates to: CSGCNGWILKGNPCCWWNVLSLG*PKCTLR
Trigger: TCTGAGGGTACATTTTGGCAACCCCAAAGACAGCAC...ATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CAA 90 bp CCGAATTTCCATCTTGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTCTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: PNFHLGPCTFALEDLSAFLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...AAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp AGTGAACTAATGAGTCTCTTGGACCTTATGTTGCTCTGGCTTCAGTCGAGGCGCGTTAACATTCCCAACTaGTGTCTCTTCAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SELMSLLDLMLLWLQSRRVNIPN*CLFRCS
Trigger: TGAGCACCTGAAGAGACACAAGTTGGGAATGTTAAC...GCGCCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CAA 90 bp AAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGACCCTATCTTTCGCTTaGCTCTTGGAAAGACAGGCA +
Preference number: 5 (lower is better)
Translates to: KNFTSAGDGGGSRGIVKVTLSFA*LLERQA
Trigger: TGCCTGTCTTTCCAAGAGCAAAGCGAAAGATAGGGT...CACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CAA 90 bp GCTATTGCCAGCAGCTTGAGCTTCGGGAGTGCTAATCAAAATTCACATGCAAAACTCTTGGACCTTATGTaGCTCTGGCTTCAGTCGAGG +
Preference number: 5 (lower is better)
Translates to: AIASSLSFGSANQNSHAKLLDLM*LWLQSR
Trigger: CCTCGACTGAAGCCAGAGCAACATAAGGTCCAAGAG...TTTTGCATGTGAATTTTGATTAGCACTCCCGAAGCTCAAGCTGCTGGCAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS TCA 90 bp AAGGACAGAGATAGGAGAGGGCTGCTTTGGGAGTTCACAGGAGCCTaGACTGATATTTTACATGCAGATGAGCACACTCTTAGAGATCAC +
Preference number: 5 (lower is better)
Translates to: KDRDRRGLLWEFTGA*TDILHADEHTLRDH
Trigger: GTGATCTCTAAGAGTGTGCTCATCTGCATGTAAAATATCAGTTCAGGCTCCTGTGAACTCCCAAAGCAGCCCTCTCCTATCTCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS-3UTR CAA 90 bp AAGAACTTCACTTCTGCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGCCCACTTCAGTCCTTTaGATTGCTGTTTCAAGACTC +
Preference number: 5 (lower is better)
Translates to: KNFTSAGDGGGSRGIVKVPTSVL*IAVSRL
Trigger: GAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGGG...CACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000535744.5
CDS-3UTR CAA 90 bp GCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACACTGAGAGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTCCTA +
Preference number: 5 (lower is better)
Translates to: ALEDLSAFGHELGPLTLRALKGV*TFMAFL
Trigger: TAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...TCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
CDS-3UTR CAA 90 bp ATTTCCTTTTGCTCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTCCTA +
Preference number: 5 (lower is better)
Translates to: ISFCSGALGANKASHLLVALKGV*TFMAFL
Trigger: TAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...TACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGAGCAAAAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTACTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp TCAGGCGCCCTAGGTGCAAATAAAGCATCCCATCTGCTCGTAATTAGAACTAAATTGGCTGCCAGATGCTaGGCTCGAATGCGAAAATTC +
Preference number: 5 (lower is better)
Translates to: SGALGANKASHLLVIRTKLAARC*ARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAA...TTTAGTTCTAATTACGAGCAGATGGGATGCTTTATTTGCACCTAGGGCGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGGAGGAACTGCCACATaGGCACTGTCAAAGACACGT +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILGGTAT*ALSKTR
Trigger: ACGTGTCTTTGACAGTGCCAATGTGGCAGTTCCTCC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp AGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTGAGCCAACGCTGTATTaGCAGGTGATCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: SWNLTCFIKTMQRSCSGCEPTLY*QVISYQ
Trigger: CTGATAACTGATCACCTGCAAATACAGCGTTGGCTC...ACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATTGCCAGCATCGGCATaGACAGCGCACTCATGCATT +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILLPASA*TAHSCI
Trigger: AATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GCTGGAGATGGAGGTGGTTCCCGAGGTATAGTGAAAGTGGCTACAGTTGGAATCAGACTGGGATCCAAATaGTTATGTACTGTATTCCAG +
Preference number: 5 (lower is better)
Translates to: AGDGGGSRGIVKVATVGIRLGSK*LCTVFQ
Trigger: CTGGAATACAGTACATAACAATTTGGATCCCAGTCT...GATTCCAACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS-3UTR CAA 90 bp AGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGTGTTCAACAAGGGGCCTTCCTaGAACTCAATCAAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SNILAYWRNSNNTYKPVFNKGPS*NSIKEP
Trigger: TGGCTCCTTGATTGAGTTCAAGGAAGGCCCCTTGTT...GAACACAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp GACTTCCTATCTGTCAAGTGTCTGAACAATGGGCCCCTCGAATGGATTAGAGAGGAACTAATGAGTCTCTaGGACCTTATGTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: DFLSVKCLNNGPLEWIREELMSL*DLMLLW
Trigger: CCAGAGCAACATAAGGTCCAAGAGACTCATTAGTTC...CTCTCTAATCCATTCGAGGGGCCCATTGTTCAGACACTTGACAGATAGGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS GCA 90 bp ATATTCCAGGAGGAACTGCCACATTGGCACTGTCAAAGACACGTTTaGCTCCAGATTTGGTACTATAAAGATGAGCTAGTTCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: IFQEELPHWHCQRHV*LQIWYYKDELVQAQ
Trigger: CTGAGCCTGAACTAGCTCATCTTTATAGTACCAAATCTGGAGGCAAACGTGTCTTTGACAGTGCCAATGTGGCAGTTCCTCCTGGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp TGCTCTGGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTGCTGTTGGTGGAATCCCACTTCAGTCCTTTaGATTGCTGTTTCAAGACTC +
Preference number: 5 (lower is better)
Translates to: CSGCNGWILKGNPCCWWNPTSVL*IAVSRL
Trigger: GAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGGG...ATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000535744.5
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAGTGCTGTCTTTGGGGTaGCCAAAATGTACCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILVLSLG*PKCTLR
Trigger: TCTGAGGGTACATTTTGGCAACCCCAAAGACAGCAC...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp TATGGCAATATAACAGCCAAGCAATGGCAATCACACCTGATGCCCACTTCTGCTGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTCCTA +
Preference number: 5 (lower is better)
Translates to: YGNITAKQWQSHLMPTSAALKGV*TFMAFL
Trigger: TAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...AGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559568.5
CDS-3UTR CAA 90 bp TCATGGCCTTCCTATCATGATGTCCTCTTGACCTTCTGCTTTTCCCCTTTGATCAAGATTTATCAGCATTaGGACATGAGCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SWPSYHDVLLTFCFSPLIKIYQH*DMSWVL
Trigger: GAGGACCCAGCTCATGTCCAAATGCTGATAAATCTT...GATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGGCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000561339.1
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATTGGCTGCCAGATGCTaGGCTCGAATGCGAAAATTC +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILLAARC*ARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCTGATGCGATTCCAGTaGGCTGCCAGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSLMRFQ*AARCLA
Trigger: AGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCTGCATAGCGACTGGTaGCCAGCATCGGCATTGACA +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSLHSDW*PASALT
Trigger: TGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CCGAATTTCCATCTTGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTAAAACCAGTGAGAGATaGCTGTGTCTTAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PNFHLGPCTFALEDLSAFKTSER*LCLSWV
Trigger: CACCCAGCTAAGACACAGCAATCTCTCACTGGTTTT...AAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514049.5
CDS CCA 90 bp ATTTGGTACTATAAAGATGAGCTAGTTCAGGCTCAGAGCCCAGGATaGGTATGTCTAACATATCGGCCACAGCTAAATCATCTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: IWYYKDELVQAQSPG*VCLTYRPQLNHLCG
Trigger: TCCACAGAGATGATTTAGCTGTGGCCGATATGTTAGACATACCCATCCTGGGCTCTGAGCCTGAACTAGCTCATCTTTATAGTACCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp TTTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTCCTATCATGATGTCCCCCACTTCAGTCCTTTaGATTGCTGTTTCAAGACTC +
Preference number: 5 (lower is better)
Translates to: FQGSQRCFDFHGLPIMMSPTSVL*IAVSRL
Trigger: GAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGGG...GGACATCATGATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561339.1
CDS-3UTR CAA 90 bp CCGAATTTCCATCTTGGCCCTTGTACCTTTGCCCTGGAAGATTTATCAGCATTTAAGATTTATCAGCATTaGGACATGAGCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PNFHLGPCTFALEDLSAFKIYQH*DMSWVL
Trigger: GAGGACCCAGCTCATGTCCAAATGCTGATAAATCTT...AAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp GTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGAAGATTTATCAGCATTaGGACATGAGCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: VQAISWLIGVTATTHTSLKIYQH*DMSWVL
Trigger: GAGGACCCAGCTCATGTCCAAATGCTGATAAATCTT...CAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATTGGCCCTTGTACCTTaGCCCTGGAAGATTTATCAG +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILLALVP*PWKIYQ
Trigger: CTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CAGTGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGTTGGCCCTTGTACCTTaGCCCTGGAAGATTTATCAG +
Preference number: 5 (lower is better)
Translates to: QCTSNILAYWRNSNNTYKLALVP*PWKIYQ
Trigger: CTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAA...CTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACCTGATGCGATTCCAGTaGGCTGCCAGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNLMRFQ*AARCLA
Trigger: AGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAG...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACTGATGCGATTCCAGTaGGCTGCCAGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRLMRFQ*AARCLA
Trigger: AGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp TTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAATTTGAATAAAACACTGATGCGATTCCAGTaGGCTGCCAGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LLSSCREHFPAETNLNKTLMRFQ*AARCLA
Trigger: AGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAG...TGTTTTATTCAAATTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTATCAAGGTTCCCAGATTaGACGGCTGCATGTAGACTT +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILSRFPD*TAACRL
Trigger: AAGTCTACATGCAGCCGTCAAATCTGGGAACCTTGA...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAGGGAACCGTTTCTCATaGACTGGCTGTGCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRGNRFS*TGCACC
Trigger: ACAGCACGCACAGCCAGTCAATGAGAAACGGTTCCC...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTACGCTGATTTTCCCGTaGGGCTCTATCAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSTLIFP*GSISMS
Trigger: GGACATGCTGATAGAGCCCAACGGGAAAATCAGCGT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTGTAATGGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: GILRASSKLCRGAALGVMALKGV*TFMAFD
Trigger: ATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...CATTACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CAA 90 bp CAGTGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGCCGAGACCAATTaGAATAAAACAAGGGGCCTT +
Preference number: 5 (lower is better)
Translates to: QCTSNILAYWRNSNNTYKPAETN*NKTRGL
Trigger: AAGGCCCCTTGTTTTATTCAAATTGGTCTCGGCAGG...CTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp ACCTTTGCCCTGGAAGATTTATCAGCATTTGGACATGAGCTGGGTCCTCTAACAAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TFALEDLSAFGHELGPLTKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...TGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514049.5
ENST00000559568.5
ENST00000561339.1
CDS-3UTR CAA 90 bp CCACATAATGACTTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGTTTCCATCTTGGCCCTaGTACCTTTGCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PHNDFICLIPKLNAVSSEFPSWP*YLCPGR
Trigger: TCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAA...CTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAAGTCATTATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGACTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp TTACTCTCATCATGTCGAGAACATTTTCCTGCCGAGACCAATTTGAATAAAACACTCCGAATTTCCATCTaGGCCCTTGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LLSSCREHFPAETNLNKTLRISI*ALVPLP
Trigger: GGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAG...TGTTTTATTCAAATTGGTCTCGGCAGGAAAATGTTCTCGACATGATGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGGGAACCGTTTCTCATaGACTGGCTGTGCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIGNRFS*TGCACC
Trigger: ACAGCACGCACAGCCAGTCAATGAGAAACGGTTCCC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGTGAGGTTGGTGACATaGTCTGCAGGTGGGAATGCT +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNVRLVT*SAGGNA
Trigger: AGCATTCCCACCTGCAGACAATGTCACCAACCTCAC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAACGCTGATTTTCCCGTaGGGCTCTATCAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRTLIFP*GSISMS
Trigger: GGACATGCTGATAGAGCCCAACGGGAAAATCAGCGT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGCTGCATAGCGACTGGTaGCCAGCATCGGCATTGACA +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLLHSDW*PASALT
Trigger: TGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAG...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAAGTGCTGTCTTTGGGGTaGCCAAAATGTACCCTCAGA +
Preference number: 5 (lower is better)
Translates to: MCCIIKSNWNWMSVREHEVLSLG*PKCTLR
Trigger: TCTGAGGGTACATTTTGGCAACCCCAAAGACAGCAC...TTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CAA 90 bp AGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGCCTGTGTTCAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SNILAYWRNSNNTYKPVFKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...GAACACAGGCTTGTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp AAACAGTGTACAAGCAATATCCTGGCTTATTGGCGTAACAGCAACAACACATACAAGATTTATCAGCATTaGGACATGAGCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: KQCTSNILAYWRNSNNTYKIYQH*DMSWVL
Trigger: GAGGACCCAGCTCATGTCCAAATGCTGATAAATCTT...GTATGTGTTGTTGCTGTTACGCCAATAAGCCAGGATATTGCTTGTACACTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTTGGCCCTTGTACCTTaGCCCTGGAAGATTTATCAG +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSLALVP*PWKIYQ
Trigger: CTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTTCCATCTTGGCCCTaGTACCTTTGCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNFPSWP*YLCPGR
Trigger: TCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATTTCCATCTTGGCCCTaGTACCTTTGCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRFPSWP*YLCPGR
Trigger: TCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAGTTGGAATCTTACGTGCTTCATCAAAACTATGCAGAGGAGCTGCTCTGGGTAGAGGAAGAATTTTCTaGCTTTGTAGCATTTCCATG +
Preference number: 5 (lower is better)
Translates to: TVGILRASSKLCRGAALGRGRIF*LCSISM
Trigger: CATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCT...ACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514049.5
ENST00000559568.5
CDS-3UTR CAA 90 bp AAGCGAGGGTCCTGTGTTATTACTCTCATCATGTCGAGAACATTTTCCTGCCGAAGAGGAAGAATTTTCTaGCTTTGTAGCATTTCCATG +
Preference number: 5 (lower is better)
Translates to: KRGSCVITLIMSRTFSCRRGRIF*LCSISM
Trigger: CATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCT...TCGGCAGGAAAATGTTCTCGACATGATGAGAGTAATAACACAGGACCCTCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATTGGCTGCCAGATGCTaGGCTCGAATGCGAAAATTC +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRLAARC*ARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGAGCCAACGCTGTATTaGCAGGTGATCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSEPTLY*QVISYQ
Trigger: CTGATAACTGATCACCTGCAAATACAGCGTTGGCTC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGTGAGGTTGGTGACATaGTCTGCAGGTGGGAATGCT +
Preference number: 5 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNVRLVT*SAGGNA
Trigger: AGCATTCCCACCTGCAGACAATGTCACCAACCTCAC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGGTGAGGTTGGTGACATaGTCTGCAGGTGGGAATGCT +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLVRLVT*SAGGNA
Trigger: AGCATTCCCACCTGCAGACAATGTCACCAACCTCAC...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTACGCTGATTTTCCCGTaGGGCTCTATCAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLTLIFP*GSISMS
Trigger: GGACATGCTGATAGAGCCCAACGGGAAAATCAGCGT...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTTGCCAGCATCGGCATaGACAGCGCACTCATGCATT +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPILPASA*TAHSCI
Trigger: AATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp TGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGACCCTATCTTTCGCTTaGCTCTTGGAAAGACAGGCA +
Preference number: 5 (lower is better)
Translates to: CCIIKSNWNWMSVREHEQTLSFA*LLERQA
Trigger: TGCCTGTCTTTCCAAGAGCAAAGCGAAAGATAGGGT...CTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS GCA 90 bp TATCATCTGTTGCTGACTATAAATATCATATATTCCAGGAGGAACTaGCACATTGGCACTGTCAAAGACACGTTTGCCTCCAGATTTGGT +
Preference number: 5 (lower is better)
Translates to: YHLLLTINIIYSRRN*HIGTVKDTFASRFG
Trigger: ACCAAATCTGGAGGCAAACGTGTCTTTGACAGTGCCAATGTGGCAGTTCCTCCTGGAATATATGATATTTATAGTCAGCAACAGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTCCCACTTCAGTCCTTTaGATTGCTGTTTCAAGACTC +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSPTSVL*IAVSRL
Trigger: GAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGGG...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000514049.5
CDS-3UTR CAA 90 bp CTGCCACCTAGATACATTCTGATGCTTTGGTTAACTAGATGCTGGCTTATCCTAAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LPPRYILMLWLTRCWLILKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...TAGGATAAGCCAGCATCTAGTTAACCAAAGCATCAGAATGTATCTAGGTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTAAGATTTATCAGCATTaGGACATGAGCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSKIYQH*DMSWVL
Trigger: GAGGACCCAGCTCATGTCCAAATGCTGATAAATCTT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTGGCCCTTGTACCTTaGCCCTGGAAGATTTATCAG +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNLALVP*PWKIYQ
Trigger: CTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTTTCCATCTTGGCCCTaGTACCTTTGCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIFPSWP*YLCPGR
Trigger: TCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTTGGCTGCCAGATGCTaGGCTCGAATGCGAAAATTC +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPILAARC*ARMRKF
Trigger: GAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATCAAGGTTCCCAGATTaGACGGCTGCATGTAGACTT +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRSRFPD*TAACRL
Trigger: AAGTCTACATGCAGCCGTCAAATCTGGGAACCTTGA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACGAGCCAACGCTGTATTaGCAGGTGATCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNEPTLY*QVISYQ
Trigger: CTGATAACTGATCACCTGCAAATACAGCGTTGGCTC...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCACCAAAGCTGGCTCTaGTGCCCATTTCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNHQSWL*CPFLSP
Trigger: TGGAGAAAGAAATGGGCACAAGAGCCAGCTTTGGTG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGCACCAAAGCTGGCTCTaGTGCCCATTTCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLHQSWL*CPFLSP
Trigger: TGGAGAAAGAAATGGGCACAAGAGCCAGCTTTGGTG...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTCACCAAAGCTGGCTCTaGTGCCCATTTCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIHQSWL*CPFLSP
Trigger: TGGAGAAAGAAATGGGCACAAGAGCCAGCTTTGGTG...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTCGATCACACCCCCTaGACTGAGAAATGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNFDHTP*TEKCLE
Trigger: CTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTTTTCTTCCTTTCCTTaGGAACAAAGCGGGGCACTT +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSFSSFP*EQSGAL
Trigger: AAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAAA...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACAAAACCAGTGAGAGATaGCTGTGTCTTAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNKTSER*LCLSWV
Trigger: CACCCAGCTAAGACACAGCAATCTCTCACTGGTTTT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTGTTAACATTCCCAACTaGTGTCTCTTCAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSVNIPN*CLFRCS
Trigger: TGAGCACCTGAAGAGACACAAGTTGGGAATGTTAAC...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335894.9
ENST00000546225.5
CDS CCA 90 bp GTTGCTGACTATAAATATCATATATTCCAGGAGGAACTGCCACATTaGCACTGTCAAAGACACGTTTGCCTCCAGATTTGGTACTATAAA +
Preference number: 5 (lower is better)
Translates to: VADYKYHIFQEELPH*HCQRHVCLQIWYYK
Trigger: TTTATAGTACCAAATCTGGAGGCAAACGTGTCTTTGACAGTGCCAATGTGGCAGTTCCTCCTGGAATATATGATATTTATAGTCAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp ATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACCCACTTCAGTCCTTTaGATTGCTGTTTCAAGACTC +
Preference number: 5 (lower is better)
Translates to: MCCIIKSNWNWMSVREHEPTSVL*IAVSRL
Trigger: GAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGGG...TTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CAA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTTCAAGGTTCCCAGATTaGACGGCTGCATGTAGACTT +
Preference number: 5 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLSRFPD*TAACRL
Trigger: AAGTCTACATGCAGCCGTCAAATCTGGGAACCTTGA...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGATCAGGTGTGATAATTTaGAACCTGTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRSGVII*NLSCRS
Trigger: TGACCTGCAGGACAGGTTCAAAATTATCACACCTGA...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTCAGGTGTGATAATTTaGAACCTGTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNSGVII*NLSCRS
Trigger: TGACCTGCAGGACAGGTTCAAAATTATCACACCTGA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTGAGCCAACGCTGTATTaGCAGGTGATCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIEPTLY*QVISYQ
Trigger: CTGATAACTGATCACCTGCAAATACAGCGTTGGCTC...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTTCGATCACACCCCCTaGACTGAGAAATGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLFDHTP*TEKCLE
Trigger: CTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGAA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTTCGATCACACCCCCTaGACTGAGAAATGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIFDHTP*TEKCLE
Trigger: CTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGAA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTTTTCTTCCTTTCCTTaGGAACAAAGCGGGGCACTT +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNFSSFP*EQSGAL
Trigger: AAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAAA...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTAAAACCAGTGAGAGATaGCTGTGTCTTAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIKTSER*LCLSWV
Trigger: CACCCAGCTAAGACACAGCAATCTCTCACTGGTTTT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGAAAACCAGTGAGAGATaGCTGTGTCTTAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLKTSER*LCLSWV
Trigger: CACCCAGCTAAGACACAGCAATCTCTCACTGGTTTT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp TCCGATAGATTTAACAGTTTTGTACTGTTAAGCAGGGGCTCTCACCATGTGAATATCATCTTTGGACTGTaGCTCCTCTTCAAATCTCAT +
Preference number: 5 (lower is better)
Translates to: SDRFNSFVLLSRGSHHVNIIFGL*LLFKSH
Trigger: ATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGAT...ATTCACATGGTGAGAGCCCCTGCTTAACAGTACAAAACTGTTAAATCTATCGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS-3UTR CAA 90 bp TGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAACATGAACAGACCAGGGATTTCTTCTaGTTTCCACATACCTTTGAG +
Preference number: 5 (lower is better)
Translates to: CCIIKSNWNWMSVREHEQTRDFF*FPHTFE
Trigger: CTCAAAGGTATGTGGAAACAAGAAGAAATCCCTGGT...CTGTTCATGTTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CAA 90 bp TTCAGGGCTCTCAAAGGTGTTTTGACTTTCATGGCCTTTGATCTTTGTTTCTTGTCTGATCAATTACAGTaGGAAGTAACCATTTGGAAG +
Preference number: 5 (lower is better)
Translates to: FRALKGVLTFMAFDLCFLSDQLQ*EVTIWK
Trigger: CTTCCAAATGGTTACTTCCAACTGTAATTGATCAGA...CAAGAAACAAAGATCAAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535744.5
CDS-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTCCTA +
Preference number: 5 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNALKGV*TFMAFL
Trigger: TAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp CCACATAATGACTTTATTTGCTTAATCCCCAAATTAAACGCCGTTTCAAGCGAGAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: PHNDFICLIPKLNAVSSEKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...CTCGCTTGAAACGGCGTTTAATTTGGGGATTAAGCAAATAAAGTCATTATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559568.5
ENST00000629425.2
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTAAGATTTATCAGCATTaGGACATGAGCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIKIYQH*DMSWVL
Trigger: GAGGACCCAGCTCATGTCCAAATGCTGATAAATCTT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTATGTTCTGCTGTGTGTaGAAATCGGCAATATGTTCT +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSMFCCV*KSAICS
Trigger: AGAACATATTGCCGATTTCAACACACAGCAGAACAT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTCAGGTGTGATAATTTaGAACCTGTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNSGVII*NLSCRS
Trigger: TGACCTGCAGGACAGGTTCAAAATTATCACACCTGA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATCTGTCAAAGACACGTTaGCCTCCAGATTTGGTACTA +
Preference number: 5 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNLSKTR*PPDLVL
Trigger: TAGTACCAAATCTGGAGGCAAACGTGTCTTTGACAG...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATTTTTCTTCCTTTCCTTaGGAACAAAGCGGGGCACTT +
Preference number: 5 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNFSSFP*EQSGAL
Trigger: AAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAAA...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACTAGAGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTATCATCTTTGGACTGTaGCTCCTCTTCAAATCTCAT +
Preference number: 5 (lower is better)
Translates to: TREYKCLFKLQSSSYTPSIIFGL*LLFKSH
Trigger: ATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGAT...AGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCTCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTGCTCTCAAAGGTGTTTaGACTTTCATGGCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIALKGV*TFMAFV
Trigger: GACAAAGGCCATGAAAGTCAAAACACCTTTGAGAGC...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTCGAAACCTTTATCTTaGCTCTTGGAAAGACAGGCA +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLSKPLS*LLERQA
Trigger: TGCCTGTCTTTCCAAGAGCAAAGATAAAGGTTTCGA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGTTGACTGAGAAATGTTaGGAGGAATTTCCTCCACGT +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLLTEKC*EEFPPR
Trigger: ACGTGGAGGAAATTCCTCCAAACATTTCTCAGTCAA...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTTGACTGAGAAATGTTaGGAGGAATTTCCTCCACGT +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPILTEKC*EEFPPR
Trigger: ACGTGGAGGAAATTCCTCCAAACATTTCTCAGTCAA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACATGGTGGTCTTAAAATaGGTCTCGCCTTGCATATTA +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNMVVLK*VSPCIL
Trigger: TAATATGCAAGGCGAGACCAATTTTAAGACCACCAT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAAGACTGGGATCCAAATaGTTATGTACTGTATTCCAG +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRRLGSK*LCTVFQ
Trigger: CTGGAATACAGTACATAACAATTTGGATCCCAGTCT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTATACTTAAAATCCCTTaGTGGGCATCTGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIILKIP*WASACK
Trigger: CTTACAAGCAGATGCCCACAAAGGGATTTTAAGTAT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGAAGCTAAAATGTTCCTaGAATGCTAAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLKLKCS*NAKKSG
Trigger: CCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp ACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACTAAGAAGAGGAAGAATTTTCTaGCTTTGTAGCATTTCCATG +
Preference number: 5 (lower is better)
Translates to: TNVYSSYRARATLHLKLRRGRIF*LCSISM
Trigger: CATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCT...TCTTAGTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp AGAATACAAATGTTTATTCAAGCTACAGAGCTCGAGCTACACTCCATCTTAAACAGAGGAAGAATTTTCTaGCTTTGTAGCATTTCCATG +
Preference number: 5 (lower is better)
Translates to: RIQMFIQATELELHSILNRGRIF*LCSISM
Trigger: CATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCT...GTTTAAGATGGAGTGTAGCTCGAGCTCTGTAGCTTGAATAAACATTTGTATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGATGTTCTGCTGTGTGTaGAAATCGGCAATATGTTCT +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLMFCCV*KSAICS
Trigger: AGAACATATTGCCGATTTCAACACACAGCAGAACAT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTATGTTCTGCTGTGTGTaGAAATCGGCAATATGTTCT +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIMFCCV*KSAICS
Trigger: AGAACATATTGCCGATTTCAACACACAGCAGAACAT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGATGGTGGTCTTAAAATaGGTCTCGCCTTGCATATTA +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLMVVLK*VSPCIL
Trigger: TAATATGCAAGGCGAGACCAATTTTAAGACCACCAT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTATGGTGGTCTTAAAATaGGTCTCGCCTTGCATATTA +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPIMVVLK*VSPCIL
Trigger: TAATATGCAAGGCGAGACCAATTTTAAGACCACCAT...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CTGAGTTTGAGAAGAAGAAGGGATTGTTCAACACTCTCAAATGAAAACACAAATATCATCTTTGGACTGTaGCTCCTCTTCAAATCTCAT +
Preference number: 5 (lower is better)
Translates to: LSLRRRRDCSTLSNENTNIIFGL*LLFKSH
Trigger: ATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGAT...ATTTGTGTTTTCATTTGAGAGTGTTGAACAATCCCTTCTTCTTCTCAAACTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS-3UTR CAA 90 bp CTTTTTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTATCATCTTTGGACTGTaGCTCCTCTTCAAATCTCAT +
Preference number: 5 (lower is better)
Translates to: LFIPDWDPNCYVLYSRIIIIFGL*LLFKSH
Trigger: ATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGAT...AATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS-3UTR CAA 90 bp TTATTCCAGACTGGGATCCAAATTGTTATGTACTGTATTCCAGGATCATTTCTTATCATCTTTGGACTGTaGCTCCTCTTCAAATCTCAT +
Preference number: 5 (lower is better)
Translates to: LFQTGIQIVMYCIPGSFLIIFGL*LLFKSH
Trigger: ATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGAT...AAGAAATGATCCTGGAATACAGTACATAACAATTTGGATCCCAGTCTGGAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358767.7
ENST00000514049.5
CDS TCA 90 bp TTAAATACTTCTCAATGTGAATTCTTAACCCCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCTGAATGTCTAGAGTCTCTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: LNTSQCEFLTPLQSF*LLFQDSECLESLLF
Trigger: AAAAAGGAGAGACTCTAGACATTCAGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGGGGTTAAGAATTCACATTGAGAAGTATTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000512104.5
ENST00000535744.5
ENST00000560497.1
CDS-3UTR CAA 90 bp CATTTCATTATAATCTGTTCTGATTCACCTCCTAGCACACAAAGCAAACCAATTTCTGATCAATTACAGTaGGAAGTAACCATTTGGAAG +
Preference number: 5 (lower is better)
Translates to: HFIIICSDSPPSTQSKPISDQLQ*EVTIWK
Trigger: CTTCCAAATGGTTACTTCCAACTGTAATTGATCAGA...AATTGGTTTGCTTTGTGTGCTAGGAGGTGAATCAGAACAGATTATAATGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS-3UTR CAA 90 bp TTCTTAATGTGTTGTATTATAAAGTCTAACTGGAACTGGATGTCAGTGAGGGAATCTGATCAATTACAGTaGGAAGTAACCATTTGGAAG +
Preference number: 5 (lower is better)
Translates to: FLMCCIIKSNWNWMSVRESDQLQ*EVTIWK
Trigger: CTTCCAAATGGTTACTTCCAACTGTAATTGATCAGA...TTCCCTCACTGACATCCAGTTCCAGTTAGACTTTATAATACAACACATTAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512104.5
CDS-3UTR CAA 90 bp GTCAGCACTACTACAATCTTAACAGTCTGCCTTTTTAAAGGTAGTATAATGTTGAGAGGAAGAATTTTCTaGCTTTGTAGCATTTCCATG +
Preference number: 5 (lower is better)
Translates to: VSTTTILTVCLFKGSIMLRGRIF*LCSISM
Trigger: CATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCT...CAACATTATACTACCTTTAAAAAGGCAGACTGTTAAGATTGTAGTAGTGCTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000358767.7
ENST00000514049.5
ENST00000546225.5
CDS CCA 72 bp AGTCACCGGGAGTGTGCTGGGCCGTGGGGGAAGGTCTaGGTGGGCATTTTTGGGAGCCTCTCGCGAGTTGGA +
Preference number: 6 (lower is better)
Translates to: SHRECAGPWGKV*VGIFGSLSRVG
Trigger: TCCAACTCGCGAGAGGCTCCCAAAAATGCCCACCCAGACCTTCCCCCACGGCCCAGCACACTCCCGGTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560497.1
CDS CCA 72 bp ATCCGACAGGGTCGTGGTTTTCAGTGTTCTGTGCCATaGCTAGGTCAGGGAACGGCTACCTCCGCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: IRQGRGFQCSVP*LGQGTATSAEA
Trigger: CGCCTCCGCGGAGGTAGCCGTTCCCTGACCTAGCCATGGCACAGAACACTGAAAACCACGACCCTGTCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335894.9
ENST00000512104.5
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
ENST00000629425.2
CDS CCA 72 bp TCATGGATCTGGATTAAGATGGATCCGACAGGGTCGTaGTTTTCAGTGTTCTGTGCCATGGCTAGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: SWIWIKMDPTGS*FSVFCAMARSG
Trigger: CCCTGACCTAGCCATGGCACAGAACACTGAAAACCACGACCCTGTCGGATCCATCTTAATCCAGATCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335894.9
ENST00000512104.5
ENST00000514049.5
ENST00000535744.5
ENST00000629425.2
CDS CCA 72 bp ATGAAGAGATGGCGAGCAAAGGTCATGAGGACCCCCTaGAGATCCTCGCCGATTGTTAACATTCCCAACTTG +
Preference number: 6 (lower is better)
Translates to: MKRWRAKVMRTP*RSSPIVNIPNL
Trigger: CAAGTTGGGAATGTTAACAATCGGCGAGGATCTCCAGGGGGTCCTCATGACCTTTGCTCGCCATCTCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335894.9
ENST00000546225.5
ENST00000558759.1
CDS CAA 90 bp GAACTTTTGTTGCCATCTCCAGCTGTCAAGCAGTCACCCATACTCTaGCCCTGCAGCAAAAGGAAGGGACATCAGGTGACAGACCCTAAA +
Preference number: 6 (lower is better)
Translates to: ELLLPSPAVKQSPIL*PCSKRKGHQVTDPK
Trigger: TTTAGGGTCTGTCACCTGATGTCCCTTCCTTTTGCTGCAGGGCAAGAGTATGGGTGACTGCTTGACAGCTGGAGATGGCAACAAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559172.1
CDS CAA 90 bp TGCCAAGGCCTCCCCTTTCCAGTCATTTCCTGGATCTGGGAGAGATaGAGTCTGATACCTTTAAACGACTTTGCTCTTGGAAAGACAGGC +
Preference number: 6 (lower is better)
Translates to: CQGLPFPVISWIWER*SLIPLNDFALGKTG
Trigger: GCCTGTCTTTCCAAGAGCAAAGTCGTTTAAAGGTATCAGACTCAATCTCTCCCAGATCCAGGAAATGACTGGAAAGGGGAGGCCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS GCA 72 bp GGAAATTTTGCTTCTGTAGAGAATCTCCACCAATGCTaGCAAGGCCTCCCCTTTCCAGTCATTTCCTGGATC +
Preference number: 6 (lower is better)
Translates to: GNFASVENLHQC*QGLPFPVISWI
Trigger: GATCCAGGAAATGACTGGAAAGGGGAGGCCTTGGCAGCATTGGTGGAGATTCTCTACAGAAGCAAAATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS CCA 72 bp CAATGCTGCCAAGGCCTCCCCTTTCCAGTCATTTCCTaGATCTGGGAGAGATTGAGTCTGATACCTTTAAAC +
Preference number: 6 (lower is better)
Translates to: QCCQGLPFPVIS*IWERLSLIPLN
Trigger: GTTTAAAGGTATCAGACTCAATCTCTCCCAGATCCAGGAAATGACTGGAAAGGGGAGGCCTTGGCAGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS CAA 72 bp GATAAAGGTCTTCATGGATCTCCTAGAGTGTCCGATTaGTCTCTCCTCCACTCCCGACGTCATGGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: DKGLHGSPRVSD*SLLHSRRHGFK
Trigger: TTTGAACCCATGACGTCGGGAGTGGAGGAGAGACAAATCGGACACTCTAGGAGATCCATGAAGACCTTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560497.1
CDS TCA 72 bp GATAGGAGAGGGCTGCTTTGGGAGTTCACAGGAGCCTaGACTGATATTTTACATGCAGATGAGCACACTCTT +
Preference number: 6 (lower is better)
Translates to: DRRGLLWEFTGA*TDILHADEHTL
Trigger: AAGAGTGTGCTCATCTGCATGTAAAATATCAGTTCAGGCTCCTGTGAACTCCCAAAGCAGCCCTCTCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS CCA 72 bp TGCCAAGGCCTCCCCTTTCCAGTCATTTCCTGGATCTaGGAGAGATTGAGTCTGATACCTTTAAACGACTTT +
Preference number: 6 (lower is better)
Translates to: CQGLPFPVISWI*ERLSLIPLNDF
Trigger: AAAGTCGTTTAAAGGTATCAGACTCAATCTCTCCCAGATCCAGGAAATGACTGGAAAGGGGAGGCCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS GCA 72 bp TCTGGGTGTAATGGGTGGATTCTGAAAGGTAATCCTTaGTGTTGGTGGAATCAGCCCTCGTTCTATCATACT +
Preference number: 6 (lower is better)
Translates to: SGCNGWILKGNP*CWWNQPSFYHT
Trigger: AGTATGATAGAACGAGGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335894.9
ENST00000514049.5
ENST00000535744.5
ENST00000559568.5
ENST00000629425.2
CDS CCA 72 bp CATTGGCACTGTCAAAGACACGTTTGCCTCCAGATTTaGTACTATAAAGATGAGCTAGTTCAGGCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: HWHCQRHVCLQI*YYKDELVQAQS
Trigger: GCTCTGAGCCTGAACTAGCTCATCTTTATAGTACCAAATCTGGAGGCAAACGTGTCTTTGACAGTGCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS CCA 72 bp TTGTTTCTTGGGAAAGAACTTCACTTCTGCTGGAGATaGAGGTGGTTCCCGAGGTATAGTGAAAGTGGTCTT +
Preference number: 6 (lower is better)
Translates to: LFLGKELHFCWR*RWFPRYSESGL
Trigger: AAGACCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561339.1
CDS CAA 72 bp CTCCCCTTTCCAGTCATTTCCTGGATCTGGGAGAGATaGAGTCTGATACCTTTAAACGACTTTGCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: LPFPVISWIWER*SLIPLNDFALG
Trigger: TCCAAGAGCAAAGTCGTTTAAAGGTATCAGACTCAATCTCTCCCAGATCCAGGAAATGACTGGAAAGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS CAA 72 bp GGCCAGCAAACAGAAGTGGTCTTGCAAAGCTGTCTTTaGTGGGGAAATTTTGCTTCTGTAGAGAATCTCCAC +
Preference number: 6 (lower is better)
Translates to: GQQTEVVLQSCL*WGNFASVENLH
Trigger: GTGGAGATTCTCTACAGAAGCAAAATTTCCCCACAAAAGACAGCTTTGCAAGACCACTTCTGTTTGCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560790.1
CDS CAA 90 bp ATTTCCTCGGAACTCAGAGTCCATTTTAAAGAGCCAACGCTGTATTaGCAGGTGATCAGTTATCAGCTGACTCAGCTGCTCTATCATCTG +
Preference number: 6 (lower is better)
Translates to: ISSELRVHFKEPTLY*QVISYQLTQLLYHL
Trigger: CAGATGATAGAGCAGCTGAGTCAGCTGATAACTGATCACCTGCAAATACAGCGTTGGCTCTTTAAAATGGACTCTGAGTTCCGAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS CAA 72 bp TTAGGGAAGATGTTTACAGCTTCAGGTGTGATAATTTaGAACCTGTCCTGCAGGTCACTTCTGTCCTCAAGG +
Preference number: 6 (lower is better)
Translates to: LGKMFTASGVII*NLSCRSLLSSR
Trigger: CCTTGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAATTATCACACCTGAAGCTGTAAACATCTTCCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS GCA 72 bp TTGCTGACTATAAATATCATATATTCCAGGAGGAACTaGCACATTGGCACTGTCAAAGACACGTTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLTINIIYSRRN*HIGTVKDTFAS
Trigger: GGAGGCAAACGTGTCTTTGACAGTGCCAATGTGGCAGTTCCTCCTGGAATATATGATATTTATAGTCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS CCA 72 bp CTATCTGTCAAGTGTCTGAACAATGGGCCCCTCGAATaGATTAGAGAGATTGTATTCCAGGATCATTTCTTG +
Preference number: 6 (lower is better)
Translates to: LSVKCLNNGPLE*IREIVFQDHFL
Trigger: CAAGAAATGATCCTGGAATACAATCTCTCTAATCCATTCGAGGGGCCCATTGTTCAGACACTTGACAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558759.1
CDS CCA 72 bp TATAAATATCATATATTCCAGGAGGAACTGCCACATTaGCACTGTCAAAGACACGTTTGCCTCCAGATTTGG +
Preference number: 6 (lower is better)
Translates to: YKYHIFQEELPH*HCQRHVCLQIW
Trigger: CCAAATCTGGAGGCAAACGTGTCTTTGACAGTGCCAATGTGGCAGTTCCTCCTGGAATATATGATATTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335894.9
CDS CAA 72 bp CCCTGGAGATCCTCGCCGATTGTTAACATTCCCAACTaGTGTCTCTTCAGGTGCTCATATAATATAAAAACA +
Preference number: 6 (lower is better)
Translates to: PWRSSPIVNIPN*CLFRCSYNIKT
Trigger: TGTTTTTATATTATATGAGCACCTGAAGAGACACAAGTTGGGAATGTTAACAATCGGCGAGGATCTCCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335894.9
ENST00000546225.5
ENST00000558759.1
CDS TCA 72 bp TCTCAATGTGAATTCTTAACCCCACTTCAGTCCTTTTaGTTGCTGTTTCAAGACTCTGAATGTCTAGAGTCT +
Preference number: 6 (lower is better)
Translates to: SQCEFLTPLQSF*LLFQDSECLES
Trigger: AGACTCTAGACATTCAGAGTCTTGAAACAGCAATCAAAAGGACTGAAGTGGGGTTAAGAATTCACATTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335894.9
ENST00000512104.5
ENST00000535744.5
ENST00000560497.1
CDS CAA 72 bp TGTCTAGAGTCTCTCCTTTTTCCTCAGGTGAGAATTTaGTTAATTTCTCCTTTAACTGATAAAGGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: CLESLLFPQVRI*LISPLTDKGLH
Trigger: ATGAAGACCTTTATCAGTTAAAGGAGAAATTAACAAAATTCTCACCTGAGGAAAAAGGAGAGACTCTAGACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335894.9
ENST00000512104.5
ENST00000514049.5
ENST00000535744.5
ENST00000560497.1
ENST00000629425.2