RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQCG (Homo sapiens)

Ensembl gene IDs: ENSG00000114473

Ensembl transcript IDs: ENST00000265239.11, ENST00000416896.1, ENST00000452735.1, ENST00000453254.5, ENST00000455191.5, ENST00000463651.1, ENST00000469822.1, ENST00000473225.1, ENST00000478903.5, ENST00000480302.5, ENST00000485787.1, ENST00000490748.5, ENST00000493624.1

Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGCTTCCCTaGGAAAGTCTCAATAGGAAACAACCTGTAGATGAGTCATCTTTG +
Preference number: 1 (lower is better)
Translates to: NRQSEINRQSEIRLP*ESLNRKQPVDESSL
Trigger: CAAAGATGACTCATCTACAGGTTGTTTCCTATTGAGACTTTCCCAGGGAAGCCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
3UTR CAA 90 bp CCCTGGGAAAGTCTCAATAGGAAACAACCTGTAGATGAGTCATCTTaGAGGTACCAGGTGTTTCTTAACTCTCTCCAAGTCCTTCCCACC +
Preference number: 2 (lower is better)
Translates to: PWESLNRKQPVDESS*RYQVFLNSLQVLPT
Trigger: GGTGGGAAGGACTTGGAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATTGAGACTTTCCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
3UTR-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGGAAACAACCTGTAGATaGGTCATCTTTGAGGTACCA +
Preference number: 2 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQETTCR*VIFEVP
Trigger: TGGTACCTCAAAGATGACTCATCTACAGGTTGTTTC...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
3UTR-3UTR CCA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTGAAGCCCTAAGTCAATaGTGTAATCCTAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFEALSQ*CNPKSG
Trigger: CCCTGATTTAGGATTACACCATTGACTTAGGGCTTC...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
3UTR-3UTR TCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGGAAACAACCTGTAGATaGGTCATCTTTGAGGTACCA +
Preference number: 2 (lower is better)
Translates to: FENPPNRQSEINRQSEIRETTCR*VIFEVP
Trigger: TGGTACCTCAAAGATGACTCATCTACAGGTTGTTTC...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
3UTR-3UTR CCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTGAAATCAGGCTTCCCTaGGAAAGTCTCAATAGGAAA +
Preference number: 2 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIEIRLP*ESLNRK
Trigger: TTTCCTATTGAGACTTTCCCAGGGAAGCCTGATTTC...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
3UTR CCA 72 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATaGTGTAATCCTAAATCAGGGTTTGAAAACCCACCT +
Preference number: 3 (lower is better)
Translates to: FFPARYEEALSQ*CNPKSGFENPP
Trigger: AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
3UTR-3UTR CAA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACGTAGATGAGTCATCTTaGAGGTACCAGGTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: EALSQWCNPKSGFENPPNVDESS*RYQVFL
Trigger: AAGAAACACCTGGTACCTCAAAGATGACTCATCTAC...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCACCGGCCTCTGTGTCTaGTTTCTGGCAAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSGGAVADRDGGKSLSPSTGLCV*FLASWV
Trigger: GACCCAACTTGCCAGAAATCAGACACAGAGGCCGGT...GGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTGGCGATAAAGCCTCCTaGAGGCAGTCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPGDKAS*RQSSSY
Trigger: GTATGAGGAGGACTGCCTGCAGGAGGCTTTATCGCC...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp GTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTGGTTCGCCTGTCACTaGCACCGTCATCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: VEGLLPIEMEGNLCLPPLWFACH*HRHLRM
Trigger: CATTCTGAGATGACGGTGTCAGTGACAGGCGAACCA...CAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp CCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGACCCTCCTTTGTTAGCTaGGAGGGGATCAGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PIEMEGNLCLPPLLAERGPSFVS*EGIRSD
Trigger: GTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGG...TCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp ATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGGGTGTCCTCCAGAACTaGCGAGATCCTCAGCACATC +
Preference number: 4 (lower is better)
Translates to: MEGNLCLPPLLAERGSGVGVLQN*RDPQHI
Trigger: GATGTGCTGAGGATCTCGGCAGTTCTGGAGGACACC...CACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp CAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTAGTGCAGTTACTAGGTaGGGACACGAGGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: QVEGLLPIEMEGNLCLPPSAVTR*GHEAAK
Trigger: TTTAGCTGCCTCGTGTCCGCACCTAGTAACTGCACT...AGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp ATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGAGAGGGGATCAGGAGTaGCAGCTCAATTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: MEGNLCLPPLLAERGSGVRGDQE*QLNCHL
Trigger: GAGATGGCAATTGAGCTGTCACTCCTGATCCCCTCT...CACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp TCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTCAGAATAGAGAGCTaGTCTGTGGTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSGGAVADRDGGKSLSPSFRIES*SVVSSR
Trigger: TCTGGAGGACACCACAGACCAGCTCTCTATTCTGAA...GGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp ATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGTGGGTCTGGGCAATCTaGAGCTCGGTATTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: MEGNLCLPPLLAERGSGVWVWAI*SSVLVF
Trigger: GAAAACCAATACCGAGCTGCAGATTGCCCAGACCCA...CACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp GAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGACACACTTTTTCTGGGTCTaGGCAATCTGCAGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: EGNLCLPPLLAERGSGVTHFFWV*AICSSV
Trigger: TACCGAGCTGCAGATTGCCCAGACCCAGAAAAAGTG...TGTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp GAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGACATTTTGGAGGAAGGTTTaGGTCTTCCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: EGNLCLPPLLAERGSGVTFWRKV*VFQAVF
Trigger: GAAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAA...TGTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp CAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTCTGCAATCACATCGCTaGAAAACTGCCTATCAATCT +
Preference number: 4 (lower is better)
Translates to: QVEGLLPIEMEGNLCLPPLQSHR*KTAYQS
Trigger: AGATTGATAGGCAGTTTTTCAGCGATGTGATTGCAG...AGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp CAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTTGCCTTCATCTCTTaGAGTTGGTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: QVEGLLPIEMEGNLCLPPFAFIS*SWSLRL
Trigger: TAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAA...AGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp GGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTCATCTCCTGGGTTCTTaGCTAATGTCCCAGGGATTA +
Preference number: 4 (lower is better)
Translates to: GLLPIEMEGNLCLPPLLAHLLGS*LMSQGL
Trigger: TAATCCCTGGGACATTAGCCAAGAACCCAGGAGATG...AGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTGGTTCGCCTGTCACTaGCACCGTCATCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPWFACH*HRHLRM
Trigger: CATTCTGAGATGACGGTGTCAGTGACAGGCGAACCA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGACCGGCCTCTGTGTCTaGTTTCTGGCAAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQTGLCV*FLASWV
Trigger: GACCCAACTTGCCAGAAATCAGACACAGAGGCCGGT...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTGGTGTCCTCCAGAACTaGCGAGATCCTCAGCACATC +
Preference number: 4 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFGVLQN*RDPQHI
Trigger: GATGTGCTGAGGATCTCGGCAGTTCTGGAGGACACC...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCTAGATTCATTTCTCTaGTTTTCACGCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPLDSFL*FSRRCS
Trigger: AGAGCATCTGCGTGAAAAGCAGAGAAATGAATCTAG...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp GAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGACATGTTTTCCCTCTCTTTaGTCAAAGCTTGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: EGNLCLPPLLAERGSGVTCFPSL*SKLAGD
Trigger: GTCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACA...TGTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp GTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGAGTTTCCGGGATTTCTaGGATGATTTCTATGTCTGT +
Preference number: 4 (lower is better)
Translates to: VEGLLPIEMEGNLCLPPLSFRDF*DDFYVC
Trigger: ACAGACATAGAAATCATCCCAGAAATCCCGGAAACT...CAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp CTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGTCTGTGTCTGATTTCTaGCAAGTTGGGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLPIEMEGNLCLPPLLAESVSDF*QVGSFL
Trigger: GAGGAAGGACCCAACTTGCCAGAAATCAGACACAGA...CTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp TTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGAGACTGTTGTAAGTaGCCGAATCTTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LPIEMEGNLCLPPLLAERGDCCK*PNLATP
Trigger: AGGAGTTGCAAGATTCGGCCACTTACAACAGTCTCC...CCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp TTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGCTGTTACACTTTTTCTaGGTCTGGGCAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPIEMEGNLCLPPLLAERLLHFF*VWAICS
Trigger: GCTGCAGATTGCCCAGACCCAGAAAAAGTGTAACAG...CCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGACCGGCCTCTGTGTCTaGTTTCTGGCAAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRTGLCV*FLASWV
Trigger: GACCCAACTTGCCAGAAATCAGACACAGAGGCCGGT...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp ATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGCTCCAAGTTGGATTTTaGCTTCATCTCTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: MEGNLCLPPLLAERGSGVLQVGF*LHLLQL
Trigger: CAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAG...CACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGCCTCGCCACCAGGCCTaGAGCTTTATAACGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQPRHQA*SFITLF
Trigger: AAAGAGCGTTATAAAGCTCCAGGCCTGGTGGCGAGG...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTTTTGGAGGAAGGTTTaGGTCTTCCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPFWRKV*VFQAVF
Trigger: GAAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGTGGTTCGCCTGTCACTaGCACCGTCATCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRWFACH*HRHLRM
Trigger: CATTCTGAGATGACGGTGTCAGTGACAGGCGAACCA...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGACTGGGTATTTTTGTaGTTGTTGAGGCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: LPIEMEGNLCLPPLLAERDWVFL*LLRPLE
Trigger: TTCCAATGGCCTCAACAATCACAAAAATACCCAGTC...CCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGCTTCCCAGCAAGGTATaGGGAAGCCCTAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQLPSKV*GSPKSM
Trigger: CATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAG...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCACTTCCCAGCAAGGTATaGGGAAGCCCTAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSLPSKV*GSPKSM
Trigger: CATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAG...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCCCCCCTTATCTCAGGTaGAGTGGCAATTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLPPYLR*SGNSWL
Trigger: CAGCCAAGAATTGCCACTGCACCTGAGATAAGGGGG...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR GCA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTTTGAAGACAAGATCCTaGATTTTGTTAAACTCCACA +
Preference number: 4 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPLKTRS*ILLNST
Trigger: TGTGGAGTTTAACAAAATGCAGGATCTTGTCTTCAA...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp TCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCCTCTGGACTTCAAATTaGCATTCCTTTTTGACATTA +
Preference number: 4 (lower is better)
Translates to: SSGGAVADRDGGKSLSPSLWTSN*HSFLTL
Trigger: TAATGTCAAAAAGGAATGGCAATTTGAAGTCCAGAG...GGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR GCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGTGGGTCTGGGCAATCTaGAGCTCGGTATTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQWVWAI*SSVLVF
Trigger: GAAAACCAATACCGAGCTGCAGATTGCCCAGACCCA...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTCTGTGTCTGATTTCTaGCAAGTTGGGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPSVSDF*QVGSFL
Trigger: GAGGAAGGACCCAACTTGCCAGAAATCAGACACAGA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp ATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGTTCATCTCTTGCAGTTaGTCCTTGAGGTTAGCAATA +
Preference number: 4 (lower is better)
Translates to: MEGNLCLPPLLAERGSGVFISCS*SLRLAI
Trigger: TATTGCTAACCTCAAGGACCAACTGCAAGAGATGAA...CACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp CTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGTCTGCAGCTCGGTATTaGTTTTCATGTAGCGATTCT +
Preference number: 4 (lower is better)
Translates to: LLPIEMEGNLCLPPLLAESAARY*FSCSDS
Trigger: AGAATCGCTACATGAAAACCAATACCGAGCTGCAGA...CTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGCCTCGCCACCAGGCCTaGAGCTTTATAACGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRPRHQA*SFITLF
Trigger: AAAGAGCGTTATAAAGCTCCAGGCCTGGTGGCGAGG...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGAACTGCCTATCAATCTaGATTTTCTTCAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPIEMEGNLCLPPLLAERNCLSI*IFFSVS
Trigger: GGAGACACTGAAGAAAATTCAGATTGATAGGCAGTT...CCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp TTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGCAATATACTCATTCTaGCTCTGGACTTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: LPIEMEGNLCLPPLLAERAIYSF*LWTSNC
Trigger: GCAATTTGAAGTCCAGAGTCAGAATGAGTATATTGC...CCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGATCTTTGCCAGGTCTTaGAGGTGTGCTAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQIFARS*RCAKSL
Trigger: CAGTGACTTAGCACACCTTCAAGACCTGGCAAAGAT...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACATCTTTGCCAGGTCTTaGAGGTGTGCTAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: EALSQWCNPKSGFENPPNIFARS*RCAKSL
Trigger: CAGTGACTTAGCACACCTTCAAGACCTGGCAAAGAT...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGTGGGTCTGGGCAATCTaGAGCTCGGTATTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRWVWAI*SSVLVF
Trigger: GAAAACCAATACCGAGCTGCAGATTGCCCAGACCCA...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAAGTGTCATGAGCCACTaGGATTTGTCCCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSSVMSH*DLSQFP
Trigger: GGGAAATTGGGACAAATCCCAGTGGCTCATGACACT...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CCA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACTTCAGAATAGAGAGCTaGTCTGTGGTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EALSQWCNPKSGFENPPNFRIES*SVVSSR
Trigger: TCTGGAGGACACCACAGACCAGCTCTCTATTCTGAA...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp CTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGCGATTCTCCAAGTTaGATTTTGCCTTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: LLPIEMEGNLCLPPLLAESDSPS*ILPSSL
Trigger: AAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCT...CTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTCACTTTTTCTGGGTCTaGGCAATCTGCAGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIHFFWV*AICSSV
Trigger: TACCGAGCTGCAGATTGCCCAGACCCAGAAAAAGTG...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGCTGTTACACTTTTTCTaGGTCTGGGCAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQLLHFF*VWAICS
Trigger: GCTGCAGATTGCCCAGACCCAGAAAAAGTGTAACAG...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCTACTTCTTAGTGTCATaGGCCACTGGGATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLYFLVS*ATGICP
Trigger: GGGACAAATCCCAGTGGCTCATGACACTAAGAAGTA...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGCTATTCAATTCCCGTTaGATGACTTCCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQLFNSR*MTSSSV
Trigger: CACTGAGCTGGAAGTCATTCAACGGGAATTGAATAG...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR TCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTGGCCTTTGTGGCTTTaGGAGCATTTAGTTCATTCT +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPWPLWL*EHLVHS
Trigger: AGAATGAACTAAATGCTCTCAAAGCCACAAAGGCCA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGTGTTTTCCCTCTCTTTaGTCAAAGCTTGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQCFPSL*SKLAGD
Trigger: GTCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACA...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCACTCTCTTATCATCTTTaGCAGGTCTTGAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSLSYHL*QVLKVC
Trigger: GCACACCTTCAAGACCTGGCAAAGATGATAAGAGAG...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTCTCTCCTCTTATCCTTaGCTTTACCTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPLSSYP*LYLCLL
Trigger: CAAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAG...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACTTGGTCACTTCTTCTTaGCTCTCCTCTTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: EALSQWCNPKSGFENPPNLVTSS*LSSYPC
Trigger: GCAAGGATAAGAGGAGAGGCAAGAAGAAGTGACCAA...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTGTACGTCTAAACACCTaGCACCTAGTAGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIVRLNT*HLVGAC
Trigger: ACATGCACCTACTAGGTGCCAGGTGTTTAGACGTAC...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCTTCAGAATAGAGAGCTaGTCTGTGGTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLFRIES*SVVSSR
Trigger: TCTGGAGGACACCACAGACCAGCTCTCTATTCTGAA...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTTCTGTGTCTGATTTCTaGCAAGTTGGGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEISVSDF*QVGSFL
Trigger: GAGGAAGGACCCAACTTGCCAGAAATCAGACACAGA...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTGGAGACTGTTGTAAGTaGCCGAATCTTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIGDCCK*PNLATP
Trigger: AGGAGTTGCAAGATTCGGCCACTTACAACAGTCTCC...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCGGAGACTGTTGTAAGTaGCCGAATCTTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLGDCCK*PNLATP
Trigger: AGGAGTTGCAAGATTCGGCCACTTACAACAGTCTCC...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCCTGTTACACTTTTTCTaGGTCTGGGCAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLLLHFF*VWAICS
Trigger: GCTGCAGATTGCCCAGACCCAGAAAAAGTGTAACAG...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTTACAGAGGACTACACTaGAAGATTTTGCAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFYRGLH*KILQRV
Trigger: AACCCTCTGCAAAATCTTTCAGTGTAGTCCTCTGTA...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGGACTGGGTATTTTTGTaGTTGTTGAGGCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQDWVFL*LLRPLE
Trigger: TTCCAATGGCCTCAACAATCACAAAAATACCCAGTC...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCACTTCGGTTTTCATCCTaGGTTTCTCAATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSLRFSS*VSQSLP
Trigger: TGGAAGAGATTGAGAAACTCAGGATGAAAACCGAAG...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGTGGCCTTTGTGGCTTTaGGAGCATTTAGTTCATTCT +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQWPLWL*EHLVHS
Trigger: AGAATGAACTAAATGCTCTCAAAGCCACAAAGGCCA...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACGAAACAACCTGTAGATaGGTCATCTTTGAGGTACCA +
Preference number: 4 (lower is better)
Translates to: EALSQWCNPKSGFENPPNETTCR*VIFEVP
Trigger: TGGTACCTCAAAGATGACTCATCTACAGGTTGTTTC...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTACTCCTTTGTTCTGCTaGGAAAGAGCAAGAAGAATG +
Preference number: 4 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFTPLFC*ERARRM
Trigger: CATTCTTCTTGCTCTTTCTCAGCAGAACAAAGGAGT...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTTTTGCCTTCATCTCTTaGAGTTGGTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFFAFIS*SWSLRL
Trigger: TAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAA...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACTTTGCCTTCATCTCTTaGAGTTGGTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: EALSQWCNPKSGFENPPNFAFIS*SWSLRL
Trigger: TAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAA...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACCTCCAAGTTGGATTTTaGCTTCATCTCTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: EALSQWCNPKSGFENPPNLQVGF*LHLLQL
Trigger: CAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAG...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCCTCTCTTATCATCTTTaGCAGGTCTTGAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLLSYHL*QVLKVC
Trigger: GCACACCTTCAAGACCTGGCAAAGATGATAAGAGAG...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTCTCTCCTCTTATCCTTaGCTTTACCTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFLSSYP*LYLCLL
Trigger: CAAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAG...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTGTGGCAATTCTTGGCTaGAAACTTTTCATACAGAGG +
Preference number: 4 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFVAILG*KLFIQR
Trigger: CCTCTGTATGAAAAGTTTCCAGCCAAGAATTGCCAC...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTGCAGTGGCAATTCTTaGCTGGAAACTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPCSGNS*LETFHT
Trigger: TGTATGAAAAGTTTCCAGCCAAGAATTGCCACTGCA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCATCTGCAGCTCGGTATTaGTTTTCATGTAGCGATTCT +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSSAARY*FSCSDS
Trigger: AGAATCGCTACATGAAAACCAATACCGAGCTGCAGA...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTACACAAAAGAGAACTTaGTCACTTCTTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPTQKRT*SLLLAS
Trigger: AGAGGCAAGAAGAAGTGACCAAGTTCTCTTTTGTGT...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGAAGCCCTAAGTCAATaGTGTAATCCTAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSEALSQ*CNPKSG
Trigger: CCCTGATTTAGGATTACACCATTGACTTAGGGCTTC...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGGACTGGGTATTTTTGTaGTTGTTGAGGCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRDWVFL*LLRPLE
Trigger: TTCCAATGGCCTCAACAATCACAAAAATACCCAGTC...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAACTGCCTATCAATCTaGATTTTCTTCAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQNCLSI*IFFSVS
Trigger: GGAGACACTGAAGAAAATTCAGATTGATAGGCAGTT...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCCTGCAATCACATCGCTaGAAAACTGCCTATCAATCT +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLLQSHR*KTAYQS
Trigger: AGATTGATAGGCAGTTTTTCAGCGATGTGATTGCAG...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGCTTCGGTTTTCATCCTaGGTTTCTCAATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRLRFSS*VSQSLP
Trigger: TGGAAGAGATTGAGAAACTCAGGATGAAAACCGAAG...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCGAAACAACCTGTAGATaGGTCATCTTTGAGGTACCA +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLETTCR*VIFEVP
Trigger: TGGTACCTCAAAGATGACTCATCTACAGGTTGTTTC...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAAAGAGCAAGAAGAATaGATCTTCACAGGACTACTA +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPKEQEE*IFTGLL
Trigger: TAGTAGTCCTGTGAAGATTCATTCTTCTTGCTCTTT...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCACTAGATTCATTTCTCTaGTTTTCACGCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSLDSFL*FSRRCS
Trigger: AGAGCATCTGCGTGAAAAGCAGAGAAATGAATCTAG...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTGTTTTCCCTCTCTTTaGTCAAAGCTTGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNCFPSL*SKLAGD
Trigger: GTCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACA...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGCTCCAAGTTGGATTTTaGCTTCATCTCTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRLQVGF*LHLLQL
Trigger: CAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAG...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACTCCTCAAGTTTCTGCTaGTCCTTTCTAAGGAACATT +
Preference number: 4 (lower is better)
Translates to: EALSQWCNPKSGFENPPNSSSFC*SFLRNI
Trigger: AATGTTCCTTAGAAAGGAGCAGCAGAAACTTGAGGA...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCATTACTCAAGTTTCAATaGGTCACTGTAGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSLLKFQ*VTVAKP
Trigger: TGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAA...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCATTCATCTCTTGCAGTTaGTCCTTGAGGTTAGCAATA +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSFISCS*SLRLAI
Trigger: TATTGCTAACCTCAAGGACCAACTGCAAGAGATGAA...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGCGATTCTCCAAGTTaGATTTTGCCTTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQSDSPS*ILPSSL
Trigger: AAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCT...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGGAAATCAGGCTTCCCTaGGAAAGTCTCAATAGGAAA +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIREIRLP*ESLNRK
Trigger: TTTCCTATTGAGACTTTCCCAGGGAAGCCTGATTTC...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCAACTGCCTATCAATCTaGATTTTCTTCAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLNCLSI*IFFSVS
Trigger: GGAGACACTGAAGAAAATTCAGATTGATAGGCAGTT...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCGCAATATACTCATTCTaGCTCTGGACTTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLAIYSF*LWTSNC
Trigger: GCAATTTGAAGTCCAGAGTCAGAATGAGTATATTGC...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAAAGAGCAAGAAGAATaGATCTTCACAGGACTACTA +
Preference number: 4 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQKEQEE*IFTGLL
Trigger: TAGTAGTCCTGTGAAGATTCATTCTTCTTGCTCTTT...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR TCA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACACTCCTTTGTTCTGCTaGGAAAGAGCAAGAAGAATG +
Preference number: 4 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNTPLFC*ERARRM
Trigger: CATTCTTCTTGCTCTTTCTCAGCAGAACAAAGGAGT...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCATACACTGAAAGATTTTaGAGAGGGTTGTATGTACGT +
Preference number: 4 (lower is better)
Translates to: FFPARYEEALSQWCNPKSYTERF*RGLYVR
Trigger: ACGTACATACAACCCTCTGCAAAATCTTTCAGTGTA...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR GCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCCTAGATTCATTTCTCTaGTTTTCACGCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLLDSFL*FSRRCS
Trigger: AGAGCATCTGCGTGAAAAGCAGAGAAATGAATCTAG...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTTGAAGACAAGATCCTaGATTTTGTTAAACTCCACA +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPLKTRS*ILLNST
Trigger: TGTGGAGTTTAACAAAATGCAGGATCTTGTCTTCAA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTTCCTCAAGTTTCTGCTaGTCCTTTCTAAGGAACATT +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEISSSFC*SFLRNI
Trigger: AATGTTCCTTAGAAAGGAGCAGCAGAAACTTGAGGA...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTCCTTGCCTTTACCTTTaGCTTTTGAATCCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIPCLYL*LLNPCY
Trigger: ATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGG...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTTTACTCAAGTTTCAATaGGTCACTGTAGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEILLKFQ*VTVAKP
Trigger: TGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAA...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTGCTGTGTATATATTATaGTGGACAGCTAATAACATC +
Preference number: 4 (lower is better)
Translates to: EEALSQWCNPKSGFENPPAVYIL*WTANNI
Trigger: GATGTTATTAGCTGTCCAGCATAATATATACACAGC...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTAGTTTCCGGGATTTCTaGGATGATTTCTATGTCTGT +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEISFRDF*DDFYVC
Trigger: ACAGACATAGAAATCATCCCAGAAATCCCGGAAACT...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCAGTTTCCGGGATTTCTaGGATGATTTCTATGTCTGT +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLSFRDF*DDFYVC
Trigger: ACAGACATAGAAATCATCCCAGAAATCCCGGAAACT...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGTTCATCTCTTGCAGTTaGTCCTTGAGGTTAGCAATA +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRFISCS*SLRLAI
Trigger: TATTGCTAACCTCAAGGACCAACTGCAAGAGATGAA...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGAGCGATTCTCCAAGTTaGATTTTGCCTTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRSDSPS*ILPSSL
Trigger: AAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCT...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCACACAAAAGAGAACTTaGTCACTTCTTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLTQKRT*SLLLAS
Trigger: AGAGGCAAGAAGAAGTGACCAAGTTCTCTTTTGTGT...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACAAAGAACTGAAAAACTaGCTCAAGACACCCACATAC +
Preference number: 4 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNKELKN*LKTPTY
Trigger: GTATGTGGGTGTCTTGAGGCAGTTTTTCAGTTCTTT...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR GCA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACCCTTGCCTTTACCTTTaGCTTTTGAATCCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNPCLYL*LLNPCY
Trigger: ATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGG...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTCTTCGTTACCCTCCGTaGTATATTTATAATCTCACA +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEILRYPP*YIYNLT
Trigger: TGTGAGATTATAAATATACCACGGAGGGTAACGAAG...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGCTCTGGACTTCAAATTaGCATTCCTTTTTGACATTA +
Preference number: 4 (lower is better)
Translates to: FENPPNRQSEINRQSEIRLWTSN*HSFLTL
Trigger: TAATGTCAAAAAGGAATGGCAATTTGAAGTCCAGAG...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTGCTGTGTATATATTATaGTGGACAGCTAATAACATC +
Preference number: 4 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIAVYIL*WTANNI
Trigger: GATGTTATTAGCTGTCCAGCATAATATATACACAGC...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR GCA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACCTCTGGACTTCAAATTaGCATTCCTTTTTGACATTA +
Preference number: 4 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNLWTSN*HSFLTL
Trigger: TAATGTCAAAAAGGAATGGCAATTTGAAGTCCAGAG...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS GCA 90 bp TTCGCGCCACGAGACGCGATGGACGTGATCGCCGCCCTCATCTTCTaGGGCGAACTTCTAGCGGGTGACGCTGTCCAATCGGAAAGCGCC +
Preference number: 5 (lower is better)
Translates to: FAPRDAMDVIAALIF*GELLAGDAVQSESA
Trigger: GGCGCTTTCCGATTGGACAGCGTCACCCGCTAGAAGTTCGCCGCAGAAGATGAGGGCGGCGATCACGTCCATCGCGTCTCGTGGCGCGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480302.5
CDS GCA 90 bp GGGATCCCGGGCTTTCAGTTCCCTGCAACTCCTGTTCACCAACACTaGAGAGCCACGTGGCGCGGCACTGTGTGGACTGCGTGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: GIPGFQFPATPVHQH*RATWRGTVWTACVP
Trigger: AGGGACACACGCAGTCCACACAGTGCCGCGCCACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGGGAACTGAAAGCCCGGGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469822.1
ENST00000478903.5
ENST00000485787.1
CDS GCA 90 bp GCTGAGGCTCCCTTTACCAGCTGGGATCCCGGGCTTTCAGTTCCCTaGAACTCCTGTTCACCAACACTGCAGAGCCACGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: AEAPFTSWDPGLSVP*NSCSPTLQSHVARH
Trigger: GTGCCGCGCCACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGGGAACTGAAAGCCCGGGATCCCAGCTGGTAAAGGGAGCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469822.1
ENST00000478903.5
CDS TCA 90 bp CTAACGAGACGAGCACAATCCCGTGAGCTGAACAGAGGTGCCCACTaGAGGACAGAAACGGCGCTCCAAGGGCACAAGGCTGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LTRRAQSRELNRGAH*RTETALQGHKAVGL
Trigger: AAGCCCCACAGCCTTGTGCCCTTGGAGCGCCGTTTCTGTCCTTCAGTGGGCACCTCTGTTCAGCTCACGGGATTGTGCTCGTCTCGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478903.5
CDS CCA 90 bp TTTCAGTTCCCTGCAACTCCTGTTCACCAACACTGCAGAGCCACGTaGCGCGGCACTGTGTGGACTGCGTGTGTCCCTAACGAGACGAGC +
Preference number: 5 (lower is better)
Translates to: FQFPATPVHQHCRAT*RGTVWTACVPNETS
Trigger: GCTCGTCTCGTTAGGGACACACGCAGTCCACACAGTGCCGCGCCACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGGGAACTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478903.5
ENST00000485787.1
CDS TCA 90 bp ACTGTGTGGACTGCGTGTGTCCCTAACGAGACGAGCACAATCCCGTaGGCTGAACAGAGGTGCCCACTGAAGGACAGAAACGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: TVWTACVPNETSTIP*AEQRCPLKDRNGAP
Trigger: TGGAGCGCCGTTTCTGTCCTTCAGTGGGCACCTCTGTTCAGCTCACGGGATTGTGCTCGTCTCGTTAGGGACACACGCAGTCCACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478903.5
ENST00000485787.1
CDS GCA 90 bp GTTTTCATCCTGAGTTTCAGCTGGGATCCCGGGCTTTCAGTTCCCTaGAACTCCTGTTCACCAACACTGCAGAGCCACGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: VFILSFSWDPGLSVP*NSCSPTLQSHVARH
Trigger: GTGCCGCGCCACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGGGAACTGAAAGCCCGGGATCCCAGCTGAAACTCAGGATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485787.1
CDS TCA 90 bp AAAAAGGGGGATTCCGGAGTGCCAGGAAGAGTGTTGACGTGGCCTTaGGCCACGTCAGTCTCAGAGCGAGGAGTCCTCCCACACACAGAT +
Preference number: 5 (lower is better)
Translates to: KKGDSGVPGRVLTWP*ATSVSERGVLPHTD
Trigger: ATCTGTGTGTGGGAGGACTCCTCGCTCTGAGACTGACGTGGCTCAAGGCCACGTCAACACTCTTCCTGGCACTCCGGAATCCCCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478903.5
CDS-3UTR CAA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTGGAGTGACAGCTCAATaGCCATCTCCTGGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPGVTAQ*PSPGFL
Trigger: CAAGAACCCAGGAGATGGCAATTGAGCTGTCACTCC...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp GGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTCAAGTGGAGGGGCTGTaGCCGATAGAGATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GLLPIEMEGNLCLPPLLAQVEGL*PIEMEG
Trigger: TCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTG...AGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS CCA 90 bp TCCCCCAGAGGTCCCTCTGTCACACTGGCAGTTCTAAGAAAGGTTTaGTCAGTCCAATGGTGGTATGCAAGCCAAAGCTGCCATTGTTGG +
Preference number: 5 (lower is better)
Translates to: SPRGPSVTLAVLRKV*SVQWWYASQSCHCW
Trigger: CCAACAATGGCAGCTTTGGCTTGCATACCACCATTGGACTGACCAAACCTTTCTTAGAACTGCCAGTGTGACAGAGGGACCTCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp CAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTCTTTGTCTCCCTCCTTaGTTAGCTGAGAGGGGATCA +
Preference number: 5 (lower is better)
Translates to: QVEGLLPIEMEGNLCLPPLCLPP*LAERGS
Trigger: TGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAG...AGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS TCA 90 bp GCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTaGGAGGGGATCAGGAGTGACAGCTCAATTGCCATCTCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: ADRDGGKSLSPSFVS*EGIRSDSSIAISWV
Trigger: AACCCAGGAGATGGCAATTGAGCTGTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS GCA 90 bp TCACCGTTGCCAAAGGAGGAGTCCTGTGGTTTACAGGAAAGGGCTTaGGTGGCTGGTAACTTGTCCACTACACCATTGAAACAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SPLPKEESCGLQERA*VAGNLSTTPLKQLC
Trigger: GCAAAGCTGTTTCAATGGTGTAGTGGACAAGTTACCAGCCACGCAAGCCCTTTCCTGTAAACCACAGGACTCCTCCTTTGGCAACGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCTTTTGGAGGAAGGTTaGAGTCTTCCAGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPLLEEG*SLPGCL
Trigger: AAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAAG...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp GAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGACACCATCTCCTGGGTTCTaGGCTAATGTCCCAGGGATT +
Preference number: 5 (lower is better)
Translates to: EGNLCLPPLLAERGSGVTPSPGF*ANVPGI
Trigger: AATCCCTGGGACATTAGCCAAGAACCCAGGAGATGG...TGTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp GTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGGATGGAGGGAAATCTTaGTCTCCCTCCTTTGTTAGC +
Preference number: 5 (lower is better)
Translates to: VEGLLPIEMEGNLCLPPLDGGKS*SPSFVS
Trigger: GCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATC...CAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS TCA 90 bp CCTGTTACAAATCTGCTAACCTACAAAGAGGGTAGTGAGATATACTaGCCCAAGAGAAAGCAAGACGCCCTCCCCCAGAGGTCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PVTNLLTYKEGSEIY*PKRKQDALPQRSLC
Trigger: ACAGAGGGACCTCTGGGGGAGGGCGTCTTGCTTTCTCTTGGGTCAGTATATCTCACTACCCTCTTTGTAGGTTAGCAGATTTGTAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTGAGGCCATTGGAAGTTaGTCTAGATTCGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPEAIGS*SRFVPS
Trigger: AGAAGGAACGAATCTAGACAAACTTCCAATGGCCTC...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp GTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGCTGATTTCTGGCAAGTaGGGTCCTTCCTCAGTTATT +
Preference number: 5 (lower is better)
Translates to: VEGLLPIEMEGNLCLPPLLISGK*GPSSVI
Trigger: AATAACTGAGGAAGGACCCAACTTGCCAGAAATCAG...CAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp GTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGCTCTTTGCTCAAAGCTaGCAGGAGACTGTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: VEGLLPIEMEGNLCLPPLLFAQS*QETVVS
Trigger: ACTTACAACAGTCTCCTGCAAGCTTTGAGCAAAGAG...CAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTACAAGATCCTGCATTTaGTTAAACTCCACAGCGAAC +
Preference number: 5 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPTRSCI*LNSTAN
Trigger: GTTCGCTGTGGAGTTTAACAAAATGCAGGATCTTGT...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp CCTCAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTTCTTGCAGTTGGTCCTaGAGGTTAGCAATATACTCA +
Preference number: 5 (lower is better)
Translates to: PQVEGLLPIEMEGNLCLPSCSWS*RLAIYS
Trigger: TGAGTATATTGCTAACCTCAAGGACCAACTGCAAGA...AGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp CAAGTGGAGGGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTCTCCAAGTTGGATTTaGCCTTCATCTCTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: QVEGLLPIEMEGNLCLPPSPSWI*PSSLAV
Trigger: AACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGA...AGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCCCTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS CCA 90 bp ACAGATGGGTATTTCAGGTCTGGGTTAGGCATATGGAGAAGTGGATaGTATTCTGAGTGGAACAGACACACGGTAAGTGGTAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: TDGYFRSGLGIWRSG*YSEWNRHTVSGRHL
Trigger: CAGATGCCTACCACTTACCGTGTGTCTGTTCCACTCAGAATACCATCCACTTCTCCATATGCCTAACCCAGACCTGAAATACCCATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp GGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTTTGTTTTCCCTCTCTTaGCTCAAAGCTTGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GLLPIEMEGNLCLPPLLALFSLS*LKACRR
Trigger: TCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACAA...AGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp CCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGACTTCATCTCTTGCAGTaGGTCCTTGAGGTTAGCAAT +
Preference number: 5 (lower is better)
Translates to: PIEMEGNLCLPPLLAERGLHLLQ*VLEVSN
Trigger: ATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAG...TCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp ATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGAGGGGATCAGGAGTGTTTTGCCTTCATCTCTaGCAGTTGGTCCTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: MEGNLCLPPLLAERGSGVFCLHL*QLVLEV
Trigger: AACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAA...CACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS-3UTR CAA 90 bp CTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTGAGGTAAGTGGCCGAATCTaGCAACTCCTTAATGGTATC +
Preference number: 5 (lower is better)
Translates to: LLPIEMEGNLCLPPLLAEVSGRI*QLLNGI
Trigger: GATACCATTAAGGAGTTGCAAGATTCGGCCACTTAC...CTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS TCA 90 bp TTTCAATCTCTGTATGAGTCCGGGCCTCTTCTTCGGTTTTCATCCTaGGTTTCTGTAAGAACAATCAGATACCAGTACGTCTTCCCCGCA +
Preference number: 5 (lower is better)
Translates to: FQSLYESGPLLRFSS*VSVRTIRYQYVFPA
Trigger: TGCGGGGAAGACGTACTGGTATCTGATTGTTCTTACAGAAACTCAGGATGAAAACCGAAGAAGAGGCCCGGACTCATACAGAGATTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469822.1
ENST00000478903.5
CDS TCA 90 bp TCAAGTTTCTGCTGCTCCTTTCTAAGGAACATTTCAATCTCTGTATaGGTCCGGGCCTCTTCTTCGGTTTTCATCCTGAGTTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSFCCSFLRNISISV*VRASSSVFILSFSW
Trigger: CCAGCTGAAACTCAGGATGAAAACCGAAGAAGAGGCCCGGACTCATACAGAGATTGAAATGTTCCTTAGAAAGGAGCAGCAGAAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485787.1
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTCTTTTGGAGGAAGGTTaGAGTCTTCCAGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPLLEEG*SLPGCL
Trigger: AAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAAG...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS TCA 90 bp AATGAAATTGAACTTGGGAATTACGCAGTCAGCGCGAGGAAGTGCTaGTCTTGGACACCCACTCCAAAAGGCCAACATAAGCTAAAAGTA +
Preference number: 5 (lower is better)
Translates to: NEIELGNYAVSARKC*SWTPTPKGQHKLKV
Trigger: TACTTTTAGCTTATGTTGGCCTTTTGGAGTGGGTGTCCAAGATCAGCACTTCCTCGCGCTGACTGCGTAATTCCCAAGTTCAATTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS GCA 90 bp CTCTTCCATGCTAGATTAGGATCCCAGAATTTCCGTTCTGTCTATTaGTGTGTGTATCGAGAGAAAAGCACCCCACTGTTGGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: LFHARLGSQNFRSVY*CVYREKSTPLLANQ
Trigger: TTGATTTGCCAACAGTGGGGTGCTTTTCTCTCGATACACACAGCAATAGACAGAACGGAAATTCTGGGATCCTAATCTAGCATGGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452735.1
CDS CCA 90 bp GTTCTGTCTATTGCTGTGTGTATCGAGAGAAAAGCACCCCACTGTTaGCAAATCAATCTTACAGTCAATCATTCTTTAGGCAGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: VLSIAVCIERKAPHC*QINLTVNHSLGSGN
Trigger: GTTCCCGCTGCCTAAAGAATGATTGACTGTAAGATTGATTTGCCAACAGTGGGGTGCTTTTCTCTCGATACACACAGCAATAGACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452735.1
CDS CCA 90 bp GGAAGCTGTAAGATGTTAACCTGTGGACATATCCATGAAGACAGATaGGTATTTCAGGTCTGGGTTAGGCATATGGAGAAGTGGATGGTA +
Preference number: 5 (lower is better)
Translates to: GSCKMLTCGHIHEDR*VFQVWVRHMEKWMV
Trigger: TACCATCCACTTCTCCATATGCCTAACCCAGACCTGAAATACCCATCTGTCTTCATGGATATGTCCACAGGTTAACATCTTACAGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTGTGCAGTGGCAATTCTaGGCTGGAAACTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPVQWQF*AGNFSY
Trigger: GTATGAAAAGTTTCCAGCCAAGAATTGCCACTGCAC...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTGAGGCCATTGGAAGTTaGTCTAGATTCGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPEAIGS*SRFVPS
Trigger: AGAAGGAACGAATCTAGACAAACTTCCAATGGCCTC...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTGTAAGTGGCCGAATCTaGCAACTCCTTAATGGTATC +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPVSGRI*QLLNGI
Trigger: GATACCATTAAGGAGTTGCAAGATTCGGCCACTTAC...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTCTCTTTGCTCAAAGCTaGCAGGAGACTGTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPLFAQS*QETVVS
Trigger: ACTTACAACAGTCTCCTGCAAGCTTTGAGCAAAGAG...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTTGTTTTCCCTCTCTTaGCTCAAAGCTTGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPLFSLS*LKACRR
Trigger: TCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACAA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTTGTTAGCTACTCTGGACTTCAAATaGCCATTCCTTTTTGACATT +
Preference number: 5 (lower is better)
Translates to: GLLPIEMEGNLCLPPLLATLDFK*PFLFDI
Trigger: AATGTCAAAAAGGAATGGCAATTTGAAGTCCAGAGT...AGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS TCA 90 bp TCAAGTTTCTGCTGCTCCTTTCTAAGGAACATTTCAATCTCTGTATaGGTCCGGGCCTCTTCTTCGGTTTTCATCCTGAGTTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: SSFCCSFLRNISISV*VRASSSVFILSFSI
Trigger: GATTGAGAAACTCAGGATGAAAACCGAAGAAGAGGCCCGGACTCATACAGAGATTGAAATGTTCCTTAGAAAGGAGCAGCAGAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265239.11
ENST00000455191.5
ENST00000490748.5
CDS TCA 90 bp TCAAGTTTCTGCTGCTCCTTTCTAAGGAACATTTCAATCTCTGTATaGGTCCGGGCCTCTTCTTCGGTTTTCATCCTGAGTTTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: SSFCCSFLRNISISV*VRASSSVFILSFCK
Trigger: CTTACAGAAACTCAGGATGAAAACCGAAGAAGAGGCCCGGACTCATACAGAGATTGAAATGTTCCTTAGAAAGGAGCAGCAGAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478903.5
CDS GCA 90 bp CAGCTCGGTATTGGTTTTCATGTAGCGATTCTCCAAGTTGGATTTTaGCTTCATCTCTTGCAGTTGGTCCTTGAGGTTAGCAATATACTC +
Preference number: 5 (lower is better)
Translates to: QLGIGFHVAILQVGF*LHLLQLVLEVSNIL
Trigger: GAGTATATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCTACATGAAAACCAATACCGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000453254.5
ENST00000455191.5
ENST00000473225.1
ENST00000490748.5
CDS CCA 90 bp TTGTGGTATTGTAGTGGAAAGGGCACGTTTCCTAAGTTACAAATGTaGTTTGGAATCCCACCTTCCACTAGTTGTGGGATGATACACACA +
Preference number: 5 (lower is better)
Translates to: LWYCSGKGTFPKLQM*FGIPPSTSCGMIHT
Trigger: TGTGTGTATCATCCCACAACTAGTGGAAGGTGGGATTCCAAACCACATTTGTAACTTAGGAAACGTGCCCTTTCCACTACAATACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACTCCCAATTTCCCATTTaGTATAGTTCCTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: EALSQWCNPKSGFENPPNSQFPI*YSSSRL
Trigger: GAGCCGTGAGGAACTATACAAAATGGGAAATTGGGA...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CAA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGATGAGCCACTGGGATTaGTCCCAATTTCCCATTTTG +
Preference number: 5 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQMSHWD*SQFPIL
Trigger: CAAAATGGGAAATTGGGACAAATCCCAGTGGCTCAT...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CAA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACCCTATTCAATTCCCGTaGAATGACTTCCAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: EALSQWCNPKSGFENPPNPIQFP*NDFQLS
Trigger: ACTGAGCTGGAAGTCATTCAACGGGAATTGAATAGG...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CAA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTCTGATTTCTGGCAAGTaGGGTCCTTCCTCAGTTATT +
Preference number: 5 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFLISGK*GPSSVI
Trigger: AATAACTGAGGAAGGACCCAACTTGCCAGAAATCAG...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGCTGATTTCTGGCAAGTaGGGTCCTTCCTCAGTTATT +
Preference number: 5 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQLISGK*GPSSVI
Trigger: AATAACTGAGGAAGGACCCAACTTGCCAGAAATCAG...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTACAAGATCCTGCATTTaGTTAAACTCCACAGCGAAC +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPTRSCI*LNSTAN
Trigger: GTTCGCTGTGGAGTTTAACAAAATGCAGGATCTTGT...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTCTCTTTGCTCAAAGCTaGCAGGAGACTGTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFLFAQS*QETVVS
Trigger: ACTTACAACAGTCTCCTGCAAGCTTTGAGCAAAGAG...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACTTTTGCCTTCATCTCTaGCAGTTGGTCCTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: EALSQWCNPKSGFENPPNFCLHL*QLVLEV
Trigger: AACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAA...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTTCTCCAAGTTGGATTTaGCCTTCATCTCTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPSPSWI*PSSLAV
Trigger: AACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGA...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp CAGGAATTACTCAAGTTTCAATGCGTCACTGTAGCTAAGCCAGTGAACTCCTTTCCTCTCCTCTTATCCTaGCCTTTACCTTTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: QELLKFQCVTVAKPVNSFPLLLS*PLPLPF
Trigger: AAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAGG...AAAGGAGTTCACTGGCTTAGCTACAGTGACGCATTGAAACTTGAGTAATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAATCCTAAATCAGGGTTaGAAAACCCACCTAACAGGC +
Preference number: 5 (lower is better)
Translates to: FFPARYEEALSQWCNPKSILNQG*KTHLTG
Trigger: GCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGAT...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS TCA 90 bp GCAAGTTGGGTCCTTCCTCAGTTATTAACGGACTGGGTATTTTTGTaGTTGTTGAGGCCATTGGAAGTTTGTCTAGATTCGTTCCTTCTA +
Preference number: 5 (lower is better)
Translates to: ASWVLPQLLTDWVFL*LLRPLEVCLDSFLL
Trigger: TAGAAGGAACGAATCTAGACAAACTTCCAATGGCCTCAACAATCACAAAAATACCCAGTCCGTTAATAACTGAGGAAGGACCCAACTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000463651.1
ENST00000480302.5
ENST00000490748.5
CDS TCA 90 bp CTTCTTCTTGCCTCTCCTCTTATCCTTGCCTTTACCTTTGCCTTTTaGATCCTTGCTATCAACTTTGTCTTTAGGCATCTTGAAACCACC +
Preference number: 5 (lower is better)
Translates to: LLLASPLILAFTFAF*ILAINFVFRHLETT
Trigger: GGTGGTTTCAAGATGCCTAAAGACAAAGTTGATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAGGCAAGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000455191.5
ENST00000478903.5
ENST00000485787.1
ENST00000490748.5
CDS CCA 90 bp TCTCAAATGGAGAATTCTAACATGTTTCTGGCTTTGGGGGCTGGATaGATAATGGTGCATTTACAAAGTTGGGGAATCAGGAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: SQMENSNMFLALGAG*IMVHLQSWGIRRWF
Trigger: AAACCATCTCCTGATTCCCCAACTTTGTAAATGCACCATTATCCATCCAGCCCCCAAAGCCAGAAACATGTTAGAATTCTCCATTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGGAGGCCATTGGAAGTTaGTCTAGATTCGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: FENPPNRQSEINRQSEIREAIGS*SRFVPS
Trigger: AGAAGGAACGAATCTAGACAAACTTCCAATGGCCTC...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTGTAAGTGGCCGAATCTaGCAACTCCTTAATGGTATC +
Preference number: 5 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIVSGRI*QLLNGI
Trigger: GATACCATTAAGGAGTTGCAAGATTCGGCCACTTAC...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGTTGTTTTCCCTCTCTTaGCTCAAAGCTTGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: FENPPNRQSEINRQSEIRLFSLS*LKACRR
Trigger: TCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACAA...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TTCTTCCCAGCAAGGTATGAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCATCTTGCAGTTGGTCCTaGAGGTTAGCAATATACTCA +
Preference number: 5 (lower is better)
Translates to: FFPARYEEALSQWCNPKSSCSWS*RLAIYS
Trigger: TGAGTATATTGCTAACCTCAAGGACCAACTGCAAGA...TGATTTAGGATTACACCATTGACTTAGGGCTTCCTCATACCTTGCTGGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGTCTTGCAGTTGGTCCTaGAGGTTAGCAATATACTCA +
Preference number: 5 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQSCSWS*RLAIYS
Trigger: TGAGTATATTGCTAACCTCAAGGACCAACTGCAAGA...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGCTTCATCTCTTGCAGTaGGTCCTTGAGGTTAGCAAT +
Preference number: 5 (lower is better)
Translates to: FENPPNRQSEINRQSEIRLHLLQ*VLEVSN
Trigger: ATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAG...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp CTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGTCTCCAAGTTGGATTTaGCCTTCATCTCTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: LSQWCNPKSGFENPPNRQSPSWI*PSSLAV
Trigger: AACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGA...CTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAACACAAAAGAGAACTaGGTCACTTCTTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: EALSQWCNPKSGFENPPNNTKEN*VTSSCL
Trigger: GAGGCAAGAAGAAGTGACCAAGTTCTCTTTTGTGTT...GTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGATCCTAAATCAGGGTTaGAAAACCCACCTAACAGGC +
Preference number: 5 (lower is better)
Translates to: FENPPNRQSEINRQSEIRILNQG*KTHLTG
Trigger: GCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGAT...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCAGATTTTGCAGAGGGTaGTATGTACGTCTAAACACC +
Preference number: 5 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLRFCRG*YVRLNT
Trigger: GGTGTTTAGACGTACATACAACCCTCTGCAAAATCT...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265239.11
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTACTCTGGACTTCAAATaGCCATTCCTTTTTGACATT +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPTLDFK*PFLFDI
Trigger: AATGTCAAAAAGGAATGGCAATTTGAAGTCCAGAGT...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACCTTCATCTCTTGCAGTaGGTCCTTGAGGTTAGCAAT +
Preference number: 5 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNLHLLQ*VLEVSN
Trigger: ATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAG...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTTTTGCCTTCATCTCTaGCAGTTGGTCCTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNFCLHL*QLVLEV
Trigger: AACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAA...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACCTGGCCTTTGTGGCTTaGAGAGCATTTAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNLAFVA*RAFSSF
Trigger: GAATGAACTAAATGCTCTCAAAGCCACAAAGGCCAG...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp GAGGAAGCCCTAAGTCAATGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTCTTTACCTTTGCCTTTaGAATCCTTGCTATCAACTT +
Preference number: 5 (lower is better)
Translates to: EEALSQWCNPKSGFENPPLYLCL*NPCYQL
Trigger: AAGTTGATAGCAAGGATTCAAAAGGCAAAGGTAAAG...AGGTGGGTTTTCAAACCCTGATTTAGGATTACACCATTGACTTAGGGCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACACAAAAGAGAACTaGGTCACTTCTTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: WCNPKSGFENPPNRQSEINTKEN*VTSSCL
Trigger: GAGGCAAGAAGAAGTGACCAAGTTCTCTTTTGTGTT...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TGGTGTAATCCTAAATCAGGGTTTGAAAACCCACCTAACAGGCAGAGTGAAATTGTAGATGAGTCATCTTaGAGGTACCAGGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: WCNPKSGFENPPNRQSEIVDESS*RYQVFL
Trigger: AAGAAACACCTGGTACCTCAAAGATGACTCATCTAC...AATTTCACTCTGCCTGTTAGGTGGGTTTTCAAACCCTGATTTAGGATTACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS TCA 90 bp GGAAAGTCCAGAAAACTAAAATGCCACATGAGAGGTCTCCTGTACTaGACTGAGGATCTTAGGCTTAAGATTGTTCTTGAGTGTAATACA +
Preference number: 5 (lower is better)
Translates to: GKSRKLKCHMRGLLY*TEDLRLKIVLECNT
Trigger: TGTATTACACTCAAGAACAATCTTAAGCCTAAGATCCTCAGTTCAGTACAGGAGACCTCTCATGTGGCATTTTAGTTTTCTGGACTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS GCA 90 bp GAGACTGTTGTAAGTGGCCGAATCTTGCAACTCCTTAATGGTATCTaGAATCACATCGCTGAAAAACTGCCTATCAATCTGAATTTTCTT +
Preference number: 5 (lower is better)
Translates to: ETVVSGRILQLLNGI*NHIAEKLPINLNFL
Trigger: AAGAAAATTCAGATTGATAGGCAGTTTTTCAGCGATGTGATTGCAGATACCATTAAGGAGTTGCAAGATTCGGCCACTTACAACAGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CCA 90 bp TTTCAAATCCCAATGGCATCCCAGCATAAACAAGGGAAAATTAGGTaGGCTTTTCAGTCTCAAATGGAGAATTCTAACATGTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: FQIPMASQHKQGKIR*AFQSQMENSNMFLA
Trigger: AGCCAGAAACATGTTAGAATTCTCCATTTGAGACTGAAAAGCCCACCTAATTTTCCCTTGTTTATGCTGGGATGCCATTGGGATTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS-3UTR CAA 90 bp AATAGGAAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACACAAGATCCTGCATTTaGTTAAACTCCACAGCGAAC +
Preference number: 5 (lower is better)
Translates to: NRKQPVDESSLRYQVFLNTRSCI*LNSTAN
Trigger: GTTCGCTGTGGAGTTTAACAAAATGCAGGATCTTGT...GTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTTCCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp TTTGAAAACCCACCTAACAGGCAGAGTGAAATTAACAGGCAAAGTGAAATCAGGACTCTGGACTTCAAATaGCCATTCCTTTTTGACATT +
Preference number: 5 (lower is better)
Translates to: FENPPNRQSEINRQSEIRTLDFK*PFLFDI
Trigger: AATGTCAAAAAGGAATGGCAATTTGAAGTCCAGAGT...CCTGATTTCACTTTGCCTGTTAATTTCACTCTGCCTGTTAGGTGGGTTTTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS-3UTR CAA 90 bp AAACAACCTGTAGATGAGTCATCTTTGAGGTACCAGGTGTTTCTTAACTCTCTCCTTTACCTTTGCCTTTaGAATCCTTGCTATCAACTT +
Preference number: 5 (lower is better)
Translates to: KQPVDESSLRYQVFLNSLLYLCL*NPCYQL
Trigger: AAGTTGATAGCAAGGATTCAAAAGGCAAAGGTAAAG...GAGAGAGTTAAGAAACACCTGGTACCTCAAAGATGACTCATCTACAGGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000455191.5
CDS GCA 72 bp CGAGACGCGATGGACGTGATCGCCGCCCTCATCTTCTaGGGCGAACTTCTAGCGGGTGACGCTGTCCAATCG +
Preference number: 6 (lower is better)
Translates to: RDAMDVIAALIF*GELLAGDAVQS
Trigger: CGATTGGACAGCGTCACCCGCTAGAAGTTCGCCGCAGAAGATGAGGGCGGCGATCACGTCCATCGCGTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480302.5
CDS GCA 72 bp GGCTTTCAGTTCCCTGCAACTCCTGTTCACCAACACTaGAGAGCCACGTGGCGCGGCACTGTGTGGACTGCG +
Preference number: 6 (lower is better)
Translates to: GFQFPATPVHQH*RATWRGTVWTA
Trigger: CGCAGTCCACACAGTGCCGCGCCACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGGGAACTGAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469822.1
ENST00000478903.5
ENST00000485787.1
CDS CCA 72 bp CCTGCAACTCCTGTTCACCAACACTGCAGAGCCACGTaGCGCGGCACTGTGTGGACTGCGTGTGTCCCTAAC +
Preference number: 6 (lower is better)
Translates to: PATPVHQHCRAT*RGTVWTACVPN
Trigger: GTTAGGGACACACGCAGTCCACACAGTGCCGCGCCACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469822.1
ENST00000478903.5
ENST00000485787.1
CDS CCA 72 bp CACCAACACTGCAGAGCCACGTGGCGCGGCACTGTGTaGACTGCGTGTGTCCCTAACGAGACGAGCACAATC +
Preference number: 6 (lower is better)
Translates to: HQHCRATWRGTV*TACVPNETSTI
Trigger: GATTGTGCTCGTCTCGTTAGGGACACACGCAGTCCACACAGTGCCGCGCCACGTGGCTCTGCAGTGTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478903.5
ENST00000485787.1
CDS CAA 72 bp GGATTCCGGAGTGCCAGGAAGAGTGTTGACGTGGCCTaGAGCCACGTCAGTCTCAGAGCGAGGAGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: GFRSARKSVDVA*SHVSLRARSPP
Trigger: GGGAGGACTCCTCGCTCTGAGACTGACGTGGCTCAAGGCCACGTCAACACTCTTCCTGGCACTCCGGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478903.5
CDS TCA 72 bp GATTCCGGAGTGCCAGGAAGAGTGTTGACGTGGCCTTaGGCCACGTCAGTCTCAGAGCGAGGAGTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: DSGVPGRVLTWP*ATSVSERGVLP
Trigger: TGGGAGGACTCCTCGCTCTGAGACTGACGTGGCTCAAGGCCACGTCAACACTCTTCCTGGCACTCCGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478903.5
CDS TCA 72 bp CGAGCACAATCCCGTGAGCTGAACAGAGGTGCCCACTaGAGGACAGAAACGGCGCTCCAAGGGCACAAGGCT +
Preference number: 6 (lower is better)
Translates to: RAQSRELNRGAH*RTETALQGHKA
Trigger: AGCCTTGTGCCCTTGGAGCGCCGTTTCTGTCCTTCAGTGGGCACCTCTGTTCAGCTCACGGGATTGTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478903.5
ENST00000485787.1
CDS GCA 72 bp CCTCAACCTCAACCTCCTCGGCTCAGGCAAACCTCCTaGCTCAGCCTCCTAAATAGCTGGGGCCACAGGCAT +
Preference number: 6 (lower is better)
Translates to: PQPQPPRLRQTS*LSLLNSWGHRH
Trigger: ATGCCTGTGGCCCCAGCTATTTAGGAGGCTGAGGCAGGAGGTTTGCCTGAGCCGAGGAGGTTGAGGTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp AGGGCTTGCGTGGCTGGTAACTTGTCCACTACACCATaGAAACAGCTTTGCCTCCTGGCTGGGCGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: RACVAGNLSTTP*KQLCLLAGRGG
Trigger: GCCACCGCGCCCAGCCAGGAGGCAAAGCTGTTTCAATGGTGTAGTGGACAAGTTACCAGCCACGCAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS GCA 72 bp CCCTTTACCAGCTGGGATCCCGGGCTTTCAGTTCCCTaGAACTCCTGTTCACCAACACTGCAGAGCCACGTG +
Preference number: 6 (lower is better)
Translates to: PFTSWDPGLSVP*NSCSPTLQSHV
Trigger: CACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGGGAACTGAAAGCCCGGGATCCCAGCTGGTAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469822.1
ENST00000478903.5
CDS CCA 72 bp GAAGGACAGAAACGGCGCTCCAAGGGCACAAGGCTGTaGGGCTTAAAAAGGGGGATTCCGGAGTGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: EGQKRRSKGTRL*GLKRGIPECQE
Trigger: TTCCTGGCACTCCGGAATCCCCCTTTTTAAGCCCCACAGCCTTGTGCCCTTGGAGCGCCGTTTCTGTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478903.5
CDS TCA 72 bp CCTCGCCACCAGGCCTGGAGCATCTTTGCCAGGTCTTaGAGGTGTGCTAAGTCACTGGCCTTTGTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: PRHQAWSIFARS*RCAKSLAFVAL
Trigger: CAAAGCCACAAAGGCCAGTGACTTAGCACACCTTCAAGACCTGGCAAAGATGCTCCAGGCCTGGTGGCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485787.1
CDS GCA 72 bp CTGAGTTTCAGCTGGGATCCCGGGCTTTCAGTTCCCTaGAACTCCTGTTCACCAACACTGCAGAGCCACGTG +
Preference number: 6 (lower is better)
Translates to: LSFSWDPGLSVP*NSCSPTLQSHV
Trigger: CACGTGGCTCTGCAGTGTTGGTGAACAGGAGTTGCAGGGAACTGAAAGCCCGGGATCCCAGCTGAAACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485787.1
CDS CAA 90 bp GAGGAGTCCTGTGGTTTACAGGAAAGGGCTTGCGTGGCTGGTAACTaGTCCACTACACCATTGAAACAGCTTTGCCTCCTGGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: EESCGLQERACVAGN*STTPLKQLCLLAGR
Trigger: GCGCCCAGCCAGGAGGCAAAGCTGTTTCAATGGTGTAGTGGACAAGTTACCAGCCACGCAAGCCCTTTCCTGTAAACCACAGGACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS TCA 72 bp ACTGCGTGTGTCCCTAACGAGACGAGCACAATCCCGTaGGCTGAACAGAGGTGCCCACTGAAGGACAGAAAC +
Preference number: 6 (lower is better)
Translates to: TACVPNETSTIP*AEQRCPLKDRN
Trigger: GTTTCTGTCCTTCAGTGGGCACCTCTGTTCAGCTCACGGGATTGTGCTCGTCTCGTTAGGGACACACGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478903.5
ENST00000485787.1
CDS GCA 72 bp CAGAATAGAGAGCTGGTCTGTGGTGTCCTCCAGAACTaGCGAGATCCTCAGCACATCTGGAAGGGACAGTGG +
Preference number: 6 (lower is better)
Translates to: QNRELVCGVLQN*RDPQHIWKGQW
Trigger: CCACTGTCCCTTCCAGATGTGCTGAGGATCTCGGCAGTTCTGGAGGACACCACAGACCAGCTCTCTATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000463651.1
ENST00000480302.5
CDS CAA 72 bp GTCAGTCCAATGGTGGTATGCAAGCCAAAGCTGCCATaGTTGGAGTCCCGTGCTTCGTGGACATGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: VSPMVVCKPKLP*LESRASWTWAC
Trigger: ACAAGCCCATGTCCACGAAGCACGGGACTCCAACAATGGCAGCTTTGGCTTGCATACCACCATTGGACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CCA 72 bp GTCCAATGGTGGTATGCAAGCCAAAGCTGCCATTGTTaGAGTCCCGTGCTTCGTGGACATGGGCTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: VQWWYASQSCHC*SPVLRGHGLVL
Trigger: TAACACAAGCCCATGTCCACGAAGCACGGGACTCCAACAATGGCAGCTTTGGCTTGCATACCACCATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp TTGTTAGCTGAGAGGGGATCAGGAGTGACAGCTCAATaGCCATCTCCTGGGTTCTTGGCTAATGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: LLAERGSGVTAQ*PSPGFLANVPG
Trigger: CCCTGGGACATTAGCCAAGAACCCAGGAGATGGCAATTGAGCTGTCACTCCTGATCCCCTCTCAGCTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS CAA 72 bp AGTCCAATGGTGGTATGCAAGCCAAAGCTGCCATTGTaGGAGTCCCGTGCTTCGTGGACATGGGCTTGTGTT +
Preference number: 6 (lower is better)
Translates to: SPMVVCKPKLPL*ESRASWTWACV
Trigger: AACACAAGCCCATGTCCACGAAGCACGGGACTCCAACAATGGCAGCTTTGGCTTGCATACCACCATTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 90 bp CTCCCCCAGAGGTCCCTCTGTCACACTGGCAGTTCTAAGAAAGGTTaGGTCAGTCCAATGGTGGTATGCAAGCCAAAGCTGCCATTGTTG +
Preference number: 6 (lower is better)
Translates to: LPQRSLCHTGSSKKG*VSPMVVCKPKLPLL
Trigger: CAACAATGGCAGCTTTGGCTTGCATACCACCATTGGACTGACCAAACCTTTCTTAGAACTGCCAGTGTGACAGAGGGACCTCTGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 90 bp GAGAGGGGATCAGGAGTGACAGCTCAATTGCCATCTCCTGGGTTCTaGGCTAATGTCCCAGGGATTACCTCAATCTCTTCCACCAAGAGT +
Preference number: 6 (lower is better)
Translates to: ERGSGVTAQLPSPGF*ANVPGITSISSTKS
Trigger: ACTCTTGGTGGAAGAGATTGAGGTAATCCCTGGGACATTAGCCAAGAACCCAGGAGATGGCAATTGAGCTGTCACTCCTGATCCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS CAA 90 bp GGGCTGTTGCCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTaGTTAGCTGAGAGGGGATCAGGAGTGACAGCTCAATTGCCATCT +
Preference number: 6 (lower is better)
Translates to: GLLPIEMEGNLCLPP*LAERGSGVTAQLPS
Trigger: AGATGGCAATTGAGCTGTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGGCAACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS TCA 72 bp GGTATCTGTCACCTAACCACCATTAATCTCCCATTTTaGCTAGTGGCCACGCTGTCACTTTGGGTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: GICHLTTINLPF*LVATLSLWVPV
Trigger: CACGGGGACCCAAAGTGACAGCGTGGCCACTAGTCAAAATGGGAGATTAATGGTGGTTAGGTGACAGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469822.1
CDS TCA 72 bp GAACTTGGGAATTACGCAGTCAGCGCGAGGAAGTGCTaGTCTTGGACACCCACTCCAAAAGGCCAACATAAG +
Preference number: 6 (lower is better)
Translates to: ELGNYAVSARKC*SWTPTPKGQHK
Trigger: CTTATGTTGGCCTTTTGGAGTGGGTGTCCAAGATCAGCACTTCCTCGCGCTGACTGCGTAATTCCCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CCA 72 bp GGTCCCTCTGTCACACTGGCAGTTCTAAGAAAGGTTTaGTCAGTCCAATGGTGGTATGCAAGCCAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: GPSVTLAVLRKV*SVQWWYASQSC
Trigger: GCAGCTTTGGCTTGCATACCACCATTGGACTGACCAAACCTTTCTTAGAACTGCCAGTGTGACAGAGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS TCA 72 bp AATCTGCTAACCTACAAAGAGGGTAGTGAGATATACTaGCCCAAGAGAAAGCAAGACGCCCTCCCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: NLLTYKEGSEIY*PKRKQDALPQR
Trigger: CCTCTGGGGGAGGGCGTCTTGCTTTCTCTTGGGTCAGTATATCTCACTACCCTCTTTGTAGGTTAGCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CCA 72 bp AATTCAGAGCCAATGCTTCAGTCATCTCAGAAGGCCTaGGTAGTTTGCTTTCCCCAGTGCACAGTCACTCTG +
Preference number: 6 (lower is better)
Translates to: NSEPMLQSSQKA*VVCFPQCTVTL
Trigger: CAGAGTGACTGTGCACTGGGGAAAGCAAACTACCCAGGCCTTCTGAGATGACTGAAGCATTGGCTCTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469822.1
CDS CCA 72 bp CTGGCAGTTCTAAGAAAGGTTTGGTCAGTCCAATGGTaGTATGCAAGCCAAAGCTGCCATTGTTGGAGTCCC +
Preference number: 6 (lower is better)
Translates to: LAVLRKVWSVQW*YASQSCHCWSP
Trigger: GGGACTCCAACAATGGCAGCTTTGGCTTGCATACCACCATTGGACTGACCAAACCTTTCTTAGAACTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp ACAGCGAACCGGCCTCTGTGTCTGATTTCTGGCAAGTaGGGTCCTTCCTCAGTTATTAACGGACTGGGTATT +
Preference number: 6 (lower is better)
Translates to: TANRPLCLISGK*GPSSVINGLGI
Trigger: AATACCCAGTCCGTTAATAACTGAGGAAGGACCCAACTTGCCAGAAATCAGACACAGAGGCCGGTTCGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CAA 72 bp TCAGGAGTGACAGCTCAATTGCCATCTCCTGGGTTCTaGGCTAATGTCCCAGGGATTACCTCAATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SGVTAQLPSPGF*ANVPGITSISS
Trigger: GGAAGAGATTGAGGTAATCCCTGGGACATTAGCCAAGAACCCAGGAGATGGCAATTGAGCTGTCACTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS CAA 72 bp CCGATAGAGATGGAGGGAAATCTTTGTCTCCCTCCTTaGTTAGCTGAGAGGGGATCAGGAGTGACAGCTCAA +
Preference number: 6 (lower is better)
Translates to: PIEMEGNLCLPP*LAERGSGVTAQ
Trigger: TTGAGCTGTCACTCCTGATCCCCTCTCAGCTAACAAAGGAGGGAGACAAAGATTTCCCTCCATCTCTATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453254.5
CDS CAA 72 bp TGTGGTTTACAGGAAAGGGCTTGCGTGGCTGGTAACTaGTCCACTACACCATTGAAACAGCTTTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: CGLQERACVAGN*STTPLKQLCLL
Trigger: CAGGAGGCAAAGCTGTTTCAATGGTGTAGTGGACAAGTTACCAGCCACGCAAGCCCTTTCCTGTAAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp AGGTCCCTCTGTCACACTGGCAGTTCTAAGAAAGGTTaGGTCAGTCCAATGGTGGTATGCAAGCCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: RSLCHTGSSKKG*VSPMVVCKPKL
Trigger: CAGCTTTGGCTTGCATACCACCATTGGACTGACCAAACCTTTCTTAGAACTGCCAGTGTGACAGAGGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 90 bp GTGGTTCGCCTGTCACTGACACCGTCATCTCAGAATGCCAAACTTTaGGAGGAAGGTTTGAGTCTTCCAGGCTGTCTTCTTCCATTCTTC +
Preference number: 6 (lower is better)
Translates to: VVRLSLTPSSQNAKL*EEGLSLPGCLLPFF
Trigger: GAAGAATGGAAGAAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAAGTTTGGCATTCTGAGATGACGGTGTCAGTGACAGGCGAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265239.11
ENST00000452735.1
ENST00000453254.5
ENST00000455191.5
ENST00000463651.1
ENST00000480302.5
CDS CAA 90 bp GTGGTTCGCCTGTCACTGACACCGTCATCTCAGAATGCCAAACTTTaGGAGGAAGGTTTGAGTCTTCCAGGCTGTCTCTATTCAATTCCC +
Preference number: 6 (lower is better)
Translates to: VVRLSLTPSSQNAKL*EEGLSLPGCLYSIP
Trigger: GGGAATTGAATAGAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAAGTTTGGCATTCTGAGATGACGGTGTCAGTGACAGGCGAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416896.1
CDS TCA 72 bp TTCTTCTTCTACGGTACTAGGTGGTTCGCCTGTCACTaGCACCGTCATCTCAGAATGCCAAACTTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: FFFYGTRWFACH*HRHLRMPNFWR
Trigger: CCTCCAAAAGTTTGGCATTCTGAGATGACGGTGTCAGTGACAGGCGAACCACCTAGTACCGTAGAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000452735.1
ENST00000453254.5
ENST00000455191.5
ENST00000463651.1
ENST00000480302.5
CDS CAA 72 bp GAGCCACTGCGCCCGGCTTTGTTGTTGTTGTTGTTGTaGTTGTTTTTGAGACGGTCTTGTTCTGTCACTCAG +
Preference number: 6 (lower is better)
Translates to: EPLRPALLLLLL*LFLRRSCSVTQ
Trigger: CTGAGTGACAGAACAAGACCGTCTCAAAAACAACAACAACAACAACAACAACAAAGCCGGGCGCAGTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473225.1
CDS CAA 90 bp TTCTCCTCCCATATGGAAATTAAGTCAAAAGTACTCAAGTCACCGTaGCCAAAGGAGGAGTCCTGTGGTTTACAGGAAAGGGCTTGCGTG +
Preference number: 6 (lower is better)
Translates to: FSSHMEIKSKVLKSP*PKEESCGLQERACV
Trigger: CACGCAAGCCCTTTCCTGTAAACCACAGGACTCCTCCTTTGGCAACGGTGACTTGAGTACTTTTGACTTAATTTCCATATGGGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS TCA 72 bp GCCCGGCTTTGTTGTTGTTGTTGTTGTTGTTGTTTTTaGGACGGTCTTGTTCTGTCACTCAGGCTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: ARLCCCCCCCCF*DGLVLSLRLKC
Trigger: GCACTTCAGCCTGAGTGACAGAACAAGACCGTCTCAAAAACAACAACAACAACAACAACAACAAAGCCGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473225.1
CDS CCA 72 bp TCCACCAAGAGTTCCTCTGTTCTGTTACACTTTTTCTaGGTCTGGGCAATCTGCAGCTCGGTATTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: STKSSSVLLHFF*VWAICSSVLVF
Trigger: GAAAACCAATACCGAGCTGCAGATTGCCCAGACCCAGAAAAAGTGTAACAGAACAGAGGAACTCTTGGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000453254.5
ENST00000455191.5
ENST00000473225.1
ENST00000490748.5
CDS CCA 72 bp ACACTGGCAGTTCTAAGAAAGGTTTGGTCAGTCCAATaGTGGTATGCAAGCCAAAGCTGCCATTGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: TLAVLRKVWSVQ*WYASQSCHCWS
Trigger: ACTCCAACAATGGCAGCTTTGGCTTGCATACCACCATTGGACTGACCAAACCTTTCTTAGAACTGCCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp GTCATGAGCCACTGGGATTTGTCCCAATTTCCCATTTaGTATAGTTCCTCACGGCTCAGTTTCGAAGGCAAG +
Preference number: 6 (lower is better)
Translates to: VMSHWDLSQFPI*YSSSRLSFEGK
Trigger: CTTGCCTTCGAAACTGAGCCGTGAGGAACTATACAAAATGGGAAATTGGGACAAATCCCAGTGGCTCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265239.11
ENST00000480302.5
ENST00000493624.1
CDS CAA 72 bp AAACTGGGAGTTTGCCACCTAAGCCCTTTTGCAGTTTaGCAGCGTGTATGGGTTCTCTTGTCTATGCTGCAA +
Preference number: 6 (lower is better)
Translates to: KLGVCHLSPFAV*QRVWVLLSMLQ
Trigger: TTGCAGCATAGACAAGAGAACCCATACACGCTGCAAAACTGCAAAAGGGCTTAGGTGGCAAACTCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 90 bp TTAAACTCCACAGCGAACCGGCCTCTGTGTCTGATTTCTGGCAAGTaGGGTCCTTCCTCAGTTATTAACGGACTGGGTATTTTTGTGATT +
Preference number: 6 (lower is better)
Translates to: LNSTANRPLCLISGK*GPSSVINGLGIFVI
Trigger: AATCACAAAAATACCCAGTCCGTTAATAACTGAGGAAGGACCCAACTTGCCAGAAATCAGACACAGAGGCCGGTTCGCTGTGGAGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS GCA 72 bp GCTAGATTAGGATCCCAGAATTTCCGTTCTGTCTATTaGTGTGTGTATCGAGAGAAAAGCACCCCACTGTTG +
Preference number: 6 (lower is better)
Translates to: ARLGSQNFRSVY*CVYREKSTPLL
Trigger: CAACAGTGGGGTGCTTTTCTCTCGATACACACAGCAATAGACAGAACGGAAATTCTGGGATCCTAATCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452735.1
CDS CCA 72 bp TGTAGTGGAAAGGGCACGTTTCCTAAGTTACAAATGTaGTTTGGAATCCCACCTTCCACTAGTTGTGGGATG +
Preference number: 6 (lower is better)
Translates to: CSGKGTFPKLQM*FGIPPSTSCGM
Trigger: CATCCCACAACTAGTGGAAGGTGGGATTCCAAACCACATTTGTAACTTAGGAAACGTGCCCTTTCCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp CAAAGCTTGCAGGAGACTGTTGTAAGTGGCCGAATCTaGCAACTCCTTAATGGTATCTGCAATCACATCGCT +
Preference number: 6 (lower is better)
Translates to: QSLQETVVSGRI*QLLNGICNHIA
Trigger: AGCGATGTGATTGCAGATACCATTAAGGAGTTGCAAGATTCGGCCACTTACAACAGTCTCCTGCAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CAA 72 bp CCGTCATCTCAGAATGCCAAACTTTTGGAGGAAGGTTaGAGTCTTCCAGGCTGTCTCTATTCAATTCCCGTT +
Preference number: 6 (lower is better)
Translates to: PSSQNAKLLEEG*SLPGCLYSIPV
Trigger: AACGGGAATTGAATAGAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAAGTTTGGCATTCTGAGATGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416896.1
CDS CAA 90 bp CTTCTTAGTGTCATGAGCCACTGGGATTTGTCCCAATTTCCCATTTaGTATAGTTCCTCACGGCTCAGTTTCGAAGGCAAGGTTTCCTTA +
Preference number: 6 (lower is better)
Translates to: LLSVMSHWDLSQFPI*YSSSRLSFEGKVSL
Trigger: TAAGGAAACCTTGCCTTCGAAACTGAGCCGTGAGGAACTATACAAAATGGGAAATTGGGACAAATCCCAGTGGCTCATGACACTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265239.11
ENST00000480302.5
ENST00000493624.1
CDS CAA 90 bp TTCTTCAGTGTCTCCGTAGTCATGATGGTCTGCCTTGTAGGTTTTTaGAAGACAAGATCCTGCATTTTGTTAAACTCCACAGCGAACCGG +
Preference number: 6 (lower is better)
Translates to: FFSVSVVMMVCLVGF*KTRSCILLNSTANR
Trigger: CCGGTTCGCTGTGGAGTTTAACAAAATGCAGGATCTTGTCTTCAAAAAACCTACAAGGCAGACCATCATGACTACGGAGACACTGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CAA 90 bp CTCTTTGCTCAAAGCTTGCAGGAGACTGTTGTAAGTGGCCGAATCTaGCAACTCCTTAATGGTATCTGCAATCACATCGCTGAAAAACTG +
Preference number: 6 (lower is better)
Translates to: LFAQSLQETVVSGRI*QLLNGICNHIAEKL
Trigger: CAGTTTTTCAGCGATGTGATTGCAGATACCATTAAGGAGTTGCAAGATTCGGCCACTTACAACAGTCTCCTGCAAGCTTTGAGCAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CAA 90 bp CGTTCTGTCTATTGCTGTGTGTATCGAGAGAAAAGCACCCCACTGTaGGCAAATCAATCTTACAGTCAATCATTCTTTAGGCAGCGGGAA +
Preference number: 6 (lower is better)
Translates to: RSVYCCVYREKSTPL*ANQSYSQSFFRQRE
Trigger: TTCCCGCTGCCTAAAGAATGATTGACTGTAAGATTGATTTGCCAACAGTGGGGTGCTTTTCTCTCGATACACACAGCAATAGACAGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452735.1
CDS CAA 90 bp CACCACCCCATCCTCGTAGCTGAATCTCCACCCATAGTTTGTAACTaGAGGTTTTCCTTCTTTCCTACTCCTTCATTTCCCAGTATAGTA +
Preference number: 6 (lower is better)
Translates to: HHPILVAESPPIVCN*RFSFFPTPSFPSIV
Trigger: TACTATACTGGGAAATGAAGGAGTAGGAAAGAAGGAAAACCTCAAGTTACAAACTATGGGTGGAGATTCAGCTACGAGGATGGGGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 90 bp GCCGGAAGTTGGAAGTTGTATATTAGAATGCTAATGAAATTGAACTaGGGAATTACGCAGTCAGCGCGAGGAAGTGCTGATCTTGGACAC +
Preference number: 6 (lower is better)
Translates to: AGSWKLYIRMLMKLN*GITQSARGSADLGH
Trigger: GTGTCCAAGATCAGCACTTCCTCGCGCTGACTGCGTAATTCCCAAGTTCAATTTCATTAGCATTCTAATATACAACTTCCAACTTCCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CCA 72 bp GAGAATTCTAACATGTTTCTGGCTTTGGGGGCTGGATaGATAATGGTGCATTTACAAAGTTGGGGAATCAGG +
Preference number: 6 (lower is better)
Translates to: ENSNMFLALGAG*IMVHLQSWGIR
Trigger: CCTGATTCCCCAACTTTGTAAATGCACCATTATCCATCCAGCCCCCAAAGCCAGAAACATGTTAGAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp CATACAGAGGACTACACTGAAAGATTTTGCAGAGGGTaGTATGTACGTCTAAACACCTGGCACCTAGTAGGT +
Preference number: 6 (lower is better)
Translates to: HTEDYTERFCRG*YVRLNTWHLVG
Trigger: ACCTACTAGGTGCCAGGTGTTTAGACGTACATACAACCCTCTGCAAAATCTTTCAGTGTAGTCCTCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000493624.1
CDS CAA 72 bp GGTGCATTTACAAAGTTGGGGAATCAGGAGATGGTTTaGTGGGAGGAGCTAAAGTTGAATTTGAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: GAFTKLGNQEMV*WEELKLNLRKL
Trigger: CAGCTTCCTCAAATTCAACTTTAGCTCCTCCCACAAAACCATCTCCTGATTCCCCAACTTTGTAAATGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 90 bp CATGTAGCGATTCTCCAAGTTGGATTTTGCCTTCATCTCTTGCAGTaGGTCCTTGAGGTTAGCAATATACTCATTCTGACTCTGGACTTC +
Preference number: 6 (lower is better)
Translates to: HVAILQVGFCLHLLQ*VLEVSNILILTLDF
Trigger: GAAGTCCAGAGTCAGAATGAGTATATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265239.11
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CAA 90 bp CATGTAGCGATTCTCCAAGTTGGATTTTGCCTTCATCTCTTGCAGTaGGTCCTTGAGGTTAGCAATATACTCATTCTGACTTCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: HVAILQVGFCLHLLQ*VLEVSNILILTSVA
Trigger: GGCAACAGAAGTCAGAATGAGTATATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473225.1
CDS CAA 90 bp CTCCTGGCATTTTTCACCGTGACTTCTCATCCTATAAACTCAGGTTaGAACGAAGTTCAGCGCTCTCGATGCTGTATTTCTTACTCAATC +
Preference number: 6 (lower is better)
Translates to: LLAFFTVTSHPINSG*NEVQRSRCCISYSI
Trigger: GATTGAGTAAGAAATACAGCATCGAGAGCGCTGAACTTCGTTCAAACCTGAGTTTATAGGATGAGAAGTCACGGTGAAAAATGCCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473225.1
CDS CAA 90 bp GAAAGAAAGGATTGGGTAGGAAAAGCACACTGGCTGTTGTGTTATTaGGTCTTCCATCTCCTGGAGACAGGACTGAGAAGGAAAGTTTTT +
Preference number: 6 (lower is better)
Translates to: ERKDWVGKAHWLLCY*VFHLLETGLRRKVF
Trigger: AAAAACTTTCCTTCTCAGTCCTGTCTCCAGGAGATGGAAGACCAAATAACACAACAGCCAGTGTGCTTTTCCTACCCAATCCTTTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS GCA 72 bp GTAAGTGGCCGAATCTTGCAACTCCTTAATGGTATCTaGAATCACATCGCTGAAAAACTGCCTATCAATCTG +
Preference number: 6 (lower is better)
Translates to: VSGRILQLLNGI*NHIAEKLPINL
Trigger: CAGATTGATAGGCAGTTTTTCAGCGATGTGATTGCAGATACCATTAAGGAGTTGCAAGATTCGGCCACTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS GCA 72 bp ATTGGTTTTCATGTAGCGATTCTCCAAGTTGGATTTTaGCTTCATCTCTTGCAGTTGGTCCTTGAGGTTAGC +
Preference number: 6 (lower is better)
Translates to: IGFHVAILQVGF*LHLLQLVLEVS
Trigger: GCTAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCTACATGAAAACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000453254.5
ENST00000455191.5
ENST00000473225.1
ENST00000490748.5
CDS CCA 72 bp AAGATGTTAACCTGTGGACATATCCATGAAGACAGATaGGTATTTCAGGTCTGGGTTAGGCATATGGAGAAG +
Preference number: 6 (lower is better)
Translates to: KMLTCGHIHEDR*VFQVWVRHMEK
Trigger: CTTCTCCATATGCCTAACCCAGACCTGAAATACCCATCTGTCTTCATGGATATGTCCACAGGTTAACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 90 bp GGTTTTCATGTAGCGATTCTCCAAGTTGGATTTTGCCTTCATCTCTaGCAGTTGGTCCTTGAGGTTAGCAATATACTCATTCTGACTCTG +
Preference number: 6 (lower is better)
Translates to: GFHVAILQVGFCLHL*QLVLEVSNILILTL
Trigger: CAGAGTCAGAATGAGTATATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCTACATGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265239.11
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CAA 90 bp CTTGGTCACTTCTTCTTGCCTCTCCTCTTATCCTTGCCTTTACCTTaGCCTTTTGAATCCTTGCTATCAACTTTGTCTTTAGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: LGHFFLPLLLSLPLP*PFESLLSTLSLGIL
Trigger: CAAGATGCCTAAAGACAAAGTTGATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAGGCAAGAAGAAGTGACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000455191.5
ENST00000478903.5
ENST00000485787.1
ENST00000490748.5
CDS TCA 72 bp GTCCTTCCTCAGTTATTAACGGACTGGGTATTTTTGTaGTTGTTGAGGCCATTGGAAGTTTGTCTAGATTCG +
Preference number: 6 (lower is better)
Translates to: VLPQLLTDWVFL*LLRPLEVCLDS
Trigger: CGAATCTAGACAAACTTCCAATGGCCTCAACAATCACAAAAATACCCAGTCCGTTAATAACTGAGGAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000463651.1
ENST00000480302.5
ENST00000490748.5
CDS TCA 72 bp GCCTCTCCTCTTATCCTTGCCTTTACCTTTGCCTTTTaGATCCTTGCTATCAACTTTGTCTTTAGGCATCTT +
Preference number: 6 (lower is better)
Translates to: ASPLILAFTFAF*ILAINFVFRHL
Trigger: AAGATGCCTAAAGACAAAGTTGATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000455191.5
ENST00000478903.5
ENST00000485787.1
ENST00000490748.5
CDS GCA 72 bp AACTTGGTCACTTCTTCTTGCCTCTCCTCTTATCCTTaGCTTTACCTTTGCCTTTTGAATCCTTGCTATCAA +
Preference number: 6 (lower is better)
Translates to: NLVTSSCLSSYP*LYLCLLNPCYQ
Trigger: TTGATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAGGCAAGAAGAAGTGACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000455191.5
ENST00000478903.5
ENST00000485787.1
ENST00000490748.5
CDS GCA 72 bp ATAAACTCAGGTTTGAACGAAGTTCAGCGCTCTCGATaGTGTATTTCTTACTCAATCTCTTCCACCAAGAGT +
Preference number: 6 (lower is better)
Translates to: INSGLNEVQRSR*CISYSISSTKS
Trigger: ACTCTTGGTGGAAGAGATTGAGTAAGAAATACAGCATCGAGAGCGCTGAACTTCGTTCAAACCTGAGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473225.1
CDS CCA 72 bp ATTGCTGTGTGTATCGAGAGAAAAGCACCCCACTGTTaGCAAATCAATCTTACAGTCAATCATTCTTTAGGC +
Preference number: 6 (lower is better)
Translates to: IAVCIERKAPHC*QINLTVNHSLG
Trigger: GCCTAAAGAATGATTGACTGTAAGATTGATTTGCCAACAGTGGGGTGCTTTTCTCTCGATACACACAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452735.1
CDS CCA 72 bp ACATTCTTCTTCTCCGTCATTCCCCAACTTACCACCTaGTACACTCTGCTCAAAAGTAAAGTTCTTTGTGAA +
Preference number: 6 (lower is better)
Translates to: TFFFSVIPQLTT*YTLLKSKVLCE
Trigger: TTCACAAAGAACTTTACTTTTGAGCAGAGTGTACCAGGTGGTAAGTTGGGGAATGACGGAGAAGAAGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490748.5
CDS CAA 72 bp GTCTCCGTAGTCATGATGGTCTGCCTTGTAGGTTTTTaGAAGACAAGATCCTGCATTTTGTTAAACTCCACA +
Preference number: 6 (lower is better)
Translates to: VSVVMMVCLVGF*KTRSCILLNST
Trigger: TGTGGAGTTTAACAAAATGCAGGATCTTGTCTTCAAAAAACCTACAAGGCAGACCATCATGACTACGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000490748.5
CDS CAA 90 bp AGTGAGTTCGTAATTTTACTTCTTAGTGTCATGAGCCACTGGGATTaGTCCCAATTTCCCATTTTGTATAGTTCCTCACGGCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: SEFVILLLSVMSHWD*SQFPILYSSSRLSF
Trigger: GAAACTGAGCCGTGAGGAACTATACAAAATGGGAAATTGGGACAAATCCCAGTGGCTCATGACACTAAGAAGTAAAATTACGAACTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265239.11
ENST00000480302.5
ENST00000493624.1
CDS CAA 90 bp GGTTTTCATGTAGCGATTCTCCAAGTTGGATTTTGCCTTCATCTCTaGCAGTTGGTCCTTGAGGTTAGCAATATACTCATTCTGACTTCT +
Preference number: 6 (lower is better)
Translates to: GFHVAILQVGFCLHL*QLVLEVSNILILTS
Trigger: AGAAGTCAGAATGAGTATATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGAATCGCTACATGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473225.1
CDS CAA 90 bp ATTAACGGACTGGGTATTTTTGTGATTGTTGAGGCCATTGGAAGTTaGTCTAGATTCGTTCCTTCTAGATTCATTTCTCTGCACGCAGAT +
Preference number: 6 (lower is better)
Translates to: INGLGIFVIVEAIGS*SRFVPSRFISLHAD
Trigger: ATCTGCGTGCAGAGAAATGAATCTAGAAGGAACGAATCTAGACAAACTTCCAATGGCCTCAACAATCACAAAAATACCCAGTCCGTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480302.5
CDS TCA 72 bp AGAAAACTAAAATGCCACATGAGAGGTCTCCTGTACTaGACTGAGGATCTTAGGCTTAAGATTGTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: RKLKCHMRGLLY*TEDLRLKIVLE
Trigger: CTCAAGAACAATCTTAAGCCTAAGATCCTCAGTTCAGTACAGGAGACCTCTCATGTGGCATTTTAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS GCA 72 bp CTTTTTAGTTATTTGTGGAGATGGGCCTCACTATGTTaGCCAGGTAGTACTACATTTCTAACTGATGCAGTA +
Preference number: 6 (lower is better)
Translates to: LFSYLWRWASLC*PGSTTFLTDAV
Trigger: TACTGCATCAGTTAGAAATGTAGTACTACCTGGGCAACATAGTGAGGCCCATCTCCACAAATAACTAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp GTAATTTTACTTCTTAGTGTCATGAGCCACTGGGATTaGTCCCAATTTCCCATTTTGTATAGTTCCTCACGG +
Preference number: 6 (lower is better)
Translates to: VILLLSVMSHWD*SQFPILYSSSR
Trigger: CCGTGAGGAACTATACAAAATGGGAAATTGGGACAAATCCCAGTGGCTCATGACACTAAGAAGTAAAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265239.11
ENST00000480302.5
ENST00000493624.1
CDS CAA 72 bp ATTCTCCAAGTTGGATTTTGCCTTCATCTCTTGCAGTaGGTCCTTGAGGTTAGCAATATACTCATTCTGACT +
Preference number: 6 (lower is better)
Translates to: ILQVGFCLHLLQ*VLEVSNILILT
Trigger: AGTCAGAATGAGTATATTGCTAACCTCAAGGACCAACTGCAAGAGATGAAGGCAAAATCCAACTTGGAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000453254.5
ENST00000455191.5
ENST00000473225.1
ENST00000490748.5
CDS CAA 72 bp TGGAAGTTGTATATTAGAATGCTAATGAAATTGAACTaGGGAATTACGCAGTCAGCGCGAGGAAGTGCTGAT +
Preference number: 6 (lower is better)
Translates to: WKLYIRMLMKLN*GITQSARGSAD
Trigger: ATCAGCACTTCCTCGCGCTGACTGCGTAATTCCCAAGTTCAATTTCATTAGCATTCTAATATACAACTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS TCA 72 bp TTCTTGGCTGGAAACTTTTCATACAGAGGACTACACTaGAAGATTTTGCAGAGGGTTGTATGTACGTCTAAA +
Preference number: 6 (lower is better)
Translates to: FLAGNFSYRGLH*KILQRVVCTSK
Trigger: TTTAGACGTACATACAACCCTCTGCAAAATCTTTCAGTGTAGTCCTCTGTATGAAAAGTTTCCAGCCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265239.11
ENST00000493624.1
CDS CAA 72 bp CTGGGTATTTTTGTGATTGTTGAGGCCATTGGAAGTTaGTCTAGATTCGTTCCTTCTAGATTCATTTCTCTG +
Preference number: 6 (lower is better)
Translates to: LGIFVIVEAIGS*SRFVPSRFISL
Trigger: CAGAGAAATGAATCTAGAAGGAACGAATCTAGACAAACTTCCAATGGCCTCAACAATCACAAAAATACCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265239.11
ENST00000416896.1
ENST00000453254.5
ENST00000455191.5
ENST00000463651.1
ENST00000480302.5
ENST00000490748.5
CDS CAA 90 bp TTATCCTTGCCTTTACCTTTGCCTTTTGAATCCTTGCTATCAACTTaGTCTTTAGGCATCTTGAAACCACCAATTTCTCTCCGTATCATA +
Preference number: 6 (lower is better)
Translates to: LSLPLPLPFESLLST*SLGILKPPISLRII
Trigger: TATGATACGGAGAGAAATTGGTGGTTTCAAGATGCCTAAAGACAAAGTTGATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265239.11
ENST00000455191.5
ENST00000478903.5
ENST00000485787.1
ENST00000490748.5
CDS CAA 90 bp TACTCCTTCATTTCCCAGTATAGTAGCTTACCTATTCAATTCCCGTaGAATGACTTCCAGCTCAGTGAGTTCGTAATTTTACTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: YSFISQYSSLPIQFP*NDFQLSEFVILLLS
Trigger: ACTAAGAAGTAAAATTACGAACTCACTGAGCTGGAAGTCATTCAACGGGAATTGAATAGGTAAGCTACTATACTGGGAAATGAAGGAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1
CDS CAA 72 bp ATTTCCCAGTATAGTAGCTTACCTATTCAATTCCCGTaGAATGACTTCCAGCTCAGTGAGTTCGTAATTTTA +
Preference number: 6 (lower is better)
Translates to: ISQYSSLPIQFP*NDFQLSEFVIL
Trigger: TAAAATTACGAACTCACTGAGCTGGAAGTCATTCAACGGGAATTGAATAGGTAAGCTACTATACTGGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493624.1