Pregenerated sensors for IQCF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173389Ensembl transcript IDs: ENST00000310914.10, ENST00000314534.6
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGGCACTGAGGGCTGCGTaGAACAGTGCCCGACGCACC | + |
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Preference number: 2 (lower is better) Translates to: TLYWPLMNPREAQERHLQALRAA*NSARRT Trigger: GGTGCGTCGGGCACTGTTGCACGCAGCCCTCAGTGC...CTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGAATAGCGTCTGCGGATaGGCCACATGCGGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TLYWPLMNPREAQERHLQNSVCG*ATCGPG Trigger: CCCAGGCCCGCATGTGGCGCATCCGCAGACGCTATT...CTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTTCCGGGAGAAGGCCTCTAGCGCTGCCTGCCGCCTCTTCTTCAGAATCTCCCCGCCACCAGGCCTaGATCTTGGTGGCTACCGTA | + |
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Preference number: 2 (lower is better) Translates to: TPSGRRPLALPAASSSESPRHQA*ILVATV Trigger: TACGGTAGCCACCAAGATCCAGGCCTGGTGGCGGGG...AGATTCTGAAGAAGAGGCGGCAGGCAGCGCTAGAGGCCTTCTCCCGGAAGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR-3UTR GCA 90 bp | TCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGTAGCCTCTAGCGCTGCCTaGCGCCTCTTCTTCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: SVLALDEPPGSTGAAPPVASSAA*RLFFRI Trigger: GATTCTGAAGAAGAGGCGGCAGGCAGCGCTAGAGGC...TACTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGACCAGGCCTGGATCTTaGTGGCTACCGTATCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VGCDSVLALDEPPGSTGATRPGS*WLPYLC Trigger: ACAAAGATACGGTAGCCACCAAGATCCAGGCCTGGT...CGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGTGTCTCAACCAGAACTaGAGTTTTAGCCATTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VGCDSVLALDEPPGSTGACLNQN*SFSHCS Trigger: GGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACA...CGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR CCA 72 bp | ACAATGCAAGGCCCTGAGTCCAGCAAGATCTCCAGCTaGAGATGCAGCTGGTTGGCTGTGACTCTGTACTGG | + |
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Preference number: 3 (lower is better) Translates to: TMQGPESSKISS*RCSWLAVTLYW Trigger: CCAGTACAGAGTCACAGCCAACCAGCTGCATCTCCAGCTGGAGATCTTGCTGGACTCAGGGCCTTGCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGTATTTTCTGATTTCTCATaGGCATTGTCCACTGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SVLALDEPPGSTGAAPPVFSDFS*ALSTVC Trigger: ACAGACAGTGGACAATGCCAATGAGAAATCAGAAAA...TACTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | ACTCCTTCCGGGAGAAGGCCTCTAGCGCTGCCTGCCGCCTCTTCTTCAGAATCTTGCGGATGCGCCACATaGGGGCCTGGGACTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TPSGRRPLALPAASSSESCGCAT*GPGTAV Trigger: CACTGCAGTCCCAGGCCCGCATGTGGCGCATCCGCA...AGATTCTGAAGAAGAGGCGGCAGGCAGCGCTAGAGGCCTTCTCCCGGAAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CCA 90 bp | GTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGCCCCGCCACCAGGCCTaGATCTTGGTGGCTACCGTA | + |
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Preference number: 4 (lower is better) Translates to: VGCDSVLALDEPPGSTGAPRHQA*ILVATV Trigger: TACGGTAGCCACCAAGATCCAGGCCTGGTGGCGGGG...CGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | ACTCCTTCCGGGAGAAGGCCTCTAGCGCTGCCTGCCGCCTCTTCTTCAGAATCTCCTGGCAATAGCGTCTaGGGATGCGCCACATGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TPSGRRPLALPAASSSESPGNSV*GCATCG Trigger: CCCGCATGTGGCGCATCCGCAGACGCTATTGCCAGG...AGATTCTGAAGAAGAGGCGGCAGGCAGCGCTAGAGGCCTTCTCCCGGAAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| 3UTR CAA 72 bp | AGATGCAGCTGGTTGGCTGTGACTCTGTACTGGCCCTaGATGAACCCCCGGGAAGCACAGGAGCGGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: RCSWLAVTLYWP*MNPREAQERHL Trigger: GAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAACCAGCTGCATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CCA 90 bp | GTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCTGTGACTCTGTACTaGCCCTTGATGAACCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: VGCDSVLALDEPPGSTGAAVTLY*PLMNPR Trigger: CCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGC...CGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CCA 90 bp | ACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGAGCAAGATCTCCAGCTaGAGATGCAGCTGGTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TLYWPLMNPREAQERHLQSKISS*RCSWLA Trigger: AGCCAACCAGCTGCATCTCCAGCTGGAGATCTTGCT...CTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | ACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGTTCGTCTTTTGGGGCTaGTTCTCCTCCATTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TLYWPLMNPREAQERHLQFVFWG*FSSIGH Trigger: GTGACCAATGGAGGAGAAGCAGCCCCAAAAGACGAA...CTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | GTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTAAGGGCGCACCCTGCACTGAGGGCTGCGTaGAACAGTGCCCGACGCACC | + |
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Preference number: 4 (lower is better) Translates to: VSTRTGVLAIAPSVRAHPALRAA*NSARRT Trigger: GGTGCGTCGGGCACTGTTGCACGCAGCCCTCAGTGC...AGGGTGCGCCCTTACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | GTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTAAGGGCGCACCCTGCAGGCACTGAGGGCTaGGTGCAACAGTGCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: VSTRTGVLAIAPSVRAHPAGTEG*VQQCPT Trigger: CGTCGGGCACTGTTGCACGCAGCCCTCAGTGCCTGC...AGGGTGCGCCCTTACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | GAGATGCAGCTGGTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGAATCTCCAGCTGGAGATaGAGCTGGTTGGCTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: EMQLVGCDSVLALDEPPGISSWR*SWLAVT Trigger: AGTCACAGCCAACCAGCTGCATCTCCAGCTGGAGAT...TCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAACCAGCTGCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CCA 90 bp | TCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGTAGGTTCCTTCGTCTTTTaGGGCTGCTTCTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SVLALDEPPGSTGAAPPVGSFVF*GCFSSI Trigger: AATGGAGGAGAAGCAGCCCCAAAAGACGAAGGAACC...TACTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | GGCATTGTCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCAATAGCGTCTGCGGATaGGCCACATGCGGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GIVHCLCLNQNWSFSHCSNSVCG*ATCGPG Trigger: CCCAGGCCCGCATGTGGCGCATCCGCAGACGCTATT...GGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGACAATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CCA 90 bp | GAGATGCAGCTGGTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGATGTCTCAACCAGAACTaGAGTTTTAGCCATTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EMQLVGCDSVLALDEPPGCLNQN*SFSHCS Trigger: GGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACA...TCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAACCAGCTGCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR TCA 90 bp | GGCATTGTCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCCACAATGCAAGGCCCTaGGTCCAGCAAGATCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GIVHCLCLNQNWSFSHCSHNARP*VQQDLQ Trigger: CTGGAGATCTTGCTGGACTCAGGGCCTTGCATTGTG...GGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGACAATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | TCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTAGCCTCTAGCGCTGCCTaGCGCCTCTTCTTCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: STVCVSTRTGVLAIAPSVASSAA*RLFFRI Trigger: GATTCTGAAGAAGAGGCGGCAGGCAGCGCTAGAGGC...TACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | GGCATTGTCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCTACACTCTGTCACAATaGAAGGCCCTGAGTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GIVHCLCLNQNWSFSHCSYTLSQ*KALSPA Trigger: TGCTGGACTCAGGGCCTTGCATTGTGACAGAGTGTA...GGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGACAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CCA 90 bp | TCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTAGCTCCTAAGGACAAATaGGTTGGCATCTCCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: STVCVSTRTGVLAIAPSVAPKDK*VGISFC Trigger: GCAGAAGGAGATGCCAACCCATTTGTCCTTAGGAGC...TACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CCA 90 bp | TCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTAACCAGGCCTGGATCTTaGTGGCTACCGTATCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: STVCVSTRTGVLAIAPSVTRPGS*WLPYLC Trigger: ACAAAGATACGGTAGCCACCAAGATCCAGGCCTGGT...TACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR GCA 90 bp | TCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTAAGAAGTACCTTGCCTTaGTCTGCCTTTGACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: STVCVSTRTGVLAIAPSVRSTLP*SAFDSA Trigger: AGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCT...TACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | ACTCCTTCCGGGAGAAGGCCTCTAGCGCTGCCTGCCGCCTCTTCTTCAGAATCTACTCTGTACTGGCCCTaGATGAACCCCCGGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: TPSGRRPLALPAASSSESTLYWP*MNPREA Trigger: TGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGT...AGATTCTGAAGAAGAGGCGGCAGGCAGCGCTAGAGGCCTTCTCCCGGAAGGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | TCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGGCACCTCCAGTATGCCTTGCTCTGCCTTaGACTCTGCTCCTAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: SVLALDEPPGSTGAAPPVCLALP*TLLLRT Trigger: TGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCA...TACTGGAGGTGCCGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | GTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGCTAAGGACAAATGGGTaGGCATCTCCTTCTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VGCDSVLALDEPPGSTGALRTNG*ASPSAE Trigger: CTCAGCAGAAGGAGATGCCAACCCATTTGTCCTTAG...CGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | ACTCCTTCCGGGAGAAGGCCTCTAGCGCTGCCTGCCGCCTCTTCTTCAGAATCTGCTGCTTCTCCTCCATaGGTCACATATGGATTGATT | + |
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Preference number: 5 (lower is better) Translates to: TPSGRRPLALPAASSSESAASPP*VTYGLI Trigger: AATCAATCCATATGTGACCAATGGAGGAGAAGCAGC...AGATTCTGAAGAAGAGGCGGCAGGCAGCGCTAGAGGCCTTCTCCCGGAAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | GTTGGCTGTGACTCTGTACTGGCCCTTGATGAACCCCCGGGAAGCACAGGAGCGTTTTCTGATTTCTCATaGGCATTGTCCACTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: VGCDSVLALDEPPGSTGAFSDFS*ALSTVC Trigger: ACAGACAGTGGACAATGCCAATGAGAAATCAGAAAA...CGCTCCTGTGCTTCCCGGGGGTTCATCAAGGGCCAGTACAGAGTCACAGCCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS GCA 90 bp | TGCTCCATCTGTAAGGGCGCACCCTTCTATAGAAGTACCTTGCCTTaGTCTGCCTTTGACTCTGCTCCTAAGGACAAATGGGTTGGCATC | + |
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Preference number: 5 (lower is better) Translates to: CSICKGAPFYRSTLP*SAFDSAPKDKWVGI Trigger: GATGCCAACCCATTTGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTACAGATGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS GCA 90 bp | GCCATTGCTCCATCTGTAAGGGCGCACCCTTCTATAGAAGTACCTTaGCTTGCTCTGCCTTTGACTCTGCTCCTAAGGACAAATGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: AIAPSVRAHPSIEVP*LALPLTLLLRTNGL Trigger: CAACCCATTTGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTACAGATGGAGCAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | GTCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTGGGTTCCTTCGTCTTTaGGGGCTGCTTCTCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VHCLCLNQNWSFSHCSICGFLRL*GLLLLH Trigger: ATGGAGGAGAAGCAGCCCCAAAAGACGAAGGAACCC...ACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | TCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTACACCAGGCCTGGATCTaGGTGGCTACCGTATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: STVCVSTRTGVLAIAPSVHQAWI*VATVSL Trigger: CAAAGATACGGTAGCCACCAAGATCCAGGCCTGGTG...TACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS GCA 90 bp | ATTGTCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTaGTCCATCTGTAAGGGCGCACCCTTCTATAGAAGTACCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: IVHCLCLNQNWSFSH*SICKGAPFYRSTLP Trigger: AGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS-3UTR CAA 90 bp | TCCACTGTCTGTGTCTCAACCAGAACTGGAGTTTTAGCCATTGCTCCATCTGTAGAGGCTCATCTTCTTTaGAGGGTTCCTTCGTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: STVCVSTRTGVLAIAPSVEAHLL*RVPSSF Trigger: AAAAGACGAAGGAACCCTCAAAAGAAGATGAGCCTC...TACAGATGGAGCAATGGCTAAAACTCCAGTTCTGGTTGAGACACAGACAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS CAA 90 bp | GTAAGGGCGCACCCTTCTATAGAAGTACCTTGCCTTGCTCTGCCTTaGACTCTGCTCCTAAGGACAAATGGGTTGGCATCTCCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VRAHPSIEVPCLALP*TLLLRTNGLASPSA Trigger: AGCAGAAGGAGATGCCAACCCATTTGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS GCA 72 bp | CCATCTGTAAGGGCGCACCCTTCTATAGAAGTACCTTaGCTTGCTCTGCCTTTGACTCTGCTCCTAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: PSVRAHPSIEVP*LALPLTLLLRT Trigger: TGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTACAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS CAA 72 bp | TCCATCTGTAAGGGCGCACCCTTCTATAGAAGTACCTaGCCTTGCTCTGCCTTTGACTCTGCTCCTAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SICKGAPFYRST*PCSAFDSAPKD Trigger: GTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTACAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS CAA 90 bp | AGCCATTGCTCCATCTGTAAGGGCGCACCCTTCTATAGAAGTACCTaGCCTTGCTCTGCCTTTGACTCTGCTCCTAAGGACAAATGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SHCSICKGAPFYRST*PCSAFDSAPKDKWV Trigger: AACCCATTTGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTACAGATGGAGCAATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS GCA 72 bp | TGTAAGGGCGCACCCTTCTATAGAAGTACCTTGCCTTaGTCTGCCTTTGACTCTGCTCCTAAGGACAAATGG | + |
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Preference number: 6 (lower is better) Translates to: CKGAPFYRSTLP*SAFDSAPKDKW Trigger: CCATTTGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTGCGCCCTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS TCA 72 bp | GCTCCTAAGGACAAATGGGTTGGCATCTCCTTCTGCTaGGGCTCATCTTCTTTTGAGGGTTCCTTCGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: APKDKWVGISFC*GSSSFEGSFVF Trigger: AAAGACGAAGGAACCCTCAAAAGAAGATGAGCCTCAGCAGAAGGAGATGCCAACCCATTTGTCCTTAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310914.10 ENST00000314534.6 |
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| CDS CAA 72 bp | CACCCTTCTATAGAAGTACCTTGCCTTGCTCTGCCTTaGACTCTGCTCCTAAGGACAAATGGGTTGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: HPSIEVPCLALP*TLLLRTNGLAS Trigger: AGATGCCAACCCATTTGTCCTTAGGAGCAGAGTCAAAGGCAGAGCAAGGCAAGGTACTTCTATAGAAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314534.6 |
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| CDS CAA 72 bp | TTTGGGGCTGCTTCTCCTCCATTGGTCACATATGGATaGATTGTAGATGGTTCAAATCCCCTCACATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FGAASPPLVTYG*IVDGSNPLTSV Trigger: CACAGATGTGAGGGGATTTGAACCATCTACAATCAATCCATATGTGACCAATGGAGGAGAAGCAGCCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310914.10 ENST00000314534.6 |
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