RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQCE (Homo sapiens)

Ensembl gene IDs: ENSG00000106012

Ensembl transcript IDs: ENST00000325979.11, ENST00000325997.13, ENST00000402050.7, ENST00000404984.5, ENST00000415271.6, ENST00000422276.3, ENST00000423196.1, ENST00000423395.5, ENST00000427817.1, ENST00000438376.6, ENST00000470731.5, ENST00000476665.5, ENST00000486730.1, ENST00000490913.1, ENST00000497572.1, ENST00000611775.4, ENST00000623361.3

Found 1237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCACGCCCGGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCATaGAGCTTGGGAGTGCAGAGGCCGCACACATGGGGTGACGGGGAC +
Preference number: 1 (lower is better)
Translates to: PHARPSPAQPSPAQP*SLGVQRPHTWGDGD
Trigger: GTCCCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCCGGGCGTGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp CCCGGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCATGGAGCTTaGGAGTGCAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCA +
Preference number: 1 (lower is better)
Translates to: PGPAQPSPAQPSHGA*ECRGRTHGVTGTVP
Trigger: TGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp AGGTGTGCCCGCAGAGCGGACTGGATGATGACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGG +
Preference number: 1 (lower is better)
Translates to: RCARRADWMMTMASS*TGLPVAWAMGLGTR
Trigger: CCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGCACACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp CCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCATGGAGCTTGGGAGTaGAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACC +
Preference number: 1 (lower is better)
Translates to: PAQPSPAQPSHGAWE*RGRTHGVTGTVPDT
Trigger: GGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GTAGCACTGTGCCTGGCCCGGGCCAGGTGTGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCCTCCTGCACAGGGCTGCCCGTGGCC +
Preference number: 1 (lower is better)
Translates to: VALCLARARCARRAD*MMTMASSCTGLPVA
Trigger: GGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCCAGGCACAGTGCTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 90 bp CACAGCCCCTCGGAGACGCTCGTGGTCCTTGTTGCGGTCCCCTCGTaGCTGTCTGTGCAGCGCAGAGCTGGATGCAAGGCAGGCTGGCGG +
Preference number: 1 (lower is better)
Translates to: HSPSETLVVLVAVPS*LSVQRRAGCKAGWR
Trigger: CCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp CGGAGACGCTCGTGGTCCTTGTTGCGGTCCCCTCGTGGCTGTCTGTaGAGCGCAGAGCTGGATGCAAGGCAGGCTGGCGGGTGTGATCTG +
Preference number: 1 (lower is better)
Translates to: RRRSWSLLRSPRGCL*SAELDARQAGGCDL
Trigger: CAGATCACACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp GCCCCTCCTCGCTGGAATCCGGCGGCCAGTCTTGCTCGCAGTGCCTaGTGCTGGGAGTGGGAGCTGGGAGCTCTTGGGCCTTATGAGGAA +
Preference number: 1 (lower is better)
Translates to: APPRWNPAASLARSA*CWEWELGALGPYEE
Trigger: TTCCTCATAAGGCCCAAGAGCTCCCAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGATTCCAGCGAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp CCACCTCTTCTGCCTTGTGGGGACCACCCAAGCCCTCTCCCGACTTaGCCAGAGGCTGCACGCCTCTCTGGCATCACAGTCCGCACGGAG +
Preference number: 1 (lower is better)
Translates to: PPLLPCGDHPSPLPT*PEAARLSGITVRTE
Trigger: CTCCGTGCGGACTGTGATGCCAGAGAGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp AGCCCAGCCCAGCCATGGAGCTTGGGAGTGCAGAGGCCGCACACATaGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCA +
Preference number: 1 (lower is better)
Translates to: SPAQPWSLGVQRPHT*GDGDCPRHQMQHAP
Trigger: TGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp TCTGTCAGACAGTCAGGAGTGCCGCCGGGGACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAGTTCAGGGCCTGGGTCAGACTTCCT +
Preference number: 1 (lower is better)
Translates to: SVRQSGVPPGTPVHA*SQVRGEFRAWVRLP
Trigger: AGGAAGTCTGACCCAGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp GGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATaGTGTCCCTTGGAACGGCGAGCCTGCCTCCTCACCCTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: GLSQTPDATRPTTSL*CPLERRACLLTLLS
Trigger: GGAGAGGAGGGTGAGGAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp CTCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTaGCAGCAGCCCCCACAGCTCCGCCCAGCCCACTCCACCAGCTTG +
Preference number: 1 (lower is better)
Translates to: LSTSSPPGVVYFPRP*QQPPQLRPAHSTSL
Trigger: CAAGCTGGTGGAGTGGGCTGGGCGGAGCTGTGGGGGCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp GGAGAGCACACCTCCGGGTACTGCACCTGTGGCTCACCAGCCACCTaGACGGGGCCAGCTTCAGCCTCAGCAGTGTCAGCTCAACAGACG +
Preference number: 1 (lower is better)
Translates to: GEHTSGYCTCGSPAT*TGPASASAVSAQQT
Trigger: CGTCTGTTGAGCTGACACTGCTGAGGCTGAAGCTGGCCCCGTGCAGGTGGCTGGTGAGCCACAGGTGCAGTACCCGGAGGTGTGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GTCCGCTCTTCCTTCAGGTCTCTCACAGCCCCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAG +
Preference number: 1 (lower is better)
Translates to: VRSSFRSLTAPRRRS*SLLRSPRGCLCSAE
Trigger: CTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAGACCTGAAGGAAGAGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 90 bp CACTCACCCCAGGCCTGCGGGAACGGTGGTCTTGGTGGTCTTCTCTaGCCCTTCCACCTCTTCTGCCTTGTGGGGACCACCCAAGCCCTC +
Preference number: 1 (lower is better)
Translates to: HSPQACGNGGLGGLL*PFHLFCLVGTTQAL
Trigger: GAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp CCTTCAGGTCTCTCACAGCCCCTCGGAGACGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGCTGGATGCAA +
Preference number: 1 (lower is better)
Translates to: PSGLSQPLGDARGPC*GPLVAVCAAQSWMQ
Trigger: TTGCATCCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAGACCTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp GGGAACGGTGGTCTTGGTGGTCTTCTCTGGCCCTTCCACCTCTTCTaGCTTGTGGGGACCACCCAAGCCCTCTCCCGACTTGCCCAGAGG +
Preference number: 1 (lower is better)
Translates to: GNGGLGGLLWPFHLF*LVGTTQALSRLAQR
Trigger: CCTCTGGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp TGTCCAACACCGGGCCCTGGGTTGGAGTTTAGCCCTGCTTGGCTCTaGCCGCTAGTCTCAGTCAGGTCACTCACCCCAGGCCTGCGGGAA +
Preference number: 1 (lower is better)
Translates to: CPTPGPGLEFSPAWL*PLVSVRSLTPGLRE
Trigger: TTCCCGCAGGCCTGGGGTGAGTGACCTGACTGAGACTAGCGGGCAGAGCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTGTTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTCGTaGGCAGGCGGCAAGGTGCTGTCAGAGAACGTGTCACTACAGGGC +
Preference number: 1 (lower is better)
Translates to: VSALVADSSSSRSRS*AGGKVLSENVSLQG
Trigger: GCCCTGTAGTGACACGTTCTCTGACAGCACCTTGCCGCCTGCCCACGACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp AGGGCTTTCGAGGTGGACTGGCTCCTAGGACCTGAAGCTTTGAGCTaGCAAGCAGGGATGGCTTGGGACAGCGCCCCAGGGAGTGGACCC +
Preference number: 1 (lower is better)
Translates to: RAFEVDWLLGPEALS*QAGMAWDSAPGSGP
Trigger: GGGTCCACTCCCTGGGGCGCTGTCCCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GTGGTCTTGGTGGTCTTCTCTGGCCCTTCCACCTCTTCTGCCTTGTaGGGACCACCCAAGCCCTCTCCCGACTTGCCCAGAGGCTGCACG +
Preference number: 1 (lower is better)
Translates to: VVLVVFSGPSTSSAL*GPPKPSPDLPRGCT
Trigger: CGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp TGGTCCCAGCCCCTCCCTGCACTCTCTCCGCAGCTGTCTGGTGGGTaGTGTGAACCAAGGGACACCCAGGGTCATGGCACTGCCTGGATT +
Preference number: 1 (lower is better)
Translates to: WSQPLPALSPQLSGG*CEPRDTQGHGTAWI
Trigger: AATCCAGGCAGTGCCATGACCCTGGGTGTCCCTTGGTTCACATCACCCACCAGACAGCTGCGGAGAGAGTGCAGGGAGGGGCTGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp AGGCACTGCCAGCAGGCCCTTGGGAGCTTGGCGAGGTGGGAGCCTTaGGAAATAGCTGGCTCGGACCCATGGCGGGGTTTGTGTGTCAAC +
Preference number: 1 (lower is better)
Translates to: RHCQQALGSLARWEP*EIAGSDPWRGLCVN
Trigger: GTTGACACACAAACCCCGCCATGGGTCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGCCAAGCTCCCAAGGGCCTGCTGGCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp TGCCGCGGCTGGGATCCAGGAGCTGCTCTATCTGCCGGTCCTTCCTaGTGTTTTCCTCCTCCAGGCGCCGGAGCTTCGTTCTCATCAGGT +
Preference number: 1 (lower is better)
Translates to: CRGWDPGAALSAGPS*CFPPPGAGASFSSG
Trigger: ACCTGATGAGAACGAAGCTCCGGCGCCTGGAGGAGGAAAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAGCCGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp CGAACAAAATCCGTGCCGCGGCTGGGATCCAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTTTCCTCCTCCAGGCGCCGGAGCTTC +
Preference number: 1 (lower is better)
Translates to: RTKSVPRLGSRSCSI*RSFLLFSSSRRRSF
Trigger: GAAGCTCCGGCGCCTGGAGGAGGAAAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATTTTGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp TGCAGGAGCTGCTTCACCTCCAAATCTCTCTGCAGCAGCTGCTCCTaGAGCGCGGTCCGCTCTTCCTTCAGGTCTCTCACAGCCCCTCGG +
Preference number: 1 (lower is better)
Translates to: CRSCFTSKSLCSSCS*SAVRSSFRSLTAPR
Trigger: CCGAGGGGCTGTGAGAGACCTGAAGGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGTGAAGCAGCTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp CGGATAGCAGCTCCTCACGGTCAAGGTCGTGGGCAGGCGGCAAGGTaGTGTCAGAGAACGTGTCACTACAGGGCTCCCTGGCATCTGCGA +
Preference number: 1 (lower is better)
Translates to: RIAAPHGQGRGQAAR*CQRTCHYRAPWHLR
Trigger: TCGCAGATGCCAGGGAGCCCTGTAGTGACACGTTCTCTGACAGCACCTTGCCGCCTGCCCACGACCTTGACCGTGAGGAGCTGCTATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp TCAGTCAGGTCACTCACCCCAGGCCTGCGGGAACGGTGGTCTTGGTaGTCTTCTCTGGCCCTTCCACCTCTTCTGCCTTGTGGGGACCAC +
Preference number: 1 (lower is better)
Translates to: SVRSLTPGLRERWSW*SSLALPPLLPCGDH
Trigger: GTGGTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTGACCTGACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GTCTCAGTCAGGTCACTCACCCCAGGCCTGCGGGAACGGTGGTCTTaGTGGTCTTCTCTGGCCCTTCCACCTCTTCTGCCTTGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: VSVRSLTPGLRERWS*WSSLALPPLLPCGD
Trigger: GTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTGACCTGACTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GCAGGCCCTTGGGAGCTTGGCGAGGTGGGAGCCTTGAGAAATAGCTaGCTCGGACCCATGGCGGGGTTTGTGTGTCAACTCCCTGGTCCT +
Preference number: 1 (lower is better)
Translates to: AGPWELGEVGALRNS*LGPMAGFVCQLPGP
Trigger: AGGACCAGGGAGTTGACACACAAACCCCGCCATGGGTCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGCCAAGCTCCCAAGGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp TGCACGGGGCCAGCTTCAGCCTCAGCAGTGTCAGCTCAACAGACGTaGCTGCTGTCAACACAGTGGGGCCAGGCCCTGGAGACTGACATC +
Preference number: 1 (lower is better)
Translates to: CTGPASASAVSAQQT*LLSTQWGQALETDI
Trigger: GATGTCAGTCTCCAGGGCCTGGCCCCACTGTGTTGACAGCAGTCACGTCTGTTGAGCTGACACTGCTGAGGCTGAAGCTGGCCCCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp CCAGCCCCTCCCTGCACTCTCTCCGCAGCTGTCTGGTGGGTGATGTaGACCAAGGGACACCCAGGGTCATGGCACTGCCTGGATTCAGTT +
Preference number: 1 (lower is better)
Translates to: PAPPCTLSAAVWWVM*TKGHPGSWHCLDSV
Trigger: AACTGAATCCAGGCAGTGCCATGACCCTGGGTGTCCCTTGGTTCACATCACCCACCAGACAGCTGCGGAGAGAGTGCAGGGAGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp GGGAGCAGCTGCCACAAGAGAACGGAGGGTCTCCCCCAGCGAATGTaGAGGTGTCTCACTTTCTCAGGGCTTTCGAGGTGGACTGGCTCC +
Preference number: 1 (lower is better)
Translates to: GSSCHKRTEGLPQRM*RCLTFSGLSRWTGS
Trigger: GGAGCCAGTCCACCTCGAAAGCCCTGAGAAAGTGAGACACCTGCACATTCGCTGGGGGAGACCCTCCGTTCTCTTGTGGCAGCTGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp CGGGGCCAGCTTCAGCCTCAGCAGTGTCAGCTCAACAGACGTGACTaGTGTCAACACAGTGGGGCCAGGCCCTGGAGACTGACATCTCCT +
Preference number: 1 (lower is better)
Translates to: RGQLQPQQCQLNRRD*CQHSGARPWRLTSP
Trigger: AGGAGATGTCAGTCTCCAGGGCCTGGCCCCACTGTGTTGACAGCAGTCACGTCTGTTGAGCTGACACTGCTGAGGCTGAAGCTGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp CCGCTAGTCTCAGTCAGGTCACTCACCCCAGGCCTGCGGGAACGGTaGTCTTGGTGGTCTTCTCTGGCCCTTCCACCTCTTCTGCCTTGT +
Preference number: 1 (lower is better)
Translates to: PLVSVRSLTPGLRER*SWWSSLALPPLLPC
Trigger: ACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTGACCTGACTGAGACTAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp CTACTTTGTCCAACACCGGGCCCTGGGTTGGAGTTTAGCCCTGCTTaGCTCTGCCCGCTAGTCTCAGTCAGGTCACTCACCCCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: LLCPTPGPGLEFSPA*LCPLVSVRSLTPGL
Trigger: CAGGCCTGGGGTGAGTGACCTGACTGAGACTAGCGGGCAGAGCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTGTTGGACAAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp GGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTaGCGGGGACCTAAACTGGAAAGTTCTTCGTGGGCAGAGACGGTG +
Preference number: 1 (lower is better)
Translates to: GSYVLGSAAITAWRQ*RGPKLESSSWAETV
Trigger: CACCGTCTCTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR TCA 90 bp AAGCCACTGTGTTGGGGCCATCGGCCTTCTGACCGCCACAGAGAATaGCCCAGGCTCAGCTTAGGTGACTCAGAAGGCCGCCATGCTGCA +
Preference number: 1 (lower is better)
Translates to: KPLCWGHRPSDRHRE*PRLSLGDSEGRHAA
Trigger: TGCAGCATGGCGGCCTTCTGAGTCACCTAAGCTGAGCCTGGGTCATTCTCTGTGGCGGTCAGAAGGCCGATGGCCCCAACACAGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp GTCTCACTTTCTCAGGGCTTTCGAGGTGGACTGGCTCCTAGGACCTaGAGCTTTGAGCTGGCAAGCAGGGATGGCTTGGGACAGCGCCCC +
Preference number: 1 (lower is better)
Translates to: VSLSQGFRGGLAPRT*SFELASRDGLGQRP
Trigger: GGGGCGCTGTCCCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGCCCTGAGAAAGTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp AAGCCGGTCTCACACCTTCCTAAGGCACAGCGGGGTGTGTCTGCCTaGCCTGCTGGGCTGAGATCGAGCAAATCCTGGTTGTTGAGGGTG +
Preference number: 1 (lower is better)
Translates to: KPVSHLPKAQRGVSA*PAGLRSSKSWLLRV
Trigger: CACCCTCAACAACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACACACCCCGCTGTGCCTTAGGAAGGTGTGAGACCGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GTGTCTTTAGCTCCTCACTGGCTTGGGACAGGCCGTGTTTTGCTGTaGGGATGGGGGAAGCCGGTCTCACACCTTCCTAAGGCACAGCGG +
Preference number: 1 (lower is better)
Translates to: VSLAPHWLGTGRVLL*GWGKPVSHLPKAQR
Trigger: CCGCTGTGCCTTAGGAAGGTGTGAGACCGGCTTCCCCCATCCCCACAGCAAAACACGGCCTGTCCCAAGCCAGTGAGGAGCTAAAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp TTTAAGGGTGCTTACCCAGCCGTGGTCTGTACCAGACAGGGTAGTTaGCACAGCGTAGGCACTGCCAGCAGGCCCTTGGGAGCTTGGCGA +
Preference number: 1 (lower is better)
Translates to: FKGAYPAVVCTRQGS*HSVGTASRPLGAWR
Trigger: TCGCCAAGCTCCCAAGGGCCTGCTGGCAGTGCCTACGCTGTGCCAACTACCCTGTCTGGTACAGACCACGGCTGGGTAAGCACCCTTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp GCTCCCTGGCATCTGCGAGTTCACGGCAGATGTGTCTGTTGGCACTaGAAATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCG +
Preference number: 1 (lower is better)
Translates to: APWHLRVHGRCVCWH*KSTIRAAAGDEGDA
Trigger: CGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATTTTCAGTGCCAACAGACACATCTGCCGTGAACTCGCAGATGCCAGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp CTGCTTCAGCCCGTTAATGACCCAACTGGCATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATCCGTGCCGCGGCTGGGATCCAGGAG +
Preference number: 1 (lower is better)
Translates to: LLQPVNDPTGIGPFL*QSPNKIRAAAGIQE
Trigger: CTCCTGGATCCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGATGCCAGTTGGGTCATTAACGGGCTGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp GGAGGCCTCTCCGCTTGGTACTGTCTCCATGGAACAAAACCACACTaGAGCGTTCCAGGACCACAGAACAGCCAGGCAGGCTGTACCCAG +
Preference number: 1 (lower is better)
Translates to: GGLSAWYCLHGTKPH*SVPGPQNSQAGCTQ
Trigger: CTGGGTACAGCCTGCCTGGCTGTTCTGTGGTCCTGGAACGCTGCAGTGTGGTTTTGTTCCATGGAGACAGTACCAAGCGGAGAGGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp TGGGGAGACAGCGTCCTACAAAGGCCTCCTAAGAGCTGTGCCCTGTaGCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: WGDSVLQRPPKSCAL*QESLLYLQGCPWSP
Trigger: AGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAGGGCACAGCTCTTAGGAGGCCTTTGTAGGACGCTGTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp AGGAGTCCCAGGGACATGACCGTTGCTGGCAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGTGTCTGTCAGACAGTCAGGAGTGCC +
Preference number: 1 (lower is better)
Translates to: RSPRDMTVAGRAPEM*PLHSEGVCQTVRSA
Trigger: GGCACTCCTGACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCTGCCAGCAACGGTCATGTCCCTGGGACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR TCA 90 bp TGTGCAGCGCAGAGCTGGATGCAAGGCAGGCTGGCGGGTGTGATCTaGCTGGCTCTGCGGCGTGTGATTTTGAGCTCTCCATCACACTTA +
Preference number: 1 (lower is better)
Translates to: CAAQSWMQGRLAGVI*LALRRVILSSPSHL
Trigger: TAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR TCA 90 bp GACAATCAGTACACCGTGAACAACACCTGCCACCAACGTCGACCCTaGAGTGGTAGATGGGGCCTGCTTTGGCACTTGACGCTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: DNQYTVNNTCHQRRP*SGRWGLLWHLTLGQ
Trigger: CTGCCCCAGCGTCAAGTGCCAAAGCAGGCCCCATCTACCACTTCAGGGTCGACGTTGGTGGCAGGTGTTGTTCACGGTGTACTGATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp GAGCACGTCCCGCAGAAACAGCTTGGTTTAACAAGTGGGAGCAGCTaGCACAAGAGAACGGAGGGTCTCCCCCAGCGAATGTGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: EHVPQKQLGLTSGSS*HKRTEGLPQRMCRC
Trigger: ACACCTGCACATTCGCTGGGGGAGACCCTCCGTTCTCTTGTGGCAGCTGCTCCCACTTGTTAAACCAAGCTGTTTCTGCGGGACGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGACCTAAACTaGAAAGTTCTTCGTGGGCAGAGACGGTGCAATGACAATATCGTC +
Preference number: 1 (lower is better)
Translates to: AALPSRRGDSDGDLN*KVLRGQRRCNDNIV
Trigger: GACGATATTGTCATTGCACCGTCTCTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 90 bp GCGAATGTGCAGGTGTCTCACTTTCTCAGGGCTTTCGAGGTGGACTaGCTCCTAGGACCTGAAGCTTTGAGCTGGCAAGCAGGGATGGCT +
Preference number: 1 (lower is better)
Translates to: ANVQVSHFLRAFEVD*LLGPEALSWQAGMA
Trigger: AGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGCCCTGAGAAAGTGAGACACCTGCACATTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp CAGCTCAACAGACGTGACTGCTGTCAACACAGTGGGGCCAGGCCCTaGAGACTGACATCTCCTGTGGCTGCTTGTTTAAAGGGCATGGGA +
Preference number: 1 (lower is better)
Translates to: QLNRRDCCQHSGARP*RLTSPVAACLKGMG
Trigger: TCCCATGCCCTTTAAACAAGCAGCCACAGGAGATGTCAGTCTCCAGGGCCTGGCCCCACTGTGTTGACAGCAGTCACGTCTGTTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp CCAGCAAAGGGGACTGGTGACCAGCACTGGACACTGGGCATCAGCTaGAGACACTGGCTTGAGAATGCATTGCCATTTACCCAGCGAGCT +
Preference number: 1 (lower is better)
Translates to: PAKGTGDQHWTLGIS*RHWLENALPFTQRA
Trigger: AGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGTCCAGTGCTGGTCACCAGTCCCCTTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp CGTCTTCTTCTCCCCCAGGGGCTTCTTTCCGGTGGTTTCAGAACTTaGCAAGAGGGTCTGGAGACGATGCACCTCCTCGTAGTATGTCTC +
Preference number: 1 (lower is better)
Translates to: RLLLPQGLLSGGFRT*QEGLETMHLLVVCL
Trigger: GAGACATACTACGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCCTGGGGGAGAAGAAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR TCA 90 bp CCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCCAAGCCTaGGGCAGGAAAGCCCTCTCCATGCCTGTAACCCAAAGCTCTAGG +
Preference number: 1 (lower is better)
Translates to: PEDMAVYVWNIGLQA*GRKALSMPVTQSSR
Trigger: CCTAGAGCTTTGGGTTACAGGCATGGAGAGGGCTTTCCTGCCTCAGGCTTGGAGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp CAAGGTGCTGTCAGAGAACGTGTCACTACAGGGCTCCCTGGCATCTaGGAGTTCACGGCAGATGTGTCTGTTGGCACTGAAAATCCACCA +
Preference number: 1 (lower is better)
Translates to: QGAVRERVTTGLPGI*EFTADVSVGTENPP
Trigger: TGGTGGATTTTCAGTGCCAACAGACACATCTGCCGTGAACTCGCAGATGCCAGGGAGCCCTGTAGTGACACGTTCTCTGACAGCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GCAGGCTGTACCCAGCAAAGGGGACTGGTGACCAGCACTGGACACTaGGCATCAGCTGAAGACACTGGCTTGAGAATGCATTGCCATTTA +
Preference number: 1 (lower is better)
Translates to: AGCTQQRGLVTSTGH*ASAEDTGLRMHCHL
Trigger: TAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGTCCAGTGCTGGTCACCAGTCCCCTTTGCTGGGTACAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp ATATCGGTCTGGAGTTTGCTGATGGTGCCGTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATCCTCTGCTTCAGCCCGTTAATGACC +
Preference number: 1 (lower is better)
Translates to: ISVWSLLMVPSFSLH*CSSFRILCFSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCACCATCAGCAAACTCCAGACCGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 90 bp TGGATGCTGGCTTTTAAAAGAGCAGCCCAGCTGCACCAGAGGACATaGCGGTTTATGTATGGAACATTGGCCTCCAAGCCTGAGGCAGGA +
Preference number: 1 (lower is better)
Translates to: WMLAFKRAAQLHQRT*RFMYGTLASKPEAG
Trigger: TCCTGCCTCAGGCTTGGAGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp AGTGACGGGGACCTAAACTGGAAAGTTCTTCGTGGGCAGAGACGGTaGAATGACAATATCGTCGGAATCATCGGAGTTGACGTCATCCCC +
Preference number: 1 (lower is better)
Translates to: SDGDLNWKVLRGQRR*NDNIVGIIGVDVIP
Trigger: GGGGATGACGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 90 bp GGCTTGAGAATGCATTGCCATTTACCCAGCGAGCTTCAAGATGGATaGTGGCTTTTAAAAGAGCAGCCCAGCTGCACCAGAGGACATGGC +
Preference number: 1 (lower is better)
Translates to: GLRMHCHLPSELQDG*WLLKEQPSCTRGHG
Trigger: GCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp AGCGAGCTTCAAGATGGATGCTGGCTTTTAAAAGAGCAGCCCAGCTaGACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: SELQDGCWLLKEQPS*TRGHGGLCMEHWPP
Trigger: TGGAGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp TTGAGAATGCATTGCCATTTACCCAGCGAGCTTCAAGATGGATGCTaGCTTTTAAAAGAGCAGCCCAGCTGCACCAGAGGACATGGCGGT +
Preference number: 1 (lower is better)
Translates to: LRMHCHLPSELQDGC*LLKEQPSCTRGHGG
Trigger: ACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTGGGTAAATGGCAATGCATTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp CACTGGCTTGAGAATGCATTGCCATTTACCCAGCGAGCTTCAAGATaGATGCTGGCTTTTAAAAGAGCAGCCCAGCTGCACCAGAGGACA +
Preference number: 1 (lower is better)
Translates to: HWLENALPFTQRASR*MLAFKRAAQLHQRT
Trigger: TGTCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 90 bp TTTGCTGCTGTTCTTGAAGTTCAAGGTGATGTGGAGGTGTTGCAGTaGCAATCAGTACACCGTGAACAACACCTGCCACCAACGTCGACC +
Preference number: 1 (lower is better)
Translates to: FAAVLEVQGDVEVLQ*QSVHREQHLPPTST
Trigger: GGTCGACGTTGGTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCACCTTGAACTTCAAGAACAGCAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp ACAGCTTTGCTGCTGTTCTTGAAGTTCAAGGTGATGTGGAGGTGTTaGAGTGACAATCAGTACACCGTGAACAACACCTGCCACCAACGT +
Preference number: 1 (lower is better)
Translates to: TALLLFLKFKVMWRC*SDNQYTVNNTCHQR
Trigger: ACGTTGGTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCACCTTGAACTTCAAGAACAGCAGCAAAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 90 bp GAAACAATAACACGGTTTTACTCAACAAACAAACAGGAGAAATGCTaGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGC +
Preference number: 1 (lower is better)
Translates to: ETITRFYSTNKQEKC*PEGGSHLGPVGAES
Trigger: GCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTTGTTTGTTGAGTAAAACCGTGTTATTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611775.4
3UTR TCA 90 bp ATGCCAAAGACCAGCGGGTCCACTCCTTCCTCTCCTAAGCCATCTTaGCAGTTTCACATTTCAGCTTCCAGACGTCATTTCTGTTGCTTT +
Preference number: 1 (lower is better)
Translates to: MPKTSGSTPSSPKPS*QFHISASRRHFCCF
Trigger: AAAGCAACAGAAATGACGTCTGGAAGCTGAAATGTGAAACTGTCAAGATGGCTTAGGAGAGGAAGGAGTGGACCCGCTGGTCTTTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp AAGGAAACAATAACACGGTTTTACTCAACAAACAAACAGGAGAAATaGTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: KETITRFYSTNKQEK*WPEGGSHLGPVGAE
Trigger: CTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTTGTTTGTTGAGTAAAACCGTGTTATTGTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611775.4
3UTR TCA 90 bp TCTTTCTTCATTTCTTGCAATTCTTGGAGCTTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACCTCCTCTCGCTCTCTCCTCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SFFISCNSWSLLVSV*ISSLKTSSRSLLSS
Trigger: GGAGGAGAGGAGAGAGCGAGAGGAGGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 90 bp ATAGCAGATACAGCTTTGCTGCTGTTCTTGAAGTTCAAGGTGATGTaGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGC +
Preference number: 1 (lower is better)
Translates to: IADTALLLFLKFKVM*RCCSDNQYTVNNTC
Trigger: GCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCACCTTGAACTTCAAGAACAGCAGCAAAGCTGTATCTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 90 bp GGTGCTTTCTGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTaGTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTATCTTT +
Preference number: 1 (lower is better)
Translates to: GAFCRFLFLKNAAKL*CAYLGGSELGWAIF
Trigger: AAAGATAGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCAGAAAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp GCCCGGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCATGGAGCTaGGGAGTGCAGAGGCCGCACACATGGGGTGACGGGGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: ARPSPAQPSPAQPWS*GVQRPHTWGDGDCP
Trigger: GGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCCGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTCGGGAAAGGACGGTGTaGGCGGGTGGGGCATGGAGT +
Preference number: 2 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFRERTV*AGGAWS
Trigger: ACTCCATGCCCCACCCGCTCACACCGTCCTTTCCCG...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CTGGCCGCGGCGTCTCTTCTCCCATCAGAGCAGGGGGAGCGGGGCCGCGGGAGCAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACC +
Preference number: 2 (lower is better)
Translates to: LAAASLLPSEQGERGRGSSFRIL*FSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCT...GCTCCCGCGGCCCCGCTCCCCCTGCTCTGATGGGAGAAGAGACGCCGCGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCACAGCGGGGTGTGTCTaGCTGGCCTGCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSTAGCV*LACWAE
Trigger: CTCAGCCCAGCAGGCCAGGCAGACACACCCCGCTGT...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACAGGAGAGCTCTGGTCCTGTGTCTTGGAGATaGTTGGGGAGGTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: CPWPGRWGSERGAQESSGPVSWR*LGRCSA
Trigger: TGCTGAGCACCTCCCCAACCATCTCCAAGACACAGG...ACCAGAGCTCTCCTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 90 bp TCCACCTCTTCTGCCTTGTGGGGACCACCCAAGCCCTCTCCCGACTaGCCCAGAGGCTGCACGCCTCTCTGGCATCACAGTCCGCACGGA +
Preference number: 2 (lower is better)
Translates to: STSSALWGPPKPSPD*PRGCTPLWHHSPHG
Trigger: TCCGTGCGGACTGTGATGCCAGAGAGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACACAGCGGGGTGTGTCTaGCTGGCCTGCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHTAGCV*LACWAE
Trigger: CTCAGCCCAGCAGGCCAGGCAGACACACCCCGCTGT...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp TCCTTCAGGTCTCTCACAGCCCCTCGGAGACGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGCTGGATGCA +
Preference number: 2 (lower is better)
Translates to: SFRSLTAPRRRSWSL*RSPRGCLCSAELDA
Trigger: TGCATCCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAGACCTGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 90 bp ACGGTGGTCTTGGTGGTCTTCTCTGGCCCTTCCACCTCTTCTGCCTaGTGGGGACCACCCAAGCCCTCTCCCGACTTGCCCAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: TVVLVVFSGPSTSSA*WGPPKPSPDLPRGC
Trigger: GCAGCCTCTGGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCCCATTGGGTCTCTCCTaGGACAGCGGCCAGCCCCGG +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSPLGLS*DSGQPR
Trigger: CCGGGGCTGGCCGCTGTCTCAGGAGAGACCCAATGG...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTTGTGTCTGCCTGGCCTaGTGGGCTGAGATCGAGCAA +
Preference number: 2 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFCVCLA*WAEIEQ
Trigger: TTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACACA...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGTCCCAGACACCAGATaGAACACGCCCCACCACGAG +
Preference number: 2 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSVPDTR*NTPHHE
Trigger: CTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGAC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACAGGAGAGCTCTGGTGGGGCTTCTTTCCGGTaGTTTCAGAACTTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: CPWPGRWGSERGAQESSGGASFR*FQNLPR
Trigger: TCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCC...ACCAGAGCTCTCCTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 90 bp TCTTCCTTCAGGTCTCTCACAGCCCCTCGGAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGCTGGAT +
Preference number: 2 (lower is better)
Translates to: SSFRSLTAPRRRSWS*LRSPRGCLCSAELD
Trigger: ATCCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAGACCTGAAGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 90 bp GGTGTGTCTGCCTGGCCTGCTGGGCTGAGATCGAGCAAATCCTGGTaGTTGAGGGTGTCACCAGGAAGAGGGGGCATGGTGTCGGCGCTG +
Preference number: 2 (lower is better)
Translates to: GVSAWPAGLRSSKSW*LRVSPGRGGMVSAL
Trigger: CAGCGCCGACACCATGCCCCCTCTTCCTGGTGACACCCTCAACAACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TCTTGTGCTTGTACACCTTCCACTGGGCCTGCAGGACTCTGGCCGCGGCGTCTCTCTGGTTCTCTTCCGTaGGCTCCTGGACACTCCGGG +
Preference number: 2 (lower is better)
Translates to: SCACTPSTGPAGLWPRRLSGSLP*APGHSG
Trigger: CCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGA...GAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR TCA 90 bp ACTCTGGCCGCGGCGTCTCTTCTCCCATCAGAGCAGGGGGAGCGGGGCCGCGGGTTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACC +
Preference number: 2 (lower is better)
Translates to: TLAAASLLPSEQGERGRGLLVSV*ISSLKT
Trigger: GGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAA...CCCGCGGCCCCGCTCCCCCTGCTCTGATGGGAGAAGAGACGCCGCGGCCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGGGCAGGCGGCAAGGTaGTGTCAGAGAACGTGTCAC +
Preference number: 2 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHGQAAR*CQRTCH
Trigger: GTGACACGTTCTCTGACAGCACCTTGCCGCCTGCCC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCGGGTGGGGCGGGTCCTaGACTTTGGGTGGCCCCATC +
Preference number: 2 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVGWGGS*TLGGPI
Trigger: GATGGGGCCACCCAAAGTGCAGGACCCGCCCCACCC...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TGCCTGGCCCGGGCCAGGTGTGCCCGCAGAGCGGACTGGATGATGACGATGGCCCGTAGTATGTCTCCATaGCGATCCGCATCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: CLARARCARRADWMMTMARSMSP*RSASLP
Trigger: TGGAAGAGATGCGGATCGCCATGGAGACATACTACG...GGCCATCGTCATCATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATCACTACAGGGCTCCCTaGCATCTGCGAGTTCACGGC +
Preference number: 2 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYHYRAP*HLRVHG
Trigger: GCCGTGAACTCGCAGATGCCAGGGAGCCCTGTAGTG...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCGGCCTCTGCAGCTGCTaGCTCCACAGGCTCCGCACG +
Preference number: 2 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVGLCSC*LHRLRT
Trigger: CGTGCGGAGCCTGTGGAGCCAGCAGCTGCAGAGGCC...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp GTGTCTGCCTGGCCTGCTGGGCTGAGATCGAGCAAATCCTGGTTGTaGAGGGTGTCACCAGGAAGAGGGGGCATGGTGTCGGCGCTGGTT +
Preference number: 2 (lower is better)
Translates to: VSAWPAGLRSSKSWL*RVSPGRGGMVSALV
Trigger: AACCAGCGCCGACACCATGCCCCCTCTTCCTGGTGACACCCTCAACAACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp AGTCTCAGTCAGGTCACTCACCCCAGGCCTGCGGGAACGGTGGTCTaGGTGGTCTTCTCTGGCCCTTCCACCTCTTCTGCCTTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: SLSQVTHPRPAGTVV*VVFSGPSTSSALWG
Trigger: TCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTGACCTGACTGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTGGGTGGCCCCATCCCTaGGTGACTGGGAGAGAACAG +
Preference number: 2 (lower is better)
Translates to: LCQESLLYLQGCPWSPPAGWPHP*VTGREQ
Trigger: CTGTTCTCTCCCAGTCACTCAGGGATGGGGCCACCC...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp ACTCTGGCCGCGGCGTCTCTTCTCCCATCAGAGCAGGGGGAGCGGGGCCGCGGGTCGCTCTTCTGCACGTaGAATGACTTCTTTAACTCA +
Preference number: 2 (lower is better)
Translates to: TLAAASLLPSEQGERGRGSLFCT*NDFFNS
Trigger: TGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGA...CCCGCGGCCCCGCTCCCCCTGCTCTGATGGGAGAAGAGACGCCGCGGCCAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp TCTTGTGCTTGTACACCTTCCACTGGGCCTGCAGGACTCTGGCCGCGGCGTCTCCTGGGTCAGACTTCCTaGCTTTGCGGTTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SCACTPSTGPAGLWPRRLLGQTS*LCGSQP
Trigger: TGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAG...GAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCGCCTATGCTGTCCCTTaGAACGGCGAGCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSAYAVP*NGEPAS
Trigger: GGAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGC...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp TTTCTCAGGGCTTTCGAGGTGGACTGGCTCCTAGGACCTGAAGCTTaGAGCTGGCAAGCAGGGATGGCTTGGGACAGCGCCCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: FLRAFEVDWLLGPEA*SWQAGMAWDSAPGS
Trigger: ACTCCCTGGGGCGCTGTCCCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGCCCTGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp GTGAACCAAGGGACACCCAGGGTCATGGCACTGCCTGGATTCAGTTaGGTAATCGTCGGCAGTCTGTCCCTGGCTTCTGAGCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: VNQGTPRVMALPGFS*VIVGSLSLASEPGA
Trigger: GGCCCCAGGCTCAGAAGCCAGGGACAGACTGCCGACGATTACCAAACTGAATCCAGGCAGTGCCATGACCCTGGGTGTCCCTTGGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGCAAATCCTGGTTGTTaGGGGTGTCACCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSANPGC*GCHQEE
Trigger: CTCTTCCTGGTGACACCCTCAACAACCAGGATTTGC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACCCTGGCCTGCTGGGCTaGGATCGAGCAAATCCTGGT +
Preference number: 2 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHPGLLG*DRANPG
Trigger: ACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGG...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCCCCACTCCACCAGCTTaGTGCTCCCATGGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVPTPPA*CSHGSA
Trigger: GGCTGAGCCATGGGAGCAGCAAGCTGGTGGAGTGGG...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACGCATGGTGTCGGCGCTaGTTGCGGATAGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHAWCRR*LRIAAP
Trigger: AGGAGCTGCTATCCGCAACCAGCGCCGACACCATGC...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCCCCAGCCATGGAGCTTaGGAGTGCAGAGGCCGCACA +
Preference number: 2 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVPSHGA*ECRGRT
Trigger: TGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGG...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTGCAGACACCAGGCCTaGGCTGTGCAGGGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSCRHQA*AVQGSR
Trigger: TCTAGACCCCTGCACAGCCCAGGCCTGGTGTCTGCA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTTGCAGACACCAGGCCTaGGCTGTGCAGGGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: LCQESLLYLQGCPWSPPACRHQA*AVQGSR
Trigger: TCTAGACCCCTGCACAGCCCAGGCCTGGTGTCTGCA...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTGAGAACAGGCTGGGCTaGGGACACCTGTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LCQESLLYLQGCPWSPPAENRLG*GHLCPP
Trigger: AGGAGGACACAGGTGTCCCCAGCCCAGCCTGTTCTC...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATGTGGACCCGGGCGGGTaGGGTGAAGGCAGGGGTCTA +
Preference number: 2 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNVDPGG*GEGRGL
Trigger: TAGACCCCTGCCTTCACCCCACCCGCCCGGGTCCAC...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTGCTGGCAAGCAGGGATaGCTTGGGACAGCGCCCCAG +
Preference number: 2 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPAGKQG*LGTAPQ
Trigger: CTGGGGCGCTGTCCCAAGCCATCCCTGCTTGCCAGC...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGGCACAAAGGACAAGCTaGGCCAAGGCGGGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: NRRNAGLKEEATSVLLELAQRTS*AKAGPC
Trigger: ACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGC...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR CAA 90 bp ACCTGGGTGTCTTTAGCTCCTCACTGGCTTGGGACAGGCCGTGTTTaGCTGTGGGGATGGGGGAAGCCGGTCTCACACCTTCCTAAGGCA +
Preference number: 2 (lower is better)
Translates to: TWVSLAPHWLGTGRV*LWGWGKPVSHLPKA
Trigger: TGCCTTAGGAAGGTGTGAGACCGGCTTCCCCCATCCCCACAGCAAAACACGGCCTGTCCCAAGCCAGTGAGGAGCTAAAGACACCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TCTTGTGCTTGTACACCTTCCACTGGGCCTGCAGGACTCTGGCCGCGGCGTCTCGTGGCCTCTTCACTCTaGAGGTGTCTGTCAGACAGT +
Preference number: 2 (lower is better)
Translates to: SCACTPSTGPAGLWPRRLVASSL*RCLSDS
Trigger: ACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCAC...GAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp GGAGACGATGCACCTCCTCGTAGTATGTCTCCATGGCGATCCGCATCTCTTCCAACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: GDDAPPRSMSPWRSASLPTPVHA*SQVRGE
Trigger: CTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGT...TGGAAGAGATGCGGATCGCCATGGAGACATACTACGAGGAGGTGCATCGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCGGGCTCCCTGGCATCTaGGAGTTCACGGCAGATGTG +
Preference number: 2 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVGLPGI*EFTADV
Trigger: CACATCTGCCGTGAACTCGCAGATGCCAGGGAGCCC...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCGTCTGCCTGGCCTGCTaGGCTGAGATCGAGCAAATC +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSVCLAC*AEIEQI
Trigger: GATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGAC...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCAGCTCCTCACTGGCTTaGGACAGGCCGTGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: KARPGLRLFLLTPQQGLISSSLA*DRPCFA
Trigger: AGCAAAACACGGCCTGTCCCAAGCCAGTGAGGAGCT...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TTCAGGATCCTCTGCTTCAGCCCGTTAATGACCCAACTGGCATCGGGCCTTTTCACGCATGCTCCCAGGTaGGGGGTGAGTTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: FRILCFSPLMTQLASGLFTHAPR*GVSSGP
Trigger: AGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGT...GAAAAGGCCCGATGCCAGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACCTAGGCCTCTGCAGCTaGTGGCTCCACAGGCTCCGC +
Preference number: 2 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHLGLCS*WLHRLR
Trigger: GCGGAGCCTGTGGAGCCAGCAGCTGCAGAGGCCTAG...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTGGGGATGCGAGCCGCTaGCCCTCCCCAGAGAATAAA +
Preference number: 2 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPGDASR*PSPENK
Trigger: TTTATTCTCTGGGGAGGGCCAGCGGCTCGCATCCCC...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCTGCCTGGCCTGCTaGGCTGAGATCGAGCAAATC +
Preference number: 2 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFVCLAC*AEIEQI
Trigger: GATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGAC...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGATCATTTGGGGACCTaGGTGTCTTTAGCTCCTCAC +
Preference number: 2 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHDHLGT*VSLAPH
Trigger: GTGAGGAGCTAAAGACACCCAGGTCCCCAAATGATC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATCTTCGAACCGCAGGGTaGGGCGGGTCCTGCACTTTG +
Preference number: 2 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNLRTAG*GGSCTL
Trigger: CAAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAG...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp AGATGGTTGGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTTCAGGCTCTGGTATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATC +
Preference number: 2 (lower is better)
Translates to: RWLGRCSARGPGPPSGSGIGPFL*QSPNKI
Trigger: GATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGAT...ACCAGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp TTCTTCTCCAGCTCCACAATGCGCCTCAGCAGCCGGGGCTTGCTCCACTCCACATCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATC +
Preference number: 2 (lower is better)
Translates to: FFSSSTMRLSSRGLLHSTSFSLH*CSSFRI
Trigger: GATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGA...TGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp TTCGTGGGCAGAGACGGTGCAATGACAATATCGTCGGAATCATCGGAGTTGACGTCTCCAGCTCCACAATaGGCCTCAGCAGCCGGGGCT +
Preference number: 2 (lower is better)
Translates to: FVGRDGAMTISSESSELTSPAPQ*ASAAGA
Trigger: AGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA...CGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTTGTGTCTGCCTGGCCTaGTGGGCTGAGATCGAGCAA +
Preference number: 2 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPCVCLA*WAEIEQ
Trigger: TTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACACA...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACAGAAGGCCGCCATGCTaGAGAAAAGGCGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHRRPPC*RKGAQG
Trigger: CCCCTGGGCGCCTTTTCTGCAGCATGGCGGCCTTCT...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCACACCTCCGGGTACTaGACCTGTGGCTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHHTSGY*TCGSPA
Trigger: GGCTGGTGAGCCACAGGTGCAGTACCCGGAGGTGTG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TTCGTGGGCAGAGACGGTGCAATGACAATATCGTCGGAATCATCGGAGTTGACGCCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: FVGRDGAMTISSESSELTPRRRS*SLLRSP
Trigger: AGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGG...CGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp TTCGTGGGCAGAGACGGTGCAATGACAATATCGTCGGAATCATCGGAGTTGACGAGGCGTCCCCGTGTGTaGCTGAAGCCGATCTCCTCC +
Preference number: 2 (lower is better)
Translates to: FVGRDGAMTISSESSELTRRPRV*LKPISS
Trigger: GGAGGAGATCGGCTTCAGCCACACACGGGGACGCCT...CGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCCATCCCTGAGTGACTaGGAGAGAACAGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPPSLSD*ERTGWA
Trigger: AGCCCAGCCTGTTCTCTCCCAGTCACTCAGGGATGG...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGGCTGCACGCCTCTCTaGCATCACAGTCCGCACGGA +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHGCTPL*HHSPHG
Trigger: TCCGTGCGGACTGTGATGCCAGAGAGGCGTGCAGCC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCCATTGGGTCTCTCCTaGGACAGCGGCCAGCCCCGG +
Preference number: 2 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSPLGLS*DSGQPR
Trigger: CCGGGGCTGGCCGCTGTCTCAGGAGAGACCCAATGG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTACACTGGGCATCAGCTaGAGACACTGGCTTGAGAAT +
Preference number: 2 (lower is better)
Translates to: LCQESLLYLQGCPWSPPATLGIS*RHWLEN
Trigger: ATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGT...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCCCACCACGAGCCTATaGTGTCCCTTGGAACGGCGA +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHPTTSL*CPLERR
Trigger: TCGCCGTTCCAAGGGACAGCATAGGCTCGTGGTGGG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTCTTCTCTTCCCCTCCTaGCTAAGTCCCCGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: NAAKLCCAYLGGSELGWALLFPS*LSPRRA
Trigger: GGCCCTGCGGGGACTTAGGCAGGAGGGGAAGAGAAG...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTCACTCACCCCAGGCCTaGGGGAACGGTGGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAHSPQA*GNGGLG
Trigger: ACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTG...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATACCACAGCCAGCGCATaGGACCAGCGTCGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHTTASA*DQRRLA
Trigger: AGCCAAACGACGCTGGTCGCATGCGCTGGCTGTGGT...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCCCCGCAGAAACAGCTTaGTTTAACAAGTGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSPAETA*FNKWEQ
Trigger: CTGCTCCCACTTGTTAAACCAAGCTGTTTCTGCGGG...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACAGCTTGCTGCTCCCATaGCTCAGCCCCACTCACAGC +
Preference number: 2 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHSLLLP*LSPTHS
Trigger: GCTGTGAGTGGGGCTGAGCCATGGGAGCAGCAAGCT...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp AAACGAGCAAAGAAAAAGCTACTTTGTCCAACACCGGGCCCTGGGTaGGAGTTTAGCCCTGCTTGGCTCTGCCCGCTAGTCTCAGTCAGG +
Preference number: 2 (lower is better)
Translates to: KRAKKKLLCPTPGPG*EFSPAWLCPLVSVR
Trigger: CCTGACTGAGACTAGCGGGCAGAGCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTGTTGGACAAAGTAGCTTTTTCTTTGCTCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTGCAAATCCTGGTTGTTaGGGGTGTCACCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPANPGC*GCHQEE
Trigger: CTCTTCCTGGTGACACCCTCAACAACCAGGATTTGC...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCGAACAGACATCACCCTaGTGTTCTCAGAAGCAAGTG +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSEQTSP*CSQKQV
Trigger: CACTTGCTTCTGAGAACAGCAGGGTGATGTCTGTTC...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGGCACAGGAGAGCTCTaGTCTGGGAGGCCTGGCACG +
Preference number: 2 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSGTGEL*SGRPGT
Trigger: CGTGCCAGGCCTCCCAGACCAGAGCTCTCCTGTGCC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCAGAGGCCGCACACATaGGGTGACGGGGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSQRPHT*GDGDCP
Trigger: GGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACCGTGGACGGAAGCCTTaGGAGAAGCTGTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHRGRKP*EKLSAV
Trigger: CACAGCTGACAGCTTCTCCCAAGGCTTCCGTCCACG...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACCACAAGCCACTGTGTTaGGGCCATCGGCCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHHKPLC*GHRPSD
Trigger: GTCAGAAGGCCGATGGCCCCAACACAGTGGCTTGTG...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTTATGTATGGAACATTaGCCTCCAAGCCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSLCMEH*PPSLRQ
Trigger: CTGCCTCAGGCTTGGAGGCCAATGTTCCATACATAA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCATGGCGGTTTATGTATaGAACATTGGCCTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSMAVYV*NIGLQA
Trigger: GGCTTGGAGGCCAATGTTCCATACATAAACCGCCAT...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCGGGAACGGTGGTCTTaGTGGTCTTCTCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHRERWS*WSSLAL
Trigger: AAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTCTTGGTCTCCACAGTaGCAGAATCCAACCAAATTC +
Preference number: 2 (lower is better)
Translates to: SLLRLPRELSTFLGPASSSWSPQ*QNPTKF
Trigger: GAATTTGGTTGGATTCTGTCACTGTGGAGACCAAGA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAACCAAATTCCTTCCTaGGAAGGGCAGCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNNQIPS*EGQLWR
Trigger: CCTCCAGAGCTGCCCTTCCCAGGAAGGAATTTGGTT...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATTGTGTCTGTTGGCACTaGAAATCCACCATCCGAGCT +
Preference number: 2 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNCVCWH*KSTIRA
Trigger: AGCTCGGATGGTGGATTTTCAGTGCCAACAGACACA...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCTCCCCCAGCGAATGTaGAGGTGTCTCACTTTCTCA +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHLPQRM*RCLTFS
Trigger: TGAGAAAGTGAGACACCTGCACATTCGCTGGGGGAG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCTCTCAGAAGCAAGTGTaGTGCTGCTTTTGTAATTGG +
Preference number: 2 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFSQKQV*CCFCNW
Trigger: CCAATTACAAAAGCAGCATCACACTTGCTTCTGAGA...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGCCGCACACATGGGGTaGCGGGGACTGTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGAAHMG*RGLSQT
Trigger: TGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGC...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACACACTGGGCATCAGCTaGAGACACTGGCTTGAGAAT +
Preference number: 2 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHTLGIS*RHWLEN
Trigger: ATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGT...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATACAATCAGTACACCGTaGACAACACCTGCCACCAAC +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHTISTP*TTPATN
Trigger: GTTGGTGGCAGGTGTTGTTCACGGTGTACTGATTGT...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTCTCCCCCAGCGAATGTaGAGGTGTCTCACTTTCTCA +
Preference number: 2 (lower is better)
Translates to: NAAKLCCAYLGGSELGWALPQRM*RCLTFS
Trigger: TGAGAAAGTGAGACACCTGCACATTCGCTGGGGGAG...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTGGAACAAAACCACACTaGAGCGTTCCAGGACCACAG +
Preference number: 2 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAGTKPH*SVPGPQ
Trigger: CTGTGGTCCTGGAACGCTGCAGTGTGGTTTTGTTCC...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCAGCTCTTGGGCCTTATaGGGAACTTCCGGGCAATCC +
Preference number: 2 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSSSWAL*GTSGQS
Trigger: GGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCT...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACAGATCGAGCAAATCCTaGTTGTTGAGGGTGTCACCA +
Preference number: 2 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHRSSKS*LLRVSP
Trigger: TGGTGACACCCTCAACAACCAGGATTTGCTCGATCT...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCCTGAAGCTTTGAGCTaGCAAGCAGGGATGGCTTGG +
Preference number: 2 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSPEALS*QAGMAW
Trigger: CCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTTTCGAGGTGGACTaGCTCCTAGGACCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSAFEVD*LLGPEA
Trigger: AGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp GCCATCTTGACAGTTTCACATTTCAGCTTCCAGACGTCATTTCTGTaGCTTTTAAGGGTGCTTACCCAGCCGTGGTCTGTACCAGACAGG +
Preference number: 2 (lower is better)
Translates to: AILTVSHFSFQTSFL*LLRVLTQPWSVPDR
Trigger: CCTGTCTGGTACAGACCACGGCTGGGTAAGCACCCTTAAAAGCAACAGAAATGACGTCTGGAAGCTGAAATGTGAAACTGTCAAGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp TTCTTTCTTCATTTCTTGCAATTCTTGGAGCTTGCTGGTAAGTGTCTGAATCTCAGGTCGGCCTTCGCCTaGAGGAGCTGCTTCACCTCC +
Preference number: 2 (lower is better)
Translates to: FFLHFLQFLELAGKCLNLRSAFA*RSCFTS
Trigger: GGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCT...GAGATTCAGACACTTACCAGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR TCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCACTGGTTCCCAAGAGTaGGCACGTCCCGCAGAAACA +
Preference number: 2 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLTGSQE*ARPAET
Trigger: TGTTTCTGCGGGACGTGCTCACTCTTGGGAACCAGT...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTCCCTTCCACCTCTTCTaGCTTGTGGGGACCACCCAA +
Preference number: 2 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGPFHLF*LVGTTQ
Trigger: TTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGG...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TTCTTTCTTCATTTCTTGCAATTCTTGGAGCTTGCTGGTAAGTGTCTGAATCTCAATCCGTGCCGCGGCTaGGATCCAGGAGCTGCTCTA +
Preference number: 2 (lower is better)
Translates to: FFLHFLQFLELAGKCLNLNPCRG*DPGAAL
Trigger: TAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATT...GAGATTCAGACACTTACCAGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTCACAAGCCACTGTGTTaGGGCCATCGGCCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGHKPLC*GHRPSD
Trigger: GTCAGAAGGCCGATGGCCCCAACACAGTGGCTTGTG...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATAAGTTCAAGGTGATGTaGAGGTGTTGCAGTGACAAT +
Preference number: 2 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHKFKVM*RCCSDN
Trigger: ATTGTCACTGCAACACCTCCACATCACCTTGAACTT...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR TCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCAGAGACGGTGCAATaGCAATATCGTCGGAATCAT +
Preference number: 2 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSAETVQ*QYRRNH
Trigger: ATGATTCCGACGATATTGTCATTGCACCGTCTCTGC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTAAGTTCAAGGTGATGTaGAGGTGTTGCAGTGACAAT +
Preference number: 2 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAKFKVM*RCCSDN
Trigger: ATTGTCACTGCAACACCTCCACATCACCTTGAACTT...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTTCTTTCTCCCCATCCTaGATGAGCAGGACACGCTGG +
Preference number: 2 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGSFSPS*MSRTRW
Trigger: CCAGCGTGTCCTGCTCATCCAGGATGGGGAGAAAGA...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCAGACTTCCTGGCTTTaGGGTTCCCAGCCACAGCTT +
Preference number: 2 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGQTSWL*GSQPQL
Trigger: AAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR GCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCGGCTTGAGAATGCATTaGCATTTACCCAGCGAGCTT +
Preference number: 2 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLGLRMH*HLPSEL
Trigger: AAGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCC...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCTTATCTTTCCAGTCGTaGTTCCTATGTCCTCGGCAG +
Preference number: 2 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLLSFQS*FLCPRQ
Trigger: CTGCCGAGGACATAGGAACCACGACTGGAAAGATAA...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTTTATGTATGGAACATTaGCCTCCAAGCCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGLCMEH*PPSLRQ
Trigger: CTGCCTCAGGCTTGGAGGCCAATGTTCCATACATAA...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGTCATGGCACTGCCTaGATTCAGTTTGGTAATCGT +
Preference number: 2 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGGHGTA*IQFGNR
Trigger: ACGATTACCAAACTGAATCCAGGCAGTGCCATGACC...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 90 bp AGCCACGGGAGAGCAAACGCTGCTTCCAAAACCAAAGGAGGAATTTaGCAATCGTTTAGACGGGTTATAATAGAATCTCATTCAGATCTT +
Preference number: 2 (lower is better)
Translates to: SHGRANAASKTKGGI*QSFRRVIIESHSDL
Trigger: AAGATCTGAATGAGATTCTATTATAACCCGTCTAAACGATTGCAAAATTCCTCCTTTGGTTTTGGAAGCAGCGTTTGCTCTCCCGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CCA 90 bp TTCTGCACGTGCAATGACTTCTTTAACTCAATAATCTCGTCATACATATCTTCTAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: FCTCNDFFNSIISSYISSRAPEM*PLHSEG
Trigger: ACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCT...AGAAGATATGTATGACGAGATTATTGAGTTAAAGAAGTCATTGCACGTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTCTTCAAGATGGATGCTaGCTTTTAAAAGAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGLQDGC*LLKEQP
Trigger: GGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAG...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp GCCCAGCCCAGCCCAGCCCAGCCCAGCCATGGAGCTTaGGAGTGCAGAGGCCGCACACATGGGGTGACGGGG +
Preference number: 3 (lower is better)
Translates to: AQPSPAQPSHGA*ECRGRTHGVTG
Trigger: CCCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCTGGGCTGGGCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp CGGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCATaGAGCTTGGGAGTGCAGAGGCCGCACACATGGGGT +
Preference number: 3 (lower is better)
Translates to: RPSPAQPSPAQP*SLGVQRPHTWG
Trigger: ACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp CGCAGAGCGGACTGGATGATGACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCCTGGGCGATGGGGCTC +
Preference number: 3 (lower is better)
Translates to: RRADWMMTMASS*TGLPVAWAMGL
Trigger: GAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGTCATCATCCAGTCCGCTCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp TGCCTGGCCCGGGCCAGGTGTGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCCTCCTGCACAGGGCTG +
Preference number: 3 (lower is better)
Translates to: CLARARCARRAD*MMTMASSCTGL
Trigger: CAGCCCTGTGCAGGAGGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCCAGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp GGACCTGAAGCTTTGAGCTGGCAAGCAGGGATGGCTTaGGACAGCGCCCCAGGGAGTGGACCCGGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: GPEALSWQAGMA*DSAPGSGPGRV
Trigger: CACCCGCCCGGGTCCACTCCCTGGGGCGCTGTCCCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp CTCTCACAGCCCCTCGGAGACGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGC +
Preference number: 3 (lower is better)
Translates to: LSQPLGDARGPC*GPLVAVCAAQS
Trigger: GCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp TCCGTGCCGCGGCTGGGATCCAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTTTCCTCCTCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: SVPRLGSRSCSI*RSFLLFSSSRR
Trigger: GCGCCTGGAGGAGGAAAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp TTTACCGGTAGCACTGTGCCTGGCCCGGGCCAGGTGTaGCCGCAGAGCGGACTGGATGATGACGATGGCCTC +
Preference number: 3 (lower is better)
Translates to: FTGSTVPGPGQV*PQSGLDDDDGL
Trigger: GAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCCAGGCACAGTGCTACCGGTAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp CTGCCTTGTGGGGACCACCCAAGCCCTCTCCCGACTTaGCCAGAGGCTGCACGCCTCTCTGGCATCACAGTC +
Preference number: 3 (lower is better)
Translates to: LPCGDHPSPLPT*PEAARLSGITV
Trigger: GACTGTGATGCCAGAGAGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp CCGGGCCCTGGGTTGGAGTTTAGCCCTGCTTGGCTCTaGCCGCTAGTCTCAGTCAGGTCACTCACCCCAGGC +
Preference number: 3 (lower is better)
Translates to: PGPGLEFSPAWL*PLVSVRSLTPG
Trigger: GCCTGGGGTGAGTGACCTGACTGAGACTAGCGGGCAGAGCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp GGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTaGGTGGCCCCATCCCTGAGTGACTGGGAGAGAACA +
Preference number: 3 (lower is better)
Translates to: GFEPQGGAGPAL*VAPSLSDWERT
Trigger: TGTTCTCTCCCAGTCACTCAGGGATGGGGCCACCCAAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGGGACAGGCCGTGTTTaGCTGTGGGGATGGGGGAAG +
Preference number: 3 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSGTGRV*LWGWGK
Trigger: CTTCCCCCATCCCCACAGCAAAACACGGCCTGTCCC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 72 bp CAGCAGGCCCTTGGGAGCTTGGCGAGGTGGGAGCCTTaGGAAATAGCTGGCTCGGACCCATGGCGGGGTTTG +
Preference number: 3 (lower is better)
Translates to: QQALGSLARWEP*EIAGSDPWRGL
Trigger: CAAACCCCGCCATGGGTCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGCCAAGCTCCCAAGGGCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp GCTCCTCACGGTCAAGGTCGTGGGCAGGCGGCAAGGTaGTGTCAGAGAACGTGTCACTACAGGGCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: APHGQGRGQAAR*CQRTCHYRAPW
Trigger: CCAGGGAGCCCTGTAGTGACACGTTCTCTGACAGCACCTTGCCGCCTGCCCACGACCTTGACCGTGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp CAGACACCAGATGCAACACGCCCCACCACGAGCCTATaGTGTCCCTTGGAACGGCGAGCCTGCCTCCTCACC +
Preference number: 3 (lower is better)
Translates to: QTPDATRPTTSL*CPLERRACLLT
Trigger: GGTGAGGAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp TCGGAGACGCTCGTGGTCCTTGTTGCGGTCCCCTCGTaGCTGTCTGTGCAGCGCAGAGCTGGATGCAAGGCA +
Preference number: 3 (lower is better)
Translates to: SETLVVLVAVPS*LSVQRRAGCKA
Trigger: TGCCTTGCATCCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp TCCTTCAGGTCTCTCACAGCCCCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCTCGTGGCTGTCTGTGC +
Preference number: 3 (lower is better)
Translates to: SFRSLTAPRRRS*SLLRSPRGCLC
Trigger: GCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAGACCTGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp TGTGCTTGTACACCTTCCACTGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCCCATCAGAGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: CACTPSTGPAGL*PRRLFSHQSRG
Trigger: CCCCCTGCTCTGATGGGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp ATGCAACACGCCCCACCACGAGCCTATGCTGTCCCTTaGAACGGCGAGCCTGCCTCCTCACCCTCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: MQHAPPRAYAVP*NGEPASSPSSP
Trigger: AGGAGAGGAGGGTGAGGAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGCTCGTGGTGGGGCGTGTTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp CAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTaGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: QGPRQFQAQRTS*AKAGPCCGPSW
Trigger: CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR-3UTR CAA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCGCTCCCGCCACCAGCTaGGGAACAGACATCACCCTG +
Preference number: 3 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIAPATS*GTDITL
Trigger: CAGGGTGATGTCTGTTCCCAAGCTGGTGGCGGGAGC...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 72 bp ATGGAGCTTGGGAGTGCAGAGGCCGCACACATGGGGTaGCGGGGACTGTCCCAGACACCAGATGCAACACGC +
Preference number: 3 (lower is better)
Translates to: MELGSAEAAHMG*RGLSQTPDATR
Trigger: GCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp TCCTCCTTCAGGCTCTGGTTCTCTTCCGTGAGCTCCTaGACACTCCGGGACAAGCTCAGGAGGGCACTGCCC +
Preference number: 3 (lower is better)
Translates to: SSFRLWFSSVSS*TLRDKLRRALP
Trigger: GGGCAGTGCCCTCCTGAGCTTGTCCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp CCAACACCGGGCCCTGGGTTGGAGTTTAGCCCTGCTTaGCTCTGCCCGCTAGTCTCAGTCAGGTCACTCACC +
Preference number: 3 (lower is better)
Translates to: PTPGPGLEFSPA*LCPLVSVRSLT
Trigger: GGTGAGTGACCTGACTGAGACTAGCGGGCAGAGCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp TGCCTGGCCCGGGCCAGGTGTGCCCGCAGAGCGGACTGGATGATGACGATGGCCTCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTC +
Preference number: 3 (lower is better)
Translates to: CLARARCARRADWMMTMASEPCA*LAKSFV
Trigger: GACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGA...GGCCATCGTCATCATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR TCA 72 bp GTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTaGCGGGGACCTAAACTGGAAAGTTCTTCGTGGGCA +
Preference number: 3 (lower is better)
Translates to: VLGSAAITAWRQ*RGPKLESSSWA
Trigger: TGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR TCA 72 bp TGTTGGGGCCATCGGCCTTCTGACCGCCACAGAGAATaGCCCAGGCTCAGCTTAGGTGACTCAGAAGGCCGC +
Preference number: 3 (lower is better)
Translates to: CWGHRPSDRHRE*PRLSLGDSEGR
Trigger: GCGGCCTTCTGAGTCACCTAAGCTGAGCCTGGGTCATTCTCTGTGGCGGTCAGAAGGCCGATGGCCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp TGGGATCCAGGAGCTGCTCTATCTGCCGGTCCTTCCTaGTGTTTTCCTCCTCCAGGCGCCGGAGCTTCGTTC +
Preference number: 3 (lower is better)
Translates to: WDPGAALSAGPS*CFPPPGAGASF
Trigger: GAACGAAGCTCCGGCGCCTGGAGGAGGAAAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp GGTCTTGGTGGTCTTCTCTGGCCCTTCCACCTCTTCTaGCTTGTGGGGACCACCCAAGCCCTCTCCCGACTT +
Preference number: 3 (lower is better)
Translates to: GLGGLLWPFHLF*LVGTTQALSRL
Trigger: AAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp CTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTCGTaGGCAGGCGGCAAGGTGCTGTCAGAGAACGTGTCA +
Preference number: 3 (lower is better)
Translates to: LVADSSSSRSRS*AGGKVLSENVS
Trigger: TGACACGTTCTCTGACAGCACCTTGCCGCCTGCCCACGACCTTGACCGTGAGGAGCTGCTATCCGCAACCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp GCTCCTCACTGGCTTGGGACAGGCCGTGTTTTGCTGTaGGGATGGGGGAAGCCGGTCTCACACCTTCCTAAG +
Preference number: 3 (lower is better)
Translates to: APHWLGTGRVLL*GWGKPVSHLPK
Trigger: CTTAGGAAGGTGTGAGACCGGCTTCCCCCATCCCCACAGCAAAACACGGCCTGTCCCAAGCCAGTGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp TCAGTCAGGTCACTCACCCCAGGCCTGCGGGAACGGTaGTCTTGGTGGTCTTCTCTGGCCCTTCCACCTCTT +
Preference number: 3 (lower is better)
Translates to: SVRSLTPGLRER*SWWSSLALPPL
Trigger: AAGAGGTGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTGACCTGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp GCTCGTGGTCCTTGTTGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGCTGGCGCATCTCTTCCAGGTaGGTAGTCTTCATATCGGTC +
Preference number: 3 (lower is better)
Translates to: ARGPCCGPLVAVCAAQSWRISSR*VVFISV
Trigger: GACCGATATGAAGACTACCAACCTGGAAGAGATGCG...CCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CAA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATGCCCAGCCATGGAGCTaGGGAGTGCAGAGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNAQPWS*GVQRPH
Trigger: GTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGC...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp CGAACAAAATCCGTGCCGCGGCTGGGATCCAGGAGCTaGTCTATCTGCCGGTCCTTCCTGCTGTTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: RTKSVPRLGSRS*SICRSFLLFSS
Trigger: GGAGGAAAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATTTTGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp CCCGTTAATGACCCAACTGGCATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATCCGTGCCGCGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PVNDPTGIGPFL*QSPNKIRAAAG
Trigger: CCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGATGCCAGTTGGGTCATTAACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp TCTCCAGCTCCACAATGCGCCTCAGCAGCCGGGGCTTaGTCCACTCCACATAACCCTGTGTCTTGGAGATGG +
Preference number: 3 (lower is better)
Translates to: SPAPQCASAAGA*STPHNPVSWRW
Trigger: CCATCTCCAAGACACAGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp CTTCAGCCTCAGCAGTGTCAGCTCAACAGACGTGACTaGTGTCAACACAGTGGGGCCAGGCCCTGGAGACTG +
Preference number: 3 (lower is better)
Translates to: LQPQQCQLNRRD*CQHSGARPWRL
Trigger: CAGTCTCCAGGGCCTGGCCCCACTGTGTTGACAGCAGTCACGTCTGTTGAGCTGACACTGCTGAGGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp GCTCCACTCCACATAACCCTGTGTCTTGGAGATGGTTaGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTT +
Preference number: 3 (lower is better)
Translates to: APLHITLCLGDG*GGAQHAVQVLL
Trigger: AAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCTCCAAGACACAGGGTTATGTGGAGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp TCACACCTTCCTAAGGCACAGCGGGGTGTGTCTGCCTaGCCTGCTGGGCTGAGATCGAGCAAATCCTGGTTG +
Preference number: 3 (lower is better)
Translates to: SHLPKAQRGVSA*PAGLRSSKSWL
Trigger: CAACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACACACCCCGCTGTGCCTTAGGAAGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp CTTTGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTaGGGACTCACTCTCTACTTCGTCTCCCCCGGGAGT +
Preference number: 3 (lower is better)
Translates to: LWHLTLGQESLS*GLTLYFVSPGS
Trigger: ACTCCCGGGGGAGACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp TGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTaGAGCCCTCCAGCTGGTGCCTCTGCTGAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: CQESLLYLQGCP*SPPAGASAEVC
Trigger: ACAGACCTCAGCAGAGGCACCAGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp TGGGAGCTTGGCGAGGTGGGAGCCTTGAGAAATAGCTaGCTCGGACCCATGGCGGGGTTTGTGTGTCAACTC +
Preference number: 3 (lower is better)
Translates to: WELGEVGALRNS*LGPMAGFVCQL
Trigger: GAGTTGACACACAAACCCCGCCATGGGTCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGCCAAGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATGCTCCCGCCACCAGCTaGGGAACAGACATCACCCTG +
Preference number: 3 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNAPATS*GTDITL
Trigger: CAGGGTGATGTCTGTTCCCAAGCTGGTGGCGGGAGC...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 72 bp CTTTCACAAGCCACTGTGTTGGGGCCATCGGCCTTCTaGCCGCCACAGAGAATGACCCAGGCTCAGCTTAGG +
Preference number: 3 (lower is better)
Translates to: LSQATVLGPSAF*PPQRMTQAQLR
Trigger: CCTAAGCTGAGCCTGGGTCATTCTCTGTGGCGGTCAGAAGGCCGATGGCCCCAACACAGTGGCTTGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp TGCCACAAGAGAACGGAGGGTCTCCCCCAGCGAATGTaGAGGTGTCTCACTTTCTCAGGGCTTTCGAGGTGG +
Preference number: 3 (lower is better)
Translates to: CHKRTEGLPQRM*RCLTFSGLSRW
Trigger: CCACCTCGAAAGCCCTGAGAAAGTGAGACACCTGCACATTCGCTGGGGGAGACCCTCCGTTCTCTTGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCCGGCAGATGTGTCTGTaGGCACTGAAAATCCACCAT +
Preference number: 3 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIRQMCL*ALKIHH
Trigger: ATGGTGGATTTTCAGTGCCAACAGACACATCTGCCG...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATCGTCTCCCCCGGGAGTaGTCTACTTTCCTAGGCCCT +
Preference number: 3 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNRLPRE*STFLGP
Trigger: AGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACG...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 72 bp TACACCGTGAACAACACCTGCCACCAACGTCGACCCTaGAGTGGTAGATGGGGCCTGCTTTGGCACTTGACG +
Preference number: 3 (lower is better)
Translates to: YTVNNTCHQRRP*SGRWGLLWHLT
Trigger: CGTCAAGTGCCAAAGCAGGCCCCATCTACCACTTCAGGGTCGACGTTGGTGGCAGGTGTTGTTCACGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp TGGAGTTTGCTGATGGTGCCGTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATCCTCTGCTTCAGCCCG +
Preference number: 3 (lower is better)
Translates to: WSLLMVPSFSLH*CSSFRILCFSP
Trigger: CGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCACCATCAGCAAACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp CCGCAGAAACAGCTTGGTTTAACAAGTGGGAGCAGCTaGCACAAGAGAACGGAGGGTCTCCCCCAGCGAATG +
Preference number: 3 (lower is better)
Translates to: PQKQLGLTSGSS*HKRTEGLPQRM
Trigger: CATTCGCTGGGGGAGACCCTCCGTTCTCTTGTGGCAGCTGCTCCCACTTGTTAAACCAAGCTGTTTCTGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp TCCGCTTGGTACTGTCTCCATGGAACAAAACCACACTaGAGCGTTCCAGGACCACAGAACAGCCAGGCAGGC +
Preference number: 3 (lower is better)
Translates to: SAWYCLHGTKPH*SVPGPQNSQAG
Trigger: GCCTGCCTGGCTGTTCTGTGGTCCTGGAACGCTGCAGTGTGGTTTTGTTCCATGGAGACAGTACCAAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp AGGGACATGACCGTTGCTGGCAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGTGTCTGTCAGACAGTC +
Preference number: 3 (lower is better)
Translates to: RDMTVAGRAPEM*PLHSEGVCQTV
Trigger: GACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCTGCCAGCAACGGTCATGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp CCATCACGGCGTGGAGACAGTGACGGGGACCTAAACTaGAAAGTTCTTCGTGGGCAGAGACGGTGCAATGAC +
Preference number: 3 (lower is better)
Translates to: PSRRGDSDGDLN*KVLRGQRRCND
Trigger: GTCATTGCACCGTCTCTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CCA 72 bp AGGTGCTGTCAGAGAACGTGTCACTACAGGGCTCCCTaGCATCTGCGAGTTCACGGCAGATGTGTCTGTTGG +
Preference number: 3 (lower is better)
Translates to: RCCQRTCHYRAP*HLRVHGRCVCW
Trigger: CCAACAGACACATCTGCCGTGAACTCGCAGATGCCAGGGAGCCCTGTAGTGACACGTTCTCTGACAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGGCGGGTCCTGCACTTaGGGTGGCCCCATCCCTGAG +
Preference number: 3 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSGGSCT*GGPIPE
Trigger: CTCAGGGATGGGGCCACCCAAAGTGCAGGACCCGCC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp TTCTCCTTGCACTGCTGTTCCAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACCCAACTGGCATCGGGC +
Preference number: 3 (lower is better)
Translates to: FSLHCCSSFRIL*FSPLMTQLASG
Trigger: GCCCGATGCCAGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGCAAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp GTCAGAGAACGTGTCACTACAGGGCTCCCTGGCATCTaGGAGTTCACGGCAGATGTGTCTGTTGGCACTGAA +
Preference number: 3 (lower is better)
Translates to: VRERVTTGLPGI*EFTADVSVGTE
Trigger: TTCAGTGCCAACAGACACATCTGCCGTGAACTCGCAGATGCCAGGGAGCCCTGTAGTGACACGTTCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp CAGGTGTCTCACTTTCTCAGGGCTTTCGAGGTGGACTaGCTCCTAGGACCTGAAGCTTTGAGCTGGCAAGCA +
Preference number: 3 (lower is better)
Translates to: QVSHFLRAFEVD*LLGPEALSWQA
Trigger: TGCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGCCCTGAGAAAGTGAGACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp ACCCAGCAAAGGGGACTGGTGACCAGCACTGGACACTaGGCATCAGCTGAAGACACTGGCTTGAGAATGCAT +
Preference number: 3 (lower is better)
Translates to: TQQRGLVTSTGH*ASAEDTGLRMH
Trigger: ATGCATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGTCCAGTGCTGGTCACCAGTCCCCTTTGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp AGACGTGACTGCTGTCAACACAGTGGGGCCAGGCCCTaGAGACTGACATCTCCTGTGGCTGCTTGTTTAAAG +
Preference number: 3 (lower is better)
Translates to: RRDCCQHSGARP*RLTSPVAACLK
Trigger: CTTTAAACAAGCAGCCACAGGAGATGTCAGTCTCCAGGGCCTGGCCCCACTGTGTTGACAGCAGTCACGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCTGGCTTGAGAATGCATaGCCATTTACCCAGCGAGCT +
Preference number: 3 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFWLENA*PFTQRA
Trigger: AGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCCA...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 72 bp GGGACTGGTGACCAGCACTGGACACTGGGCATCAGCTaGAGACACTGGCTTGAGAATGCATTGCCATTTACC +
Preference number: 3 (lower is better)
Translates to: GTGDQHWTLGIS*RHWLENALPFT
Trigger: GGTAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGTCCAGTGCTGGTCACCAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp TGGGGCCAGGCCCTGGAGACTGACATCTCCTGTGGCTaGTTGTTTAAAGGGCATGGGATAGAGAAAGAGTGT +
Preference number: 3 (lower is better)
Translates to: WGQALETDISCG*LFKGHGIEKEC
Trigger: ACACTCTTTCTCTATCCCATGCCCTTTAAACAAGCAGCCACAGGAGATGTCAGTCTCCAGGGCCTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATCGGCAGATGTGTCTGTaGGCACTGAAAATCCACCAT +
Preference number: 3 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNRQMCL*ALKIHH
Trigger: ATGGTGGATTTTCAGTGCCAACAGACACATCTGCCG...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTCTAGGACCTGAAGCTTaGAGCTGGCAAGCAGGGATG +
Preference number: 3 (lower is better)
Translates to: NAAKLCCAYLGGSELGWALGPEA*SWQAGM
Trigger: CATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAG...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGCAGGAGTCCCTTTCTaGGGGACTCACTCTCTACTT +
Preference number: 3 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHAGVPF*GTHSLL
Trigger: AAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATAGCAAATCCTGGTTGTaGAGGGTGTCACCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHSKSWL*RVSPGR
Trigger: TCTTCCTGGTGACACCCTCAACAACCAGGATTTGCT...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp GCTTTTAAAAGAGCAGCCCAGCTGCACCAGAGGACATaGCGGTTTATGTATGGAACATTGGCCTCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: AFKRAAQLHQRT*RFMYGTLASKP
Trigger: AGGCTTGGAGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp CATTGCCATTTACCCAGCGAGCTTCAAGATGGATGCTaGCTTTTAAAAGAGCAGCCCAGCTGCACCAGAGGA +
Preference number: 3 (lower is better)
Translates to: HCHLPSELQDGC*LLKEQPSCTRG
Trigger: TCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTGGGTAAATGGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp ATGCATTGCCATTTACCCAGCGAGCTTCAAGATGGATaGTGGCTTTTAAAAGAGCAGCCCAGCTGCACCAGA +
Preference number: 3 (lower is better)
Translates to: MHCHLPSELQDG*WLLKEQPSCTR
Trigger: TCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTGGGTAAATGGCAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CCA 72 bp GAGAATGCATTGCCATTTACCCAGCGAGCTTCAAGATaGATGCTGGCTTTTAAAAGAGCAGCCCAGCTGCAC +
Preference number: 3 (lower is better)
Translates to: ENALPFTQRASR*MLAFKRAAQLH
Trigger: GTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTGGGTAAATGGCAATGCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTGCTTTGCTGCTGTTCTaGAAGTTCAAGGTGATGTGG +
Preference number: 3 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAALLLF*KFKVMW
Trigger: CCACATCACCTTGAACTTCAAGAACAGCAGCAAAGC...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR TCA 72 bp GTTCTTGAAGTTCAAGGTGATGTGGAGGTGTTGCAGTaGCAATCAGTACACCGTGAACAACACCTGCCACCA +
Preference number: 3 (lower is better)
Translates to: VLEVQGDVEVLQ*QSVHREQHLPP
Trigger: TGGTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCACCTTGAACTTCAAGAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp CGGAGCTTCGTTCTCATCAGGTCCACGTCGCTCTTCTaGACGTGCAATGACTTCTTTAACTCAATAATCTCG +
Preference number: 3 (lower is better)
Translates to: RSFVLIRSTSLF*TCNDFFNSIIS
Trigger: CGAGATTATTGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGACGTGGACCTGATGAGAACGAAGCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp GACCTAAACTGGAAAGTTCTTCGTGGGCAGAGACGGTaGAATGACAATATCGTCGGAATCATCGGAGTTGAC +
Preference number: 3 (lower is better)
Translates to: DLNWKVLRGQRR*NDNIVGIIGVD
Trigger: GTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAAGAACTTTCCAGTTTAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR GCA 72 bp CAAGATGGATGCTGGCTTTTAAAAGAGCAGCCCAGCTaGACCAGAGGACATGGCGGTTTATGTATGGAACAT +
Preference number: 3 (lower is better)
Translates to: QDGCWLLKEQPS*TRGHGGLCMEH
Trigger: ATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTTTAAAAGCCAGCATCCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCCTAGGACCTGAAGCTTaGAGCTGGCAAGCAGGGATG +
Preference number: 3 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLLGPEA*SWQAGM
Trigger: CATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAG...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTAGGAGGCCTCTCCGCTaGGTACTGTCTCCATGGAAC +
Preference number: 3 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGRRPLR*VLSPWN
Trigger: GTTCCATGGAGACAGTACCAAGCGGAGAGGCCTCCT...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCAGACTTCCTGGCTTaGCGGTTCCCAGCCACAGCT +
Preference number: 3 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSDFLA*RFPATA
Trigger: AGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR-3UTR CAA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCTCGAGCAAATCCTGGTaGTTGAGGGTGTCACCAGGA +
Preference number: 3 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLSSKSW*LRVSPG
Trigger: TCCTGGTGACACCCTCAACAACCAGGATTTGCTCGA...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp ATAACACGGTTTTACTCAACAAACAAACAGGAGAAATaGTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTT +
Preference number: 3 (lower is better)
Translates to: ITRFYSTNKQEK*WPEGGSHLGPV
Trigger: AACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTTGTTTGTTGAGTAAAACCGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR TCA 72 bp ATTTCTTGCAATTCTTGGAGCTTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACCTCCTCTCGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: ISCNSWSLLVSV*ISSLKTSSRSL
Trigger: GAGAGAGCGAGAGGAGGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAAGCTCCAAGAATTGCAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR TCA 72 bp TGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTaGGCTAGGTTGGGCTATCTTTTCCTAATTCAATTG +
Preference number: 3 (lower is better)
Translates to: CSQALLCLSWWI*ARLGYLFLIQL
Trigger: CAATTGAATTAGGAAAAGATAGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR-3UTR CAA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCGCTGAAGACACTGGCTaGAGAATGCATTGCCATTTA +
Preference number: 3 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLAEDTG*RMHCHL
Trigger: TAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAGC...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp AATCTCATTCAGATCTTGAAGGTTATCGGTGCTTTCTaGAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTT +
Preference number: 3 (lower is better)
Translates to: NLIQILKVIGAF*RFLFLKNAAKL
Trigger: AAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCAGAAAGCACCGATAACCTTCAAGATCTGAATGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR GCA 72 bp ATAATAGAATCTCATTCAGATCTTGAAGGTTATCGGTaGTTTCTGCAGGTTTTTATTCCTCAAAAATGCAGC +
Preference number: 3 (lower is better)
Translates to: IIESHSDLEGYR*FLQVFIPQKCS
Trigger: GCTGCATTTTTGAGGAATAAAAACCTGCAGAAAGCACCGATAACCTTCAAGATCTGAATGAGATTCTATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACAGGAGAGCTCTGGTTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CPWPGRWGSERGAQESSGCPGTW*RRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCA...ACCAGAGCTCTCCTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 72 bp AGCCCAGCCCAGCCCAGCCCAGCCCAGCCATGGAGCTaGGGAGTGCAGAGGCCGCACACATGGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: SPAQPSPAQPWS*GVQRPHTWGDG
Trigger: CCCGTCACCCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCTGGGCTGGGCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCCTGCACAGGGCTGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACACAGAGGCATGCTCCCTaGCGTCCTGAGGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SCTGLPVAWAMGLGTRGTQRHAP*RPEGPP
Trigger: TGGAGGTCCCTCAGGACGGCAGGGAGCATGCCTCTG...TGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAGGGCTGCCCGTGGCCTaGGCGATGGGGCTCGGAACG +
Preference number: 4 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRGLPVA*AMGLGT
Trigger: CGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCC...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTGCACAGGGCTGCCCGTaGCCTGGGCGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFAQGCP*PGRWGS
Trigger: CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGC...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGTCGGGCGTCCGGGTCTaGGAATCCGCGGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLSGVRV*ESAGSP
Trigger: AGGGCTGCCCGCGGATTCCCAGACCCGGACGCCCGA...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476665.5
CDS-3UTR CCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPCPGTW*RRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCA...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACAGGAGAGCTCTGGTGTTGCGGTCCCCTCGTaGCTGTCTGTGCAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: CPWPGRWGSERGAQESSGVAVPS*LSVQRR
Trigger: TCTGCGCTGCACAGACAGCCACGAGGGGACCGCAAC...ACCAGAGCTCTCCTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp GGCCTCTTCACTCTGAAGGTGTCTGTCAGACAGTCAGGAGTGCCGCCGGGGACGGCCGCCCCTCAGGGTTaGTGGCTCGGGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLFTLKVSVRQSGVPPGTAAPQG*WLGRPG
Trigger: ACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGC...CGTCCCCGGCGGCACTCCTGACTGTCTGACAGACACCTTCAGAGTGAAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGCCGCCCCTCAGGGTTaGTGGCTCGGGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDAAPQG*WLGRPG
Trigger: ACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGCCGCCCCTCAGGGTTaGTGGCTCGGGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVAAPQG*WLGRPG
Trigger: ACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWARPAPR*PGTWWR
Trigger: CCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCT...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGRPAPR*PGTWWR
Trigger: CCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATTMASS*TGLPVA
Trigger: GGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGT...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTCCGGCGCTGGCTTCGTaGCCCAGGCACACCCACCTC +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGPALAS*PRHTHL
Trigger: GAGGTGGGTGTGCCTGGGGCACGAAGCCAGCGCCGG...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHCPGTW*RRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCA...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFCPGTW*RRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCA...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWCPGTW*RRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCA...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFRCPGT*WRRCPA
Trigger: GGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCG...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDRCPGT*WRRCPA
Trigger: GGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGCCGTGGCCTGGGCGATaGGGCTCGGAACGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWPWPGR*GSERGA
Trigger: TGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGG...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCTGCCCGTGGCCTaGGCGATGGGGCTCGGAACG +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTGLPVA*AMGLGT
Trigger: CGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCC...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCGGGCTGCCCGTGGCCTaGGCGATGGGGCTCGGAACG +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFGLPVA*AMGLGT
Trigger: CGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCC...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGATGGTTGGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTTCAGGCTCTGGTGCACAGGGCTGCCCGTaGCCTGGGCGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RWLGRCSARGPGPPSGSGAQGCP*PGRWGS
Trigger: CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGC...ACCAGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGCACAGGGCTGCCCGTaGCCTGGGCGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDAQGCP*PGRWGS
Trigger: CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCGCACAGGGCTGCCCGTaGCCTGGGCGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFAQGCP*PGRWGS
Trigger: CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGC...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACCAGGCCCTGGGGCCGTaGGCAAGGAGGCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHQALGP*ARRPLR
Trigger: GCGGAGAGGCCTCCTTGCCCACGGCCCCAGGGCCTG...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGTGCTCCCTGCCGTCCTaGGGGACCTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGCSLPS*GTSRRP
Trigger: TGGCCTCCTGGAGGTCCCTCAGGACGGCAGGGAGCA...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYRPAPR*PGTWWR
Trigger: CCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCT...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCAGCGCAGAGCTGGATaGAAGGCAGGCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWQRRAG*KAGWRV
Trigger: CACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTG...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGTGCAGCAGCTGCTCCTaGAGCGCGGTCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLCSSCS*SAVRSS
Trigger: GGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCA...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGTCTCTCTGCAGCAGCTaGTCCTGCAGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWSLCSS*SCSAVR
Trigger: GCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGA...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGTCCGGCGGCCAGTCTTaGTCGCAGTGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLSGGQS*SQCLLL
Trigger: CAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGA...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGTFHWA*RTLAAA
Trigger: CGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGT...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGTMASS*TGLPVA
Trigger: GGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGGCCCGGGCCAGGTGTaGCCGCAGAGCGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKGPGQV*PQSGLD
Trigger: ATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCC...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCCGGCGCTGGCTTCGTaGCCCAGGCACACCCACCTC +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDPALAS*PRHTHL
Trigger: GAGGTGGGTGTGCCTGGGGCACGAAGCCAGCGCCGG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GGCCTCTTCACTCTGAAGGTGTCTGTCAGACAGTCAGGAGTGCCGCCGGGGACGTCGGGCGTCCGGGTCTaGGAATCCGCGGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLFTLKVSVRQSGVPPGTSGVRV*ESAGSP
Trigger: AGGGCTGCCCGCGGATTCCCAGACCCGGACGCCCGA...CGTCCCCGGCGGCACTCCTGACTGTCTGACAGACACCTTCAGAGTGAAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp TCGGGCCTTTTCTCTGCCAGAGTCCGAACAAAATCCGTGCCGCGGCTGGGATCCCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SGLFSARVRTKSVPRLGSRCPGT*WRRCPA
Trigger: GGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCG...GGATCCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIRCPGT*WRRCPA
Trigger: GGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCG...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTCGTGGTCCTTGTTGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGCTGGGGAGCCCCTCCTCGCTaGAATCCGGCGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ARGPCCGPLVAVCAAQSWGAPPR*NPAASL
Trigger: AAGACTGGCCGCCGGATTCCAGCGAGGAGGGGCTCC...CCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp AGCGCAGAGCTGGATGCAAGGCAGGCTGGCGGGTGTGATCTGACTGGCTCTGCGGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAELDARQAGGCDLTGSAGPAGL*PRRLFS
Trigger: GGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCC...CGCAGAGCCAGTCAGATCACACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGGGCACAGGAGAGCTCTaGTCTGGGAGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATGTGEL*SGRPGT
Trigger: CGTGCCAGGCCTCCCAGACCAGAGCTCTCCTGTGCC...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TTCTTCTCCAGCTCCACAATGCGCCTCAGCAGCCGGGGCTTGCTCCACTCCACACCGTGGCCTGGGCGATaGGGCTCGGAACGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: FFSSSTMRLSSRGLLHSTPWPGR*GSERGA
Trigger: TGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGG...TGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCCGTGGCCTGGGCGATaGGGCTCGGAACGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEPWPGR*GSERGA
Trigger: TGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACCGTGGCCTGGGCGATaGGGCTCGGAACGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRPWPGR*GSERGA
Trigger: TGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGG...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCGGGCTGCCCGTGGCCTaGGCGATGGGGCTCGGAACG +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIGLPVA*AMGLGT
Trigger: CGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCC...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGACCTGCGTTCCCCCTaGGGCGACCATGCGCGTGCG +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHDLRSP*GDHARA
Trigger: CGCACGCGCATGGTCGCCCCAGGGGGAACGCAGGTC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGACCTGCGTTCCCCCTaGGGCGACCATGCGCGTGCG +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYDLRSP*GDHARA
Trigger: CGCACGCGCATGGTCGCCCCAGGGGGAACGCAGGTC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGCGACCCCGCTGCCATaGCAACCAGGCCGCCGACCT +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVATPLP*QPGRRP
Trigger: AGGTCGGCGGCCTGGTTGCCATGGCAGCGGGGTCGC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGGCCTCTGCAGCTGCTaGCTCCACAGGCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSGLCSC*LHRLRT
Trigger: CGTGCGGAGCCTGTGGAGCCAGCAGCTGCAGAGGCC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGTGCTCCCTGCCGTCCTaGGGGACCTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWCSLPS*GTSRRP
Trigger: TGGCCTCCTGGAGGTCCCTCAGGACGGCAGGGAGCA...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATTGCTCCCTGCCGTCCTaGGGGACCTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYCSLPS*GTSRRP
Trigger: TGGCCTCCTGGAGGTCCCTCAGGACGGCAGGGAGCA...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGGCAGGCTGGCGGGTGTaGTCTGACTGGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGAGWRV*SDWLCG
Trigger: GCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGC...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGCCCCTGAAAGCTGCCTaGAGCACCACAGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATPLKAA*STTAAS
Trigger: TGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGG...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAGTCCCCGTGTGTGGCTaGAGCCGATCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRVPVCG*SRSPPG
Trigger: ACCAGGAGGAGATCGGCTTCAGCCACACACGGGGAC...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCGGGAAAGGACGGTGTaGGCGGGTGGGGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGRERTV*AGGAWS
Trigger: ACTCCATGCCCCACCCGCTCACACCGTCCTTTCCCG...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGGCCGCACACATGGGGTaGCGGGGACTGTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGAAHMG*RGLSQT
Trigger: TGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGC...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CTTAGTTTCTTCTCCAGCTCCACAATGCGCCTCAGCAGCCGGGGCTTGCTCCACACATGGTGGCGGCGCTaGCCGGCCGCCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSFFSSSTMRLSSRGLLHTWWRR*PAAPQG
Trigger: ACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGT...GTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGAAGAAACTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTCAGAGGCATGCTCCCTaGCGTCCTGAGGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFQRHAP*RPEGPP
Trigger: TGGAGGTCCCTCAGGACGGCAGGGAGCATGCCTCTG...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFPSHSF*GVRDAR
Trigger: CCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGG...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFTPVHA*SQVRGE
Trigger: CTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGT...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCTCAGACAGTCAGGAGTaGCGCCGGGGACGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGSDSQE*RRGRQS
Trigger: GGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGA...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGTCTCCAGCTCCACAATaGGCCTCAGCAGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWSPAPQ*ASAAGA
Trigger: AGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTGCAGCAGCTGCTCCTaGAGCGCGGTCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWACSSCS*SAVRSS
Trigger: GGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCA...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGAGGTCGGCCTTCGCCTaGAGGAGCTGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLRSAFA*RSCFTS
Trigger: GGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCT...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTTFHWA*RTLAAA
Trigger: CGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGT...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDTFHWA*RTLAAA
Trigger: CGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGT...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTTTACCGGTAGCACTGTaGCTGGCCCGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFLPVAL*LARARC
Trigger: ACACCTGGCCCGGGCCAGGCACAGTGCTACCGGTAA...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACAGGAGAGCTCTGGTTCCTCCTTCAGGCTCTaGTTCTCTTCCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CPWPGRWGSERGAQESSGSSFRL*FSSVSS
Trigger: GGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGA...ACCAGAGCTCTCCTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTGGAGCCCCTCCTCGCTaGAATCCGGCGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGGAPPR*NPAASL
Trigger: AAGACTGGCCGCCGGATTCCAGCGAGGAGGGGCTCC...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFGPAGL*PRRLFS
Trigger: GGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCC...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDGPAGL*PRRLFS
Trigger: GGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGGGAGGCCTGGCACGCTaGGTGGCTCTGAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGGGLAR*VALSHV
Trigger: CACATGGCTCAGAGCCACCCAGCGTGCCAGGCCTCC...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGCCGTGGCCTGGGCGATaGGGCTCGGAACGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: QEKCWPEGGSHLGPVGAEPWPGR*GSERGA
Trigger: TGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGG...CTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGCACAGGGCTGCCCGTaGCCTGGGCGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKAAQGCP*PGRWGS
Trigger: CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGC...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAAGGCGTCCCCGTGTGTaGCTGAAGCCGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRRRPRV*LKPISS
Trigger: GGAGGAGATCGGCTTCAGCCACACACGGGGACGCCT...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGCGACCCCGCTGCCATaGCAACCAGGCCGCCGACCT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEATPLP*QPGRRP
Trigger: AGGTCGGCGGCCTGGTTGCCATGGCAGCGGGGTCGC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGCAGGAAGAGGGGGCATaGTGTCGGCGCTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGQEEGA*CRRWLR
Trigger: CCGCAACCAGCGCCGACACCATGCCCCCTCTTCCTG...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGGCACAAAGGACAAGCTaGGCCAAGGCGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWAQRTS*AKAGPC
Trigger: ACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGC...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR CAA 72 bp TCTCTCACAGCCCCTCGGAGACGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLTAPRRRSWSL*RSPRGCLCSAE
Trigger: CTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 72 bp AGGTCTCTCACAGCCCCTCGGAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RSLTAPRRRSWS*LRSPRGCLCSA
Trigger: TGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGTGAGAGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 72 bp GATGCAACACGCCCCACCACGAGCCTATGCTGTCCCTaGGAACGGCGAGCCTGCCTCCTCACCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DATRPTTSLCCP*ERRACLLTLLS
Trigger: GGAGAGGAGGGTGAGGAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGCTCGTGGTGGGGCGTGTTGCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACAGGAGAGCTCTGGTGTGGCCTCTTCACTCTaGAGGTGTCTGTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: CPWPGRWGSERGAQESSGVASSL*RCLSDS
Trigger: ACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCAC...ACCAGAGCTCTCCTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR TCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTTCTGGTTCTCTTCCGTaGGCTCCTGGACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFSGSLP*APGHSG
Trigger: CCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGA...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGCTGGCGGGTGTGATCTaGCTGGCTCTGCGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWLAGVI*LALRRV
Trigger: CACACGCCGCAGAGCCAGTCAGATCACACCCGCCAG...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGCAGGCTGGCGGGTGTaGTCTGACTGGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRAGWRV*SDWLCG
Trigger: GCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGC...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCCCCCTGAAAGCTGCCTaGAGCACCACAGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWAPLKAA*STTAAS
Trigger: TGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGG...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGCACGCTGGGTGGCTCTaGGCCATGTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATHAGWL*AMCFAC
Trigger: GCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTG...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGTCCCCGTGTGTGGCTaGAGCCGATCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGVPVCG*SRSPPG
Trigger: ACCAGGAGGAGATCGGCTTCAGCCACACACGGGGAC...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGGGAGAAATGCTGGCCTaGAGGAGGAAGCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATGEMLA*RRKPPR
Trigger: CCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCC...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCCGCCCCTCAGGGTTaGTGGCTCGGGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRAAPQG*WLGRPG
Trigger: ACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGC...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476665.5
CDS-3UTR GCA 90 bp TCGGGCCTTTTCTCTGCCAGAGTCCGAACAAAATCCGTGCCGCGGCTGGGATCCCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: SGLFSARVRTKSVPRLGSPSHSF*GVRDAR
Trigger: CCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGG...GGATCCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGTPVHA*SQVRGE
Trigger: CTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGATGGTTGGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTTCAGGCTCTGGTCAGCGCAGAGCTGGATaGAAGGCAGGCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RWLGRCSARGPGPPSGSGQRRAG*KAGWRV
Trigger: CACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTG...ACCAGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAGGTCGGCCTTCGCCTaGAGGAGCTGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGRSAFA*RSCFTS
Trigger: GGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TGGAGATGGTTGGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTTCAGGCTCTTCCGGCGGCCAGTCTTaGTCGCAGTGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WRWLGRCSARGPGPPSGSSGGQS*SQCLLL
Trigger: CAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGA...AGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp AGCGCAGAGCTGGATGCAAGGCAGGCTGGCGGGTGTGATCTGACTGGCTCTGCGTGTCCTCGGCAGCGCTaGCATCACGGCGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SAELDARQAGGCDLTGSACPRQR*HHGVET
Trigger: TGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACA...CGCAGAGCCAGTCAGATCACACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCTTGGAACGGCGAGCCTaGCTCCTCACCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSLERRA*LLTLLS
Trigger: GGAGAGGAGGGTGAGGAGGCAGGCTCGCCGTTCCAA...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGGGTGGGGCGGGTCCTaGACTTTGGGTGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRGWGGS*TLGGPI
Trigger: GATGGGGCCACCCAAAGTGCAGGACCCGCCCCACCC...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTAGCCCTGCTTGGCTCTaGCCGCTAGTCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFSPAWL*PLVSVR
Trigger: CCTGACTGAGACTAGCGGGCAGAGCCAAGCAGGGCT...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACTCGGGCGTCCGGGTCTaGGAATCCGCGGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHSGVRV*ESAGSP
Trigger: AGGGCTGCCCGCGGATTCCCAGACCCGGACGCCCGA...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTTGTGCAGCGCAGAGCTaGATGCAAGGCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPCAAQS*MQGRLA
Trigger: CGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACA...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTGTGCAGCGCAGAGCTaGATGCAAGGCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWACAAQS*MQGRLA
Trigger: CGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACA...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGPRRRS*SLLRSP
Trigger: AGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGG...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAGCCCCTCCTCGCTaGAATCCGGCGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTGAPPR*NPAASL
Trigger: AAGACTGGCCGCCGGATTCCAGCGAGGAGGGGCTCC...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGAGCCCCTCCTCGCTaGAATCCGGCGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDGAPPR*NPAASL
Trigger: AAGACTGGCCGCCGGATTCCAGCGAGGAGGGGCTCC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGGAGCCCCTCCTCGCTaGAATCCGGCGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKGAPPR*NPAASL
Trigger: AAGACTGGCCGCCGGATTCCAGCGAGGAGGGGCTCC...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGGAGGCCTGGCACGCTaGGTGGCTCTGAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWGGLAR*VALSHV
Trigger: CACATGGCTCAGAGCCACCCAGCGTGCCAGGCCTCC...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGGCACAGGAGAGCTCTaGTCTGGGAGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVGTGEL*SGRPGT
Trigger: CGTGCCAGGCCTCCCAGACCAGAGCTCTCCTGTGCC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAGGCGTCCCCGTGTGTaGCTGAAGCCGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGRRPRV*LKPISS
Trigger: GGAGGAGATCGGCTTCAGCCACACACGGGGACGCCT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCAGGCGTCCCCGTGTGTaGCTGAAGCCGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGRRPRV*LKPISS
Trigger: GGAGGAGATCGGCTTCAGCCACACACGGGGACGCCT...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCGGGGTGTGTCTGCCTaGCCTGCTGGGCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDRGVSA*PAGLRS
Trigger: CGATCTCAGCCCAGCAGGCCAGGCAGACACACCCCG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATCAGAGGCCGCACACATaGGGTGACGGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYQRPHT*GDGDCP
Trigger: GGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTGCGGGTCCTGCACTTTaGGTGGCCCCATCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGAGPAL*VAPSLS
Trigger: ACTCAGGGATGGGGCCACCCAAAGTGCAGGACCCGC...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTCTTCGAACCGCAGGGTaGGGCGGGTCCTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPLRTAG*GGSCTL
Trigger: CAAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAG...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGTGGACCCGGGCGGGTaGGGTGAAGGCAGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRVDPGG*GEGRGL
Trigger: TAGACCCCTGCCTTCACCCCACCCGCCCGGGTCCAC...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGCAGGCCCTGGGGCCGTaGGCAAGGAGGCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVQALGP*ARRPLR
Trigger: GCGGAGAGGCCTCCTTGCCCACGGCCCCAGGGCCTG...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCTCCAAGGATGTCCCTaGAGCCCTCCAGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGLQGCP*SPPAGA
Trigger: GGCACCAGCTGGAGGGCTCCAGGGACATCCTTGGAG...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTGGCTGCACGCCTCTCTaGCATCACAGTCCGCACGGA +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPGCTPL*HHSPHG
Trigger: TCCGTGCGGACTGTGATGCCAGAGAGGCGTGCAGCC...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 72 bp TCTGCCTTGTGGGGACCACCCAAGCCCTCTCCCGACTaGCCCAGAGGCTGCACGCCTCTCTGGCATCACAGT +
Preference number: 4 (lower is better)
Translates to: SALWGPPKPSPD*PRGCTPLWHHS
Trigger: ACTGTGATGCCAGAGAGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGACGCATGCTCCCAGGTaGGGGGTGAGTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGTHAPR*GVSSGP
Trigger: AGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGT...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCTCTGGTTCTCTTCCGTaGGCTCCTGGACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGSGSLP*APGHSG
Trigger: CCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGA...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp CAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGGCAGGCTGGCGGGTGTaGTCTGACTGGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QEKCWPEGGSHLGPVGAEAGWRV*SDWLCG
Trigger: GCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGC...CTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCCCCTGAAAGCTGCCTaGAGCACCACAGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDPLKAA*STTAAS
Trigger: TGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTCACGCTGGGTGGCTCTaGGCCATGTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPHAGWL*AMCFAC
Trigger: GCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTG...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCACGCTGGGTGGCTCTaGGCCATGTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGHAGWL*AMCFAC
Trigger: GCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTG...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGTCCCCGTGTGTGGCTaGAGCCGATCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVVPVCG*SRSPPG
Trigger: ACCAGGAGGAGATCGGCTTCAGCCACACACGGGGAC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGTCCCCGTGTGTGGCTaGAGCCGATCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWVPVCG*SRSPPG
Trigger: ACCAGGAGGAGATCGGCTTCAGCCACACACGGGGAC...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACCCATTGGGTCTCTCCTaGGACAGCGGCCAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHPLGLS*DSGQPR
Trigger: CCGGGGCTGGCCGCTGTCTCAGGAGAGACCCAATGG...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCCAGGCTCAGCTTAGGTaGCTCAGAAGGCCGCCATGC +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSQAQLR*LRRPPC
Trigger: GCATGGCGGCCTTCTGAGTCACCTAAGCTGAGCCTG...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTCAGCTGTCTGGTGGGTaGTGTGAACCAAGGGACACC +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFQLSGG*CEPRDT
Trigger: GGTGTCCCTTGGTTCACATCACCCACCAGACAGCTG...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVRPAPR*PGTWWR
Trigger: CCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCT...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRRPAPR*PGTWWR
Trigger: CCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCT...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGCAGAGGCATGCTCCCTaGCGTCCTGAGGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWQRHAP*RPEGPP
Trigger: TGGAGGTCCCTCAGGACGGCAGGGAGCATGCCTCTG...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACTGGGATCCAGGAGCTaGTCTATCTGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRLGSRS*SICRSF
Trigger: GAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAG...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAGATGGTTGGGGAGGTaGTCAGCACGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGRWLGR*SARGPG
Trigger: ACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTCGTGGTCCTTGTTGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGCTGGTCAGCAGCCGGGGCTTaGTCCACTCCACATAACCCT +
Preference number: 4 (lower is better)
Translates to: ARGPCCGPLVAVCAAQSWSAAGA*STPHNP
Trigger: AGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGA...CCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp AGATGGTTGGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTTCAGGCTCTGGTTCTCCAGCTCCACAATaGGCCTCAGCAGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: RWLGRCSARGPGPPSGSGSPAPQ*ASAAGA
Trigger: AGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA...ACCAGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGTCTCCAGCTCCACAATaGGCCTCAGCAGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTSPAPQ*ASAAGA
Trigger: AGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGTCTCCAGCTCCACAATaGGCCTCAGCAGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKSPAPQ*ASAAGA
Trigger: AGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGATGGTTGGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTTCAGGCTCTGGTGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RWLGRCSARGPGPPSGSGARGPC*GPLVAV
Trigger: GACAGCCACGAGGGGACCGCAACAAGGACCACGAGC...ACCAGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFARGPC*GPLVAV
Trigger: GACAGCCACGAGGGGACCGCAACAAGGACCACGAGC...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHARGPC*GPLVAV
Trigger: GACAGCCACGAGGGGACCGCAACAAGGACCACGAGC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGCCTCTTCACTCTGAAGGTGTCTGTCAGACAGTCAGGAGTGCCGCCGGGGACGCTTGCTCGCAGTGCCTaGTGCTGGGAGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLFTLKVSVRQSGVPPGTLARSA*CWEWEL
Trigger: CAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAG...CGTCCCCGGCGGCACTCCTGACTGTCTGACAGACACCTTCAGAGTGAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGGCCCGGGCCAGGTGTaGCCGCAGAGCGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRGPGQV*PQSGLD
Trigger: ATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCC...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGTTACCGGTAGCACTGTaGCTGGCCCGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTLPVAL*LARARC
Trigger: ACACCTGGCCCGGGCCAGGCACAGTGCTACCGGTAA...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATCTTCTCTTCCCCTCCTaGCTAAGTCCCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYLLFPS*LSPRRA
Trigger: GGCCCTGCGGGGACTTAGGCAGGAGGGGAAGAGAAG...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACCACTCACCCCAGGCCTaGGGGAACGGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHHSPQA*GNGGLG
Trigger: ACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTG...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTACCACAGCCAGCGCATaGGACCAGCGTCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGTTASA*DQRRLA
Trigger: AGCCAAACGACGCTGGTCGCATGCGCTGGCTGTGGT...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GGGAGCTGGGAGCTCTTGGGCCTTATGAGGAACTTCCGGGCAATCCTCTTTCTCGCCCCTCAGGGTTGCTaGCTCGGGCGTCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GSWELLGLMRNFRAILFLAPQGC*LGRPGL
Trigger: CAGACCCGGACGCCCGAGCCAGCAACCCTGAGGGGC...GAGAAAGAGGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGARCPGT*WRRCPA
Trigger: GGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCG...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGCTGGGTCAGACTTCCTaGCTTTGCGGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATLGQTS*LCGSQP
Trigger: TGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAG...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAATCCGTGCCGCGGCTaGGATCCAGGAGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGNPCRG*DPGAAL
Trigger: TAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCTTGCCAAGAGGGTCTaGAGACGATGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWLAKRV*RRCTSS
Trigger: CGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAG...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGTCTTCCGTGAGCTCCTaGACACTCCGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATSSVSS*TLRDKL
Trigger: GAGCTTGTCCCGGAGTGTCCAGGAGCTCACGGAAGA...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGCCTCTTCACTCTGAAGGTGTCTGTCAGACAGTCAGGAGTGCCGCCGGGGACGTGTGCAGCGCAGAGCTaGATGCAAGGCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GLFTLKVSVRQSGVPPGTCAAQS*MQGRLA
Trigger: CGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACA...CGTCCCCGGCGGCACTCCTGACTGTCTGACAGACACCTTCAGAGTGAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACTGTGCAGCGCAGAGCTaGATGCAAGGCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDCAAQS*MQGRLA
Trigger: CGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACA...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGTGTGCAGCGCAGAGCTaGATGCAAGGCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWCAAQS*MQGRLA
Trigger: CGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACA...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGTTGCGGTCCCCTCGTaGCTGTCTGTGCAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVVAVPS*LSVQRR
Trigger: TCTGCGCTGCACAGACAGCCACGAGGGGACCGCAAC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGGCACAGGAGAGCTCTaGTCTGGGAGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEGTGEL*SGRPGT
Trigger: CGTGCCAGGCCTCCCAGACCAGAGCTCTCCTGTGCC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYARRAD*MMTMAS
Trigger: GGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVARRAD*MMTMAS
Trigger: GGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCCAGAGGCCGCACACATaGGGTGACGGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIQRPHT*GDGDCP
Trigger: GGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCGGCCTCTGCAGCTGCTaGCTCCACAGGCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSGLCSC*LHRLRT
Trigger: CGTGCGGAGCCTGTGGAGCCAGCAGCTGCAGAGGCC...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGCTGGCAAGCAGGGATaGCTTGGGACAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEAGKQG*LGTAPQ
Trigger: CTGGGGCGCTGTCCCAAGCCATCCCTGCTTGCCAGC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCAGTGGGGCCAGGCCCTaGAGACTGACATCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSSGARP*RLTSPV
Trigger: CACAGGAGATGTCAGTCTCCAGGGCCTGGCCCCACT...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAGTGGGGCCAGGCCCTaGAGACTGACATCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGSGARP*RLTSPV
Trigger: CACAGGAGATGTCAGTCTCCAGGGCCTGGCCCCACT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGCGGGTACTGCACCTGTaGCTCACCAGCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTRVLHL*LTSHLH
Trigger: GTGCAGGTGGCTGGTGAGCCACAGGTGCAGTACCCG...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCTGGCTCGGACCCATaGCGGGGTTTGTGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGAGSDP*RGLCVN
Trigger: GTTGACACACAAACCCCGCCATGGGTCCGAGCCAGC...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGACAGCCCGGGCTTCCTaGAGGTGGCCACTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWTARAS*RWPLFG
Trigger: GCCAAAGAGTGGCCACCTCCAGGAAGCCCGGGCTGT...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGACAGCCCGGGCTTCCTaGAGGTGGCCACTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKTARAS*RWPLFG
Trigger: GCCAAAGAGTGGCCACCTCCAGGAAGCCCGGGCTGT...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAAGAGGCAGCTCCAGATaGGACACTCCTCCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRRGSSR*DTPPFR
Trigger: ACGGAAGGGAGGAGTGTCCCATCTGGAGCTGCCTCT...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACGCATGCTCCCAGGTaGGGGGTGAGTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVETHAPR*GVSSGP
Trigger: AGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCACGCATGCTCCCAGGTaGGGGGTGAGTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLITHAPR*GVSSGP
Trigger: AGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGT...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACCTGGCGGGTGTGATCTaGCTGGCTCTGCGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHLAGVI*LALRRV
Trigger: CACACGCCGCAGAGCCAGTCAGATCACACCCGCCAG...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGAGCTCTTGGGCCTTATaGGGAACTTCCGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLSSWAL*GTSGQS
Trigger: GGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCT...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCCCCCTGAAAGCTGCCTaGAGCACCACAGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIPLKAA*STTAAS
Trigger: TGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGG...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGCACGCTGGGTGGCTCTaGGCCATGTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVHAGWL*AMCFAC
Trigger: GCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTG...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCGTCCCCGTGTGTGGCTaGAGCCGATCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIVPVCG*SRSPPG
Trigger: ACCAGGAGGAGATCGGCTTCAGCCACACACGGGGAC...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGACGGCGTGGAGACAGTaGCGGGGACCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGTAWRQ*RGPKLE
Trigger: TTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATCCTGGCCTGCTGGGCTaGGATCGAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYPGLLG*DRANPG
Trigger: ACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGG...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGACCGCCACAGAGAATaGCCCAGGCTCAGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSDRHRE*PRLSLG
Trigger: ACCTAAGCTGAGCCTGGGTCATTCTCTGTGGCGGTC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTCTGGCTCCTAGGACCTaGAGCTTTGAGCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGLAPRT*SFELAS
Trigger: GCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAG...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTACTGGTTCCCAAGAGTaGGCACGTCCCGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFTGSQE*ARPAET
Trigger: TGTTTCTGCGGGACGTGCTCACTCTTGGGAACCAGT...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGATTGGCCTCCAAGCCTaGGGCAGGAAAGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVIGLQA*GRKALS
Trigger: GGAGAGGGCTTTCCTGCCTCAGGCTTGGAGGCCAAT...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCTCCCCATCCTGGATaGGCAGGACACGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLISPHPG*AGHAGE
Trigger: CTCCCCAGCGTGTCCTGCTCATCCAGGATGGGGAGA...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTCAGCTGTCTGGTGGGTaGTGTGAACCAAGGGACACC +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPQLSGG*CEPRDT
Trigger: GGTGTCCCTTGGTTCACATCACCCACCAGACAGCTG...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGGAGAAATGCTGGCCTaGAGGAGGAAGCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWGEMLA*RRKPPR
Trigger: CCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCC...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVPSHSF*GVRDAR
Trigger: CCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGG...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELPSHSF*GVRDAR
Trigger: CCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGG...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGCAGACTTCCTGGCTTTaGGGTTCCCAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATQTSWL*GSQPQL
Trigger: AAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTG...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTTCAGACAGTCAGGAGTaGCGCCGGGGACGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPASDSQE*RRGRQS
Trigger: GGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGA...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGCTGCCCATCTTCTTCTaGCTTTTGGCGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLLPIFF*LLAPVF
Trigger: GAAGACGGGCGCCAAAAGGCAGAAGAAGATGGGCAG...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGAGATGGTTGGGGAGGTaGTCAGCACGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWRWLGR*SARGPG
Trigger: ACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGAGATGGTTGGGGAGGTaGTCAGCACGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVRWLGR*SARGPG
Trigger: ACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGCAGCGCAGAGCTGGATaGAAGGCAGGCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKAQRRAG*KAGWRV
Trigger: CACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTG...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTCTCTCTGCAGCAGCTaGTCCTGCAGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSSLCSS*SCSAVR
Trigger: GCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACTCTCTCTGCAGCAGCTaGTCCTGCAGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHSLCSS*SCSAVR
Trigger: GCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGA...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGACCTCCAAATCTCTCTaGAGCAGCTGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWTSKSL*SSCSCS
Trigger: GCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGT...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRATFHWA*RTLAAA
Trigger: CGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGT...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGATGTCCCCTGAAAGCTaGCTGAAGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGMSPES*LKHHSR
Trigger: GCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGACAT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRTMASS*TGLPVA
Trigger: GGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGT...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGCTCCCTGGCATCTaGGAGTTCACGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDGLPGI*EFTADV
Trigger: CACATCTGCCGTGAACTCGCAGATGCCAGGGAGCCC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGGGCAGGCGGCAAGGTaGTGTCAGAGAACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYGQAAR*CQRTCH
Trigger: GTGACACGTTCTCTGACAGCACCTTGCCGCCTGCCC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGGGCAGGCGGCAAGGTaGTGTCAGAGAACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVGQAAR*CQRTCH
Trigger: GTGACACGTTCTCTGACAGCACCTTGCCGCCTGCCC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTTGGAACGGCGAGCCTaGCTCCTCACCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLILERRA*LLTLLS
Trigger: GGAGAGGAGGGTGAGGAGGCAGGCTCGCCGTTCCAA...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACCAGGCCTGGGCTGTaGAGGGGTCTAGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVETRPGL*RGLDAP
Trigger: AGGGGCATCTAGACCCCTGCACAGCCCAGGCCTGGT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGAAGGCCGCCATGCTaGAGAAAAGGCGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVERRPPC*RKGAQG
Trigger: CCCCTGGGCGCCTTTTCTGCAGCATGGCGGCCTTCT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTACAAGTGGGAGCAGCTaGCACAAGAGAACGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFTSGSS*HKRTEG
Trigger: ACCCTCCGTTCTCTTGTGGCAGCTGCTCCCACTTGT...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTAAAGAGCAGCCCAGCTaGACCAGAGGACATGGCGGT +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPKEQPS*TRGHGG
Trigger: ACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTT...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCAGCCCTCTCCCGACTTaGCCAGAGGCTGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSSPLPT*PEAARL
Trigger: GAGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCT...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGACCACAGCCAGCGCATaGGACCAGCGTCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTTTASA*DQRRLA
Trigger: AGCCAAACGACGCTGGTCGCATGCGCTGGCTGTGGT...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGAATCCGTGCCGCGGCTaGGATCCAGGAGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWNPCRG*DPGAAL
Trigger: TAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATT...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGAATCCGTGCCGCGGCTaGGATCCAGGAGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKNPCRG*DPGAAL
Trigger: TAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATT...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTGCCAAGAGGGTCTaGAGACGATGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGLAKRV*RRCTSS
Trigger: CGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAG...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTCTTGCCAAGAGGGTCTaGAGACGATGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGLAKRV*RRCTSS
Trigger: CGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAG...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTCCTGTGTCTTGGAGATaGTTGGGGAGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFPVSWR*LGRCSA
Trigger: TGCTGAGCACCTCCCCAACCATCTCCAAGACACAGG...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEPRRRS*SLLRSP
Trigger: AGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELGPAGL*PRRLFS
Trigger: GGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCC...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGTTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGLYTFH*ACRTLA
Trigger: GGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAA...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACGGAGGCCTGGCACGCTaGGTGGCTCTGAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHGGLAR*VALSHV
Trigger: CACATGGCTCAGAGCCACCCAGCGTGCCAGGCCTCC...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATCCGTGGCCTGGGCGATaGGGCTCGGAACGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNPWPGR*GSERGA
Trigger: TGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGG...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGGCGTCCCCGTGTGTaGCTGAAGCCGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVERRPRV*LKPISS
Trigger: GGAGGAGATCGGCTTCAGCCACACACGGGGACGCCT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGGGGATGCGAGCCGCTaGCCCTCCCCAGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHGDASR*PSPENK
Trigger: TTTATTCTCTGGGGAGGGCCAGCGGCTCGCATCCCC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCATGGTGTCGGCGCTaGTTGCGGATAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHAWCRR*LRIAAP
Trigger: AGGAGCTGCTATCCGCAACCAGCGCCGACACCATGC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCCGGGGTGTGTCTGCCTaGCCTGCTGGGCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSRGVSA*PAGLRS
Trigger: CGATCTCAGCCCAGCAGGCCAGGCAGACACACCCCG...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTCGTGGACGGAAGCCTTaGGAGAAGCTGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGRGRKP*EKLSAV
Trigger: CACAGCTGACAGCTTCTCCCAAGGCTTCCGTCCACG...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTGAACGGTGGTCTTGGTaGTCTTCTCTGGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFERWSW*SSLALP
Trigger: TGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTC...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGGCCTGCGGGAACGGTaGTCTTGGTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVGLRER*SWWSSL
Trigger: CAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGAGGGATCAAGGGCATaGTCCTCACGTCTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGEGSRA*SSRLVR
Trigger: CCTGACGAGACGTGAGGACCATGCCCTTGATCCCTC...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACCTGCCAGCAGGCCCTTaGGAGCTTGGCGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHLPAGP*ELGEVG
Trigger: TCCCACCTCGCCAAGCTCCCAAGGGCCTGCTGGCAG...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 72 bp TTGGTGGTCTTCTCTGGCCCTTCCACCTCTTCTGCCTaGTGGGGACCACCCAAGCCCTCTCCCGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVVFSGPSTSSA*WGPPKPSPDLP
Trigger: GGGCAAGTCGGGAGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGGCCAGAGAAGACCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTTGCTCCCTGCCGTCCTaGGGGACCTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGACSLPS*GTSRRP
Trigger: TGGCCTCCTGGAGGTCCCTCAGGACGGCAGGGAGCA...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGATCTGGTTCTCTTCCGTaGGCTCCTGGACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRSGSLP*APGHSG
Trigger: CCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGA...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCTGGTTCTCTTCCGTaGGCTCCTGGACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLISGSLP*APGHSG
Trigger: CCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGA...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GGGAGCTGGGAGCTCTTGGGCCTTATGAGGAACTTCCGGGCAATCCTCTTTCTCCTGGCGGGTGTGATCTaGCTGGCTCTGCGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GSWELLGLMRNFRAILFLLAGVI*LALRRV
Trigger: CACACGCCGCAGAGCCAGTCAGATCACACCCGCCAG...GAGAAAGAGGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR TCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGAGCTCTTGGGCCTTATaGGGAACTTCCGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGSSWAL*GTSGQS
Trigger: GGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTCCCCTGAAAGCTGCCTaGAGCACCACAGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPAPLKAA*STTAAS
Trigger: TGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGG...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGCGTGGAGACAGTaGCGGGGACCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVTAWRQ*RGPKLE
Trigger: TTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGT...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTGCAAATCCTGGTTGTTaGGGGTGTCACCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFANPGC*GCHQEE
Trigger: CTCTTCCTGGTGACACCCTCAACAACCAGGATTTGC...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGACCGCCACAGAGAATaGCCCAGGCTCAGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHDRHRE*PRLSLG
Trigger: ACCTAAGCTGAGCCTGGGTCATTCTCTGTGGCGGTC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCGGGCCATCGGCCTTCTaGCCGCCACAGAGAATGACC +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSGPSAF*PPQRMT
Trigger: GGTCATTCTCTGTGGCGGTCAGAAGGCCGATGGCCC...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGCGAGGTGGGAGCCTTaGGAAATAGCTGGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRARWEP*EIAGSD
Trigger: GTCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGC...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCTGGCCACTCTTTGGCTaGGACCTCAGCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFWPLFG*DLSRPA
Trigger: AGCTGGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCA...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGCAGAGGCATGCTCCCTaGCGTCCTGAGGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKAQRHAP*RPEGPP
Trigger: TGGAGGTCCCTCAGGACGGCAGGGAGCATGCCTCTG...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTCAGACTTCCTGGCTTTaGGGTTCCCAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPQTSWL*GSQPQL
Trigger: AAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTG...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGTCAGACAGTCAGGAGTaGCGCCGGGGACGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELSDSQE*RRGRQS
Trigger: GGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGA...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCTCAGACAGTCAGGAGTaGCGCCGGGGACGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFSDSQE*RRGRQS
Trigger: GGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGA...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWRSCSI*RSFLLF
Trigger: AAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCT...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCTGGGATCCAGGAGCTaGTCTATCTGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDLGSRS*SICRSF
Trigger: GAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGCTGGGATCCAGGAGCTaGTCTATCTGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVLGSRS*SICRSF
Trigger: GAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAG...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGCTGGGATCCAGGAGCTaGTCTATCTGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKLGSRS*SICRSF
Trigger: GAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAG...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCCTGCCCATCTTCTTCTaGCTTTTGGCGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWALPIFF*LLAPVF
Trigger: GAAGACGGGCGCCAAAAGGCAGAAGAAGATGGGCAG...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TTCTTCTCCAGCTCCACAATGCGCCTCAGCAGCCGGGGCTTGCTCCACTCCACAAGATGGTTGGGGAGGTaGTCAGCACGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FFSSSTMRLSSRGLLHSTRWLGR*SARGPG
Trigger: ACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT...TGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCTCAGCAGCCGGGGCTTaGTCCACTCCACATAACCCT +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFSAAGA*STPHNP
Trigger: AGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGA...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGTCAGCAGCCGGGGCTTaGTCCACTCCACATAACCCT +
Preference number: 4 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGSAAGA*STPHNP
Trigger: AGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGA...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTTCTCCAGCTCCACAATaGGCCTCAGCAGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPASPAPQ*ASAAGA
Trigger: AGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCTGCAGCAGCTGCTCCTaGAGCGCGGTCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVCSSCS*SAVRSS
Trigger: GGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCA...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGTCTCTCTGCAGCAGCTaGTCCTGCAGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVSLCSS*SCSAVR
Trigger: GCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGA...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTACCTCCAAATCTCTCTaGAGCAGCTGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGTSKSL*SSCSCS
Trigger: GCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGT...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTACCTCCAAATCTCTCTaGAGCAGCTGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPTSKSL*SSCSCS
Trigger: GCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGT...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGATCCGGCGGCCAGTCTTaGTCGCAGTGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRSGGQS*SQCLLL
Trigger: CAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGA...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTTACCGGTAGCACTGTaGCTGGCCCGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSLPVAL*LARARC
Trigger: ACACCTGGCCCGGGCCAGGCACAGTGCTACCGGTAA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGACAGCGGGGTGTGTCTaGCTGGCCTGCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVTAGCV*LACWAE
Trigger: CTCAGCCCAGCAGGCCAGGCAGACACACCCCGCTGT...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACCCACCACGAGCCTATaGTGTCCCTTGGAACGGCGA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRPTTSL*CPLERR
Trigger: TCGCCGTTCCAAGGGACAGCATAGGCTCGTGGTGGG...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCATGGAGCTTGGGAGTaGAGAGGCCGCACACATGGG +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEHGAWE*RGRTHG
Trigger: CCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCGGGGTGCTGTGGAAATaGAGACACCAGGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIGVLWK*RHQAWA
Trigger: AGCCCAGGCCTGGTGTCTGCATTTCCACAGCACCCC...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCAGAAGGCCGCCATGCTaGAGAAAAGGCGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSRRPPC*RKGAQG
Trigger: CCCCTGGGCGCCTTTTCTGCAGCATGGCGGCCTTCT...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTAAGAGCTGTGCCCTGTaGCAGGAAAGCCTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFKSCAL*QESLLY
Trigger: ATACAGGAGGCTTTCCTGGCACAGGGCACAGCTCTT...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAAATCCGTGCCGCGGCTaGGATCCAGGAGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRNPCRG*DPGAAL
Trigger: TAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATT...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGCTTGCCAAGAGGGTCTaGAGACGATGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTLAKRV*RRCTSS
Trigger: CGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAG...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCTCTTCCGTGAGCTCCTaGACACTCCGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFSSVSS*TLRDKL
Trigger: GAGCTTGTCCCGGAGTGTCCAGGAGCTCACGGAAGA...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACTCTTCCGTGAGCTCCTaGACACTCCGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDSSVSS*TLRDKL
Trigger: GAGCTTGTCCCGGAGTGTCCAGGAGCTCACGGAAGA...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGTCCTCCTTCAGGCTCTaGTTCTCTTCCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGSSFRL*FSSVSS
Trigger: GGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGA...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACTGTCTTGGAGATGGTTaGGGAGGTGCTCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDCLGDG*GGAQHA
Trigger: CGCGTGCTGAGCACCTCCCCAACCATCTCCAAGACA...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCTGTCTTGGAGATGGTTaGGGAGGTGCTCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFCLGDG*GGAQHA
Trigger: CGCGTGCTGAGCACCTCCCCAACCATCTCCAAGACA...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTCCTGTGTCTTGGAGATaGTTGGGGAGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPPVSWR*LGRCSA
Trigger: TGCTGAGCACCTCCCCAACCATCTCCAAGACACAGG...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTTGTGCAGCGCAGAGCTaGATGCAAGGCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPACAAQS*MQGRLA
Trigger: CGCCAGCCTGCCTTGCATCCAGCTCTGCGCTGCACA...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGTTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGLYTFH*ACRTLA
Trigger: GGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAA...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACTTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHLYTFH*ACRTLA
Trigger: GGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAA...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAGGAGGCCTGGCACGCTaGGTGGCTCTGAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRAGGLAR*VALSHV
Trigger: CACATGGCTCAGAGCCACCCAGCGTGCCAGGCCTCC...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGGGCACAGGAGAGCTCTaGTCTGGGAGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELGTGEL*SGRPGT
Trigger: CGTGCCAGGCCTCCCAGACCAGAGCTCTCCTGTGCC...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKAARRAD*MMTMAS
Trigger: GGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGC...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGTCTGCCTGGCCTGCTaGGCTGAGATCGAGCAAATC +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYVCLAC*AEIEQI
Trigger: GATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGAC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGAGCTCCTCACTGGCTTaGGACAGGCCGTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGSSSLA*DRPCFA
Trigger: AGCAAAACACGGCCTGTCCCAAGCCAGTGAGGAGCT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTAGCCCAGCCCAGCCATaGAGCTTGGGAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPASPAQP*SLGVQR
Trigger: CCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCT...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGATGCAGACACCAGGCCTaGGCTGTGCAGGGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRCRHQA*AVQGSR
Trigger: TCTAGACCCCTGCACAGCCCAGGCCTGGTGTCTGCA...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACCGTGGACGGAAGCCTTaGGAGAAGCTGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHRGRKP*EKLSAV
Trigger: CACAGCTGACAGCTTCTCCCAAGGCTTCCGTCCACG...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGAGAACAGGCTGGGCTaGGGACACCTGTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEENRLG*GHLCPP
Trigger: AGGAGGACACAGGTGTCCCCAGCCCAGCCTGTTCTC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACCCATCCCTGAGTGACTaGGAGAGAACAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHPSLSD*ERTGWA
Trigger: AGCCCAGCCTGTTCTCTCCCAGTCACTCAGGGATGG...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCGCTGGCAAGCAGGGATaGCTTGGGACAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVAGKQG*LGTAPQ
Trigger: CTGGGGCGCTGTCCCAAGCCATCCCTGCTTGCCAGC...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCCCTGAAGCTTTGAGCTaGCAAGCAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSPEALS*QAGMAW
Trigger: CCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGG...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGGCTTTCGAGGTGGACTaGCTCCTAGGACCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGAFEVD*LLGPEA
Trigger: AGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGC...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGGACACCCAGGGTCATaGCACTGCCTGGATTCAGTT +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSGHPGS*HCLDSV
Trigger: AACTGAATCCAGGCAGTGCCATGACCCTGGGTGTCC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCGCTGGCTCGGACCCATaGCGGGGTTTGTGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIAGSDP*RGLCVN
Trigger: GTTGACACACAAACCCCGCCATGGGTCCGAGCCAGC...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCAGACAGGGTAGTTaGCACAGCGTAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVTRQGS*HSVGTA
Trigger: GGCAGTGCCTACGCTGTGCCAACTACCCTGTCTGGT...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGGCAGACCAGCTGCCCTaGTGCCAGAATCCAAATGAA +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWADQLP*CQNPNE
Trigger: TTCATTTGGATTCTGGCACCAGGGCAGCTGGTCTGC...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGAGGTGGCCACTCTTTaGCTGAGACCTCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKEVATL*LRPQQT
Trigger: GGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTC...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGATGTTGTGGGCCTTCCTaGCATAAGGCGACGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRCCGPS*HKATLS
Trigger: ACTAAGCGTCGCCTTATGCCAGGAAGGCCCACAACA...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR CAA 72 bp GCCTGGCCTGCTGGGCTGAGATCGAGCAAATCCTGGTaGTTGAGGGTGTCACCAGGAAGAGGGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: AWPAGLRSSKSW*LRVSPGRGGMV
Trigger: CACCATGCCCCCTCTTCCTGGTGACACCCTCAACAACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 72 bp GCTTTCGAGGTGGACTGGCTCCTAGGACCTGAAGCTTaGAGCTGGCAAGCAGGGATGGCTTGGGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: AFEVDWLLGPEA*SWQAGMAWDSA
Trigger: GGCGCTGTCCCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAACGCATGCTCCCAGGTaGGGGGTGAGTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRATHAPR*GVSSGP
Trigger: AGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGT...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCGTGGCCTCTTCACTCTaGAGGTGTCTGTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGVASSL*RCLSDS
Trigger: ACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCAC...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGCAGGCTGGCGGGTGTaGTCTGACTGGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGAGWRV*SDWLCG
Trigger: GCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGC...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGAGCTCTTGGGCCTTATaGGGAACTTCCGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVSSWAL*GTSGQS
Trigger: GGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCT...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGTCCCCGTGTGTGGCTaGAGCCGATCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVVPVCG*SRSPPG
Trigger: ACCAGGAGGAGATCGGCTTCAGCCACACACGGGGAC...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCGGAATCATCGGAGTTaGCGTCATCCCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDRNHRS*RHPQVE
Trigger: CTCTACCTGGGGATGACGTCAACTCCGATGATTCCG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACGGCGTGGAGACAGTaGCGGGGACCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVETAWRQ*RGPKLE
Trigger: TTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCGGGAAAGGACGGTGTaGGCGGGTGGGGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPRERTV*AGGAWS
Trigger: ACTCCATGCCCCACCCGCTCACACCGTCCTTTCCCG...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATCCATTGGGTCTCTCCTaGGACAGCGGCCAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNPLGLS*DSGQPR
Trigger: CCGGGGCTGGCCGCTGTCTCAGGAGAGACCCAATGG...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRTPVHA*SQVRGE
Trigger: CTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGT...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRATPVHA*SQVRGE
Trigger: CTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGT...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGRSCSI*RSFLLF
Trigger: AAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACTGGGATCCAGGAGCTaGTCTATCTGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRLGSRS*SICRSF
Trigger: GAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAG...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACC +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLSFRIL*FSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCT...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACC +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATSFRIL*FSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCT...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATSFSLH*CSSFRI
Trigger: GATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGA...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTGCCGTCCTTCTCCTTaGACTGCTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWACRPSP*TAVPAS
Trigger: TGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCA...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVARGPC*GPLVAV
Trigger: GACAGCCACGAGGGGACCGCAACAAGGACCACGAGC...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRARGPC*GPLVAV
Trigger: GACAGCCACGAGGGGACCGCAACAAGGACCACGAGC...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCACCTCCAAATCTCTCTaGAGCAGCTGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFTSKSL*SSCSCS
Trigger: GCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGT...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCGCCTGCAGGAGCTaGTTCACCTCCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWAFACRS*FTSKSL
Trigger: GAGAGATTTGGAGGTGAAGCAGCTCCTGCAGGCGAA...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAAGGTCGGCCTTCGCCTaGAGGAGCTGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRARSAFA*RSCFTS
Trigger: GGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCT...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGACTTGCTCGCAGTGCCTaGTGCTGGGAGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRLARSA*CWEWEL
Trigger: CAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAG...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGCTTGCTCGCAGTGCCTaGTGCTGGGAGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELLARSA*CWEWEL
Trigger: CAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAG...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTTCCGGCGGCCAGTCTTaGTCGCAGTGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPSGGQS*SQCLLL
Trigger: CAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGA...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNTMASS*TGLPVA
Trigger: GGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGT...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGGAGCTGGGAGCTCTTGGGCCTTATGAGGAACTTCCGGGCAATCCTCTTTCTCTTACCGGTAGCACTGTaGCTGGCCCGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GSWELLGLMRNFRAILFLLPVAL*LARARC
Trigger: ACACCTGGCCCGGGCCAGGCACAGTGCTACCGGTAA...GAGAAAGAGGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCATTACCGGTAGCACTGTaGCTGGCCCGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRALPVAL*LARARC
Trigger: ACACCTGGCCCGGGCCAGGCACAGTGCTACCGGTAA...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGTGTCCTCGGCAGCGCTaGCATCACGGCGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVCPRQR*HHGVET
Trigger: TGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACA...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCTAGGCCTCTGCAGCTaGTGGCTCCACAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPLGLCS*WLHRLR
Trigger: GCGGAGCCTGTGGAGCCAGCAGCTGCAGAGGCCTAG...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATCTCAACAGACGTGACTaGTGTCAACACAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYLNRRD*CQHSGA
Trigger: GGCCCCACTGTGTTGACAGCAGTCACGTCTGTTGAG...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGGCTCACCAGCCACCTaGACGGGGCCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGGSPAT*TGPASA
Trigger: GGCTGAAGCTGGCCCCGTGCAGGTGGCTGGTGAGCC...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCAAGAGCTGTGCCCTGTaGCAGGAAAGCCTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSKSCAL*QESLLY
Trigger: ATACAGGAGGCTTTCCTGGCACAGGGCACAGCTCTT...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHCPGTW*RRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCA...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGRAPEM*PLHSEG
Trigger: ACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAGTCTTCATATCGGTCTaGAGTTTGCTGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRVFISV*SLLMVP
Trigger: CGGCACCATCAGCAAACTCCAGACCGATATGAAGAC...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGGTCTTCATATCGGTCTaGAGTTTGCTGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWVFISV*SLLMVP
Trigger: CGGCACCATCAGCAAACTCCAGACCGATATGAAGAC...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCTCCTCCTTCAGGCTCTaGTTCTCTTCCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFSSFRL*FSSVSS
Trigger: GGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGA...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGTCCTCCTTCAGGCTCTaGTTCTCTTCCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWSSFRL*FSSVSS
Trigger: GGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGA...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GCCTCAGCAGCCGGGGCTTGCTCCACTCCACATAACCCTGTGTCTTGGAGATGGTGTCTTGGAGATGGTTaGGGAGGTGCTCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: ASAAGACSTPHNPVSWRWCLGDG*GGAQHA
Trigger: CGCGTGCTGAGCACCTCCCCAACCATCTCCAAGACA...CCATCTCCAAGACACAGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGGTTGCGGTCCCCTCGTaGCTGTCTGTGCAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELVAVPS*LSVQRR
Trigger: TCTGCGCTGCACAGACAGCCACGAGGGGACCGCAAC...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCACCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRAPRRRS*SLLRSP
Trigger: AGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGG...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGTTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVELYTFH*ACRTLA
Trigger: GGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAA...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLILYTFH*ACRTLA
Trigger: GGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAA...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp ATCTCTTCCAGGTTGGTAGTCTTCATATCGGTCTGGAGTTTGCTGATGGTGCCGGGGCTGCCCGTGGCCTaGGCGATGGGGCTCGGAACG +
Preference number: 4 (lower is better)
Translates to: ISSRLVVFISVWSLLMVPGLPVA*AMGLGT
Trigger: CGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCC...CGGCACCATCAGCAAACTCCAGACCGATATGAAGACTACCAACCTGGAAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRARRAD*MMTMAS
Trigger: GGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGC...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCAGGCGTCCCCGTGTGTaGCTGAAGCCGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFRRPRV*LKPISS
Trigger: GGAGGAGATCGGCTTCAGCCACACACGGGGACGCCT...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTCTTTAGCTCCTCACTaGCTTGGGACAGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGSLAPH*LGTGRV
Trigger: AACACGGCCTGTCCCAAGCCAGTGAGGAGCTAAAGA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCACAAGCCACTGTGTTaGGGCCATCGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEHKPLC*GHRPSD
Trigger: GTCAGAAGGCCGATGGCCCCAACACAGTGGCTTGTG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCCTTCGAACCGCAGGGTaGGGCGGGTCCTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFLRTAG*GGSCTL
Trigger: CAAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAG...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGCCTGAAGCTTTGAGCTaGCAAGCAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVPEALS*QAGMAW
Trigger: CCAAGCCATCCCTGCTTGCCAGCTCAAAGCTTCAGG...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGCTCACCTTTCCCATaGCTAGGCCCTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVESSPFP*LGPVHS
Trigger: GCTGTGGACAGGGCCTAGCCATGGGAAAGGTGAGCT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTAGCTTGCTGCTCCCATaGCTCAGCCCCACTCACAGC +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPASLLLP*LSPTHS
Trigger: GCTGTGAGTGGGGCTGAGCCATGGGAGCAGCAAGCT...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGCTCCAAGGATGTCCCTaGAGCCCTCCAGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVLQGCP*SPPAGA
Trigger: GGCACCAGCTGGAGGGCTCCAGGGACATCCTTGGAG...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACTCTTTCTCCCCATCCTaGATGAGCAGGACACGCTGG +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHSFSPS*MSRTRW
Trigger: CCAGCGTGTCCTGCTCATCCAGGATGGGGAGAAAGA...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCGGGAACGGTGGTCTTaGTGGTCTTCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVERERWS*WSSLAL
Trigger: AAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCAAGGAAGGGGGTTTCTaGTCCATCGGAGGGATCAAG +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSKEGGF*SIGGIK
Trigger: CTTGATCCCTCCGATGGACCAGAAACCCCCTTCCTT...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTGTGTGTCAACTCCCTaGTCCTCAGAGAATCCGAGC +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGCVSTP*SSENPS
Trigger: GCTCGGATTCTCTGAGGACCAGGGAGTTGACACACA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCGCCTTGAGAAATAGCTaGCTCGGACCCATGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSALRNS*LGPMAG
Trigger: CCCCGCCATGGGTCCGAGCCAGCTATTTCTCAAGGC...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCGCAGACCAGCTGCCCTaGTGCCAGAATCCAAATGAA +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGADQLP*CQNPNE
Trigger: TTCATTTGGATTCTGGCACCAGGGCAGCTGGTCTGC...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAGCACAAAGGACAAGCTaGGCCAAGGCGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRAAQRTS*AKAGPC
Trigger: ACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGC...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGAAACAGGAGAAATGCTaGCCTGAAGGAGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWKQEKC*PEGGSH
Trigger: GTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR CAA 72 bp AGGCCTGGCACGCTGGGTGGCTCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTCCGCGTGAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: RPGTLGGSEPCA*LAKSFVRVRCP
Trigger: GGGACATCTCACGCGGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTGCCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
3UTR CAA 72 bp TGGCCTGCTGGGCTGAGATCGAGCAAATCCTGGTTGTaGAGGGTGTCACCAGGAAGAGGGGGCATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: WPAGLRSSKSWL*RVSPGRGGMVS
Trigger: CGACACCATGCCCCCTCTTCCTGGTGACACCCTCAACAACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGGTGGCCTCTTCACTCTaGAGGTGTCTGTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVVASSL*RCLSDS
Trigger: ACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCAC...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGTGGCCTCTTCACTCTaGAGGTGTCTGTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWVASSL*RCLSDS
Trigger: ACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCAC...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGTGGCCTCTTCACTCTaGAGGTGTCTGTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTVASSL*RCLSDS
Trigger: ACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCAC...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCATCTGGTTCTCTTCCGTaGGCTCCTGGACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRASGSLP*APGHSG
Trigger: CCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGA...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAAGCTCTTGGGCCTTATaGGGAACTTCCGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRSSWAL*GTSGQS
Trigger: GGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCT...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GGGAGCTGGGAGCTCTTGGGCCTTATGAGGAACTTCCGGGCAATCCTCTTTCTCCACGCTGGGTGGCTCTaGGCCATGTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSWELLGLMRNFRAILFLHAGWL*AMCFAC
Trigger: GCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTG...GAGAAAGAGGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR TCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTACGGCGTGGAGACAGTaGCGGGGACCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPATAWRQ*RGPKLE
Trigger: TTCCAGTTTAGGTCCCCGTCACTGTCTCCACGCCGT...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTGTGTCTGTTGGCACTaGAAATCCACCATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGCVCWH*KSTIRA
Trigger: AGCTCGGATGGTGGATTTTCAGTGCCAACAGACACA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCCCTGGCCTGCTGGGCTaGGATCGAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFPGLLG*DRANPG
Trigger: ACCAGGATTTGCTCGATCTCAGCCCAGCAGGCCAGG...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHPSHSF*GVRDAR
Trigger: CCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGTCCACGTCGCTCTTCTaGACGTGCAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWSTSLF*TCNDFF
Trigger: AAAGAAGTCATTGCACGTGCAGAAGAGCGACGTGGA...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGTCCACGTCGCTCTTCTaGACGTGCAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLSTSLF*TCNDFF
Trigger: AAAGAAGTCATTGCACGTGCAGAAGAGCGACGTGGA...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GGCCTCTTCACTCTGAAGGTGTCTGTCAGACAGTCAGGAGTGCCGCCGGGGACGAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GLFTLKVSVRQSGVPPGTRSCSI*RSFLLF
Trigger: AAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCT...CGTCCCCGGCGGCACTCCTGACTGTCTGACAGACACCTTCAGAGTGAAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGRSCSI*RSFLLF
Trigger: AAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCT...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGSFSLH*CSSFRI
Trigger: GATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGA...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACTGCCCATCTTCTTCTaGCTTTTGGCGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRLPIFF*LLAPVF
Trigger: GAAGACGGGCGCCAAAAGGCAGAAGAAGATGGGCAG...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAAGATGGTTGGGGAGGTaGTCAGCACGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRARWLGR*SARGPG
Trigger: ACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCCAGCGCAGAGCTGGATaGAAGGCAGGCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGQRRAG*KAGWRV
Trigger: CACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTG...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTGCAGCAGCTGCTCCTaGAGCGCGGTCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGCSSCS*SAVRSS
Trigger: GGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACCTCCAAATCTCTCTaGAGCAGCTGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVETSKSL*SSCSCS
Trigger: GCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATTCCGGCGGCCAGTCTTaGTCGCAGTGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNSGGQS*SQCLLL
Trigger: CAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGA...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCCGGCGGCCAGTCTTaGTCGCAGTGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSGGQS*SQCLLL
Trigger: CAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGCGTGGGCAGAGACGGTaGAATGACAATATCGTCGGA +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTRGQRR*NDNIVG
Trigger: TCCGACGATATTGTCATTGCACCGTCTCTGCCCACG...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGCGTGGGCAGAGACGGTaGAATGACAATATCGTCGGA +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVRGQRR*NDNIVG
Trigger: TCCGACGATATTGTCATTGCACCGTCTCTGCCCACG...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTGTGTCTGCCTGGCCTaGTGGGCTGAGATCGAGCAA +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSCVCLA*WAEIEQ
Trigger: TTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACACA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACTGTGTCTGCCTGGCCTaGTGGGCTGAGATCGAGCAA +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHCVCLA*WAEIEQ
Trigger: TTGCTCGATCTCAGCCCAGCAGGCCAGGCAGACACA...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTGAACAGACATCACCCTaGTGTTCTCAGAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFEQTSP*CSQKQV
Trigger: CACTTGCTTCTGAGAACAGCAGGGTGATGTCTGTTC...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGCATGGAGCTTGGGAGTaGAGAGGCCGCACACATGGG +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVHGAWE*RGRTHG
Trigger: CCCATGTGTGCGGCCTCTGCACTCCCAAGCTCCATG...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATCTCCCCCAGCGAATGTaGAGGTGTCTCACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYLPQRM*RCLTFS
Trigger: TGAGAAAGTGAGACACCTGCACATTCGCTGGGGGAG...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGACATCTCCTGTGGCTaGTTGTTTAAAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSDISCG*LFKGHG
Trigger: CCCATGCCCTTTAAACAAGCAGCCACAGGAGATGTC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTGACATCTCCTGTGGCTaGTTGTTTAAAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGDISCG*LFKGHG
Trigger: CCCATGCCCTTTAAACAAGCAGCCACAGGAGATGTC...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGCGGGAGAGCAAACGCTaGTTCCAAAACCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVRESKR*FQNQRR
Trigger: CCTCCTTTGGTTTTGGAAGCAGCGTTTGCTCTCCCG...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATGCACAGCGTAGGCACTaGCAGCAGGCCCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNAQRRH*QQALGS
Trigger: GCTCCCAAGGGCCTGCTGGCAGTGCCTACGCTGTGC...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTGTGCTTGTACACCTTCCACTGGGCCTGCAGGACTCTGGCCGCGGCGTCTCAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SCACTPSTGPAGLWPRRLRAPEM*PLHSEG
Trigger: ACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCT...GAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFRAPEM*PLHSEG
Trigger: ACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCT...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGGGGCTTCTTTCCGGTaGTTTCAGAACTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGGASFR*FQNLPR
Trigger: TCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCC...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGTCCTCCTTCAGGCTCTaGTTCTCTTCCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVESSFRL*FSSVSS
Trigger: GGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGA...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGTGTCTTGGAGATGGTTaGGGAGGTGCTCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKACLGDG*GGAQHA
Trigger: CGCGTGCTGAGCACCTCCCCAACCATCTCCAAGACA...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGTTGCGGTCCCCTCGTaGCTGTCTGTGCAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGAVAVPS*LSVQRR
Trigger: TCTGCGCTGCACAGACAGCCACGAGGGGACCGCAAC...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGAGACGATGCACCTCCTCGTAGTATGTCTCCATGGCGATCCGCATCTCTTCCACCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GDDAPPRSMSPWRSASLPPRRRS*SLLRSP
Trigger: AGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGG...TGGAAGAGATGCGGATCGCCATGGAGACATACTACGAGGAGGTGCATCGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCCTCGGAGACGCTCGTaGTCCTTGTTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPPRRRS*SLLRSP
Trigger: AGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGG...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGAGATGGTTGGGGAGGTGCTCAGCACGCGGTCCAGGTCCTCCTTCAGGCTCTGACGGGGACCTAAACTaGAAAGTTCTTCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WRWLGRCSARGPGPPSGSDGDLN*KVLRGQ
Trigger: CTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTC...AGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGACGGGGACCTAAACTaGAAAGTTCTTCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDDGDLN*KVLRGQ
Trigger: CTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTCGTGGTCCTTGTTGCGGTCCCCTCGTGGCTGTCTGTGCAGCGCAGAGCTGGTTATCTTTCCAGTCGTaGTTCCTATGTCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: ARGPCCGPLVAVCAAQSWLSFQS*FLCPRQ
Trigger: CTGCCGAGGACATAGGAACCACGACTGGAAAGATAA...CCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCCACTACAGGGCTCCCTaGCATCTGCGAGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFHYRAP*HLRVHG
Trigger: GCCGTGAACTCGCAGATGCCAGGGAGCCCTGTAGTG...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGCTCCTCACTGGCTTaGGACAGGCCGTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVESSSLA*DRPCFA
Trigger: AGCAAAACACGGCCTGTCCCAAGCCAGTGAGGAGCT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATAACCAAATTCCTTCCTaGGAAGGGCAGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYNQIPS*EGQLWR
Trigger: CCTCCAGAGCTGCCCTTCCCAGGAAGGAATTTGGTT...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCCACAAGCCACTGTGTTaGGGCCATCGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSHKPLC*GHRPSD
Trigger: GTCAGAAGGCCGATGGCCCCAACACAGTGGCTTGTG...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGGAGGCCTCTCCGCTTaGTACTGTCTCCATGGAACA +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEGGLSA*YCLHGT
Trigger: TGTTCCATGGAGACAGTACCAAGCGGAGAGGCCTCC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCCTGCTGTCAACACAGTaGGGCCAGGCCCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFLLSTQ*GQALET
Trigger: AGTCTCCAGGGCCTGGCCCCACTGTGTTGACAGCAG...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGAACGGTGGTCTTGGTaGTCTTCTCTGGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRERWSW*SSLALP
Trigger: TGGAAGGGCCAGAGAAGACCACCAAGACCACCGTTC...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCACCGGGCCCTGGGTTaGAGTTTAGCCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPHRALG*SLALLG
Trigger: GCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTG...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTACCAGACAGGGTAGTTaGCACAGCGTAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPATRQGS*HSVGTA
Trigger: GGCAGTGCCTACGCTGTGCCAACTACCCTGTCTGGT...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCAAACAGGAGAAATGCTaGCCTGAAGGAGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWAKQEKC*PEGGSH
Trigger: GTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGCAGGCTGGCGGGTGTaGTCTGACTGGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHAGWRV*SDWLCG
Trigger: GCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp CTTAGTTTCTTCTCCAGCTCCACAATGCGCCTCAGCAGCCGGGGCTTGCTCCACAGCTCTTGGGCCTTATaGGGAACTTCCGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: LSFFSSSTMRLSSRGLLHSSWAL*GTSGQS
Trigger: GGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCT...GTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGAAGAAACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR TCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGAGCTCTTGGGCCTTATaGGGAACTTCCGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKASSWAL*GTSGQS
Trigger: GGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCT...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTCACGCTGGGTGGCTCTaGGCCATGTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGAHAGWL*AMCFAC
Trigger: GCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTG...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCAGAGACGGTGCAATaGCAATATCGTCGGAATCAT +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGAETVQ*QYRRNH
Trigger: ATGATTCCGACGATATTGTCATTGCACCGTCTCTGC...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATGGGCCATCGGCCTTCTaGCCGCCACAGAGAATGACC +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNGPSAF*PPQRMT
Trigger: GGTCATTCTCTGTGGCGGTCAGAAGGCCGATGGCCC...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGGGTGGCCCCATCCCTaGGTGACTGGGAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGGWPHP*VTGREQ
Trigger: CTGTTCTCTCCCAGTCACTCAGGGATGGGGCCACCC...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGCTGGCTCCTAGGACCTaGAGCTTTGAGCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVLAPRT*SFELAS
Trigger: GCTTGCCAGCTCAAAGCTTCAGGTCCTAGGAGCCAG...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCTCCCCATCCTGGATaGGCAGGACACGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSPHPG*AGHAGE
Trigger: CTCCCCAGCGTGTCCTGCTCATCCAGGATGGGGAGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTCCACGTCGCTCTTCTaGACGTGCAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGSTSLF*TCNDFF
Trigger: AAAGAAGTCATTGCACGTGCAGAAGAGCGACGTGGA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATC +
Preference number: 4 (lower is better)
Translates to: AIPGTKDKLGQGGALLWAIGPFL*QSPNKI
Trigger: GATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGAT...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATC +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPIGPFL*QSPNKI
Trigger: GATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGAT...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYSFSLH*CSSFRI
Trigger: GATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGA...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVSFSLH*CSSFRI
Trigger: GATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGA...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDSFSLH*CSSFRI
Trigger: GATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGA...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGATGCCGTCCTTCTCCTTaGACTGCTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRCRPSP*TAVPAS
Trigger: TGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCA...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACCTGCCCATCTTCTTCTaGCTTTTGGCGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHLPIFF*LLAPVF
Trigger: GAAGACGGGCGCCAAAAGGCAGAAGAAGATGGGCAG...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCTCCAGCTCCACAATaGGCCTCAGCAGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSPAPQ*ASAAGA
Trigger: AGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TTCGTGGGCAGAGACGGTGCAATGACAATATCGTCGGAATCATCGGAGTTGACGTCTCTCTGCAGCAGCTaGTCCTGCAGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: FVGRDGAMTISSESSELTSLCSS*SCSAVR
Trigger: GCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGA...CGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCATGTCCCCTGAAAGCTaGCTGAAGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVMSPES*LKHHSR
Trigger: GCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGACAT...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGATGTCCCCTGAAAGCTaGCTGAAGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELMSPES*LKHHSR
Trigger: GCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGACAT...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAATGTCCCCTGAAAGCTaGCTGAAGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRAMSPES*LKHHSR
Trigger: GCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGACAT...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGATGTCCCCTGAAAGCTaGCTGAAGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVMSPES*LKHHSR
Trigger: GCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGACAT...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCGTGGGCAGAGACGGTaGAATGACAATATCGTCGGA +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVERGQRR*NDNIVG
Trigger: TCCGACGATATTGTCATTGCACCGTCTCTGCCCACG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTGTCCTCGGCAGCGCTaGCATCACGGCGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGCPRQR*HHGVET
Trigger: TGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCAGAGTCAAAGGTGACTaGAGACAGACTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGRVKGD*RQTVIS
Trigger: GGAGATGACAGTCTGTCTGCAGTCACCTTTGACTCT...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476665.5
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATACCAGGCCTGGGCTGTaGAGGGGTCTAGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNTRPGL*RGLDAP
Trigger: AGGGGCATCTAGACCCCTGCACAGCCCAGGCCTGGT...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGGCTTGAGAATGCATTaGCATTTACCCAGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSGLRMH*HLPSEL
Trigger: AAGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGGAACAAAACCACACTaGAGCGTTCCAGGACCACAG +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEGTKPH*SVPGPQ
Trigger: CTGTGGTCCTGGAACGCTGCAGTGTGGTTTTGTTCC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATCACACCTCCGGGTACTaGACCTGTGGCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNHTSGY*TCGSPA
Trigger: GGCTGGTGAGCCACAGGTGCAGTACCCGGAGGTGTG...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATAGCCCTCTCCCGACTTaGCCAGAGGCTGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHSPLPT*PEAARL
Trigger: GAGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCT...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCGAAAGCTTTCCTTTTTaGTTTCGTGTCCAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGESFPF*FRVQGR
Trigger: CCGGCCTTGGACACGAAAGCAAAAAGGAAAGCTTTC...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611775.4
CDS-3UTR GCA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCAACAAACAGGAGAAATaGTGGCCTGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGNKQEK*WPEGGS
Trigger: GCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTTGTT...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGACTGGGTCAGACTTCCTaGCTTTGCGGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRLGQTS*LCGSQP
Trigger: TGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAG...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCGTAGTATGTCTCCATaGCGATCCGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGRSMSP*RSASLP
Trigger: TGGAAGAGATGCGGATCGCCATGGAGACATACTACG...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCCTTGCCAAGAGGGTCTaGAGACGATGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVLAKRV*RRCTSS
Trigger: CGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAG...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCTTCTTTCCGGTaGTTTCAGAACTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDGASFR*FQNLPR
Trigger: TCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGCCTGTGTCTTGGAGATaGTTGGGGAGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QEKCWPEGGSHLGPVGAEPVSWR*LGRCSA
Trigger: TGCTGAGCACCTCCCCAACCATCTCCAAGACACAGG...CTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHGPAGL*PRRLFS
Trigger: GGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCATTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRALYTFH*ACRTLA
Trigger: GGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAA...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GCACTGCTGTTCCAGCTTCAGGATCCTCTGCTTCAGCCCGTTAATGACCCAACTGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ALLFQLQDPLLQPVNDPTARRAD*MMTMAS
Trigger: GGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGC...AGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTTATCTTTCCAGTCGTaGTTCCTATGTCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGLSFQS*FLCPRQ
Trigger: CTGCCGAGGACATAGGAACCACGACTGGAAAGATAA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGGTGGGTGGAGGTTTGTaGAAAGCTTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWVGGGL*KAFLFA
Trigger: AGCAAAAAGGAAAGCTTTCCACAAACCTCCACCCAC...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCACGGTCAAGGTCGTaGGCAGGCGGCAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSRSRS*AGGKVL
Trigger: CAGCACCTTGCCGCCTGCCCACGACCTTGACCGTGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTAGATCGAGCAAATCCTaGTTGTTGAGGGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPRSSKS*LLRVSP
Trigger: TGGTGACACCCTCAACAACCAGGATTTGCTCGATCT...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCAACCAAATTCCTTCCTaGGAAGGGCAGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLINQIPS*EGQLWR
Trigger: CCTCCAGAGCTGCCCTTCCCAGGAAGGAATTTGGTT...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCTTATGTATGGAACATTaGCCTCCAAGCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSLCMEH*PPSLRQ
Trigger: CTGCCTCAGGCTTGGAGGCCAATGTTCCATACATAA...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTAGCTTGCTGCTCCCATaGCTCAGCCCCACTCACAGC +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPSLLLP*LSPTHS
Trigger: GCTGTGAGTGGGGCTGAGCCATGGGAGCAGCAAGCT...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACCAGGAGTCCCTTTCTTaGGGACTCACTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHQESLS*GLTLYF
Trigger: GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTG...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTCTTTCTCCCCATCCTaGATGAGCAGGACACGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSSFSPS*MSRTRW
Trigger: CCAGCGTGTCCTGCTCATCCAGGATGGGGAGAAAGA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGGCTGCACGCCTCTCTaGCATCACAGTCCGCACGGA +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGGCTPL*HHSPHG
Trigger: TCCGTGCGGACTGTGATGCCAGAGAGGCGTGCAGCC...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCCGGAATCATCGGAGTTaGCGTCATCCCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVRNHRS*RHPQVE
Trigger: CTCTACCTGGGGATGACGTCAACTCCGATGATTCCG...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTTCTTGGTCTCCACAGTaGCAGAATCCAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPSWSPQ*QNPTKF
Trigger: GAATTTGGTTGGATTCTGTCACTGTGGAGACCAAGA...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCACACTGGGCATCAGCTaGAGACACTGGCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLITLGIS*RHWLEN
Trigger: ATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGT...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TTCGTGGGCAGAGACGGTGCAATGACAATATCGTCGGAATCATCGGAGTTGACGACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FVGRDGAMTISSESSELTTPVHA*SQVRGE
Trigger: CTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGT...CGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGTCGCTCTTCTGCACGTaGAATGACTTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATSLFCT*NDFFNS
Trigger: TGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGA...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPARSCSI*RSFLLF
Trigger: AAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCT...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACC +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVESFRIL*FSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGTGCCGTCCTTCTCCTTaGACTGCTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QEKCWPEGGSHLGPVGAECRPSP*TAVPAS
Trigger: TGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCA...CTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTTGCCGTCCTTCTCCTTaGACTGCTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPACRPSP*TAVPAS
Trigger: TGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCA...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACCAGCGCAGAGCTGGATaGAAGGCAGGCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHQRRAG*KAGWRV
Trigger: CACCCGCCAGCCTGCCTTGCATCCAGCTCTGCGCTG...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACTGCAGCAGCTGCTCCTaGAGCGCGGTCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHCSSCS*SAVRSS
Trigger: GGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCA...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTTCGCCTGCAGGAGCTaGTTCACCTCCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSFACRS*FTSKSL
Trigger: GAGAGATTTGGAGGTGAAGCAGCTCCTGCAGGCGAA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCTGAGCCATGTGCTTTaGTTGCTAAGAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGLSHVL*LLRALS
Trigger: GGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAG...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGGCCCGGGCCAGGTGTaGCCGCAGAGCGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSGPGQV*PQSGLD
Trigger: ATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACCGTGGGCAGAGACGGTaGAATGACAATATCGTCGGA +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHRGQRR*NDNIVG
Trigger: TCCGACGATATTGTCATTGCACCGTCTCTGCCCACG...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCCCCACCACGAGCCTATaGTGTCCCTTGGAACGGCGA +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGPTTSL*CPLERR
Trigger: TCGCCGTTCCAAGGGACAGCATAGGCTCGTGGTGGG...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGGGGTGCTGTGGAAATaGAGACACCAGGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGGVLWK*RHQAWA
Trigger: AGCCCAGGCCTGGTGTCTGCATTTCCACAGCACCCC...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTCCCTTCCACCTCTTCTaGCTTGTGGGGACCACCCAA +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPPFHLF*LVGTTQ
Trigger: TTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGG...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGCCCTGCTTGGCTCTaGCCGCTAGTCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNSPAWL*PLVSVR
Trigger: CCTGACTGAGACTAGCGGGCAGAGCCAAGCAGGGCT...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGAATGCAGCCAAGCTTTaGTGTGCTTATCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGNAAKL*CAYLGG
Trigger: TCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCCGGGAGAGCAAACGCTaGTTCCAAAACCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSRESKR*FQNQRR
Trigger: CCTCCTTTGGTTTTGGAAGCAGCGTTTGCTCTCCCG...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGAACAAACAGGAGAAATaGTGGCCTGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWNKQEK*WPEGGS
Trigger: GCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTTGTT...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCACCTGTGTCTTGGAGATaGTTGGGGAGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRAPVSWR*LGRCSA
Trigger: TGCTGAGCACCTCCCCAACCATCTCCAAGACACAGG...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCACAGGAGAGCTCTaGTCTGGGAGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHGTGEL*SGRPGT
Trigger: CGTGCCAGGCCTCCCAGACCAGAGCTCTCCTGTGCC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACATGGCGGTTTATGTATaGAACATTGGCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDMAVYV*NIGLQA
Trigger: GGCTTGGAGGCCAATGTTCCATACATAAACCGCCAT...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACCTGCACCAGAGGACATaGCGGTTTATGTATGGAACA +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHLHQRT*RFMYGT
Trigger: TGTTCCATACATAAACCGCCATGTCCTCTGGTGCAG...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTAAGTTCAAGGTGATGTaGAGGTGTTGCAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFKFKVM*RCCSDN
Trigger: ATTGTCACTGCAACACCTCCACATCACCTTGAACTT...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGTGCTTACCCAGCCGTaGTCTGTACCAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVVLTQP*SVPDRV
Trigger: TACCCTGTCTGGTACAGACCACGGCTGGGTAAGCAC...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTAGAGGCAGCTCCAGATaGGACACTCCTCCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGARGSSR*DTPPFR
Trigger: ACGGAAGGGAGGAGTGTCCCATCTGGAGCTGCCTCT...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR CAA 72 bp TCCCTGGCATCTGCGAGTTCACGGCAGATGTGTCTGTaGGCACTGAAAATCCACCATCCGAGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLASASSRQMCL*ALKIHHPSCSW
Trigger: CCAGCTGCAGCTCGGATGGTGGATTTTCAGTGCCAACAGACACATCTGCCGTGAACTCGCAGATGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCTGCTCCCTGCCGTCCTaGGGGACCTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSCSLPS*GTSRRP
Trigger: TGGCCTCCTGGAGGTCCCTCAGGACGGCAGGGAGCA...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGTTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTLLVSV*ISSLKT
Trigger: GGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAA...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGTTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWLLVSV*ISSLKT
Trigger: GGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAA...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCGCAGAGACGGTGCAATaGCAATATCGTCGGAATCAT +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIAETVQ*QYRRNH
Trigger: ATGATTCCGACGATATTGTCATTGCACCGTCTCTGC...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCTGTGTCTGTTGGCACTaGAAATCCACCATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSCVCWH*KSTIRA
Trigger: AGCTCGGATGGTGGATTTTCAGTGCCAACAGACACA...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTTCTCAGAAGCAAGTGTaGTGCTGCTTTTGTAATTGG +
Preference number: 4 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPSQKQV*CCFCNW
Trigger: CCAATTACAAAAGCAGCATCACACTTGCTTCTGAGA...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCACCAACGTCGACCCTaGAGTGGTAGATGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHHQRRP*SGRWGL
Trigger: CAGGCCCCATCTACCACTTCAGGGTCGACGTTGGTG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATTTATCTTGGTGGATCTaGGCTAGGTTGGGCTATCTT +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYLSWWI*ARLGYL
Trigger: AAGATAGCCCAACCTAGCTCAGATCCACCAAGATAA...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGCGAGGTGGGAGCCTTaGGAAATAGCTGGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHARWEP*EIAGSD
Trigger: GTCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTCAGACTTCCTGGCTTTaGGGTTCCCAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGAQTSWL*GSQPQL
Trigger: AAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTG...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTCGCTCTTCTGCACGTaGAATGACTTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGSLFCT*NDFFNS
Trigger: TGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGTGCCGTCCTTCTCCTTaGACTGCTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVCRPSP*TAVPAS
Trigger: TGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCA...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCAGCAGCCGGGGCTTaGTCCACTCCACATAACCCT +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSAAGA*STPHNP
Trigger: AGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGCTCGTGGTCCTTGTTaGGGTCCCCTCGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHARGPC*GPLVAV
Trigger: GACAGCCACGAGGGGACCGCAACAAGGACCACGAGC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCATTCGCCTGCAGGAGCTaGTTCACCTCCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRAFACRS*FTSKSL
Trigger: GAGAGATTTGGAGGTGAAGCAGCTCCTGCAGGCGAA...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACCTTGCTCGCAGTGCCTaGTGCTGGGAGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHLARSA*CWEWEL
Trigger: CAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAG...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GCACTGCTGTTCCAGCTTCAGGATCCTCTGCTTCAGCCCGTTAATGACCCAACTATGTCCCCTGAAAGCTaGCTGAAGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: ALLFQLQDPLLQPVNDPTMSPES*LKHHSR
Trigger: GCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGACAT...AGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp TCGGGCCTTTTCTCTGCCAGAGTCCGAACAAAATCCGTGCCGCGGCTGGGATCCCTGAGCCATGTGCTTTaGTTGCTAAGAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SGLFSARVRTKSVPRLGSLSHVL*LLRALS
Trigger: GGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAG...GGATCCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACTGAGCCATGTGCTTTaGTTGCTAAGAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRLSHVL*LLRALS
Trigger: GGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAG...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCGGCCCGGGCCAGGTGTaGCCGCAGAGCGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGGPGQV*PQSGLD
Trigger: ATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCC...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGGAAAGCTTTCCTTTTTaGTTTCGTCTCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWESFPF*FRLHIR
Trigger: TCTGATGTGGAGACGAAAGCAAAAAGGAAAGCTTTC...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476665.5
CDS-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGGGCTCCCTGGCATCTaGGAGTTCACGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHGLPGI*EFTADV
Trigger: CACATCTGCCGTGAACTCGCAGATGCCAGGGAGCCC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVRAPEM*PLHSEG
Trigger: ACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCT...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGCGTAGTATGTCTCCATaGCGATCCGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QEKCWPEGGSHLGPVGAERSMSP*RSASLP
Trigger: TGGAAGAGATGCGGATCGCCATGGAGACATACTACG...CTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCCTTGCCAAGAGGGTCTaGAGACGATGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGLAKRV*RRCTSS
Trigger: CGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAG...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGGCTTCTTTCCGGTaGTTTCAGAACTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKAGASFR*FQNLPR
Trigger: TCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCC...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCTTCCGTGAGCTCCTaGACACTCCGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSSVSS*TLRDKL
Trigger: GAGCTTGTCCCGGAGTGTCCAGGAGCTCACGGAAGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGTTGCGGTCCCCTCGTaGCTGTCTGTGCAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHVAVPS*LSVQRR
Trigger: TCTGCGCTGCACAGACAGCCACGAGGGGACCGCAAC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACAGGCGTCCCCGTGTGTaGCTGAAGCCGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHRRPRV*LKPISS
Trigger: GGAGGAGATCGGCTTCAGCCACACACGGGGACGCCT...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGACGGGGACCTAAACTaGAAAGTTCTTCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFDGDLN*KVLRGQ
Trigger: CTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTC...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCTTTGGCGATGTGGGTaGAGGTTTGTGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVELWRCG*RFVESF
Trigger: AAAGCTTTCCACAAACCTCCACCCACATCGCCAAAG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402050.7
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCTGCACCAGAGGACATaGCGGTTTATGTATGGAACA +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVELHQRT*RFMYGT
Trigger: TGTTCCATACATAAACCGCCATGTCCTCTGGTGCAG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGGTCATGGCACTGCCTaGATTCAGTTTGGTAATCGT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEGHGTA*IQFGNR
Trigger: ACGATTACCAAACTGAATCCAGGCAGTGCCATGACC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGTGTTGTGGGCCTTCCTaGCATAAGGCGACGCTTAGT +
Preference number: 4 (lower is better)
Translates to: NRRNAGLKEEATSVLLELCCGPS*HKATLS
Trigger: ACTAAGCGTCGCCTTATGCCAGGAAGGCCCACAACA...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
3UTR CAA 72 bp AAGAAAAAGCTACTTTGTCCAACACCGGGCCCTGGGTaGGAGTTTAGCCCTGCTTGGCTCTGCCCGCTAGTC +
Preference number: 4 (lower is better)
Translates to: KKKLLCPTPGPG*EFSPAWLCPLV
Trigger: GACTAGCGGGCAGAGCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTGTTGGACAAAGTAGCTTTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCTGGCGGGTGTGATCTaGCTGGCTCTGCGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSLAGVI*LALRRV
Trigger: CACACGCCGCAGAGCCAGTCAGATCACACCCGCCAG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATTCTCAGAAGCAAGTGTaGTGCTGCTTTTGTAATTGG +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYSQKQV*CCFCNW
Trigger: CCAATTACAAAAGCAGCATCACACTTGCTTCTGAGA...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCACTGGTTCCCAAGAGTaGGCACGTCCCGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGTGSQE*ARPAET
Trigger: TGTTTCTGCGGGACGTGCTCACTCTTGGGAACCAGT...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCACACTGGGCATCAGCTaGAGACACTGGCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFTLGIS*RHWLEN
Trigger: ATTCTCAAGCCAGTGTCTTCAGCTGATGCCCAGTGT...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTCACCAACGTCGACCCTaGAGTGGTAGATGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAHQRRP*SGRWGL
Trigger: CAGGCCCCATCTACCACTTCAGGGTCGACGTTGGTG...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCACAATCAGTACACCGTaGACAACACCTGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVTISTP*TTPATN
Trigger: GTTGGTGGCAGGTGTTGTTCACGGTGTACTGATTGT...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGTCTCCTAAGCCATCTTaGCAGTTTCACATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVSPKPS*QFHISA
Trigger: AGCTGAAATGTGAAACTGTCAAGATGGCTTAGGAGA...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGTCGCTCTTCTGCACGTaGAATGACTTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKSLFCT*NDFFNS
Trigger: TGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGA...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATC +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKAIGPFL*QSPNKI
Trigger: GATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGAT...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACC +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVSFRIL*FSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCT...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACC +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVSFRIL*FSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCT...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGCTGAGCCATGTGCTTTaGTTGCTAAGAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QEKCWPEGGSHLGPVGAELSHVL*LLRALS
Trigger: GGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAG...CTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR GCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACAGAGTCAAAGGTGACTaGAGACAGACTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHRVKGD*RQTVIS
Trigger: GGAGATGACAGTCTGTCTGCAGTCACCTTTGACTCT...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402050.7
CDS-3UTR GCA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGAGCTTCAAGATGGATaGTGGCTTTTAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYELQDG*WLLKEQ
Trigger: CTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGAGCTTCAAGATGGATaGTGGCTTTTAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHELQDG*WLLKEQ
Trigger: CTGCTCTTTTAAAAGCCAGCATCCATCTTGAAGCTC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCACAGCGTAGGCACTaGCAGCAGGCCCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSAQRRH*QQALGS
Trigger: GCTCCCAAGGGCCTGCTGGCAGTGCCTACGCTGTGC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCTCGGGCGTCCGGGTCTaGGAATCCGCGGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLSGVRV*ESAGSP
Trigger: AGGGCTGCCCGCGGATTCCCAGACCCGGACGCCCGA...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGARAPEM*PLHSEG
Trigger: ACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCT...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp GGGAGCTGGGAGCTCTTGGGCCTTATGAGGAACTTCCGGGCAATCCTCTTTCTCGTCTTCATATCGGTCTaGAGTTTGCTGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GSWELLGLMRNFRAILFLVFISV*SLLMVP
Trigger: CGGCACCATCAGCAAACTCCAGACCGATATGAAGAC...GAGAAAGAGGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCTTCATATCGGTCTaGAGTTTGCTGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFVFISV*SLLMVP
Trigger: CGGCACCATCAGCAAACTCCAGACCGATATGAAGAC...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCGGGCTGCCCGTGGCCTaGGCGATGGGGCTCGGAACG +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSGLPVA*AMGLGT
Trigger: CGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCC...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCGTGGGTGGAGGTTTGTaGAAAGCTTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIVGGGL*KAFLFA
Trigger: AGCAAAAAGGAAAGCTTTCCACAAACCTCCACCCAC...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402050.7
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGAGAACAGGCTGGGCTaGGGACACCTGTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHENRLG*GHLCPP
Trigger: AGGAGGACACAGGTGTCCCCAGCCCAGCCTGTTCTC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCCATCCCTGAGTGACTaGGAGAGAACAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHPSLSD*ERTGWA
Trigger: AGCCCAGCCTGTTCTCTCCCAGTCACTCAGGGATGG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCAGCGAGCTTCAAGATaGATGCTGGCTTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDQRASR*MLAFKR
Trigger: TCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 72 bp GACGGTGCAATGACAATATCGTCGGAATCATCGGAGTaGACGTCATCCCCAGGTAGAGGTGCCAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: DGAMTISSESSE*TSSPGRGAKAC
Trigger: ACAGGCCTTGGCACCTCTACCTGGGGATGACGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR TCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCTGGCGGGTGTGATCTaGCTGGCTCTGCGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGLAGVI*LALRRV
Trigger: CACACGCCGCAGAGCCAGTCAGATCACACCCGCCAG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATGCAAATCCTGGTTGTTaGGGGTGTCACCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNANPGC*GCHQEE
Trigger: CTCTTCCTGGTGACACCCTCAACAACCAGGATTTGC...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCAGCTCAACAGACGTaGCTGCTGTCAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSAQQT*LLSTQW
Trigger: CCACTGTGTTGACAGCAGTCACGTCTGTTGAGCTGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACTTATCTTGGTGGATCTaGGCTAGGTTGGGCTATCTT +
Preference number: 4 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHLSWWI*ARLGYL
Trigger: AAGATAGCCCAACCTAGCTCAGATCCACCAAGATAA...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVRPAPR*PGTWWR
Trigger: CCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCTCAGACAGTCAGGAGTaGCGCCGGGGACGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGSDSQE*RRGRQS
Trigger: GGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGA...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGATCGCTCTTCTGCACGTaGAATGACTTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRSLFCT*NDFFNS
Trigger: TGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGA...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATC +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVIGPFL*QSPNKI
Trigger: GATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGAT...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TTCAGGATCCTCTGCTTCAGCCCGTTAATGACCCAACTGGCATCGGGCCTTTTCTTCGCCTGCAGGAGCTaGTTCACCTCCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: FRILCFSPLMTQLASGLFFACRS*FTSKSL
Trigger: GAGAGATTTGGAGGTGAAGCAGCTCCTGCAGGCGAA...GAAAAGGCCCGATGCCAGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLTMASS*TGLPVA
Trigger: GGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGT...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCGGCCCGGGCCAGGTGTaGCCGCAGAGCGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSGPGQV*PQSGLD
Trigger: ATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCC...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCTGTCCTCGGCAGCGCTaGCATCACGGCGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSCPRQR*HHGVET
Trigger: TGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACA...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTAAAGAGCAGCCCAGCTaGACCAGAGGACATGGCGGT +
Preference number: 4 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAKEQPS*TRGHGG
Trigger: ACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTCTTT...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGGAACAAAACCACACTaGAGCGTTCCAGGACCACAG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGGTKPH*SVPGPQ
Trigger: CTGTGGTCCTGGAACGCTGCAGTGTGGTTTTGTTCC...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACCTCAACAGACGTGACTaGTGTCAACACAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHLNRRD*CQHSGA
Trigger: GGCCCCACTGTGTTGACAGCAGTCACGTCTGTTGAG...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGRCPGT*WRRCPA
Trigger: GGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACCTGGGTCAGACTTCCTaGCTTTGCGGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHLGQTS*LCGSQP
Trigger: TGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAG...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLGPAGL*PRRLFS
Trigger: GGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCC...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTGCACAGGGCTGCCCGTaGCCTGGGCGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGAQGCP*PGRWGS
Trigger: CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGC...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGACAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGTGGGTGGAGGTTTGTaGAAAGCTTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RQQGPRQFQAQRTSWAKAVGGGL*KAFLFA
Trigger: AGCAAAAAGGAAAGCTTTCCACAAACCTCCACCCAC...CGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCACTTTGGCGATGTGGGTaGAGGTTTGTGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: RNAGLKEEATSVLLELRALWRCG*RFVESF
Trigger: AAAGCTTTCCACAAACCTCCACCCACATCGCCAAAG...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CCA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCAGATCGAGCAAATCCTaGTTGTTGAGGGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVRSSKS*LLRVSP
Trigger: TGGTGACACCCTCAACAACCAGGATTTGCTCGATCT...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGTCTGCCTGGCCTGCTaGGCTGAGATCGAGCAAATC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHVCLAC*AEIEQI
Trigger: GATTTGCTCGATCTCAGCCCAGCAGGCCAGGCAGAC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCCTATGCTGTCCCTTaGAACGGCGAGCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSAYAVP*NGEPAS
Trigger: GGAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCCCAGCCATGGAGCTTaGGAGTGCAGAGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSPSHGA*ECRGRT
Trigger: TGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCAAGTTCAAGGTGATGTaGAGGTGTTGCAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIKFKVM*RCCSDN
Trigger: ATTGTCACTGCAACACCTCCACATCACCTTGAACTT...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGGACACCCAGGGTCATaGCACTGCCTGGATTCAGTT +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHGHPGS*HCLDSV
Trigger: AACTGAATCCAGGCAGTGCCATGACCCTGGGTGTCC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGAGTTTAGCCCTGCTTaGCTCTGCCCGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHEFSPA*LCPLVS
Trigger: TGAGACTAGCGGGCAGAGCCAAGCAGGGCTAAACTC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCACCGGGCCCTGGGTTaGAGTTTAGCCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSHRALG*SLALLG
Trigger: GCCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCACGCATGCTCCCAGGTaGGGGGTGAGTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGTHAPR*GVSSGP
Trigger: AGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGT...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp AGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGATTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: RRNAGLKEEATSVLLELRLLVSV*ISSLKT
Trigger: GGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAA...TCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR TCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCCCCTGAAAGCTGCCTaGAGCACCACAGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGPLKAA*STTAAS
Trigger: TGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTTCTCCTAAGCCATCTTaGCAGTTTCACATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCQESLLYLQGCPWSPPASPKPS*QFHISA
Trigger: AGCTGAAATGTGAAACTGTCAAGATGGCTTAGGAGA...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVPSHSF*GVRDAR
Trigger: CCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGG...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACCAGACTTCCTGGCTTTaGGGTTCCCAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHQTSWL*GSQPQL
Trigger: AAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTG...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCACGCCAGTCCACGCATaGTCCCAGGTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGTPVHA*SQVRGE
Trigger: CTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGT...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTTCCACGTCGCTCTTCTaGACGTGCAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPSTSLF*TCNDFF
Trigger: AAAGAAGTCATTGCACGTGCAGAAGAGCGACGTGGA...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCTTGCTCGCAGTGCCTaGTGCTGGGAGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGLARSA*CWEWEL
Trigger: CAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCACGATGGCCTCCTCCTaGACAGGGCTGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSTMASS*TGLPVA
Trigger: GGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGT...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTGGCCCGGGCCAGGTGTaGCCGCAGAGCGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGGPGQV*PQSGLD
Trigger: ATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCC...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCGGCTCACCAGCCACCTaGACGGGGCCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVGSPAT*TGPASA
Trigger: GGCTGAAGCTGGCCCCGTGCAGGTGGCTGGTGAGCC...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCACACCTCCGGGTACTaGACCTGTGGCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGHTSGY*TCGSPA
Trigger: GGCTGGTGAGCCACAGGTGCAGTACCCGGAGGTGTG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGTTATCGGTGCTTTCTaGAGGTTTTTATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDVIGAF*RFLFLK
Trigger: TTTGAGGAATAAAAACCTGCAGAAAGCACCGATAAC...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCTTGAAGGTTATCGGTaGTTTCTGCAGGTTTTTATT +
Preference number: 4 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDLEGYR*FLQVFI
Trigger: AATAAAAACCTGCAGAAAGCACCGATAACCTTCAAG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATAGAGCGCCTGAGATGTaGCCTCTTCACTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHRAPEM*PLHSEG
Trigger: ACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCT...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCACTGCTGTTCCAGCTTCAGGATCCTCTGCTTCAGCCCGTTAATGACCCAACTGGGGCTTCTTTCCGGTaGTTTCAGAACTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ALLFQLQDPLLQPVNDPTGASFR*FQNLPR
Trigger: TCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCC...AGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp ATCTCTTCCAGGTTGGTAGTCTTCATATCGGTCTGGAGTTTGCTGATGGTGCCGCCTGTGTCTTGGAGATaGTTGGGGAGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISSRLVVFISVWSLLMVPPVSWR*LGRCSA
Trigger: TGCTGAGCACCTCCCCAACCATCTCCAAGACACAGG...CGGCACCATCAGCAAACTCCAGACCGATATGAAGACTACCAACCTGGAAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCGGAGGCCTGGCACGCTaGGTGGCTCTGAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLGGLAR*VALSHV
Trigger: CACATGGCTCAGAGCCACCCAGCGTGCCAGGCCTCC...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGACGGGGACCTAAACTaGAAAGTTCTTCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHDGDLN*KVLRGQ
Trigger: CTGCCCACGAAGAACTTTCCAGTTTAGGTCCCCGTC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCCAGGAAGAGGGGGCATaGTGTCGGCGCTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLQEEGA*CRRWLR
Trigger: CCGCAACCAGCGCCGACACCATGCCCCCTCTTCCTG...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCGCCTATGCTGTCCCTTaGAACGGCGAGCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGAYAVP*NGEPAS
Trigger: GGAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGC...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCGTGGACCCGGGCGGGTaGGGTGAAGGCAGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVVDPGG*GEGRGL
Trigger: TAGACCCCTGCCTTCACCCCACCCGCCCGGGTCCAC...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCCCCGCAGAAACAGCTTaGTTTAACAAGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGPAETA*FNKWEQ
Trigger: CTGCTCCCACTTGTTAAACCAAGCTGTTTCTGCGGG...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCTCTGGTTCTCTTCCGTaGGCTCCTGGACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGSGSLP*APGHSG
Trigger: CCCGGAGTGTCCAGGAGCTCACGGAAGAGAACCAGA...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTTTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPLLVSV*ISSLKT
Trigger: GGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAA...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACACAATCAGTACACCGTaGACAACACCTGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHTISTP*TTPATN
Trigger: GTTGGTGGCAGGTGTTGTTCACGGTGTACTGATTGT...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATGTGGAGGTGTTGCAGTaGCAATCAGTACACCGTGAA +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHVEVLQ*QSVHRE
Trigger: TTCACGGTGTACTGATTGTCACTGCAACACCTCCAC...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGTCGCTCTTCTGCACGTaGAATGACTTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVSLFCT*NDFFNS
Trigger: TGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGA...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TTCAGGATCCTCTGCTTCAGCCCGTTAATGACCCAACTGGCATCGGGCCTTTTCTCCACGTCGCTCTTCTaGACGTGCAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: FRILCFSPLMTQLASGLFSTSLF*TCNDFF
Trigger: AAAGAAGTCATTGCACGTGCAGAAGAGCGACGTGGA...GAAAAGGCCCGATGCCAGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTTGCAGCAGCTGCTCCTaGAGCGCGGTCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGCSSCS*SAVRSS
Trigger: GGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCA...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCAGGTCGGCCTTCGCCTaGAGGAGCTGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLRSAFA*RSCFTS
Trigger: GGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCT...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGTFHWA*RTLAAA
Trigger: CGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGT...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATCTGAGCCATGTGCTTTaGTTGCTAAGAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNLSHVL*LLRALS
Trigger: GGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAG...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCGAAAGCTTTCCTTTTTaGTTTCGTCTCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: SLLRLPRELSTFLGPASSESFPF*FRLHIR
Trigger: TCTGATGTGGAGACGAAAGCAAAAAGGAAAGCTTTC...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402050.7
CDS-3UTR GCA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCTTGAAGGTTATCGGTaGTTTCTGCAGGTTTTTATT +
Preference number: 4 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVELEGYR*FLQVFI
Trigger: AATAAAAACCTGCAGAAAGCACCGATAACCTTCAAG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCTCTTCCGTGAGCTCCTaGACACTCCGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSSSVSS*TLRDKL
Trigger: GAGCTTGTCCCGGAGTGTCCAGGAGCTCACGGAAGA...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCCCGCAGAAACAGCTTaGTTTAACAAGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHPAETA*FNKWEQ
Trigger: CTGCTCCCACTTGTTAAACCAAGCTGTTTCTGCGGG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCATGGCGGTTTATGTATaGAACATTGGCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGMAVYV*NIGLQA
Trigger: GGCTTGGAGGCCAATGTTCCATACATAAACCGCCAT...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACACCAGCACTGGACACTaGGCATCAGCTGAAGACACT +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHTSTGH*ASAEDT
Trigger: AGTGTCTTCAGCTGATGCCCAGTGTCCAGTGCTGGT...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACCAGGAGTCCCTTTCTTaGGGACTCACTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHQESLS*GLTLYF
Trigger: GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTG...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGGTCATGGCACTGCCTaGATTCAGTTTGGTAATCGT +
Preference number: 4 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGGHGTA*IQFGNR
Trigger: ACGATTACCAAACTGAATCCAGGCAGTGCCATGACC...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGCAGGCTGGCGGGTGTaGTCTGACTGGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYAGWRV*SDWLCG
Trigger: GCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGC...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATTCTTGGTCTCCACAGTaGCAGAATCCAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNSWSPQ*QNPTKF
Trigger: GAATTTGGTTGGATTCTGTCACTGTGGAGACCAAGA...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTGCCGCACACATGGGGTaGCGGGGACTGTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGAAHMG*RGLSQT
Trigger: TGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGC...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTGTGGAGGTGTTGCAGTaGCAATCAGTACACCGTGAA +
Preference number: 4 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAVEVLQ*QSVHRE
Trigger: TTCACGGTGTACTGATTGTCACTGCAACACCTCCAC...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCATCTCATTCAGATCTTaGAGGTTATCGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFISFRS*RLSVLS
Trigger: AGAAAGCACCGATAACCTTCAAGATCTGAATGAGAT...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATTCCACGTCGCTCTTCTaGACGTGCAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHSTSLF*TCNDFF
Trigger: AAAGAAGTCATTGCACGTGCAGAAGAGCGACGTGGA...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCAGGTCGGCCTTCGCCTaGAGGAGCTGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSRSAFA*RSCFTS
Trigger: GGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCT...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTAGGTCGGCCTTCGCCTaGAGGAGCTGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGRSAFA*RSCFTS
Trigger: GGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCT...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYTFHWA*RTLAAA
Trigger: CGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGT...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATCTGAGCCATGTGCTTTaGTTGCTAAGAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHLSHVL*LLRALS
Trigger: GGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAG...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACGGCTTGAGAATGCATTaGCATTTACCCAGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHGLRMH*HLPSEL
Trigger: AAGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCC...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCTGGGTCAGACTTCCTaGCTTTGCGGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGLGQTS*LCGSQP
Trigger: TGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGGGCTTCTTTCCGGTaGTTTCAGAACTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHGASFR*FQNLPR
Trigger: TCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCGCCCGCAGAGCGGACTaGATGATGACGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVARRAD*MMTMAS
Trigger: GGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGC...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAGACATTTATCTTTCCAGTCGTaGTTCCTATGTCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: RRDQGHGPHVSSGDKNRHLSFQS*FLCPRQ
Trigger: CTGCCGAGGACATAGGAACCACGACTGGAAAGATAA...ATGTCTATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCCCCAGCCATGGAGCTTaGGAGTGCAGAGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSPSHGA*ECRGRT
Trigger: TGTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGG...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCAGCCCAGCCCAGCCATaGAGCTTGGGAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVSPAQP*SLGVQR
Trigger: CCTCTGCACTCCCAAGCTCCATGGCTGGGCTGGGCT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCCGGGTACTGCACCTGTaGCTCACCAGCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSRVLHL*LTSHLH
Trigger: GTGCAGGTGGCTGGTGAGCCACAGGTGCAGTACCCG...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCACCTCTTCTGCCTTGTaGGGACCACCCAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGTSSAL*GPPKPS
Trigger: AGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGT...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCGGGAACGGTGGTCTTaGTGGTCTTCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGRERWS*WSSLAL
Trigger: AAGGGCCAGAGAAGACCACCAAGACCACCGTTCCCG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCGAGGGATCAAGGGCATaGTCCTCACGTCTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGEGSRA*SSRLVR
Trigger: CCTGACGAGACGTGAGGACCATGCCCTTGATCCCTC...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCTGCCAGCAGGCCCTTaGGAGCTTGGCGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGLPAGP*ELGEVG
Trigger: TCCCACCTCGCCAAGCTCCCAAGGGCCTGCTGGCAG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCCAGGCTCAGCTTAGGTaGCTCAGAAGGCCGCCATGC +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSQAQLR*LRRPPC
Trigger: GCATGGCGGCCTTCTGAGTCACCTAAGCTGAGCCTG...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCATTGGCCTCCAAGCCTaGGGCAGGAAAGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSIGLQA*GRKALS
Trigger: GGAGAGGGCTTTCCTGCCTCAGGCTTGGAGGCCAAT...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCGTCTGGTGGGTGATGTaGACCAAGGGACACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSVWWVM*TKGHPG
Trigger: CCCTGGGTGTCCCTTGGTTCACATCACCCACCAGAC...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATTCAGACAGTCAGGAGTaGCGCCGGGGACGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYSDSQE*RRGRQS
Trigger: GGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGA...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCTTGCTCGCAGTGCCTaGTGCTGGGAGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGLARSA*CWEWEL
Trigger: CAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATACAGCGGGGTGTGTCTaGCTGGCCTGCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYTAGCV*LACWAE
Trigger: CTCAGCCCAGCAGGCCAGGCAGACACACCCCGCTGT...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCTCCCCCAGCGAATGTaGAGGTGTCTCACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSLPQRM*RCLTFS
Trigger: TGAGAAAGTGAGACACCTGCACATTCGCTGGGGGAG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCTTCTCTTCCCCTCCTaGCTAAGTCCCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGLLFPS*LSPRRA
Trigger: GGCCCTGCGGGGACTTAGGCAGGAGGGGAAGAGAAG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCGACTTGCCCAGAGGCTaGACGCCTCTCTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSDLPRG*TPLWHH
Trigger: GTGATGCCAGAGAGGCGTGCAGCCTCTGGGCAAGTC...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCAATCCGTGCCGCGGCTaGGATCCAGGAGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVNPCRG*DPGAAL
Trigger: TAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGGCACAGGAGAGCTCTaGTCTGGGAGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYGTGEL*SGRPGT
Trigger: CGTGCCAGGCCTCCCAGACCAGAGCTCTCCTGTGCC...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTCACTACAGGGCTCCCTaGCATCTGCGAGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGHYRAP*HLRVHG
Trigger: GCCGTGAACTCGCAGATGCCAGGGAGCCCTGTAGTG...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCACGGTCAAGGTCGTaGGCAGGCGGCAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSRSRS*AGGKVL
Trigger: CAGCACCTTGCCGCCTGCCCACGACCTTGACCGTGA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTTTATGTATGGAACATTaGCCTCCAAGCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NAAKLCCAYLGGSELGWALCMEH*PPSLRQ
Trigger: CTGCCTCAGGCTTGGAGGCCAATGTTCCATACATAA...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCGGAGGCCTCTCCGCTTaGTACTGTCTCCATGGAACA +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGGGLSA*YCLHGT
Trigger: TGTTCCATGGAGACAGTACCAAGCGGAGAGGCCTCC...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGCCTTGAGAAATAGCTaGCTCGGACCCATGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGALRNS*LGPMAG
Trigger: CCCCGCCATGGGTCCGAGCCAGCTATTTCTCAAGGC...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGGGTGGCCCCATCCCTaGGTGACTGGGAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLGWPHP*VTGREQ
Trigger: CTGTTCTCTCCCAGTCACTCAGGGATGGGGCCACCC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCTCAGCTCAACAGACGTaGCTGCTGTCAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGSAQQT*LLSTQW
Trigger: CCACTGTGTTGACAGCAGTCACGTCTGTTGAGCTGA...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTCAGAGGCATGCTCCCTaGCGTCCTGAGGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLQRHAP*RPEGPP
Trigger: TGGAGGTCCCTCAGGACGGCAGGGAGCATGCCTCTG...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTCCCACTCCACCAGCTTaGTGCTCCCATGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLPTPPA*CSHGSA
Trigger: GGCTGAGCCATGGGAGCAGCAAGCTGGTGGAGTGGG...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTCACTCACCCCAGGCCTaGGGGAACGGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLHSPQA*GNGGLG
Trigger: ACCAAGACCACCGTTCCCGCAGGCCTGGGGTGAGTG...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATTTTATTCCTCAAAAATaGAGCCAAGCTTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNFIPQK*SQALLC
Trigger: GCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAA...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTCTGGGTCAGACTTCCTaGCTTTGCGGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGLGQTS*LCGSQP
Trigger: TGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAG...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTAATCCGTGCCGCGGCTaGGATCCAGGAGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGNPCRG*DPGAAL
Trigger: TAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATT...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTGTCTTGGAGATGGTTaGGGAGGTGCTCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSCLGDG*GGAQHA
Trigger: CGCGTGCTGAGCACCTCCCCAACCATCTCCAAGACA...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTGCAGACACCAGGCCTaGGCTGTGCAGGGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGCRHQA*AVQGSR
Trigger: TCTAGACCCCTGCACAGCCCAGGCCTGGTGTCTGCA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGCGGGTCCTGCACTTTaGGTGGCCCCATCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYAGPAL*VAPSLS
Trigger: ACTCAGGGATGGGGCCACCCAAAGTGCAGGACCCGC...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCACCTCTTCTGCCTTGTaGGGACCACCCAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVTSSAL*GPPKPS
Trigger: AGAGGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCGTGCTTACCCAGCCGTaGTCTGTACCAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLVLTQP*SVPDRV
Trigger: TACCCTGTCTGGTACAGACCACGGCTGGGTAAGCAC...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCGGAATCATCGGAGTTaGCGTCATCCCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVRNHRS*RHPQVE
Trigger: CTCTACCTGGGGATGACGTCAACTCCGATGATTCCG...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCTGGTGGGTGATGTaGACCAAGGGACACCCAGGG +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYVWWVM*TKGHPG
Trigger: CCCTGGGTGTCCCTTGGTTCACATCACCCACCAGAC...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCAGACTTCCTGGCTTTaGGGTTCCCAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVQTSWL*GSQPQL
Trigger: AAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTG...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATC +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSIGPFL*QSPNKI
Trigger: GATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGAT...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTAGATGGTTGGGGAGGTaGTCAGCACGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLRWLGR*SARGPG
Trigger: ACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCT...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCAGCAGCCGGGGCTTaGTCCACTCCACATAACCCT +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSAAGA*STPHNP
Trigger: AGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGTCCCAGACACCAGATaGAACACGCCCCACCACGAG +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLVPDTR*NTPHHE
Trigger: CTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGAC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTACAAGTGGGAGCAGCTaGCACAAGAGAACGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGTSGSS*HKRTEG
Trigger: ACCCTCCGTTCTCTTGTGGCAGCTGCTCCCACTTGT...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGACTTGCCCAGAGGCTaGACGCCTCTCTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLDLPRG*TPLWHH
Trigger: GTGATGCCAGAGAGGCGTGCAGCCTCTGGGCAAGTC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCTTCCGTGAGCTCCTaGACACTCCGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSSVSS*TLRDKL
Trigger: GAGCTTGTCCCGGAGTGTCCAGGAGCTCACGGAAGA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTGTCTTGGAGATGGTTaGGGAGGTGCTCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGCLGDG*GGAQHA
Trigger: CGCGTGCTGAGCACCTCCCCAACCATCTCCAAGACA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCCTGTGTCTTGGAGATaGTTGGGGAGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVPVSWR*LGRCSA
Trigger: TGCTGAGCACCTCCCCAACCATCTCCAAGACACAGG...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGGGGATGCGAGCCGCTaGCCCTCCCCAGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLGDASR*PSPENK
Trigger: TTTATTCTCTGGGGAGGGCCAGCGGCTCGCATCCCC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGCATGGTGTCGGCGCTaGTTGCGGATAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLAWCRR*LRIAAP
Trigger: AGGAGCTGCTATCCGCAACCAGCGCCGACACCATGC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCGCTTTCGAGGTGGACTaGCTCCTAGGACCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVAFEVD*LLGPEA
Trigger: AGCTTCAGGTCCTAGGAGCCAGTCCACCTCGAAAGC...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTCAGCGAGCTTCAAGATaGATGCTGGCTTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAQRASR*MLAFKR
Trigger: TCTTTTAAAAGCCAGCATCCATCTTGAAGCTCGCTG...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTAGCTCACCTTTCCCATaGCTAGGCCCTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSSPFP*LGPVHS
Trigger: GCTGTGGACAGGGCCTAGCCATGGGAAAGGTGAGCT...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCATGAGCAGGACACGCTaGGGAGACAGCGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVMSRTR*GDSVLQ
Trigger: TTGTAGGACGCTGTCTCCCCAGCGTGTCCTGCTCAT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGGCCTGCGGGAACGGTaGTCTTGGTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLGLRER*SWWSSL
Trigger: CAGAGAAGACCACCAAGACCACCGTTCCCGCAGGCC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCGTGGCCTCTTCACTCTaGAGGTGTCTGTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVVASSL*RCLSDS
Trigger: ACTGTCTGACAGACACCTTCAGAGTGAAGAGGCCAC...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCCTGAAGACACTGGCTTaGGAATGCATTGCCATTTAC +
Preference number: 4 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSLKTLA*ECIAIY
Trigger: GTAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAG...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATCTGGGATCCAGGAGCTaGTCTATCTGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYLGSRS*SICRSF
Trigger: GAAGGACCGGCAGATAGAGCAGCTCCTGGATCCCAG...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCATCGGGCCTTTTCTCTaGCAGAGTCCGAACAAAATC +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGIGPFL*QSPNKI
Trigger: GATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGAT...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCTGCCGTCCTTCTCCTTaGACTGCTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVCRPSP*TAVPAS
Trigger: TGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCA...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTTTCGCCTGCAGGAGCTaGTTCACCTCCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGFACRS*FTSKSL
Trigger: GAGAGATTTGGAGGTGAAGCAGCTCCTGCAGGCGAA...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTCCCTTCCACCTCTTCTaGCTTGTGGGGACCACCCAA +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLPFHLF*LVGTTQ
Trigger: TTGGGTGGTCCCCACAAGGCAGAAGAGGTGGAAGGG...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACTTTATTCCTCAAAAATaGAGCCAAGCTTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHFIPQK*SQALLC
Trigger: GCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAA...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCGTCTTCATATCGGTCTaGAGTTTGCTGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLVFISV*SLLMVP
Trigger: CGGCACCATCAGCAAACTCCAGACCGATATGAAGAC...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTCCTTCAGGCTCTaGTTCTCTTCCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSSFRL*FSSVSS
Trigger: GGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCACCAGCACTGGACACTaGGCATCAGCTGAAGACACT +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVTSTGH*ASAEDT
Trigger: AGTGTCTTCAGCTGATGCCCAGTGTCCAGTGCTGGT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTATGAGCAGGACACGCTaGGGAGACAGCGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGMSRTR*GDSVLQ
Trigger: TTGTAGGACGCTGTCTCCCCAGCGTGTCCTGCTCAT...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCAAGGAAGGGGGTTTCTaGTCCATCGGAGGGATCAAG +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVKEGGF*SIGGIK
Trigger: CTTGATCCCTCCGATGGACCAGAAACCCCCTTCCTT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
3UTR CAA 72 bp ACAGTTTCACATTTCAGCTTCCAGACGTCATTTCTGTaGCTTTTAAGGGTGCTTACCCAGCCGTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: TVSHFSFQTSFL*LLRVLTQPWSV
Trigger: TACAGACCACGGCTGGGTAAGCACCCTTAAAAGCAACAGAAATGACGTCTGGAAGCTGAAATGTGAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCTTGCTGGTAAGTGTCTaGATCTCCTCTCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGLLVSV*ISSLKT
Trigger: GGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAA...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTAGGAGCTGCTCTATCTaGCGGTCCTTCCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGRSCSI*RSFLLF
Trigger: AAACAGCAGGAAGGACCGGCAGATAGAGCAGCTCCT...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATCTGCCCATCTTCTTCTaGCTTTTGGCGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYLPIFF*LLAPVF
Trigger: GAAGACGGGCGCCAAAAGGCAGAAGAAGATGGGCAG...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATACCTCCAAATCTCTCTaGAGCAGCTGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYTSKSL*SSCSCS
Trigger: GCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGT...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTTCGCCTGCAGGAGCTaGTTCACCTCCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGFACRS*FTSKSL
Trigger: GAGAGATTTGGAGGTGAAGCAGCTCCTGCAGGCGAA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCGTAGTATGTCTCCATaGCGATCCGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVRSMSP*RSASLP
Trigger: TGGAAGAGATGCGGATCGCCATGGAGACATACTACG...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCCGTAGTATGTCTCCATaGCGATCCGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSRSMSP*RSASLP
Trigger: TGGAAGAGATGCGGATCGCCATGGAGACATACTACG...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTCGTAGTATGTCTCCATaGCGATCCGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGRSMSP*RSASLP
Trigger: TGGAAGAGATGCGGATCGCCATGGAGACATACTACG...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGAGTTTAGCCCTGCTTaGCTCTGCCCGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLEFSPA*LCPLVS
Trigger: TGAGACTAGCGGGCAGAGCCAAGCAGGGCTAAACTC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TTCTGCACGTGCAATGACTTCTTTAACTCAATAATCTCGTCATACATATCTTCTCGGAATCATCGGAGTTaGCGTCATCCCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FCTCNDFFNSIISSYISSRNHRS*RHPQVE
Trigger: CTCTACCTGGGGATGACGTCAACTCCGATGATTCCG...AGAAGATATGTATGACGAGATTATTGAGTTAAAGAAGTCATTGCACGTGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSFRIL*FSPLMT
Trigger: GGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCT...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTGTCTTCATATCGGTCTaGAGTTTGCTGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGVFISV*SLLMVP
Trigger: CGGCACCATCAGCAAACTCCAGACCGATATGAAGAC...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCGTAGTATGTCTCCATaGCGATCCGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGRSMSP*RSASLP
Trigger: TGGAAGAGATGCGGATCGCCATGGAGACATACTACG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTTTATCTTTCCAGTCGTaGTTCCTATGTCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGLSFQS*FLCPRQ
Trigger: CTGCCGAGGACATAGGAACCACGACTGGAAAGATAA...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATTCTTTAGCTCCTCACTaGCTTGGGACAGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYSLAPH*LGTGRV
Trigger: AACACGGCCTGTCCCAAGCCAGTGAGGAGCTAAAGA...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTGATCATTTGGGGACCTaGGTGTCTTTAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGDHLGT*VSLAPH
Trigger: GTGAGGAGCTAAAGACACCCAGGTCCCCAAATGATC...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATTGTGTGTCAACTCCCTaGTCCTCAGAGAATCCGAGC +
Preference number: 4 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYCVSTP*SSENPS
Trigger: GCTCGGATTCTCTGAGGACCAGGGAGTTGACACACA...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCATCTCATTCAGATCTTaGAGGTTATCGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGISFRS*RLSVLS
Trigger: AGAAAGCACCGATAACCTTCAAGATCTGAATGAGAT...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTGAACAGACATCACCCTaGTGTTCTCAGAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGEQTSP*CSQKQV
Trigger: CACTTGCTTCTGAGAACAGCAGGGTGATGTCTGTTC...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCAATGCAGCCAAGCTTTaGTGTGCTTATCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVNAAKL*CAYLGG
Trigger: TCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCCAAAGGAGGAATTTTaGAATCGTTTAGACGGGTTA +
Preference number: 4 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGPKEEF*NRLDGL
Trigger: TAACCCGTCTAAACGATTGCAAAATTCCTCCTTTGG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGATCATTTGGGGACCTaGGTGTCTTTAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLDHLGT*VSLAPH
Trigger: GTGAGGAGCTAAAGACACCCAGGTCCCCAAATGATC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR TCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCTGAAGACACTGGCTTaGGAATGCATTGCCATTTAC +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGLKTLA*ECIAIY
Trigger: GTAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCGCTCTTCTGCACGTaGAATGACTTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGSLFCT*NDFFNS
Trigger: TGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CCA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTCTTCAAGATGGATGCTaGCTTTTAAAAGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLLQDGC*LLKEQP
Trigger: GGGCTGCTCTTTTAAAAGCCAGCATCCATCTTGAAG...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGTTATCGGTGCTTTCTaGAGGTTTTTATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGVIGAF*RFLFLK
Trigger: TTTGAGGAATAAAAACCTGCAGAAAGCACCGATAAC...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR GCA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTCCAAAGGAGGAATTTTaGAATCGTTTAGACGGGTTA +
Preference number: 4 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGPKEEF*NRLDGL
Trigger: TAACCCGTCTAAACGATTGCAAAATTCCTCCTTTGG...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS GCA 90 bp GCCCGCAGCCTCGGGGCCTTCCCTGGCGCCGGCCCGCGACCCCGCTaGCATGGCAACCAGGCCGCCGACCTACCCAGCCGGGTAAGCGAC +
Preference number: 5 (lower is better)
Translates to: ARSLGAFPGAGPRPR*HGNQAADLPSRVSD
Trigger: GTCGCTTACCCGGCTGGGTAGGTCGGCGGCCTGGTTGCCATGGCAGCGGGGTCGCGGGCCGGCGCCAGGGAAGGCCCCGAGGCTGCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS GCA 90 bp TGCCCAGGAACATGGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTTaGTGGCTCGGGCGTCCGGGTCTGGGAATCCGCGGGCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CPGTWWRRCPAAPQG*WLGRPGLGIRGQPW
Trigger: CCAGGGCTGCCCGCGGATTCCCAGACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000623361.3
CDS CCA 90 bp GGTGACTCGTGTCCAAGGCCGGCTCCCCGGTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGCTGGCTCGGGCGT +
Preference number: 5 (lower is better)
Translates to: GDSCPRPAPRCPGTW*RRCPAAPQGCWLGR
Trigger: ACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGAGTCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325997.13
ENST00000623361.3
CDS CCA 90 bp CATCTCCCGTGTCCAAGGCCGGCTCCCCGGTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGCTGGCTCGGGCGT +
Preference number: 5 (lower is better)
Translates to: HLPCPRPAPRCPGTW*RRCPAAPQGCWLGR
Trigger: ACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGGGAGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS CCA 90 bp TGTCATCTCCCGTGTCCAAGGCCGGCTCCCCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGCTGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: CHLPCPRPAPRCPGT*WRRCPAAPQGCWLG
Trigger: CCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGGGAGATGACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS CCA 90 bp GATAAAGGCCCTGGCCCAGGTCTTCCGCACGACCCTGCCGCCTCCTaGCCGACGCGCCGCTCCTGCGTGGCCTTGCGTGCCCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: DKGPGPGLPHDPAAS*PTRRSCVALRALPP
Trigger: AGGAGGCAGGGCACGCAAGGCCACGCAGGAGCGGCGCGTCGGCCAGGAGGCGGCAGGGTCGTGCGGAAGACCTGGGCCAGGGCCTTTATC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423196.1
CDS CCA 90 bp TTGCTTTCGTGTCCAAGGCCGGCTCCCCGGTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGCTGGCTCGGGCGT +
Preference number: 5 (lower is better)
Translates to: LLSCPRPAPRCPGTW*RRCPAAPQGCWLGR
Trigger: ACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGAAAGCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438376.6
CDS GCA 90 bp CTGCAGACAGACTGTCATCTCCCGTGTCCAAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LQTDCHLPCPRPAPR*PGTWWRRCPAAPQG
Trigger: ACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGGGAGATGACAGTCTGTCTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS GCA 90 bp GACTCACAGGGAGCAGCCCGGGTCGCCCCGGGGAGCCTCACCTTGTaGTTGTACACCTTCCACTGGGCCTGCAGGACTCTGGCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: DSQGAARVAPGSLTL*LYTFHWACRTLAAA
Trigger: CGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGCTCCCCGGGGCGACCCGGGCTGCTCCCTGTGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS GCA 90 bp GCCTGGGTCAGACTTCCTGGCTTTGCGGTTCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGGCCGCCCAGAGGCATGCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: AWVRLPGFAVPSHSF*GVRDARPPRGMLPA
Trigger: GGCAGGGAGCATGCCTCTGGGCGGCCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000325979.11
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000422276.3
ENST00000423395.5
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000611775.4
ENST00000623361.3
CDS GCA 90 bp GCCCCGGGGAGCCTCACCTTGTGCTTGTACACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCGTCTCTTCTCCCATCAGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: APGSLTLCLYTFHWA*RTLAAASLLPSEQG
Trigger: CCCCTGCTCTGATGGGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGCTCCCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS CCA 90 bp GCCTCACCTTGTGCTTGTACACCTTCCACTGGGCCTGCAGGACTCTaGCCGCGGCGTCTCTTCTCCCATCAGAGCAGGGGGAGCGGGGCC +
Preference number: 5 (lower is better)
Translates to: ASPCACTPSTGPAGL*PRRLFSHQSRGSGA
Trigger: GGCCCCGCTCCCCCTGCTCTGATGGGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS CCA 90 bp CGGGTCGCCCCGGGGAGCCTCACCTTGTGCTTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCCGCGGCGTCTCTTCTCCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: RVAPGSLTLCLYTFH*ACRTLAAASLLPSE
Trigger: CTCTGATGGGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGCTCCCCGGGGCGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS-3UTR CAA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGCGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATRSWSL*RSPRGC
Trigger: ACAGCCACGAGGGGACCGCAACAAGGACCACGAGCG...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWRSWSL*RSPRGC
Trigger: ACAGCCACGAGGGGACCGCAACAAGGACCACGAGCG...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAATCCGGCGGCCAGTCTaGCTCGCAGTGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRIRRPV*LAVPAA
Trigger: AGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGAT...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTGCCCAGCCATGGAGCTaGGGAGTGCAGAGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPAQPWS*GVQRPH
Trigger: GTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGC...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGRRSWS*LRSPRG
Trigger: GCCACGAGGGGACCGCAACAAGGACCACGAGCGTCT...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGRRSWS*LRSPRG
Trigger: GCCACGAGGGGACCGCAACAAGGACCACGAGCGTCT...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGATCCGGCGGCCAGTCTaGCTCGCAGTGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGIRRPV*LAVPAA
Trigger: AGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGAT...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TCCTGCACAGGGCTGCCCGTGGCCTGGGCGATGGGGCTCGGAACGCGGGGCACATCGGAATCATCGGAGTaGACGTCATCCCCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: SCTGLPVAWAMGLGTRGTSESSE*TSSPGR
Trigger: TCTACCTGGGGATGACGTCAACTCCGATGATTCCGA...TGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGGCGGGTCCTGCACTTaGGGTGGCCCCATCCCTGAG +
Preference number: 5 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYGGSCT*GGPIPE
Trigger: CTCAGGGATGGGGCCACCCAAAGTGCAGGACCCGCC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTGCCCACTCCACCAGCTaGCTGCTCCCATGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPAHSTS*LLPWLS
Trigger: GCTGAGCCATGGGAGCAGCAAGCTGGTGGAGTGGGC...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACACTGCCAGCAGGCCCTaGGGAGCTTGGCGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDTASRP*GAWRGG
Trigger: CCCACCTCGCCAAGCTCCCAAGGGCCTGCTGGCAGT...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFRRSWS*LRSPRG
Trigger: GCCACGAGGGGACCGCAACAAGGACCACGAGCGTCT...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGRRSWS*LRSPRG
Trigger: GCCACGAGGGGACCGCAACAAGGACCACGAGCGTCT...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGATCCGGCGGCCAGTCTaGCTCGCAGTGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVIRRPV*LAVPAA
Trigger: AGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGAT...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGATCCGGCGGCCAGTCTaGCTCGCAGTGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SAIPGTKDKLGQGGALLWIRRPV*LAVPAA
Trigger: AGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGAT...CCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTAGCCTATGCTGTCCCTaGGAACGGCGAGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPSLCCP*ERRACL
Trigger: GAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGCT...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCGCGGGAACGGTGGTCTaGGTGGTCTTCTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSAGTVV*VVFSGP
Trigger: AGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGC...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GAGGGGGCATGGTGTCGGCGCTGGTTGCGGATAGCAGCTCCTCACGGTCAAGGTACACCGGGCCCTGGGTaGGAGTTTAGCCCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: EGAWCRRWLRIAAPHGQGTPGPG*EFSPAW
Trigger: CCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTGT...ACCTTGACCGTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCATGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAGGAGGTGGCCACTCTTaGGCTGAGACCTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRGGGHS*AETSAD
Trigger: GTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTCC...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS CCA 90 bp CGGCGGCCAGTCTTGCTCGCAGTGCCTGCTGCTGGGAGTGGGAGCTaGGAGCTCTTGGGCCTCACCTCGCCCTCTCCTTCTCATGATAAA +
Preference number: 5 (lower is better)
Translates to: RRPVLLAVPAAGSGS*ELLGLTSPSPSHDK
Trigger: TTTATCATGAGAAGGAGAGGGCGAGGTGAGGCCCAAGAGCTCCCAGCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423196.1
CDS CCA 90 bp CTTCCGTCCCGACACAGCCCGGGCTTCCTGGAGGTGGCCACTCTTTaGCTGAGACCTCAGCAGACCAGCTGCCCTGGTGCCAGAATCCAA +
Preference number: 5 (lower is better)
Translates to: LPSRHSPGFLEVATL*LRPQQTSCPGARIQ
Trigger: TTGGATTCTGGCACCAGGGCAGCTGGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTCCAGGAAGCCCGGGCTGTGTCGGGACGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRRSWSL*RSPRGC
Trigger: ACAGCCACGAGGGGACCGCAACAAGGACCACGAGCG...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TTCTTCTCCAGCTCCACAATGCGCCTCAGCAGCCGGGGCTTGCTCCACTCCACAAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: FFSSSTMRLSSRGLLHSTRRSWS*LRSPRG
Trigger: GCCACGAGGGGACCGCAACAAGGACCACGAGCGTCT...TGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGGGGAGCTGGGAGCTCTaGGGCCTTATGAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWGSWEL*GLMRNF
Trigger: GAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTGGGAGCTGGGAGCTCTaGGGCCTTATGAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFGSWEL*GLMRNF
Trigger: GAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCTCCCGCCACCAGCTaGGGAACAGACATCACCCTG +
Preference number: 5 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHAPATS*GTDITL
Trigger: CAGGGTGATGTCTGTTCCCAAGCTGGTGGCGGGAGC...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACGGCGGGTCCTGCACTTaGGGTGGCCCCATCCCTGAG +
Preference number: 5 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHGGSCT*GGPIPE
Trigger: CTCAGGGATGGGGCCACCCAAAGTGCAGGACCCGCC...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGCCCACTCCACCAGCTaGCTGCTCCCATGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEAHSTS*LLPWLS
Trigger: GCTGAGCCATGGGAGCAGCAAGCTGGTGGAGTGGGC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTCGTCTCCCCCGGGAGTaGTCTACTTTCCTAGGCCCT +
Preference number: 5 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPRLPRE*STFLGP
Trigger: AGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACG...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAAGCCCTCTCCCGACTaGCCCAGAGGCTGCACGCCT +
Preference number: 5 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEKPSPD*PRGCTP
Trigger: AGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCTT...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTCAGACTTCCTGGCTTaGCGGTTCCCAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: AIPGTKDKLGQGGALLWASDFLA*RFPATA
Trigger: AGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGA...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCAGACGCTCGTGGTCCTaGTTGCGGTCCCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: SLLRLPRELSTFLGPASSRRSWS*LRSPRG
Trigger: GCCACGAGGGGACCGCAACAAGGACCACGAGCGTCT...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGGGAGCTGGGAGCTCTaGGGCCTTATGAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGGSWEL*GLMRNF
Trigger: GAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAACACCGGGCCCTGGGTaGGAGTTTAGCCCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRTPGPG*EFSPAW
Trigger: CCAAGCAGGGCTAAACTCCAACCCAGGGCCCGGTGT...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS CCA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTaGCATAAGGCGACGCTTAGTTCAGAGGCAGCTCCAGATGGGACA +
Preference number: 5 (lower is better)
Translates to: QRTSWAKAGPCCGPS*HKATLSSEAAPDGT
Trigger: TGTCCCATCTGGAGCTGCCTCTGAACTAAGCGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGATATCGGTCTGGAGTTaGCTGATGGTGCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLISVWS*LMVPSF
Trigger: GAAGGACGGCACCATCAGCAAACTCCAGACCGATAT...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGAATCTTCTTCTGCCTTTaGGCGCCCGTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GQAGPRRGPVVGLPGIRRIFFCL*APVFFS
Trigger: GGAGAAGAAGACGGGCGCCAAAAGGCAGAAGAAGAT...TCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp TCTTGTGCTTGTACACCTTCCACTGGGCCTGCAGGACTCTGGCCGCGGCGTCTCGGGAGCTGGGAGCTCTaGGGCCTTATGAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: SCACTPSTGPAGLWPRRLGSWEL*GLMRNF
Trigger: GAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC...GAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp CACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCGTCATCCGGCGGCCAGTCTaGCTCGCAGTGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: HLTLGQESLSWGLTLYFVIRRPV*LAVPAA
Trigger: AGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGAT...GACGAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACTGGTGTCGGCGCTGGTaGCGGATAGCAGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHWCRRW*RIAAPH
Trigger: GTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCA...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACGGGACAGGCCGTGTTTaGCTGTGGGGATGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHGTGRV*LWGWGK
Trigger: CTTCCCCCATCCCCACAGCAAAACACGGCCTGTCCC...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATCTAAGGCTCTTCCTCTaGACGCCCCAGCAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYLRLFL*TPQQGL
Trigger: TAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAG...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATAGGAGGCCTCTCCGCTaGGTACTGTCTCCATGGAAC +
Preference number: 5 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYRRPLR*VLSPWN
Trigger: GTTCCATGGAGACAGTACCAAGCGGAGAGGCCTCCT...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGGGCGAGGTGGGAGCCTaGAGAAATAGCTGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEGEVGA*RNSWLG
Trigger: TCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGCC...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS TCA 90 bp GCTGGGAGCTCTTGGGCCCGGCATGGTGCGGCTGCGCTTATCAGGTaGGTCTCACTAATGTGGAGGAGAGAGCTGTTCCACACTGGTCTG +
Preference number: 5 (lower is better)
Translates to: AGSSWARHGAAALIR*VSLMWRRELFHTGL
Trigger: CAGACCAGTGTGGAACAGCTCTCTCCTCCACATTAGTGAGACTCACCTGATAAGCGCAGCCGCACCATGCCGGGCCCAAGAGCTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS-3UTR CAA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCATATCGGTCTGGAGTTaGCTGATGGTGCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: AIPGTKDKLGQGGALLWAISVWS*LMVPSF
Trigger: GAAGGACGGCACCATCAGCAAACTCCAGACCGATAT...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGCGCATCTCTTCCAGGTaGGTAGTCTTCATATCGGTC +
Preference number: 5 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLRISSR*VVFISV
Trigger: GACCGATATGAAGACTACCAACCTGGAAGAGATGCG...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCATCTTCTTCTGCCTTTaGGCGCCCGTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGIFFCL*APVFFS
Trigger: GGAGAAGAAGACGGGCGCCAAAAGGCAGAAGAAGAT...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGCTGCGGCGTGTGATTTaGAGCTCTCCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: PGTKDKLGQGGALLWAFLLRRVI*SSPSHL
Trigger: TAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAG...CAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp ACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGGCGACGCTGCGGCGTGTGATTTaGAGCTCTCCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: TSWAKAGPCCGPSWHKATLRRVI*SSPSHL
Trigger: TAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAG...CGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGAGAGATAAGGTGACTTaGGCGATGTGGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWRDKVT*AMWVEV
Trigger: AACCTCCACCCACATCGCCAAAGTCACCTTATCTCT...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGTCGAGCAAATCCTGGTaGTTGAGGGTGTCACCAGGA +
Preference number: 5 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGSSKSW*LRVSPG
Trigger: TCCTGGTGACACCCTCAACAACCAGGATTTGCTCGA...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCTAAGGCTCTTCCTCTaGACGCCCCAGCAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVELRLFL*TPQQGL
Trigger: TAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CAGAGGCCGCACACATGGGGTGACGGGGACTGTCCCAGACACCAGATGCAACACCTAGGACCTGAAGCTTaGAGCTGGCAAGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: QRPHTWGDGDCPRHQMQHLGPEA*SWQAGM
Trigger: CATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAG...GTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACCCCATGTGTGCGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGCTGCCTGGATTCAGTTaGGTAATCGTCGGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGLPGFS*VIVGSL
Trigger: CAGACTGCCGACGATTACCAAACTGAATCCAGGCAG...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AGTGGAGACAGGGGCCAGGCTTCGAACCGCAGGGTGGGGCGGGTCCTGCACTTTAAAGAAAAAGCTACTTaGTCCAACACCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SGDRGQASNRRVGRVLHFKEKAT*SNTGPW
Trigger: CCAGGGCCCGGTGTTGGACAAAGTAGCTTTTTCTTT...AAAGTGCAGGACCCGCCCCACCCTGCGGTTCGAAGCCTGGCCCCTGTCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTGACCCATGGCGGGGTTaGTGTGTCAACTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LCQESLLYLQGCPWSPPADPWRG*CVNSLV
Trigger: GACCAGGGAGTTGACACACAAACCCCGCCATGGGTC...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGATCTTCTTCTGCCTTTaGGCGCCCGTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTIFFCL*APVFFS
Trigger: GGAGAAGAAGACGGGCGCCAAAAGGCAGAAGAAGAT...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGCTGCGGCGTGTGATTTaGAGCTCTCCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGLRRVI*SSPSHL
Trigger: TAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAG...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp GCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCAGAGATAAGGTGACTTaGGCGATGTGGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: AIPGTKDKLGQGGALLWARDKVT*AMWVEV
Trigger: AACCTCCACCCACATCGCCAAAGTCACCTTATCTCT...GGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTGGCTTGAGAATGCATaGCCATTTACCCAGCGAGCT +
Preference number: 5 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGWLENA*PFTQRA
Trigger: AGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCCA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGCAGGAGTCCCTTTCTaGGGGACTCACTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYAGVPF*GTHSLL
Trigger: AAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGAGAGCAGGAGGTGGCCACTCTTaGGCTGAGACCTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: RNAGLKEEATSVLLELRAGGGHS*AETSAD
Trigger: GTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTCC...TGCTCTCAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp AACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGTCAGACTTCCTGGCTTaGCGGTTCCCAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: NRRNAGLKEEATSVLLELSDFLA*RFPATA
Trigger: AGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGA...CAGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GCCTCAGCAGCCGGGGCTTGCTCCACTCCACATAACCCTGTGTCTTGGAGATGGATATCGGTCTGGAGTTaGCTGATGGTGCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ASAAGACSTPHNPVSWRWISVWS*LMVPSF
Trigger: GAAGGACGGCACCATCAGCAAACTCCAGACCGATAT...CCATCTCCAAGACACAGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGAATATCGGTCTGGAGTTaGCTGATGGTGCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRISVWS*LMVPSF
Trigger: GAAGGACGGCACCATCAGCAAACTCCAGACCGATAT...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp CAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGCATAAGCGCATCTCTTCCAGGTaGGTAGTCTTCATATCGGTC +
Preference number: 5 (lower is better)
Translates to: QRTSWAKAGPCCGPSWHKRISSR*VVFISV
Trigger: GACCGATATGAAGACTACCAACCTGGAAGAGATGCG...CTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGCGCATCTCTTCCAGGTaGGTAGTCTTCATATCGGTC +
Preference number: 5 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVRISSR*VVFISV
Trigger: GACCGATATGAAGACTACCAACCTGGAAGAGATGCG...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACATCCGGCGGCCAGTCTaGCTCGCAGTGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHIRRPV*LAVPAA
Trigger: AGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGAT...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCTCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: GNSRHKGQAGPRRGPVVGSEPCA*LAKSFV
Trigger: GACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGA...GCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACAGCAAATCCTGGTTGTaGAGGGTGTCACCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDSKSWL*RVSPGR
Trigger: TCTTCCTGGTGACACCCTCAACAACCAGGATTTGCT...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGTTTATGTATGGAACATaGGCCTCCAAGCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: VVPMSSAALPSRRGDSDGFMYGT*ASKPEA
Trigger: TGCCTCAGGCTTGGAGGCCAATGTTCCATACATAAA...CCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCCCAGGGGTTAAGCCTGTCCCCGTGGACGGAAGCCTTGGGAGAAGCTGTCAGCTGCGACCAGCGTCGTTaGGCTATTTTAGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AQGLSLSPWTEALGEAVSCDQRR*AILVSS
Trigger: AGAAGAGACTAAAATAGCCAAACGACGCTGGTCGCA...GCTGACAGCTTCTCCCAAGGCTTCCGTCCACGGGGACAGGCTTAACCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS GCA 90 bp GTGCAGACGTGCTTCTCATTAAACTCCCTTAACTCTGTCTGGCAGTaGCTCCTGGGAGGGAGAGAGGACGCTTCTTCACACGGCCGTCAC +
Preference number: 5 (lower is better)
Translates to: VQTCFSLNSLNSVWQ*LLGGREDASSHGRH
Trigger: GTGACGGCCGTGTGAAGAAGCGTCCTCTCTCCCTCCCAGGAGGCACTGCCAGACAGAGTTAAGGGAGTTTAATGAGAAGCACGTCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS-3UTR CAA 90 bp TCGGGCCTTTTCTCTGCCAGAGTCCGAACAAAATCCGTGCCGCGGCTGGGATCCCGCATCTCTTCCAGGTaGGTAGTCTTCATATCGGTC +
Preference number: 5 (lower is better)
Translates to: SGLFSARVRTKSVPRLGSRISSR*VVFISV
Trigger: GACCGATATGAAGACTACCAACCTGGAAGAGATGCG...GGATCCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp AAGGCCCGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCCGCATCTCTTCCAGGTaGGTAGTCTTCATATCGGTC +
Preference number: 5 (lower is better)
Translates to: KARPGLRLFLLTPQQGLIRISSR*VVFISV
Trigger: GACCGATATGAAGACTACCAACCTGGAAGAGATGCG...GATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACCGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHRSWSL*RSPRGC
Trigger: ACAGCCACGAGGGGACCGCAACAAGGACCACGAGCG...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGGGAGCTGGGAGCTCTaGGGCCTTATGAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGAGSWEL*GLMRNF
Trigger: GAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CAGCAAGGACCTCGGCAATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGTCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: QQGPRQFQAQRTSWAKAGSEPCA*LAKSFV
Trigger: GACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGA...CCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAATTGCCGAGGTCCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACTCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDSEPCA*LAKSFV
Trigger: GACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGA...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp AATCCACCATCCGAGCTGCAGCTGGAGATGAGGGGGATGCGAGCCGCTGGCCCTGGAAAGCTTTCCTTTTaGCTTTCGTCTCCACATCAG +
Preference number: 5 (lower is better)
Translates to: NPPSELQLEMRGMRAAGPGKLSF*LSSPHQ
Trigger: CTGATGTGGAGACGAAAGCAAAAAGGAAAGCTTTCC...AGGGCCAGCGGCTCGCATCCCCCTCATCTCCAGCTGCAGCTCGGATGGTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402050.7
CDS-3UTR CAA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGCGGCAGATGTGTCTGTaGGCACTGAAAATCCACCAT +
Preference number: 5 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVERQMCL*ALKIHH
Trigger: ATGGTGGATTTTCAGTGCCAACAGACACATCTGCCG...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGTTTATGTATGGAACATaGGCCTCCAAGCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTFMYGT*ASKPEA
Trigger: TGCCTCAGGCTTGGAGGCCAATGTTCCATACATAAA...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGTGGCTTGAGAATGCATaGCCATTTACCCAGCGAGCT +
Preference number: 5 (lower is better)
Translates to: SFQSWFLCPRQRCHHGVEWLENA*PFTQRA
Trigger: AGCTCGCTGGGTAAATGGCAATGCATTCTCAAGCCA...CTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGGGGGCTGAAGACACTGGCTaGAGAATGCATTGCCATTTA +
Preference number: 5 (lower is better)
Translates to: WFLCPRQRCHHGVETVTGAEDTG*RMHCHL
Trigger: TAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAGC...CCCCGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGCTTTGCTGCTGTTCTaGAAGTTCAAGGTGATGTGG +
Preference number: 5 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYALLLF*KFKVMW
Trigger: CCACATCACCTTGAACTTCAAGAACAGCAGCAAAGC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS TCA 90 bp TCCACACTGGTCTGCAGACCACATGACAGCGGTCTCTTGTACTGCTaGGAGACAGCGTCTAGGCGAGCACACAAGTGCAGACGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: STLVCRPHDSGLLYC*ETASRRAHKCRRAS
Trigger: AGAAGCACGTCTGCACTTGTGTGCTCGCCTAGACGCTGTCTCTCAGCAGTACAAGAGACCGCTGTCATGTGGTCTGCAGACCAGTGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS-3UTR CAA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATTCAGACTTCCTGGCTTaGCGGTTCCCAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNSDFLA*RFPATA
Trigger: AGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGA...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCTCAGACTTCCTGGCTTaGCGGTTCCCAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGSDFLA*RFPATA
Trigger: AGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGA...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp GCCTCAGCAGCCGGGGCTTGCTCCACTCCACATAACCCTGTGTCTTGGAGATGGTCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: ASAAGACSTPHNPVSWRWSEPCA*LAKSFV
Trigger: GACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGA...CCATCTCCAAGACACAGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp CTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGATCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LSSRGSYVLGSAAITAWRSEPCA*LAKSFV
Trigger: GACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGA...TCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TGGCACTTGACGCTGGGGCAGGAGTCCCTTTCTTGGGGACTCACTCTCTACTTCTCGGAATCATCGGAGTaGACGTCATCCCCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: WHLTLGQESLSWGLTLYFSESSE*TSSPGR
Trigger: TCTACCTGGGGATGACGTCAACTCCGATGATTCCGA...GAAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGCCCCAGCGTCAAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCGGAAAGCTTTCCTTTTaGCTTTCGTCTCCACATCAG +
Preference number: 5 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFGKLSF*LSSPHQ
Trigger: CTGATGTGGAGACGAAAGCAAAAAGGAAAGCTTTCC...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476665.5
CDS-3UTR CAA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACAGCCTATGCTGTCCCTaGGAACGGCGAGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHSLCCP*ERRACL
Trigger: GAGGCAGGCTCGCCGTTCCAAGGGACAGCATAGGCT...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GGTGACGGGGACTGTCCCAGACACCAGATGCAACACGCCCCACCACGAGCCTATGCTGAAGACACTGGCTaGAGAATGCATTGCCATTTA +
Preference number: 5 (lower is better)
Translates to: GDGDCPRHQMQHAPPRAYAEDTG*RMHCHL
Trigger: TAAATGGCAATGCATTCTCAAGCCAGTGTCTTCAGC...ATAGGCTCGTGGTGGGGCGTGTTGCATCTGGTGTCTGGGACAGTCCCCGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACCAGACGTCATTTCTGTaGCTTTTAAGGGTGCTTACC +
Preference number: 5 (lower is better)
Translates to: VVVPMSSAALPSRRGDSDQTSFL*LLRVLT
Trigger: GGTAAGCACCCTTAAAAGCAACAGAAATGACGTCTG...GTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS CCA 90 bp ACACAAGTGCAGACGTGCTTCTCATTAAACTCCCTTAACTCTGTCTaGCAGTGCCTCCTGGGAGGGAGAGAGGACGCTTCTTCACACGGC +
Preference number: 5 (lower is better)
Translates to: TQVQTCFSLNSLNSV*QCLLGGREDASSHG
Trigger: GCCGTGTGAAGAAGCGTCCTCTCTCCCTCCCAGGAGGCACTGCCAGACAGAGTTAAGGGAGTTTAATGAGAAGCACGTCTGCACTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS-3UTR CAA 90 bp GGAGACGATGCACCTCCTCGTAGTATGTCTCCATGGCGATCCGCATCTCTTCCAATCTTCTTCTGCCTTTaGGCGCCCGTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GDDAPPRSMSPWRSASLPIFFCL*APVFFS
Trigger: GGAGAAGAAGACGGGCGCCAAAAGGCAGAAGAAGAT...TGGAAGAGATGCGGATCGCCATGGAGACATACTACGAGGAGGTGCATCGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp CAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTGGTTCTTTCTTCATTTCTaGCAATTCTTGGAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: QAQRTSWAKAGPCCGPSWFFLHF*QFLELA
Trigger: AGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA...CCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp GAGCAGCCCAGCTGCACCAGAGGACATGGCGGTTTATGTATGGAACATTGGCCTTCGGAATCATCGGAGTaGACGTCATCCCCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: EQPSCTRGHGGLCMEHWPSESSE*TSSPGR
Trigger: TCTACCTGGGGATGACGTCAACTCCGATGATTCCGA...AGGCCAATGTTCCATACATAAACCGCCATGTCCTCTGGTGCAGCTGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACCGTCTCCCCCGGGAGTaGTCTACTTTCCTAGGCCCT +
Preference number: 5 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHRLPRE*STFLGP
Trigger: AGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACG...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGAAAGAAAAAGCTACTTaGTCCAACACCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LSFQSWFLCPRQRCHHGVKEKAT*SNTGPW
Trigger: CCAGGGCCCGGTGTTGGACAAAGTAGCTTTTTCTTT...CACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTGACCCATGGCGGGGTTaGTGTGTCAACTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: NAAKLCCAYLGGSELGWADPWRG*CVNSLV
Trigger: GACCAGGGAGTTGACACACAAACCCCGCCATGGGTC...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS TCA 90 bp GGAAAGCTTTCCTTTTTGCTTTCGTCTCCACATCAGAGTCAAAGGTaGCTGCAGACAGACTGTCATCTCCCGTGTCCAAGGCCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GKLSFLLSSPHQSQR*LQTDCHLPCPRPAP
Trigger: GGGAGCCGGCCTTGGACACGGGAGATGACAGTCTGTCTGCAGTCACCTTTGACTCTGATGTGGAGACGAAAGCAAAAAGGAAAGCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS GCA 90 bp TTCCTGGAGGTGGCCACTCTTTGGCTGAGACCTCAGCAGACCAGCTaGCCTGGTGCCAGAATCCAAATGAATGAAATTACCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: FLEVATLWLRPQQTS*PGARIQMNEITRKS
Trigger: GCTCTTCCTGGTAATTTCATTCATTTGGATTCTGGCACCAGGGCAGCTGGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423196.1
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCGGGAACGGTGGTCTaGGTGGTCTTCTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSAGTVV*VVFSGP
Trigger: AGGGCCAGAGAAGACCACCAAGACCACCGTTCCCGC...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTCAGACGTCATTTCTGTaGCTTTTAAGGGTGCTTACC +
Preference number: 5 (lower is better)
Translates to: LCQESLLYLQGCPWSPPAQTSFL*LLRVLT
Trigger: GGTAAGCACCCTTAAAAGCAACAGAAATGACGTCTG...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AAACAGGAGAAATGCTGGCCTGAAGGAGGAAGCCACCTCGGTCCTGTTGGAGCTGGAAAGCTTTCCTTTTaGCTTTCGTGTCCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: KQEKCWPEGGSHLGPVGAGKLSF*LSCPRP
Trigger: CGGCCTTGGACACGAAAGCAAAAAGGAAAGCTTTCC...AGCTCCAACAGGACCGAGGTGGCTTCCTCCTTCAGGCCAGCATTTCTCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611775.4
CDS TCA 90 bp AGCTGGAAGGCAGGATGTAGAATCTATAACGAACACGGGCGGCATTaGACACGCGTTGGCCATCAACACGTGGTCACTATGAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SWKAGCRIYNEHGRH*TRVGHQHVVTMRSL
Trigger: CAGACTCCTCATAGTGACCACGTGTTGATGGCCAACGCGTGTTCAATGCCGCCCGTGTTCGTTATAGATTCTACATCCTGCCTTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS GCA 90 bp ATATCGGTCTGGAGTTTGCTGATGGTGCCGTCCTTCTCCTTGCACTaGTGTTCCAGCTTCAGGATCCTCTGCTTCAGCCCGTTAATGACT +
Preference number: 5 (lower is better)
Translates to: ISVWSLLMVPSFSLH*CSSFRILCFSPLMT
Trigger: AGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCACCATCAGCAAACTCCAGACCGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS GCA 90 bp AGCTTGCAAGCGGCCATCATACTTCTTTCCGGTGGTTTCAGAACTTaGCAAGAGGGTCTGGAGACGATGCACCTCCTCGTAGTATGTCTC +
Preference number: 5 (lower is better)
Translates to: SLQAAIILLSGGFRT*QEGLETMHLLVVCL
Trigger: GAGACATACTACGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAGTTCTGAAACCACCGGAAAGAAGTATGATGGCCGCTTGCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS-3UTR CAA 90 bp GTGATGTGGAGGTGTTGCAGTGACAATCAGTACACCGTGAACAACACCTGCCACATCTTCTTCTGCCTTTaGGCGCCCGTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VMWRCCSDNQYTVNNTCHIFFCL*APVFFS
Trigger: GGAGAAGAAGACGGGCGCCAAAAGGCAGAAGAAGAT...GTGGCAGGTGTTGTTCACGGTGTACTGATTGTCACTGCAACACCTCCACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCCTGCGGCGTGTGATTTaGAGCTCTCCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: KLSFQSWFLCPRQRCHHGLRRVI*SSPSHL
Trigger: TAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAG...GCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp CAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGTTCTTTCTTCATTTCTaGCAATTCTTGGAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: QSWFLCPRQRCHHGVETVFFLHF*QFLELA
Trigger: AGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA...CACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGGCGTGGAGACAGTGACGTTCTTTCTTCATTTCTaGCAATTCTTGGAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: SWFLCPRQRCHHGVETVTFFLHF*QFLELA
Trigger: AGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA...CGTCACTGTCTCCACGCCGTGATGGCAGCGCTGCCGAGGACATAGGAACCACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp ATTCCAGGCACAAAGGACAAGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCTTCTTTCTTCATTTCTaGCAATTCTTGGAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: IPGTKDKLGQGGALLWAFFFLHF*QFLELA
Trigger: AGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA...GAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCTTGTCCTTTGTGCCTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS-3UTR CAA 90 bp CGCCCAGGTCTAAGGCTCTTCCTCTTGACGCCCCAGCAAGGGCTAATCTCACACATAGCAGATACAGCTTaGCTGCTGTTCTTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: RPGLRLFLLTPQQGLISHIADTA*LLFLKF
Trigger: GAACTTCAAGAACAGCAGCAAAGCTGTATCTGCTAT...GTGTGAGATTAGCCCTTGCTGGGGCGTCAAGAGGAAGAGCCTTAGACCTGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTCTACTTCGTCTCCCCCGGGAGTTGTCTACTTTCCTAGGCCCTGCCAGCAGCATAGCAGATACAGCTTaGCTGCTGTTCTTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SLLRLPRELSTFLGPASSIADTA*LLFLKF
Trigger: GAACTTCAAGAACAGCAGCAAAGCTGTATCTGCTAT...GCTGCTGGCAGGGCCTAGGAAAGTAGACAACTCCCGGGGGAGACGAAGTAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTACTGCCAGCAGGCCCTaGGGAGCTTGGCGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGTASRP*GAWRGG
Trigger: CCCACCTCGCCAAGCTCCCAAGGGCCTGCTGGCAGT...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS TCA 90 bp ACGGGCGGCATTGAACACGCGTTGGCCATCAACACGTGGTCACTATaGGGAGTCTGTGAACACTGCAAATGGAAACGTGTCAACTCTAAC +
Preference number: 5 (lower is better)
Translates to: TGGIEHALAINTWSL*GVCEHCKWKRVNSN
Trigger: GTTAGAGTTGACACGTTTCCATTTGCAGTGTTCACAGACTCCTCATAGTGACCACGTGTTGATGGCCAACGCGTGTTCAATGCCGCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS GCA 90 bp CACTGCAAATGGAAACGTGTCAACTCTAACCCTGAACAGAACAGGTaGAGTGTTGGCAGCACTGCCAAGCTAAGGGCAGTATATGCCGCA +
Preference number: 5 (lower is better)
Translates to: HCKWKRVNSNPEQNR*SVGSTAKLRAVYAA
Trigger: TGCGGCATATACTGCCCTTAGCTTGGCAGTGCTGCCAACACTGCACCTGTTCTGTTCAGGGTTAGAGTTGACACGTTTCCATTTGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS CCA 90 bp TATCAGGTGAGTCTCACTAATGTGGAGGAGAGAGCTGTTCCACACTaGTCTGCAGACCACATGACAGCGGTCTCTTGTACTGCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: YQVSLTNVEERAVPH*SADHMTAVSCTAER
Trigger: TCTCTCAGCAGTACAAGAGACCGCTGTCATGTGGTCTGCAGACCAGTGTGGAACAGCTCTCTCCTCCACATTAGTGAGACTCACCTGATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS CCA 90 bp ACACACAAAACACAGCTTGCAAGCGGCCATCATACTTCTTTCCGGTaGTTTCAGAACTTGCCAAGAGGGTCTGGAGACGATGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: THKTQLASGHHTSFR*FQNLPRGSGDDAPP
Trigger: AGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAGTTCTGAAACCACCGGAAAGAAGTATGATGGCCGCTTGCAAGCTGTGTTTTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS-3UTR CAA 90 bp AATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGATCTGAGCTAGGTTGGGCTATATCGGTCTGGAGTTaGCTGATGGTGCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: NAAKLCCAYLGGSELGWAISVWS*LMVPSF
Trigger: GAAGGACGGCACCATCAGCAAACTCCAGACCGATAT...AGCCCAACCTAGCTCAGATCCACCAAGATAAGCACAGCAAAGCTTGGCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVRSWSL*RSPRGC
Trigger: ACAGCCACGAGGGGACCGCAACAAGGACCACGAGCG...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTGGCCTGCTTTGGCACTaGACGCTGGGGCAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGGLLWH*TLGQES
Trigger: GGACTCCTGCCCCAGCGTCAAGTGCCAAAGCAGGCC...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCGGCCTGCTTTGGCACTaGACGCTGGGGCAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVGLLWH*TLGQES
Trigger: GGACTCCTGCCCCAGCGTCAAGTGCCAAAGCAGGCC...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TGCAGGTTTTTATTCCTCAAAAATGCAGCCAAGCTTTGCTGTGCTTATCTTGGTAAGCCCTCTCCCGACTaGCCCAGAGGCTGCACGCCT +
Preference number: 5 (lower is better)
Translates to: CRFLFLKNAAKLCCAYLGKPSPD*PRGCTP
Trigger: AGGCGTGCAGCCTCTGGGCAAGTCGGGAGAGGGCTT...ACCAAGATAAGCACAGCAAAGCTTGGCTGCATTTTTGAGGAATAAAAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCGGCGAGGTGGGAGCCTaGAGAAATAGCTGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGGEVGA*RNSWLG
Trigger: TCCGAGCCAGCTATTTCTCAAGGCTCCCACCTCGCC...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS GCA 90 bp TCAGAGGAGCTTCCACAACGTGAAGGCAACACACAAAACACAGCTTaGAAGCGGCCATCATACTTCTTTCCGGTGGTTTCAGAACTTGCC +
Preference number: 5 (lower is better)
Translates to: SEELPQREGNTQNTA*KRPSYFFPVVSELA
Trigger: GGCAAGTTCTGAAACCACCGGAAAGAAGTATGATGGCCGCTTGCAAGCTGTGTTTTGTGTGTTGCCTTCACGTTGTGGAAGCTCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS-3UTR CAA 90 bp CTGTGCCAGGAAAGCCTCCTGTATCTCCAAGGATGTCCCTGGAGCCCTCCAGCTTTCTTTCTTCATTTCTaGCAATTCTTGGAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LCQESLLYLQGCPWSPPAFFLHF*QFLELA
Trigger: AGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA...AGCTGGAGGGCTCCAGGGACATCCTTGGAGATACAGGAGGCTTTCCTGGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACCGGCAGATGTGTCTGTaGGCACTGAAAATCCACCAT +
Preference number: 5 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHRQMCL*ALKIHH
Trigger: ATGGTGGATTTTCAGTGCCAACAGACACATCTGCCG...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACAGCAAATCCTGGTTGTaGAGGGTGTCACCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHSKSWL*RVSPGR
Trigger: TCTTCCTGGTGACACCCTCAACAACCAGGATTTGCT...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCGGGACAGGCCGTGTTTaGCTGTGGGGATGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVGTGRV*LWGWGK
Trigger: CTTCCCCCATCCCCACAGCAAAACACGGCCTGTCCC...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTGCCCAGCCATGGAGCTaGGGAGTGCAGAGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLAQPWS*GVQRPH
Trigger: GTGCGGCCTCTGCACTCCCAAGCTCCATGGCTGGGC...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCTCCACCTCTTCTGCCTaGTGGGGACCACCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVSTSSA*WGPPKP
Trigger: GGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGA...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTCGCTCGTGGTCCTTGTaGCGGTCCCCTCGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLRSWSL*RSPRGC
Trigger: ACAGCCACGAGGGGACCGCAACAAGGACCACGAGCG...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTGGTGTCGGCGCTGGTaGCGGATAGCAGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGWCRRW*RIAAPH
Trigger: GTGAGGAGCTGCTATCCGCAACCAGCGCCGACACCA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCAGGAGGCCTCTCCGCTaGGTACTGTCTCCATGGAAC +
Preference number: 5 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLRRPLR*VLSPWN
Trigger: GTTCCATGGAGACAGTACCAAGCGGAGAGGCCTCCT...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCGCTGCCATCACGCTTTGCTGCTGTTCTaGAAGTTCAAGGTGATGTGG +
Preference number: 5 (lower is better)
Translates to: DKLSFQSWFLCPRQRCHHALLLF*KFKVMW
Trigger: CCACATCACCTTGAACTTCAAGAACAGCAGCAAAGC...GTGATGGCAGCGCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS TCA 90 bp CCTCTGCTTCAGCCCGTTAATGACTTAAGTTGTAGCCCATTTTTGTaGTTCTGGTCAATCCTCCAATCGAAATCCTTGGCCAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PLLQPVNDLSCSPFL*FWSILQSKSLARPP
Trigger: AGGAGGCCTGGCCAAGGATTTCGATTGGAGGATTGACCAGAATCACAAAAATGGGCTACAACTTAAGTCATTAACGGGCTGAAGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS-3UTR CAA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCTCGGAATCATCGGAGTaGACGTCATCCCCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGSESSE*TSSPGR
Trigger: TCTACCTGGGGATGACGTCAACTCCGATGATTCCGA...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCGCAGGAGTCCCTTTCTaGGGGACTCACTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGAGVPF*GTHSLL
Trigger: AAGTAGAGAGTGAGTCCCCAAGAAAGGGACTCCTGC...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCCTGCCTGGATTCAGTTaGGTAATCGTCGGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SSPNTINYLSSRGSYVLGLPGFS*VIVGSL
Trigger: CAGACTGCCGACGATTACCAAACTGAATCCAGGCAG...GCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATTCCACCTCTTCTGCCTaGTGGGGACCACCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYSTSSA*WGPPKP
Trigger: GGGCTTGGGTGGTCCCCACAAGGCAGAAGAGGTGGA...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GTCCATCGGAGGGATCAAGGGCATGGTCCTCACGTCTCGTCAGGAGACAAAAATAATCTCATTCAGATCTaGAAGGTTATCGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: VHRRDQGHGPHVSSGDKNNLIQI*KVIGAF
Trigger: GAAAGCACCGATAACCTTCAAGATCTGAATGAGATT...ATTTTTGTCTCCTGACGAGACGTGAGGACCATGCCCTTGATCCCTCCGATGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCCTAGGACCTGAAGCTTaGAGCTGGCAAGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSLGPEA*SWQAGM
Trigger: CATCCCTGCTTGCCAGCTCAAAGCTTCAGGTCCTAG...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGGGAGCTGGGAGCTCTaGGGCCTTATGAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYGSWEL*GLMRNF
Trigger: GAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCC...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS TCA 90 bp TGGAAAAGCCAACACGTGGATTCAGAGGTGCCGGACAGCAACATGTaGGCTCAACACATGAACTTCAGAAAGACAGAAATAGGAAAACAA +
Preference number: 5 (lower is better)
Translates to: WKSQHVDSEVPDSNM*AQHMNFRKTEIGKQ
Trigger: TTGTTTTCCTATTTCTGTCTTTCTGAAGTTCATGTGTTGAGCTCACATGTTGCTGTCCGGCACCTCTGAATCCACGTGTTGGCTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325979.11
CDS-3UTR CAA 90 bp TTCTGCACGTGCAATGACTTCTTTAACTCAATAATCTCGTCATACATATCTTCTTCAGACTTCCTGGCTTaGCGGTTCCCAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: FCTCNDFFNSIISSYISSSDFLA*RFPATA
Trigger: AGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGA...AGAAGATATGTATGACGAGATTATTGAGTTAAAGAAGTCATTGCACGTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCGCATCTCTTCCAGGTaGGTAGTCTTCATATCGGTC +
Preference number: 5 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVRISSR*VVFISV
Trigger: GACCGATATGAAGACTACCAACCTGGAAGAGATGCG...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp CATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCAGAGATAAGGTGACTTaGGCGATGTGGGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: HRSSPNTINYLSSRGSYVRDKVT*AMWVEV
Trigger: AACCTCCACCCACATCGCCAAAGTCACCTTATCTCT...GACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402050.7
CDS-3UTR CAA 90 bp GCATGGGATAGAGAAAGAGTGTGTTATTTTAAAGCTGGACTACCTAACAGCCTCTGCGACCAGCGTCGTTaGGCTATTTTAGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AWDRERVCYFKAGLPNSLCDQRR*AILVSS
Trigger: AGAAGAGACTAAAATAGCCAAACGACGCTGGTCGCA...GAGGCTGTTAGGTAGTCCAGCTTTAAAATAACACACTCTTTCTCTATCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCACCAAAGGAGGAATTTaGCAATCGTTTAGACGGGTT +
Preference number: 5 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSTKGGI*QSFRRV
Trigger: AACCCGTCTAAACGATTGCAAAATTCCTCCTTTGGT...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTATATCGGTCTGGAGTTaGCTGATGGTGCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLISVWS*LMVPSF
Trigger: GAAGGACGGCACCATCAGCAAACTCCAGACCGATAT...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TTCTTTCTTCATTTCTTGCAATTCTTGGAGCTTGCTGGTAAGTGTCTGAATCTCCTGCGGCGTGTGATTTaGAGCTCTCCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: FFLHFLQFLELAGKCLNLLRRVI*SSPSHL
Trigger: TAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAG...GAGATTCAGACACTTACCAGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325997.13
CDS-3UTR CAA 90 bp AGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTCTGAGCCATGTGCTTaGCTTGCTAAGAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: RYHRSSPNTINYLSSRGSSEPCA*LAKSFV
Trigger: GACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGA...GGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS-3UTR CAA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATTCGAGCAAATCCTGGTaGTTGAGGGTGTCACCAGGA +
Preference number: 5 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYSSKSW*LRVSPG
Trigger: TCCTGGTGACACCCTCAACAACCAGGATTTGCTCGA...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATGTCCTCGGCAGCAATCTCATTCAGATCTaGAAGGTTATCGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: SPNTINYLSSRGSYVLGSNLIQI*KVIGAF
Trigger: GAAAGCACCGATAACCTTCAAGATCTGAATGAGATT...GCTGCCGAGGACATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp GCTGAGGTGTTAAGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTCTGCGGCGTGTGATTTaGAGCTCTCCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: AEVLSRYHRSSPNTINYLLRRVI*SSPSHL
Trigger: TAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAG...AAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACTTAACACCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp TATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTCCTATACCAAAGGAGGAATTTaGCAATCGTTTAGACGGGTT +
Preference number: 5 (lower is better)
Translates to: YHRSSPNTINYLSSRGSYTKGGI*QSFRRV
Trigger: AACCCGTCTAAACGATTGCAAAATTCCTCCTTTGGT...ATAGGAACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS-3UTR CAA 90 bp AGTAGGTATCATCGTTCTTCTCCTAACACGATAAATTATCTTTCCAGTCGTGGTTTCTTTCTTCATTTCTaGCAATTCTTGGAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: SRYHRSSPNTINYLSSRGFFLHF*QFLELA
Trigger: AGCAAGCTCCAAGAATTGCAAGAAATGAAGAAAGAA...ACCACGACTGGAAAGATAATTTATCGTGTTAGGAGAAGAACGATGATACCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000623361.3
CDS CCA 72 bp TGGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGCTaGCTCGGGCGTCCGGGTCTGGGAATCCGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: WWRRCPAAPQGC*LGRPGLGIRGQ
Trigger: CTGCCCGCGGATTCCCAGACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000623361.3
CDS CAA 90 bp GTGCCCAGGAACATGGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTaGCTGGCTCGGGCGTCCGGGTCTGGGAATCCGCGGGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: VPRNMVAALPGRPSG*LARASGSGNPRAAL
Trigger: CAGGGCTGCCCGCGGATTCCCAGACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000623361.3
CDS GCA 72 bp ACATGGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTTaGTGGCTCGGGCGTCCGGGTCTGGGAATCCGCGGG +
Preference number: 6 (lower is better)
Translates to: TWWRRCPAAPQG*WLGRPGLGIRG
Trigger: CCCGCGGATTCCCAGACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000623361.3
CDS CCA 72 bp GGCCTTCCCTGGCGCCGGCCCGCGACCCCGCTGCCATaGCAACCAGGCCGCCGACCTACCCAGCCGGGTAAG +
Preference number: 6 (lower is better)
Translates to: GLPWRRPATPLP*QPGRRPTQPGK
Trigger: CTTACCCGGCTGGGTAGGTCGGCGGCCTGGTTGCCATGGCAGCGGGGTCGCGGGCCGGCGCCAGGGAAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402050.7
ENST00000623361.3
CDS CCA 72 bp CCGTGTCCAAGGCCGGCTCCCCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGC +
Preference number: 6 (lower is better)
Translates to: PCPRPAPRCPGT*WRRCPAAPQGC
Trigger: GCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS CCA 72 bp TGTCCAAGGCCGGCTCCCCGGTGCCCAGGAACATGGTaGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: CPRPAPRCPGTW*RRCPAAPQGCW
Trigger: CCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000404984.5
ENST00000415271.6
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000623361.3
CDS CCA 72 bp TCGTGTCCAAGGCCGGCTCCCCGGTGCCCAGGAACATaGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTTGC +
Preference number: 6 (lower is better)
Translates to: SCPRPAPRCPGT*WRRCPAAPQGC
Trigger: GCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325997.13
ENST00000404984.5
ENST00000438376.6
ENST00000623361.3
CDS CAA 72 bp AACATGGTGGCGGCGCTGCCCGGCCGCCCCTCAGGGTaGCTGGCTCGGGCGTCCGGGTCTGGGAATCCGCGG +
Preference number: 6 (lower is better)
Translates to: NMVAALPGRPSG*LARASGSGNPR
Trigger: CCGCGGATTCCCAGACCCGGACGCCCGAGCCAGCAACCCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000623361.3
CDS GCA 72 bp GACTGTCATCTCCCGTGTCCAAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGGCGCTGCCCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: DCHLPCPRPAPR*PGTWWRRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGGGAGATGACAGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS GCA 72 bp CACGACCCTGCCGCCTCCTGGCCGACGCGCCGCTCCTaGGTGGCCTTGCGTGCCCTGCCTCCTGTTTCTAGG +
Preference number: 6 (lower is better)
Translates to: HDPAASWPTRRS*VALRALPPVSR
Trigger: CCTAGAAACAGGAGGCAGGGCACGCAAGGCCACGCAGGAGCGGCGCGTCGGCCAGGAGGCGGCAGGGTCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423196.1
CDS CCA 72 bp ACCCTGCCGCCTCCTGGCCGACGCGCCGCTCCTGCGTaGCCTTGCGTGCCCTGCCTCCTGTTTCTAGGGACC +
Preference number: 6 (lower is better)
Translates to: TLPPPGRRAAPA*PCVPCLLFLGT
Trigger: GGTCCCTAGAAACAGGAGGCAGGGCACGCAAGGCCACGCAGGAGCGGCGCGTCGGCCAGGAGGCGGCAGGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423196.1
CDS GCA 72 bp TCCTTTTTGCTTTCGTGTCCAAGGCCGGCTCCCCGGTaGCCAGGAACATGGTGGCGGCGCTGCCCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SFLLSCPRPAPR*PGTWWRRCPAA
Trigger: GGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGAAAGCAAAAAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438376.6
ENST00000611775.4
CDS CAA 72 bp GCAGCCCGGGTCGCCCCGGGGAGCCTCACCTTGTGCTaGTACACCTTCCACTGGGCCTGCAGGACTCTGGCC +
Preference number: 6 (lower is better)
Translates to: AARVAPGSLTLC*YTFHWACRTLA
Trigger: GGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGCTCCCCGGGGCGACCCGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS GCA 72 bp GGTCAGGGACGCTCGGCCGCCCAGAGGCATGCTCCCTaGCGTCCTGAGGGACCTCCAGGAGGCCACTTTTCT +
Preference number: 6 (lower is better)
Translates to: GQGRSAAQRHAP*RPEGPPGGHFS
Trigger: AGAAAAGTGGCCTCCTGGAGGTCCCTCAGGACGGCAGGGAGCATGCCTCTGGGCGGCCGAGCGTCCCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000325979.11
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000422276.3
ENST00000423395.5
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000611775.4
ENST00000623361.3
CDS GCA 72 bp GGAGCAGCCCGGGTCGCCCCGGGGAGCCTCACCTTGTaGTTGTACACCTTCCACTGGGCCTGCAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: GAARVAPGSLTL*LYTFHWACRTL
Trigger: CAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGCTCCCCGGGGCGACCCGGGCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS TCA 72 bp TGCGGGGTCAGGGACGCTCGGCTTAGAGAGATAAGGTaGCTCGTGTCCAAGGCCGGCTCCCCGGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: CGVRDARLREIR*LVSKAGSPVPR
Trigger: CCTGGGCACCGGGGAGCCGGCCTTGGACACGAGTCACCTTATCTCTCTAAGCCGAGCGTCCCTGACCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404984.5
CDS GCA 72 bp AGACTTCCTGGCTTTGCGGTTCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGGCCGCCCAGAGGCATG +
Preference number: 6 (lower is better)
Translates to: RLPGFAVPSHSF*GVRDARPPRGM
Trigger: CATGCCTCTGGGCGGCCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000325979.11
ENST00000325997.13
ENST00000402050.7
ENST00000415271.6
ENST00000422276.3
ENST00000423395.5
ENST00000438376.6
ENST00000470731.5
ENST00000476665.5
ENST00000611775.4
ENST00000623361.3
CDS CCA 72 bp CGACACAGCCCGGGCTTCCTGGAGGTGGCCACTCTTTaGCTGAGACCTCAGCAGACCAGCTGCCCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: RHSPGFLEVATL*LRPQQTSCPGA
Trigger: GGCACCAGGGCAGCTGGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTCCAGGAAGCCCGGGCTGTGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423196.1
ENST00000476665.5
ENST00000611775.4
CDS CAA 72 bp CCGACACAGCCCGGGCTTCCTGGAGGTGGCCACTCTTaGGCTGAGACCTCAGCAGACCAGCTGCCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: PTQPGLPGGGHS*AETSADQLPWC
Trigger: GCACCAGGGCAGCTGGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTCCAGGAAGCCCGGGCTGTGTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423196.1
ENST00000476665.5
ENST00000611775.4
CDS CCA 72 bp CCGGGGAGCCTCACCTTGTGCTTGTACACCTTCCACTaGGCCTGCAGGACTCTGGCCGCGGCGTCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: PGSLTLCLYTFH*ACRTLAAASLL
Trigger: GAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGCTCCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS CAA 90 bp CCTTCCGTCCCGACACAGCCCGGGCTTCCTGGAGGTGGCCACTCTTaGGCTGAGACCTCAGCAGACCAGCTGCCCTGGTGCCAGAATCCA +
Preference number: 6 (lower is better)
Translates to: PSVPTQPGLPGGGHS*AETSADQLPWCQNP
Trigger: TGGATTCTGGCACCAGGGCAGCTGGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCACCTCCAGGAAGCCCGGGCTGTGTCGGGACGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS CCA 72 bp AGCTGGGCCAAGGCGGGGCCCTGTTGTGGGCCTTCCTaGCATAAGGCGACGCTTAGTTCAGAGGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SWAKAGPCCGPS*HKATLSSEAAP
Trigger: TGGAGCTGCCTCTGAACTAAGCGTCGCCTTATGCCAGGAAGGCCCACAACAGGGCCCCGCCTTGGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476665.5
ENST00000611775.4
CDS GCA 72 bp GGGAGCTGGGAGCTCTTGGGCCCGGCATGGTGCGGCTaGGCTTATCAGGTGAGTCTCACTAATGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GSWELLGPAWCG*AYQVSLTNVEE
Trigger: CTCCTCCACATTAGTGAGACTCACCTGATAAGCGCAGCCGCACCATGCCGGGCCCAAGAGCTCCCAGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS CAA 72 bp CAGGCCCAGTCATTCCTGGAGAGTGAGTGGCTTGCCTaGGAGCACGAAGACTCACAGGGAGCAGCCCGGGTC +
Preference number: 6 (lower is better)
Translates to: QAQSFLESEWLA*EHEDSQGAARV
Trigger: GACCCGGGCTGCTCCCTGTGAGTCTTCGTGCTCCAAGGCAAGCCACTCACTCTCCAGGAATGACTGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS CAA 72 bp CCCTCCAGGCCCAGTCATTCCTGGAGAGTGAGTGGCTaGCCTTGGAGCACGAAGACTCACAGGGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: PSRPSHSWRVSG*PWSTKTHREQP
Trigger: GGGCTGCTCCCTGTGAGTCTTCGTGCTCCAAGGCAAGCCACTCACTCTCCAGGAATGACTGGGCCTGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS GCA 72 bp AGCCTCACCTTGTGCTTGTACACCTTCCACTGGGCCTaGAGGACTCTGGCCGCGGCGTCTCTTCTCCCATCA +
Preference number: 6 (lower is better)
Translates to: SLTLCLYTFHWA*RTLAAASLLPS
Trigger: TGATGGGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGGTGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490913.1
CDS GCA 72 bp AGACTTCCTGGCTTTGCGGTTCCCAGCCACAGCTTCTaGGGGGTCAGGGACGCTCGGCTTAGAGAGATAAGG +
Preference number: 6 (lower is better)
Translates to: RLPGFAVPSHSF*GVRDARLREIR
Trigger: CCTTATCTCTCTAAGCCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404984.5
CDS TCA 72 bp TCTTGGGCCCGGCATGGTGCGGCTGCGCTTATCAGGTaGGTCTCACTAATGTGGAGGAGAGAGCTGTTCCAC +
Preference number: 6 (lower is better)
Translates to: SWARHGAAALIR*VSLMWRRELFH
Trigger: GTGGAACAGCTCTCTCCTCCACATTAGTGAGACTCACCTGATAAGCGCAGCCGCACCATGCCGGGCCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS GCA 72 bp CAGTGTTGGCAGCACTGCCAAGCTAAGGGCAGTATATaGCGCACCCACGTGACAGCCACACATTCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: QCWQHCQAKGSI*RTHVTATHSQR
Trigger: CCTCTGAGAATGTGTGGCTGTCACGTGGGTGCGGCATATACTGCCCTTAGCTTGGCAGTGCTGCCAACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS TCA 72 bp GTCTGCAGACCACATGACAGCGGTCTCTTGTACTGCTaGGAGACAGCGTCTAGGCGAGCACACAAGTGCAGA +
Preference number: 6 (lower is better)
Translates to: VCRPHDSGLLYC*ETASRRAHKCR
Trigger: TCTGCACTTGTGTGCTCGCCTAGACGCTGTCTCTCAGCAGTACAAGAGACCGCTGTCATGTGGTCTGCAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS GCA 72 bp GCGGCCATCATACTTCTTTCCGGTGGTTTCAGAACTTaGCAAGAGGGTCTGGAGACGATGCACCTCCTCGTA +
Preference number: 6 (lower is better)
Translates to: AAIILLSGGFRT*QEGLETMHLLV
Trigger: TACGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAGTTCTGAAACCACCGGAAAGAAGTATGATGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS CCA 72 bp CAGACGTGCTTCTCATTAAACTCCCTTAACTCTGTCTaGCAGTGCCTCCTGGGAGGGAGAGAGGACGCTTCT +
Preference number: 6 (lower is better)
Translates to: QTCFSLNSLNSV*QCLLGGREDAS
Trigger: AGAAGCGTCCTCTCTCCCTCCCAGGAGGCACTGCCAGACAGAGTTAAGGGAGTTTAATGAGAAGCACGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS GCA 72 bp TTTTGCTTTCGTCTCCACATCAGAGTCAAAGGTGACTaGAGACAGACTGTCATCTCCCGTGTCCAAGGCCGG +
Preference number: 6 (lower is better)
Translates to: FCFRLHIRVKGD*RQTVISRVQGR
Trigger: CCGGCCTTGGACACGGGAGATGACAGTCTGTCTGCAGTCACCTTTGACTCTGATGTGGAGACGAAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS GCA 72 bp GTGGCCACTCTTTGGCTGAGACCTCAGCAGACCAGCTaGCCTGGTGCCAGAATCCAAATGAATGAAATTACC +
Preference number: 6 (lower is better)
Translates to: VATLWLRPQQTS*PGARIQMNEIT
Trigger: GGTAATTTCATTCATTTGGATTCTGGCACCAGGGCAGCTGGTCTGCTGAGGTCTCAGCCAAAGAGTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423196.1
ENST00000476665.5
ENST00000611775.4
CDS TCA 72 bp GCAGGATGTAGAATCTATAACGAACACGGGCGGCATTaGACACGCGTTGGCCATCAACACGTGGTCACTATG +
Preference number: 6 (lower is better)
Translates to: AGCRIYNEHGRH*TRVGHQHVVTM
Trigger: CATAGTGACCACGTGTTGATGGCCAACGCGTGTTCAATGCCGCCCGTGTTCGTTATAGATTCTACATCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS GCA 72 bp TGGAAACGTGTCAACTCTAACCCTGAACAGAACAGGTaGAGTGTTGGCAGCACTGCCAAGCTAAGGGCAGTA +
Preference number: 6 (lower is better)
Translates to: WKRVNSNPEQNR*SVGSTAKLRAV
Trigger: TACTGCCCTTAGCTTGGCAGTGCTGCCAACACTGCACCTGTTCTGTTCAGGGTTAGAGTTGACACGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS CCA 72 bp AGTCTCACTAATGTGGAGGAGAGAGCTGTTCCACACTaGTCTGCAGACCACATGACAGCGGTCTCTTGTACT +
Preference number: 6 (lower is better)
Translates to: SLTNVEERAVPH*SADHMTAVSCT
Trigger: AGTACAAGAGACCGCTGTCATGTGGTCTGCAGACCAGTGTGGAACAGCTCTCTCCTCCACATTAGTGAGACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486730.1
CDS CCA 72 bp ACACAGCTTGCAAGCGGCCATCATACTTCTTTCCGGTaGTTTCAGAACTTGCCAAGAGGGTCTGGAGACGAT +
Preference number: 6 (lower is better)
Translates to: TQLASGHHTSFR*FQNLPRGSGDD
Trigger: ATCGTCTCCAGACCCTCTTGGCAAGTTCTGAAACCACCGGAAAGAAGTATGATGGCCGCTTGCAAGCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS TCA 72 bp TCCTTTTTGCTTTCGTCTCCACATCAGAGTCAAAGGTaGCTGCAGACAGACTGTCATCTCCCGTGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: SFLLSSPHQSQR*LQTDCHLPCPR
Trigger: CCTTGGACACGGGAGATGACAGTCTGTCTGCAGTCACCTTTGACTCTGATGTGGAGACGAAAGCAAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402050.7
ENST00000415271.6
ENST00000470731.5
ENST00000476665.5
CDS TCA 72 bp ATTGAACACGCGTTGGCCATCAACACGTGGTCACTATaGGGAGTCTGTGAACACTGCAAATGGAAACGTGTC +
Preference number: 6 (lower is better)
Translates to: IEHALAINTWSL*GVCEHCKWKRV
Trigger: GACACGTTTCCATTTGCAGTGTTCACAGACTCCTCATAGTGACCACGTGTTGATGGCCAACGCGTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS GCA 72 bp TTCTCCTTGCACTGCTGTTCCAGCTTCAGGATCCTCTaGTTCAGCCCGTTAATGACCTCCTTTTCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: FSLHCCSSFRIL*FSPLMTSFSVN
Trigger: ATTCACAGAAAAGGAGGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGCAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427817.1
CDS CCA 72 bp GGCTCTGCTTTGAAACAGCACTTTCTAGCTCTAAGCTaGAAGGCAGGATGTAGAATCTATAACGAACACGGG +
Preference number: 6 (lower is better)
Translates to: GSALKQHFLALS*KAGCRIYNEHG
Trigger: CCCGTGTTCGTTATAGATTCTACATCCTGCCTTCCAGCTTAGAGCTAGAAAGTGCTGTTTCAAAGCAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497572.1
CDS TCA 72 bp CAACACGTGGATTCAGAGGTGCCGGACAGCAACATGTaGGCTCAACACATGAACTTCAGAAAGACAGAAATA +
Preference number: 6 (lower is better)
Translates to: QHVDSEVPDSNM*AQHMNFRKTEI
Trigger: TATTTCTGTCTTTCTGAAGTTCATGTGTTGAGCTCACATGTTGCTGTCCGGCACCTCTGAATCCACGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325979.11
CDS TCA 72 bp CAGCCCGTTAATGACTTAAGTTGTAGCCCATTTTTGTaGTTCTGGTCAATCCTCCAATCGAAATCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: QPVNDLSCSPFL*FWSILQSKSLA
Trigger: GGCCAAGGATTTCGATTGGAGGATTGACCAGAATCACAAAAATGGGCTACAACTTAAGTCATTAACGGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497572.1