Pregenerated sensors for IQCB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173226Ensembl transcript IDs: ENST00000310864.11, ENST00000349820.10, ENST00000393650.7, ENST00000460108.5, ENST00000462442.1, ENST00000471726.1, ENST00000498104.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGATTTCTCCACCTGACCTaGATGAACTATTTCGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SHTNLCVANDEDTEKRKRFLHLT*MNYFEH Trigger: ATGCTCGAAATAGTTCATCCAGGTCAGGTGGAGAAA...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393650.7 |
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| 3UTR-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGTAGAATATAACTCTTaGCTTACTGCAGGTCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: SHTNLCVANDEDTEKRKRVEYNS*LTAGLV Trigger: GACAAGACCTGCAGTAAGCAAAGAGTTATATTCTAC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR GCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGACCTTCCGGGGCAGCGTaGGTCGCGACGCGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRPSGAA*VATREG Trigger: CCCTTCCCGCGTCGCGACGCACGCTGCCCCGGAAGG...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393650.7 |
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| CDS-3UTR GCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGACGCCGCGCCTGTTACTaGCTCCACGGATCACTCATC | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRRRACY*LHGSLI Trigger: GATGAGTGATCCGTGGAGGCAGTAACAGGCGCGGCG...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR GCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGACTCTTATTACCCTGTTaGCAGGCCACCGGGTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRLLLPC*QATGSG Trigger: GCCGGACCCGGTGGCCTGGCAACAGGGTAATAAGAG...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR GCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGACAGGGTGCTTGTATGTaGTTCAGGGTTGTGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRQGACM*FRVVRW Trigger: CCATCTCACAACCCTGAAGCACATACAAGCACCCTG...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR TCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGTTCAACGTTGGTGCTaGTCTGTGCTATCAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRVQRWC*SVLSEL Trigger: AAGCTCTGATAGCACAGATCAGCACCAACGTTGAAC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR TCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGATACTTAGTAGACGTCTaGGTCCTTTGTAGCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRYLVDV*VLCSRY Trigger: GTACCTGCTACAAAGGACTCAGACGTCTACTAAGTA...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000310864.11 ENST00000393650.7 |
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| CDS-3UTR TCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGATTGATCGTTTGGATCTaGAACTCCTCTGCAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRLIVWI*NSSAKQ Trigger: TTGCTTTGCAGAGGAGTTTCAGATCCAAACGATCAA...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310864.11 |
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| CDS-3UTR CCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAAAGCCCACACAGCAATaGCTTAATATCTGTGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRKPTQQ*LNICVS Trigger: GCTTACACAGATATTAAGCCATTGCTGTGTGGGCTT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAACTGCAGATCCTATTTaGACATTGTCAGCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRTADPI*TLSACS Trigger: ACTGCAAGCTGACAATGTCCAAATAGGATCTGCAGT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGGTTACTCACTAAGGTaGTTTGGTTCCACCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRGYSLR*FGSTNE Trigger: TTCATTGGTGGAACCAAACCACCTTAGTGAGTAACC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAACACAAATCTGTGTGTaGCTAACGATGAGGATACAG | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRTQICV*LTMRIQ Trigger: CTGTATCCTCATCGTTAGCCACACACAGATTTGTGT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR TCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGAGAATAATCTTGACTaGGGACCAAGAGGCAATATT | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRENNLD*GPRGNI Trigger: AATATTGCCTCTTGGTCCTCAGTCAAGATTATTCTC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAACATCTTTGATCGTTTaGATCTGCTCTTCTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRTSLIV*ICSSTS Trigger: GGAAGTAGAAGAGCAGATCCAAACGATCAAAGATGT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393650.7 |
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| CDS-3UTR TCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGACTTTGTAGTACATTCTaGATAAGTTCAACATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRLCSTF*ISSTWP Trigger: AGGCCATGTTGAACTTATTCAGAATGTACTACAAAG...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR GCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGATTGAAGTGTGACAGCTaGTTTATACTCTATGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRLKCDS*FILYER Trigger: TCTCTCATAGAGTATAAAGCAGCTGTCACACTTCAA...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CCA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAAATATCTGTGTAAGCTaGGAAATTGTAGTCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: SHTNLCVANDEDTEKRKRNICVS*EIVVQP Trigger: TGGTTGGACTACAATTTCCCAGCTTACACAGATATT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGATCTCTTATTACCCTGTaGCCAGGCCACCGGGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRSLITL*PGHRVR Trigger: CCGGACCCGGTGGCCTGGCAACAGGGTAATAAGAGA...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGGGTCCGGCCCAGCCTaGATTCTTCGGGAATCACTT | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRGSGPA*ILRESL Trigger: AAGTGATTCCCGAAGAATCAAGGCTGGGCCGGACCC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGACTTCCACCAGGGTGCTaGTATGTGCTTCAGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRLPPGC*YVLQGC Trigger: ACAACCCTGAAGCACATACAAGCACCCTGGTGGAAG...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS TCA 90 bp | ACAGCTTCGGCACACCTTCAAAGGGTAGGATTTACACAGACAGGTTaGAGGAGACATAACCACCTACCCCAAAATCAATTGACAAATGTG | + |
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Preference number: 5 (lower is better) Translates to: TASAHLQRVGFTQTG*RRHNHLPQNQLTNV Trigger: CACATTTGTCAATTGATTTTGGGGTAGGTGGTTATGTCTCCTTCAACCTGTCTGTGTAAATCCTACCCTTTGAAGGTGTGCCGAAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471726.1 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGACTGCCTCCTTCAGACTaGGTGCCTTCATTAGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRLPPSD*VPSLAV Trigger: AACAGCTAATGAAGGCACCAAGTCTGAAGGAGGCAG...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS GCA 90 bp | CACACTGTTAAGTATAAAGCAGGGGTTCAAACTAGAGCCACCATCTaGCTTAAAGCATTTAACTACGATATGAAACAGCTTCGGCACACC | + |
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Preference number: 5 (lower is better) Translates to: HTVKYKAGVQTRATI*LKAFNYDMKQLRHT Trigger: GGTGTGCCGAAGCTGTTTCATATCGTAGTTAAATGCTTTAAGGCAGATGGTGGCTCTAGTTTGAACCCCTGCTTTATACTTAACAGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471726.1 |
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| CDS TCA 90 bp | TTCAAACTAGAGCCACCATCTGCCTTAAAGCATTTAACTACGATATaGAACAGCTTCGGCACACCTTCAAAGGGTAGGATTTACACAGAC | + |
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Preference number: 5 (lower is better) Translates to: FKLEPPSALKHLTTI*NSFGTPSKGRIYTD Trigger: GTCTGTGTAAATCCTACCCTTTGAAGGTGTGCCGAAGCTGTTTCATATCGTAGTTAAATGCTTTAAGGCAGATGGTGGCTCTAGTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471726.1 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGATTCGAGAATAATCTaGACTGAGGACCAAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRDSRII*TEDQEA Trigger: TGCCTCTTGGTCCTCAGTCAAGATTATTCTCGAATC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAAACATCTTTGATCGTTaGGATCTGAAACTCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRNIFDR*DLKLLC Trigger: GCAGAGGAGTTTCAGATCCAAACGATCAAAGATGTT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310864.11 |
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| CDS CCA 90 bp | GGAGTGCAGTTGGATTGCGTAATTACCCTGAAAAACCACCTGTTATaGAAACCATCTGTAAACTTTCTCGAGTGTTTCTCCTATAATTCA | + |
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Preference number: 5 (lower is better) Translates to: GVQLDCVITLKNHLL*KPSVNFLECFSYNS Trigger: TGAATTATAGGAGAAACACTCGAGAAAGTTTACAGATGGTTTCCATAACAGGTGGTTTTTCAGGGTAATTACGCAATCCAACTGCACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471726.1 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGGAAATGTCCTTCAATaGAGCATTTCTTTTCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRGNVLQ*SISFPH Trigger: GTGAGGAAAAGAAATGCTCAATTGAAGGACATTTCC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310864.11 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAAACATCTTTGATCGTTaGGATCTGCTCTTCTACTTC | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRNIFDR*DLLFYF Trigger: GAAGTAGAAGAGCAGATCCAAACGATCAAAGATGTT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393650.7 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAGATCGTTTGGATCTGTaGATCTGTAGTATATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRDRLDL*ICSIFC Trigger: ACAGAATATACTACAGATCAACAGATCCAAACGATC...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000349820.10 |
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| CDS-3UTR CAA 90 bp | AGCCACACAAATCTGTGTGTGGCTAACGATGAGGATACAGAGAAAAGAAAAAGAAACATCTTTGATCGTTaGGATCTGTTGATCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SHTNLCVANDEDTEKRKRNIFDR*DLLICS Trigger: ACTACAGATCAACAGATCCAAACGATCAAAGATGTT...TCTTTTTCTTTTCTCTGTATCCTCATCGTTAGCCACACACAGATTTGTGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000349820.10 |
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| CDS CAA 72 bp | CTACCCTGTTGCCAGGCCACCGGGTCCGGCCCAGCCTaGATTCTTCGGGAATCACTTCTCCCTCGCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LPCCQATGSGPA*ILRESLLPRRA Trigger: GGCGCGGCGAGGGAGAAGTGATTCCCGAAGAATCAAGGCTGGGCCGGACCCGGTGGCCTGGCAACAGGGTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462442.1 ENST00000471726.1 |
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| CDS CAA 72 bp | TTACCCTGTTGCCAGGCCACCGGGTCCGGCCCAGCCTaGATTCTTCGGGAATCACTTCTCCCTCGCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LPCCQATGSGPA*ILRESLLPRRA Trigger: GGCGCGGCGAGGGAGAAGTGATTCCCGAAGAATCAAGGCTGGGCCGGACCCGGTGGCCTGGCAACAGGGTAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 ENST00000460108.5 ENST00000498104.1 |
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| CDS GCA 72 bp | CTTCGGGAATCACTTCTCCCTCGCCGCGCCTGTTACTaGCTCCACGGATCACTCATCCTCGCTTCGCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LRESLLPRRACY*LHGSLILASRS Trigger: AGAACGCGAAGCGAGGATGAGTGATCCGTGGAGGCAGTAACAGGCGCGGCGAGGGAGAAGTGATTCCCGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 ENST00000460108.5 ENST00000462442.1 ENST00000471726.1 ENST00000498104.1 |
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| CDS CAA 90 bp | TTTCTCTTATTACCCTGTTGCCAGGCCACCGGGTCCGGCCCAGCCTaGATTCTTCGGGAATCACTTCTCCCTCGCCGCGCCTGTTACTGC | + |
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Preference number: 6 (lower is better) Translates to: FLLLPCCQATGSGPA*ILRESLLPRRACYC Trigger: GCAGTAACAGGCGCGGCGAGGGAGAAGTGATTCCCGAAGAATCAAGGCTGGGCCGGACCCGGTGGCCTGGCAACAGGGTAATAAGAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 ENST00000460108.5 ENST00000498104.1 |
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| CDS GCA 72 bp | GACAATTATTTATCTATTTTAAGGCTACTACCCTGTTaGCAGGCCACCGGGTCCGGCCCAGCCTTGATTCTT | + |
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Preference number: 6 (lower is better) Translates to: DNYLSILRLLPC*QATGSGPALIL Trigger: AAGAATCAAGGCTGGGCCGGACCCGGTGGCCTGGCAACAGGGTAGTAGCCTTAAAATAGATAAATAATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462442.1 ENST00000471726.1 |
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| CDS CCA 72 bp | AAGCCCACACAGCAATGGCTTAATATCTGTGTAAGCTaGGAAATTGTAGTCCAACCACCCTGGATTCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: KPTQQWLNICVS*EIVVQPPWIRE Trigger: TTCTCGAATCCAGGGTGGTTGGACTACAATTTCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 |
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| CDS TCA 72 bp | GAGCCACCATCTGCCTTAAAGCATTTAACTACGATATaGAACAGCTTCGGCACACCTTCAAAGGGTAGGATT | + |
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Preference number: 6 (lower is better) Translates to: EPPSALKHLTTI*NSFGTPSKGRI Trigger: AATCCTACCCTTTGAAGGTGTGCCGAAGCTGTTTCATATCGTAGTTAAATGCTTTAAGGCAGATGGTGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471726.1 |
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| CDS CAA 90 bp | AAGCTGGGAAATTGTAGTCCAACCACCCTGGATTCGAGAATAATCTaGACTGAGGACCAAGAGGCAATATTGAATGAGATCATAACAATA | + |
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Preference number: 6 (lower is better) Translates to: KLGNCSPTTLDSRII*TEDQEAILNEIITI Trigger: TATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTATTCTCGAATCCAGGGTGGTTGGACTACAATTTCCCAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000310864.11 ENST00000349820.10 ENST00000393650.7 ENST00000462442.1 |
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| CDS GCA 72 bp | AAGTATAAAGCAGGGGTTCAAACTAGAGCCACCATCTaGCTTAAAGCATTTAACTACGATATGAAACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: KYKAGVQTRATI*LKAFNYDMKQL Trigger: AAGCTGTTTCATATCGTAGTTAAATGCTTTAAGGCAGATGGTGGCTCTAGTTTGAACCCCTGCTTTATACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471726.1 |
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