RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQCA1L (Homo sapiens)

Ensembl gene IDs: ENSG00000278685

Ensembl transcript IDs: ENST00000611102.1, ENST00000613681.1, ENST00000615129.4

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATCCGCTCGTAGACCCGGCACAGACCCCGCATCTCGGCCAGCTGTaGCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTCCGGGAGT +
Preference number: 1 (lower is better)
Translates to: DPLVDPAQTPHLGQL*PGGCPNQHHTVSGS
Trigger: ACTCCCGGAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGGTCTGTGCCGGGTCTACGAGCGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR TCA 90 bp TACGCTTCCAGAGCACATAGCGGGATGCGTAGTCAGGCCGGGGCATaGAGAGGATCCGCTCGTAGACCCGGCACAGACCCCGCATCTCGG +
Preference number: 1 (lower is better)
Translates to: YASRAHSGMRSQAGA*RGSARRPGTDPASR
Trigger: CCGAGATGCGGGGTCTGTGCCGGGTCTACGAGCGGATCCTCTTCATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTCTGGAAGCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR TCA 90 bp TCAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCAAGGCCTTGGTaGGGTCCTTCTTTATCCGCTTTGGGTCCATCTCCTTGTCTTCTT +
Preference number: 1 (lower is better)
Translates to: SASHGLRESAAARPW*GPSLSALGPSPCLL
Trigger: AAGAAGACAAGGAGATGGACCCAAAGCGGATAAAGAAGGACCTCACCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR CCA 90 bp CCGCATACAAAGCCACATTCTGTCGTATGTCAAACAGGGATGGCATaGGCAACTTCTTCACCAAACTCAGAGTGGATCCAAGATACAGGA +
Preference number: 1 (lower is better)
Translates to: PHTKPHSVVCQTGMA*ATSSPNSEWIQDTG
Trigger: TCCTGTATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTGGCTTTGTATGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR CCA 90 bp AAGGACCGCATACAAAGCCACATTCTGTCGTATGTCAAACAGGGATaGCATGGGCAACTTCTTCACCAAACTCAGAGTGGATCCAAGATA +
Preference number: 1 (lower is better)
Translates to: KDRIQSHILSYVKQG*HGQLLHQTQSGSKI
Trigger: TATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTGGCTTTGTATGCGGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR CAA 90 bp AGACCCGGCACAGACCCCGCATCTCGGCCAGCTGTGGCCGGGAGGTaGTCCCAATCAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: RPGTDPASRPAVAGR*SQSASHGLRESAAA
Trigger: TGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGGTCTGTGCCGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR-3UTR TCA 90 bp CTCGTAGACCCGGCACAGACCCCGCATCTCGGCCAGCTGTGGCCGGGAGGTTGTGCCGCAAGGCCTTGGTaGGGTCCTTCTTTATCCGCT +
Preference number: 2 (lower is better)
Translates to: LVDPAQTPHLGQLWPGGCAARPW*GPSLSA
Trigger: AGCGGATAAAGAAGGACCTCACCAAGGCCTTGCGGC...ACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGGTCTGTGCCGGGTCTACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR CAA 90 bp CCAATCAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCAAGGCCTaGGTGAGGTCCTTCTTTATCCGCTTTGGGTCCATCTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: PISITRSPGVSSRKA*VRSFFIRFGSISLS
Trigger: AGACAAGGAGATGGACCCAAAGCGGATAAAGAAGGACCTCACCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR-3UTR CCA 90 bp GGATGCCCCGGGCCTCTATCATACGCTTCCAGAGCACATAGCGGGATGCGTAGTCTTCTTTATCCGCTTTaGGTCCATCTCCTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GCPGPLSYASRAHSGMRSLLYPL*VHLLVF
Trigger: GAAGACAAGGAGATGGACCCAAAGCGGATAAAGAAG...ACTACGCATCCCGCTATGTGCTCTGGAAGCGTATGATAGAGGCCCGGGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR-3UTR TCA 90 bp GGCAACTTCTTCACCAAACTCAGAGTGGATCCAAGATACAGGAAGTCACCTATGAGCTTCCTCAGCTCCTaGCGCATCAGCTCATCCACC +
Preference number: 2 (lower is better)
Translates to: GNFFTKLRVDPRYRKSPMSFLSS*RISSST
Trigger: GGTGGATGAGCTGATGCGTCAGGAGCTGAGGAAGCT...CATAGGTGACTTCCTGTATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR-3UTR CCA 90 bp TTGTCCCAATCAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCAAGGCCTTGGTCTCCTTGTCTTCTTTaGGGGTCTTCTTATAGAAAT +
Preference number: 2 (lower is better)
Translates to: LSQSASHGLRESAAARPWSPCLL*GSSYRN
Trigger: ATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGA...CCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGATTGGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR-3UTR CCA 90 bp CTCTTCCTTAGAAGGCCAGAAATAACAAGCTCTTCGTACAGAGACTCCACAGACCCCAGGTGTTTTCTTTaGAGCCCTCAGGGGTCTTTC +
Preference number: 2 (lower is better)
Translates to: LFLRRPEITSSSYRDSTDPRCFL*SPQGSF
Trigger: GAAAGACCCCTGAGGGCTCCAAAGAAAACACCTGGG...GTCTGTGGAGTCTCTGTACGAAGAGCTTGTTATTTCTGGCCTTCTAAGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR-3UTR TCA 90 bp TCTTTCAATGCTACTGACTCACTCTTCCTTAGAAGGCCAGAAATAACAAGCTCTCTCCACAGACCTGTCTaGGGTCAGATCTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SFNATDSLFLRRPEITSSLHRPV*GQIFFL
Trigger: AAGGAAAAAGATCTGACCTCAGACAGGTCTGTGGAG...AGAGCTTGTTATTTCTGGCCTTCTAAGGAAGAGTGAGTCAGTAGCATTGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR CCA 72 bp GTAGACCCGGCACAGACCCCGCATCTCGGCCAGCTGTaGCCGGGAGGTTGTCCCAATCAGCATCACACGGTC +
Preference number: 3 (lower is better)
Translates to: VDPAQTPHLGQL*PGGCPNQHHTV
Trigger: GACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGGTCTGTGCCGGGTCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR TCA 72 bp AGAGCACATAGCGGGATGCGTAGTCAGGCCGGGGCATaGAGAGGATCCGCTCGTAGACCCGGCACAGACCCC +
Preference number: 3 (lower is better)
Translates to: RAHSGMRSQAGA*RGSARRPGTDP
Trigger: GGGGTCTGTGCCGGGTCTACGAGCGGATCCTCTTCATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR-3UTR CAA 90 bp ACGCTTCCAGAGCACATAGCGGGATGCGTAGTCAGGCCGGGGCATGAAGAGGATGCTGTGGCCGGGAGGTaGTCCCAATCAGCATCACAC +
Preference number: 3 (lower is better)
Translates to: TLPEHIAGCVVRPGHEEDAVAGR*SQSASH
Trigger: GTGTGATGCTGATTGGGACAACCTCCCGGCCACAGC...ATCCTCTTCATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTCTGGAAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR TCA 72 bp CACGGTCTCCGGGAGTCAGCAGCCGCAAGGCCTTGGTaGGGTCCTTCTTTATCCGCTTTGGGTCCATCTCCT +
Preference number: 3 (lower is better)
Translates to: HGLRESAAARPW*GPSLSALGPSP
Trigger: AGGAGATGGACCCAAAGCGGATAAAGAAGGACCTCACCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR TCA 72 bp TCCTTGTCCACAGCCAGACGGAGCTTCCTCAGCTCCTaGCGCATCAGCTCATCCACCTGTTCACACCCAGGC +
Preference number: 3 (lower is better)
Translates to: SLSTARRSFLSS*RISSSTCSHPG
Trigger: GCCTGGGTGTGAACAGGTGGATGAGCTGATGCGTCAGGAGCTGAGGAAGCTCCGTCTGGCTGTGGACAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR-3UTR CAA 90 bp CACATAGCGGGATGCGTAGTCAGGCCGGGGCATGAAGAGGATCCGCTCGTAGACTTTGGGTCCATCTCCTaGTCTTCTTTGGGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: HIAGCVVRPGHEEDPLVDFGSIS*SSLGVF
Trigger: GAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAA...GTCTACGAGCGGATCCTCTTCATGCCCCGGCCTGACTACGCATCCCGCTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR-3UTR CAA 90 bp CAGCTGTGGCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTCCGGGAGTCAGCCTTCTTTATCCGCTTaGGGTCCATCTCCTTGTCTT +
Preference number: 3 (lower is better)
Translates to: QLWPGGCPNQHHTVSGSQPSLSA*GPSPCL
Trigger: AAGACAAGGAGATGGACCCAAAGCGGATAAAGAAGG...CTGACTCCCGGAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
3UTR-3UTR CAA 90 bp ATTCTGTCGTATGTCAAACAGGGATGGCATGGGCAACTTCTTCACCAAACTCAGGGTCTTTCTTCCTCCTaGTCCACAGCCAGACGGAGC +
Preference number: 3 (lower is better)
Translates to: ILSYVKQGWHGQLLHQTQGLSSS*STARRS
Trigger: GCTCCGTCTGGCTGTGGACAAGGAGGAAGAAAGACC...CTGAGTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR-3UTR CAA 90 bp GGATGGCATGGGCAACTTCTTCACCAAACTCAGAGTGGATCCAAGATACAGGAATCCCAGGTGTTTTCTTaGGAGCCCTCAGGGGTCTTT +
Preference number: 3 (lower is better)
Translates to: GWHGQLLHQTQSGSKIQESQVFS*EPSGVF
Trigger: AAAGACCCCTGAGGGCTCCAAAGAAAACACCTGGGA...TTCCTGTATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCCCATGCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR CCA 72 bp GGGATGGCATGGGCAACTTCTTCACCAAACTCAGAGTaGATCCAAGATACAGGAAGTCACCTATGTAGTCTT +
Preference number: 3 (lower is better)
Translates to: GMAWATSSPNSE*IQDTGSHLCSL
Trigger: AAGACTACATAGGTGACTTCCTGTATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCCCATGCCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR CCA 72 bp AAGCCACATTCTGTCGTATGTCAAACAGGGATGGCATaGGCAACTTCTTCACCAAACTCAGAGTGGATCCAA +
Preference number: 3 (lower is better)
Translates to: KPHSVVCQTGMA*ATSSPNSEWIQ
Trigger: TTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
3UTR CCA 72 bp ATACAAAGCCACATTCTGTCGTATGTCAAACAGGGATaGCATGGGCAACTTCTTCACCAAACTCAGAGTGGA +
Preference number: 3 (lower is better)
Translates to: IQSHILSYVKQG*HGQLLHQTQSG
Trigger: TCCACTCTGAGTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTGGCTTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR TCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGCACCAGCTCGTCCTTaGGCTCCAGCACGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAAPARP*APARGP
Trigger: CGGGCCGCGTGCTGGAGCTCAAGGACGAGCTGGTGC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp GGATCCGCTCGTAGACCCGGCACAGACCCCGCATCTCGGCCAGCTGTGGCCGGGTCTGAGAACCGCAAATaGCAAAAGCTGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSARRPGTDPASRPAVAGSENRK*QKLGAP
Trigger: CGGAGCCCCCAGCTTTTGGCATTTGCGGTTCTCAGA...CCCGGCCACAGCTGGCCGAGATGCGGGGTCTGTGCCGGGTCTACGAGCGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGGTCCAGCAGCTCCTaGAGGGTCGCGTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAWSSSS*RVAWED
Trigger: GTCCTCCCACGCGACCCTGCAGGAGCTGCTGGACCA...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCTGTACTGGAAGGACTaGCGCTCCCGGTCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPLYWKD*RSRSGA
Trigger: TGCGCCCGACCGGGAGCGGCAGTCCTTCCAGTACAG...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCAGGTGCTGGGTCGGCTaGATGCCCCGGGCCTCTATC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALARCWVG*MPRASI
Trigger: GATAGAGGCCCGGGGCATCCAGCCGACCCAGCACCT...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp CCCCGCATCTCGGCCAGCTGTGGCCGGGAGGTTGTCCCAATCAGCATCACACGGAGTCAGGCCGGGGCATaGAGAGGATCCGCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: PRISASCGREVVPISITRSQAGA*RGSARR
Trigger: TCTACGAGCGGATCCTCTTCATGCCCCGGCCTGACT...CCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGCACTGATGTCCAGGTaGTGGGTCGGCTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAALMSR*WVGWMP
Trigger: GGGCATCCAGCCGACCCAGCACCTGGACATCAGTGC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCATCCTGCAGGGTCGCGTaGGAGGACTCCCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISSCRVA*EDSQRR
Trigger: GCGCCTCTGGGAGTCCTCCCACGCGACCCTGCAGGA...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCTCGCTCCCGCACAGTaGTGGACTGCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALALAPAQ*WTAPAG
Trigger: TCCTGCTGGAGCAGTCCACCACTGTGCGGGAGCGAG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCTGATGTCCAGGTGCTaGGTCGGCTGGATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPLMSRC*VGWMPR
Trigger: CCGGGGCATCCAGCCGACCCAGCACCTGGACATCAG...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
3UTR CAA 72 bp ACAGACCCCGCATCTCGGCCAGCTGTGGCCGGGAGGTaGTCCCAATCAGCATCACACGGTCTCCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: TDPASRPAVAGR*SQSASHGLRES
Trigger: TGACTCCCGGAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp GCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCAGCATCTTCTTCCCCATaGCAGAGGGGCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AGRLSQSASHGLRESAAAASSSP*QRGPPG
Trigger: TCCTGGTGGGCCCCTCTGGCATGGGGAAGAAGATGC...TGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGATTGGGACAACCTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGAGCAGCCGCCGCTTCTaGGGCTGCACCATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPSSRRF*GCTIWS
Trigger: TGACCAGATGGTGCAGCCGCAGAAGCGGCGGCTGCT...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGCTCCCGCACAGTGGTaGACTGCTCCAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPAPAQW*TAPAGS
Trigger: ACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGAGC...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCACCACCAGGGGCCGCTTaGACAGTTGCAGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISPPGAA*TVAGTA
Trigger: GGCGGTTCCTGCAACTGTCCAAGCGGCCCCTGGTGG...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCCCATCCCTTTACCCTTaGGCCACTGCCCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAPSLYP*ATALSH
Trigger: GTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGG...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGCCGCAAGGCCTTGGTaGGGTCCTTCTTTATCCGCT +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAAARPW*GPSLSA
Trigger: AGCGGATAAAGAAGGACCTCACCAAGGCCTTGCGGC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGAGTCAGGCCGGGGCATaGAGAGGATCCGCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPSQAGA*RGSARR
Trigger: TCTACGAGCGGATCCTCTTCATGCCCCGGCCTGACT...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCTTCGAATCTCTCGCATaGAGGTGGCTCGAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALAFESLA*RWLEAG
Trigger: GCCGGCTTCGAGCCACCTTCATGCGAGAGATTCGAA...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCACCTTGGCTAGGGCACTaGTGTCCAGGTGCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISPWLGH*CPGAGS
Trigger: CGACCCAGCACCTGGACATCAGTGCCCTAGCCAAGG...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCTGCCCAGTGGGGTCTTaGAGTACCAGTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALACPVGS*STSPSG
Trigger: CCCTGAAGGACTGGTACTTCAAGACCCCACTGGGCA...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGCTGGGTCGGCTGGATaGCCCGGGCCTCTATCATAC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISAGSAG*PGPLSY
Trigger: GTATGATAGAGGCCCGGGGCATCCAGCCGACCCAGC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGTGAGCTTGAAATCCTaGAGCACGCGGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAVSLKS*STRSRQ
Trigger: CTGCCTGGACCGCGTGCTGCAGGATTTCAAGCTCAC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGCCGGTCCTGCTGAGTaGGTTTCCTCTGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAAGPAE*VSSADS
Trigger: GCTATCTGCAGAGGAAACGCACTCAGCAGGACCGGC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGCCGCTTGGACAGTTaGAGGAACCGCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISGRLDS*RNRRSL
Trigger: GAGTGAGCGGCGGTTCCTGCAACTGTCCAAGCGGCC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTAGTGGGGCCATGATGTaGATATCCGGGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPSGAMM*ISGEPS
Trigger: GCTTGGCTCCCCGGATATCCACATCATGGCCCCACT...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CGCATCTCGGCCAGCTGTGGCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTCATCTCGGCCAGCTGTaGCCGGGAGGTTGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: RISASCGREVVPISITRSHLGQL*PGGCPN
Trigger: ATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATG...AGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCATCTCGGCCAGCTGTaGCCGGGAGGTTGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPHLGQL*PGGCPN
Trigger: ATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATG...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGATGCGAGCCTGTACTaGAAGGACTGCCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISDASLY*KDCRSR
Trigger: CCGGGAGCGGCAGTCCTTCCAGTACAGGCTCGCATC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAACGCGGTCCAGGCAGTaGTTCTCACACAGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISTRSRQ*FSHRSA
Trigger: CGCCGACCTGTGTGAGAACCACTGCCTGGACCGCGT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCGGTGCTCTACCTGGTTaGGTGAGGGGAGCATGCCAA +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALAGALPG*VRGACQ
Trigger: TTGGCATGCTCCCCTCACCCAACCAGGTAGAGCACC...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCTCAGGTGCTCTACCTaGTTGGGTGAGGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALALRCST*LGEGSM
Trigger: CATGCTCCCCTCACCCAACCAGGTAGAGCACCTGAG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCCACGAGGCATGGCTaGGAGATGATGCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQASTRHG*EMMLRC
Trigger: GCACCTGAGCATCATCTCCCAGCCATGCCTCGTGGA...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCCTGTGCACACTGCCTTaGCCAGCATCTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQALCTLP*PASSSP
Trigger: TGGGGAAGAAGATGCTGGTCAAGGCAGTGTGCACAG...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCACACCTTCTGTATGGTaGCAGCTGCTTGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALATPSVW*QLLGPD
Trigger: GTCAGGGCCAAGCAGCTGTCACCATACAGAAGGTGT...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTAGGGGAGCATGCCAATaGACTCCATCTCCATTCGCC +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPRGACQ*TPSPFA
Trigger: GGCGAATGGAGATGGAGTTCATTGGCATGCTCCCCT...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCTCTACCTGGTTGGGTaGGGGGAGCATGCCAATGAA +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPLYLVG*GEHANE
Trigger: TTCATTGGCATGCTCCCCTCACCCAACCAGGTAGAG...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGGGCATGGCTGGGAGATaGTGCTCAGGTGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPGMAGR*CSGALP
Trigger: AGGTAGAGCACCTGAGCATCATCTCCCAGCCATGCC...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGCATCTTCTTCCCCATaGCAGAGGGGCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISASSSP*QRGPPG
Trigger: TCCTGGTGGGCCCCTCTGGCATGGGGAAGAAGATGC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp CCCCGCATCTCGGCCAGCTGTGGCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTGTGCCCCATTCCTaGCAGGATATTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRISASCGREVVPISITRSVPHS*QDICPA
Trigger: TGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGA...CCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp GAGCACATAGCGGGATGCGTAGTCAGGCCGGGGCATGAAGAGGATCCGCTCGTAGAGCACATAGCGGGATaGGTAGTCAGGCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: EHIAGCVVRPGHEEDPLVEHIAG*VVRPGH
Trigger: ATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTC...TACGAGCGGATCCTCTTCATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGAGCACATAGCGGGATaGGTAGTCAGGCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISEHIAG*VVRPGH
Trigger: ATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGTCCACTCCTCCACGCTaGCCCTTGTTTGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPSTPPR*PLFAGG
Trigger: ACCACCAGCAAACAAGGGGCAGCGTGGAGGAGTGGA...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGGGTTCGAGCAGAAGCTaGTCTTGGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPGSSRS*SWSSSS
Trigger: GGAGCTGCTGGACCAAGAGCAGCTTCTGCTCGAACC...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGTGCAGGTAGAGCGATaGGAGCCTGTACTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPVQVER*EPVLEG
Trigger: TCCTTCCAGTACAGGCTCGCATCGCTCTACCTGCAC...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGGCCTTCACCATTGCTaGCCGGAACTCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAGLHHC*PELLLF
Trigger: AAAGAGGAGGAGTTCCGGGCAGCAATGGTGAAGGCC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGATGGGCCTTCACCATTaGTGCCCGGAACTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPMGLHH*CPELLL
Trigger: GAGGAGGAGTTCCGGGCAGCAATGGTGAAGGCCCAT...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGCCACTAATCTCAGGTaGCCGCAAGCCTTAGCCATC +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAATNLR*PQALAI
Trigger: GATGGCTAAGGCTTGCGGGCACCTGAGATTAGTGGC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGATCTGGCGGAGCCTCTaGACATCCTCCACGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPIWRSL*TSSTRH
Trigger: ATGCCTCGTGGAGGATGTCCAGAGGCTCCGCCAGAT...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCTCCTCTTTCTCCATCTaGCGGAGCCTCTGGACATCC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALASSFSI*RSLWTS
Trigger: GGATGTCCAGAGGCTCCGCCAGATGGAGAAAGAGGA...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp CAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCAAGGCCTTGGTGAGGTCCTTCTGTGCACACTGCCTTaGCCAGCATCTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QHHTVSGSQQPQGLGEVLLCTLP*PASSSP
Trigger: TGGGGAAGAAGATGCTGGTCAAGGCAGTGTGCACAG...AAGGACCTCACCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR TCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAATTCGCCGGTCCTGCTaGGTGCGTTTCCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISIRRSC*VRFLCR
Trigger: TCTGCAGAGGAAACGCACTCAGCAGGACCGGCGAAT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAAGCTTCCTCAGCTCCTaGCGCATCAGCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISSFLSS*RISSST
Trigger: GGTGGATGAGCTGATGCGTCAGGAGCTGAGGAAGCT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCTGTGCCCCATTCCTaGCAGGATATTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQASVPHS*QDICPA
Trigger: TGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGA...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp CTCTATCATACGCTTCCAGAGCACATAGCGGGATGCGTAGTCAGGCCGGGGCATGCTGGGTCGGCTGGATaGCCCGGGCCTCTATCATAC +
Preference number: 4 (lower is better)
Translates to: LYHTLPEHIAGCVVRPGHAGSAG*PGPLSY
Trigger: GTATGATAGAGGCCCGGGGCATCCAGCCGACCCAGC...ATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTCTGGAAGCGTATGATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCGCACAGTGGTGGACTaGTCCAGCAGGAAGTATTTG +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALARTVVD*SSRKYL
Trigger: CAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGAGATGATGCTCAGGTaGTCTACCTGGTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPEMMLR*STWLGE
Trigger: CTCACCCAACCAGGTAGAGCACCTGAGCATCATCTC...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCCCATCCTGTGTTTCATaGTCTTCTTGCCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAPSCVS*SSCPVG
Trigger: CCCCACTGGGCAAGAAGAGCATGAAACACAGGATGG...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TTGTCCCAATCAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCAAGGCCTTGGAGTGGGGCCATGATGTaGATATCCGGGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LSQSASHGLRESAAARPWSGAMM*ISGEPS
Trigger: GCTTGGCTCCCCGGATATCCACATCATGGCCCCACT...CCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGATTGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCGATGGAGCGGATGAGTaGGGCCATGATGTGGATATC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALADGADE*GHDVDI
Trigger: GATATCCACATCATGGCCCCACTCATCCGCTCCATC...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAAGCAGAAGCTGCTCTTaGTCCAGCAGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISSRSCS*SSSSCR
Trigger: CCTGCAGGAGCTGCTGGACCAAGAGCAGCTTCTGCT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCAACCTCCAGGTCAGCTaGGGTGAGCTTGAAATCCTG +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALANLQVS*GELEIL
Trigger: CAGGATTTCAAGCTCACCCCAGCTGACCTGGAGGTT...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCTTCTGGGAGGACACTaGCTCCAGTCTGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPLLGGH*LQSGQD
Trigger: ATCCTGTCCAGACTGGAGCCAGTGTCCTCCCAGAAG...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCCTGTAAAGCTCTTCTaGGAGGACACTGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALAPVKLF*EDTGSS
Trigger: ACTGGAGCCAGTGTCCTCCCAGAAGAGCTTTACAGG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCCCAGGTGTTTTCTTTaGAGCCCTCAGGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPPRCFL*SPQGSF
Trigger: GAAAGACCCCTGAGGGCTCCAAAGAAAACACCTGGG...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCCTCGGCCTCCAACTaGTCCATCCTGTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQASSASN*SILCFM
Trigger: CATGAAACACAGGATGGACCAGTTGGAGGCCGAGGA...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCACTGCTTGGCCCTGACTaGACTTGTGCCATCCATCCT +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISLLGPD*TCAIHP
Trigger: AGGATGGATGGCACAAGTTCAGTCAGGGCCAAGCAG...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCTGTATGGTGACAGCTaGTTGGCCCTGACTGAACTT +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALALYGDS*LALTEL
Trigger: AAGTTCAGTCAGGGCCAAGCAGCTGTCACCATACAG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGTCTGACTGGGGTGTATaGTCTCACACCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPSDWGV*SHTGSS
Trigger: GGAAGAACCGGTGTGAGAGCATACACCCCAGTCAGA...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp GCATCTCGGCCAGCTGTGGCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTCACAGGTCGAACAGGTTaGCGCCAGTTTCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: ASRPAVAGRLSQSASHGLTGRTG*RQFLCT
Trigger: TGTGCACAGAAACTGGCGCCAACCTGTTCGACCTGT...GAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCGAAGTATTTGGGGATTaGAACCTCCAGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQAEVFGD*NLQVSW
Trigger: CCAGCTGACCTGGAGGTTCCAATCCCCAAATACTTC...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAACACTGGCTCCAGTCTaGACAGGATCTCGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISTLAPV*TGSRPV
Trigger: TACTGGCCGAGATCCTGTCCAGACTGGAGCCAGTGT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAATCCTCCACGAGGCATaGCTGGGAGATGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISILHEA*LGDDAQ
Trigger: CTGAGCATCATCTCCCAGCCATGCCTCGTGGAGGAT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCGGCCAGTAAGGTCATaGCACTCGATAAACCACTGT +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALARPVRS*HSINHC
Trigger: ACAGTGGTTTATCGAGTGCCATGACCTTACTGGCCG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCCTCCACAGACCTGTCTaGGGTCAGATCTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQALHRPV*GQIFFL
Trigger: AAGGAAAAAGATCTGACCTCAGACAGGTCTGTGGAG...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGATGCACCATCATCTGTaGCCCATTCCTGCCAGGATA +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPMHHHL*PIPARI
Trigger: TATCCTGGCAGGAATGGGGCACAGATGATGGTGCAT...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGGCATTTATGCCTCTaGCCCATCCCTTTACCCTTG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISGHLCL*PIPLPL
Trigger: CAAGGGTAAAGGGATGGGGCAGAGGCATAAATGCCC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCATCTGGGCATTTATaGCTCTGCCCCATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQASSGHL*LCPIPL
Trigger: TAAAGGGATGGGGCAGAGGCATAAATGCCCAGATGA...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp AATCAGCATCACACGGTCTCCGGGAGTCAGCAGCCGCAAGGCCTTGGTGAGGTCGATGGAGCGGATGAGTaGGGCCATGATGTGGATATC +
Preference number: 4 (lower is better)
Translates to: NQHHTVSGSQQPQGLGEVDGADE*GHDVDI
Trigger: GATATCCACATCATGGCCCCACTCATCCGCTCCATC...GACCTCACCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCCAGCAGGAAGTATTTaGGGATTGGAACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPPAGSI*GLEPPG
Trigger: ACCTGGAGGTTCCAATCCCCAAATACTTCCTGCTGG...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGTCTACCAGAGAATCATaGGCCTTCACCATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPSTRES*AFTIAA
Trigger: GGCAGCAATGGTGAAGGCCCATGATTCTCTGGTAGA...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCAGGGATACATTTGGATaGCAACACTTGCAACACCGC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALARDTFG*QHLQHR
Trigger: GCGGTGTTGCAAGTGTTGCCATCCAAATGTATCCCT...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCATCAGCACCGATTGGATaGCTTGGAGAATGTGACCCG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISSAPIG*LGECDP
Trigger: CGGGTCACATTCTCCAAGCCATCCAATCGGTGCTGA...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCACTCCTCCCTGTACACTaGATCCAGCTTCACCAGTTG +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISLLPVH*IQLHQL
Trigger: CAACTGGTGAAGCTGGATCCAGTGTACAGGGAGGAG...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGCTCTTCTTGCCCAGTaGGGTCTTGAAGTACCAGTC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISALLAQ*GLEVPV
Trigger: GACTGGTACTTCAAGACCCCACTGGGCAAGAAGAGC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp GCATCTCGGCCAGCTGTGGCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTCTTGTTGCCACAGGTCTaGGAACCGCAAATGCCAAAA +
Preference number: 4 (lower is better)
Translates to: ASRPAVAGRLSQSASHGLLLPQV*EPQMPK
Trigger: TTTTGGCATTTGCGGTTCTCAGACCTGTGGCAACAA...GAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCCGAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR TCA 90 bp CAGCCGCAAGGCCTTGGTGAGGTCCTTCTTTATCCGCTTTGGGTCCATCTCCTTGCCGCAAGGCCTTGGTaGGGTCCTTCTTTATCCGCT +
Preference number: 4 (lower is better)
Translates to: QPQGLGEVLLYPLWVHLLAARPW*GPSLSA
Trigger: AGCGGATAAAGAAGGACCTCACCAAGGCCTTGCGGC...AAGGAGATGGACCCAAAGCGGATAAAGAAGGACCTCACCAAGGCCTTGCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCAGTTTCTGTGCACACTaGCTTGACCAGCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALASFCAH*LDQHLL
Trigger: AAGAAGATGCTGGTCAAGGCAGTGTGCACAGAAACT...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp GTAGTCAGGCCGGGGCATGAAGAGGATCCGCTCGTAGACCCGGCACAGACCCCGACCTTAAAGACTATATaGACCATCATCTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: VVRPGHEEDPLVDPAQTPTLKTI*TIICAP
Trigger: TGGGGCACAGATGATGGTGCATATAGTCTTTAAGGT...CGGGGTCTGTGCCGGGTCTACGAGCGGATCCTCTTCATGCCCCGGCCTGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAATGGCCTCAGTCCGGTaGATTCCTGTAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISMASVR*IPVKLF
Trigger: GAAGAGCTTTACAGGAATGCACCGGACTGAGGCCAT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCATTGGATGGCAACACTTaGAACACCGCATCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISLDGNT*NTASTS
Trigger: GGAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAA...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCTTTGCACTAGAATTATaGCCTCAGTCCGGTGCATTC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALAFALEL*PQSGAF
Trigger: GAATGCACCGGACTGAGGCCATAATTCTAGTGCAAA...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTTCCTCCTTGTCCACAGCCAGACGGAGCTTCCTCAGCTCCTGACGCATCAGCTCCCAGGTGTTTTCTTTaGAGCCCTCAGGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPPCPQPDGASSAPDASAPRCFL*SPQGSF
Trigger: GAAAGACCCCTGAGGGCTCCAAAGAAAACACCTGGG...AGCTGATGCGTCAGGAGCTGAGGAAGCTCCGTCTGGCTGTGGACAAGGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAACAGGGATGGCATaGGCAACTTCTTCACCAAAC +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPQTGMA*ATSSPN
Trigger: GTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTG...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCTATGTCAAACAGGGATaGCATGGGCAACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALAYVKQG*HGQLLH
Trigger: GTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATA...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTACCTTAAAGACTATATaGACCATCATCTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPTLKTI*TIICAP
Trigger: TGGGGCACAGATGATGGTGCATATAGTCTTTAAGGT...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCAACCACTGTCGGATTTaGTCCTTCATTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALANHCRI*SFIFSF
Trigger: GAAGGAGAAAATGAAGGAGCAAATCCGACAGTGGTT...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCTGTTCTCTTGCATCTaGATTTCCAGTTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: TLGPLPCPTPLISGARKPLFSCI*ISSSIL
Trigger: GAGAATGGAACTGGAAATGCAGATGCAAGAGAACAG...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCTTCTTTATCCGCTTTaGGTCCATCTCCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPLLYPL*VHLLVF
Trigger: GAAGACAAGGAGATGGACCCAAAGCGGATAAAGAAG...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGAGTCATAATTCTGACTaGGGTGTATGCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPSHNSD*GVCSHT
Trigger: GGTGTGAGAGCATACACCCCAGTCAGAATTATGACT...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCACCAAACTCAGAGTaGATCCAAGATACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: YPWATALSHATNLRCPQASPNSE*IQDTGS
Trigger: ACTTCCTGTATCTTGGATCCACTCTGAGTTTGGTGA...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR TCA 90 bp CTTCCTCCTTGTCCACAGCCAGACGGAGCTTCCTCAGCTCCTGACGCATCAGCTCTCCACAGACCTGTCTaGGGTCAGATCTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LPPCPQPDGASSAPDASALHRPV*GQIFFL
Trigger: AAGGAAAAAGATCTGACCTCAGACAGGTCTGTGGAG...AGCTGATGCGTCAGGAGCTGAGGAAGCTCCGTCTGGCTGTGGACAAGGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR GCA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGTTTAAGTATTCTTCATaGCCGGCACAGATCATAGGG +
Preference number: 4 (lower is better)
Translates to: SLYPWATALSHATNLRCPFKYSS*PAQIIG
Trigger: CCCTATGATCTGTGCCGGGCATGAAGAATACTTAAA...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp ACGCTTCCAGAGCACATAGCGGGATGCGTAGTCAGGCCGGGGCATGAAGAGGATAGTTTCTGTGCACACTaGCTTGACCAGCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLPEHIAGCVVRPGHEEDSFCAH*LDQHLL
Trigger: AAGAAGATGCTGGTCAAGGCAGTGTGCACAGAAACT...ATCCTCTTCATGCCCCGGCCTGACTACGCATCCCGCTATGTGCTCTGGAAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCTCTCCTTGTCTTCTTTaGGGGTCTTCTTATAGAAAT +
Preference number: 4 (lower is better)
Translates to: WATALSHATNLRCPQALASPCLL*GSSYRN
Trigger: ATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGA...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CCA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCACATTCTCACCTGTTCTaGCGTTTTGTCTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISHSHLF*RFVCKD
Trigger: ATCTTTGCAGACAAAACGCCAGAACAGGTGAGAATG...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR GCA 90 bp AAGGCCTTGGTGAGGTCCTTCTTTATCCGCTTTGGGTCCATCTCCTTGTCTTCTTCCTGCCAGGATATTTaGCCAGCAGGTTTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: KALVRSFFIRFGSISLSSSCQDI*PAGFPA
Trigger: CGCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGA...AGAAGACAAGGAGATGGACCCAAAGCGGATAAAGAAGGACCTCACCAAGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp GGATGCCCCGGGCCTCTATCATACGCTTCCAGAGCACATAGCGGGATGCGTAGTTCTCCTTGTCTTCTTTaGGGGTCTTCTTATAGAAAT +
Preference number: 4 (lower is better)
Translates to: GCPGPLSYASRAHSGMRSSPCLL*GSSYRN
Trigger: ATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGA...ACTACGCATCCCGCTATGTGCTCTGGAAGCGTATGATAGAGGCCCGGGGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR GCA 90 bp CTCTTCCTTAGAAGGCCAGAAATAACAAGCTCTTCGTACAGAGACTCCACAGACTCTGACTGGGGTGTATaGTCTCACACCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LFLRRPEITSSSYRDSTDSDWGV*SHTGSS
Trigger: GGAAGAACCGGTGTGAGAGCATACACCCCAGTCAGA...GTCTGTGGAGTCTCTGTACGAAGAGCTTGTTATTTCTGGCCTTCTAAGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR TCA 90 bp GATACAGGAAGTCACCTATGTAGTCTTTCAATGCTACTGACTCACTCTTCCTTAAGCTTCCTCAGCTCCTaGCGCATCAGCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: DTGSHLCSLSMLLTHSSLSFLSS*RISSST
Trigger: GGTGGATGAGCTGATGCGTCAGGAGCTGAGGAAGCT...TAAGGAAGAGTGAGTCAGTAGCATTGAAAGACTACATAGGTGACTTCCTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR GCA 90 bp GGCAACTTCTTCACCAAACTCAGAGTGGATCCAAGATACAGGAAGTCACCTATGTTGGATGGCAACACTTaGAACACCGCATCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GNFFTKLRVDPRYRKSPMLDGNT*NTASTS
Trigger: GGAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAA...CATAGGTGACTTCCTGTATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CCA 90 bp CCGCTTTGGGTCCATCTCCTTGTCTTCTTTGGGGGTCTTCTTATAGAAATTCTTGCAAATGCCAAAAGCTaGGGGCTCCGGACCTTAAAG +
Preference number: 4 (lower is better)
Translates to: PLWVHLLVFFGGLLIEILANAKS*GLRTLK
Trigger: CTTTAAGGTCCGGAGCCCCCAGCTTTTGGCATTTGC...AAGAATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAAGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp CAAAGCCACATTCTGTCGTATGTCAAACAGGGATGGCATGGGCAACTTCTTCACAGGGATACATTTGGATaGCAACACTTGCAACACCGC +
Preference number: 4 (lower is better)
Translates to: QSHILSYVKQGWHGQLLHRDTFG*QHLQHR
Trigger: GCGGTGTTGCAAGTGTTGCCATCCAAATGTATCCCT...GTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CCA 90 bp TTCCTTAGAAGGCCAGAAATAACAAGCTCTTCGTACAGAGACTCCACAGACCTGGGAGAAGCCCCCAGATaGAATTCAAACCGAAGATCC +
Preference number: 4 (lower is better)
Translates to: FLRRPEITSSSYRDSTDLGEAPR*NSNRRS
Trigger: GGATCTTCGGTTTGAATTCCATCTGGGGGCTTCTCC...CAGGTCTGTGGAGTCTCTGTACGAAGAGCTTGTTATTTCTGGCCTTCTAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR GCA 90 bp CCGCTTTGGGTCCATCTCCTTGTCTTCTTTGGGGGTCTTCTTATAGAAATTCTTATGCACCATCATCTGTaGCCCATTCCTGCCAGGATA +
Preference number: 4 (lower is better)
Translates to: PLWVHLLVFFGGLLIEILMHHHL*PIPARI
Trigger: TATCCTGGCAGGAATGGGGCACAGATGATGGTGCAT...AAGAATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAAGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CCA 90 bp TTCCTTAGAAGGCCAGAAATAACAAGCTCTTCGTACAGAGACTCCACAGACCTGCAAACAGGGATGGCATaGGCAACTTCTTCACCAAAC +
Preference number: 4 (lower is better)
Translates to: FLRRPEITSSSYRDSTDLQTGMA*ATSSPN
Trigger: GTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTG...CAGGTCTGTGGAGTCTCTGTACGAAGAGCTTGTTATTTCTGGCCTTCTAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR GCA 90 bp CGCATACAAAGCCACATTCTGTCGTATGTCAAACAGGGATGGCATGGGCAACTTTTTAAGTATTCTTCATaGCCGGCACAGATCATAGGG +
Preference number: 4 (lower is better)
Translates to: RIQSHILSYVKQGWHGQLFKYSS*PAQIIG
Trigger: CCCTATGATCTGTGCCGGGCATGAAGAATACTTAAA...AAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTGGCTTTGTATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CCA 90 bp TTCCTTAGAAGGCCAGAAATAACAAGCTCTTCGTACAGAGACTCCACAGACCTGAGTCATAATTCTGACTaGGGTGTATGCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: FLRRPEITSSSYRDSTDLSHNSD*GVCSHT
Trigger: GGTGTGAGAGCATACACCCCAGTCAGAATTATGACT...CAGGTCTGTGGAGTCTCTGTACGAAGAGCTTGTTATTTCTGGCCTTCTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CCA 90 bp AGCCACATTCTGTCGTATGTCAAACAGGGATGGCATGGGCAACTTCTTCACCAATCACCAAACTCAGAGTaGATCCAAGATACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SHILSYVKQGWHGQLLHQSPNSE*IQDTGS
Trigger: ACTTCCTGTATCTTGGATCCACTCTGAGTTTGGTGA...TTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CCA 90 bp GGCAACTTCTTCACCAAACTCAGAGTGGATCCAAGATACAGGAAGTCACCTATGTATGTCAAACAGGGATaGCATGGGCAACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GNFFTKLRVDPRYRKSPMYVKQG*HGQLLH
Trigger: GTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATA...CATAGGTGACTTCCTGTATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CCA 90 bp CCGCTTTGGGTCCATCTCCTTGTCTTCTTTGGGGGTCTTCTTATAGAAATTCTTCTTCTTTATCCGCTTTaGGTCCATCTCCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PLWVHLLVFFGGLLIEILLLYPL*VHLLVF
Trigger: GAAGACAAGGAGATGGACCCAAAGCGGATAAAGAAG...AAGAATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAAGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS TCA 90 bp CCAGGCAGTGGTTCTCACACAGGTCGGCGCGCACCAGCTCGTCCTTaGGCTCCAGCACGCGGCCCGCCACGCCGTCCAGCAGGCGTCGCA +
Preference number: 5 (lower is better)
Translates to: PGSGSHTGRRAPARP*APARGPPRRPAGVA
Trigger: TGCGACGCCTGCTGGACGGCGTGGCGGGCCGCGTGCTGGAGCTCAAGGACGAGCTGGTGCGCGCCGACCTGTGTGAGAACCACTGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp GGTGTCGAAGCGGCGCAGCAGCCCCAGGTAGTGCAGGTAGAGCGATaGGAGCCTGTACTGGAAGGACTGCCGCTCCCGGTCGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GVEAAQQPQVVQVER*EPVLEGLPLPVGRR
Trigger: CCTGCGCCCGACCGGGAGCGGCAGTCCTTCCAGTACAGGCTCGCATCGCTCTACCTGCACTACCTGGGGCTGCTGCGCCGCTTCGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp GACTGCCGCTCCCGGTCGGGCGCAGGTTCGAGCAGAAGCTGCTCTTaGTCCAGCAGCTCCTGCAGGGTCGCGTGGGAGGACTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: DCRSRSGAGSSRSCS*SSSSCRVAWEDSQR
Trigger: CCTCTGGGAGTCCTCCCACGCGACCCTGCAGGAGCTGCTGGACCAAGAGCAGCTTCTGCTCGAACCTGCGCCCGACCGGGAGCGGCAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp TGGAAGGACTGCCGCTCCCGGTCGGGCGCAGGTTCGAGCAGAAGCTaGTCTTGGTCCAGCAGCTCCTGCAGGGTCGCGTGGGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: WKDCRSRSGAGSSRS*SWSSSSCRVAWEDS
Trigger: GGAGTCCTCCCACGCGACCCTGCAGGAGCTGCTGGACCAAGAGCAGCTTCTGCTCGAACCTGCGCCCGACCGGGAGCGGCAGTCCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCCGCACCAGCTCGTCCTaGAGCTCCAGCACGCGGCCC +
Preference number: 5 (lower is better)
Translates to: YPWATALSHATNLRCPQARTSSS*SSSTRP
Trigger: GGGCCGCGTGCTGGAGCTCAAGGACGAGCTGGTGCG...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGGCTCGAAGCCGGCCTaGCCTCGCCCGCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPGSKPA*PRPLCL
Trigger: AAGGCAGAGCGGGCGAGGCAAGGCCGGCTTCGAGCC...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGCCACCAGGGGCCGCTaGGACAGTTGCAGGAACCGC +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPATRGR*DSCRNR
Trigger: GCGGTTCCTGCAACTGTCCAAGCGGCCCCTGGTGGC...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTCCCATCCCTTTACCCTaGGGCCACTGCCCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPPIPLP*GHCPVP
Trigger: TGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGG...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 90 bp GAATGTGACCCGGCGTGTAGCCATCGGAGACCTTGGCTAGGGCACTaGTGTCCAGGTGCTGGGTCGGCTGGATGCCCCGGGCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: ECDPACSHRRPWLGH*CPGAGSAGCPGPLS
Trigger: TGATAGAGGCCCGGGGCATCCAGCCGACCCAGCACCTGGACATCAGTGCCCTAGCCAAGGTCTCCGATGGCTACACGCCGGGTCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp TCAGCTGGGGTGAGCTTGAAATCCTGCAGCACGCGGTCCAGGCAGTaGTTCTCACACAGGTCGGCGCGCACCAGCTCGTCCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SAGVSLKSCSTRSRQ*FSHRSARTSSSLSS
Trigger: GGAGCTCAAGGACGAGCTGGTGCGCGCCGACCTGTGTGAGAACCACTGCCTGGACCGCGTGCTGCAGGATTTCAAGCTCACCCCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp CTCGTAGACCCGGCACAGACCCCGCATCTCGGCCAGCTGTGGCCGGGAGGTTGTTTCCTGCCAGGATATTaGCCCAGCAGGTTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: LVDPAQTPHLGQLWPGGCFLPGY*PSRFSG
Trigger: GCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAA...ACAACCTCCCGGCCACAGCTGGCCGAGATGCGGGGTCTGTGCCGGGTCTACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CAA 90 bp GGCCAGCTGTGGCCGGGAGGTTGTCCCAATCAGCATCACACGGTCTCCGGGAGTGCTGTGGCCGGGAGGTaGTCCCAATCAGCATCACAC +
Preference number: 5 (lower is better)
Translates to: GQLWPGGCPNQHHTVSGSAVAGR*SQSASH
Trigger: GTGTGATGCTGATTGGGACAACCTCCCGGCCACAGC...ACTCCCGGAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACAGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGCTGTGGCCGGGAGGTaGTCCCAATCAGCATCACAC +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPAVAGR*SQSASH
Trigger: GTGTGATGCTGATTGGGACAACCTCCCGGCCACAGC...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCCATGGGCCTTCACCATaGCTGCCCGGAACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: YPWATALSHATNLRCPQAHGPSP*LPGTPP
Trigger: AGGAGGAGTTCCGGGCAGCAATGGTGAAGGCCCATG...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGGCCGCTTGGACAGTaGCAGGAACCGCCGCTCACT +
Preference number: 5 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISGPLGQ*QEPPLT
Trigger: AGTGAGCGGCGGTTCCTGCAACTGTCCAAGCGGCCC...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTTCTCCTTGTCCAGCTaGGCCTCCTCGGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPFSLSS*ASSASN
Trigger: GTTGGAGGCCGAGGAGGCCAAGCTGGACAAGGAGAA...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTGGTCTTTCTTCCTCCTaGTCCACAGCCAGACGGAGC +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPGLSSS*STARRS
Trigger: GCTCCGTCTGGCTGTGGACAAGGAGGAAGAAAGACC...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCCACCGATTGGATGGCTaGGAGAATGTGACCCGGCGT +
Preference number: 5 (lower is better)
Translates to: YPWATALSHATNLRCPQAHRLDG*ENVTRR
Trigger: ACGCCGGGTCACATTCTCCAAGCCATCCAATCGGTG...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 90 bp TCTGGCGGAGCCTCTGGACATCCTCCACGAGGCATGGCTGGGAGATaGTGCTCAGGTGCTCTACCTGGTTGGGTGAGGGGAGCATGCCAA +
Preference number: 5 (lower is better)
Translates to: SGGASGHPPRGMAGR*CSGALPGWVRGACQ
Trigger: TTGGCATGCTCCCCTCACCCAACCAGGTAGAGCACCTGAGCATCATCTCCCAGCCATGCCTCGTGGAGGATGTCCAGAGGCTCCGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp AGTTGTCCCAGGAACTCAGAGGCCACCAGGGGCCGCTTGGACAGTTaGAGGAACCGCCGCTCACTCAGCACCGATTGGATGGCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SCPRNSEATRGRLDS*RNRRSLSTDWMAWR
Trigger: TCTCCAAGCCATCCAATCGGTGCTGAGTGAGCGGCGGTTCCTGCAACTGTCCAAGCGGCCCCTGGTGGCCTCTGAGTTCCTGGGACAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp TTCTCCATCTGGCGGAGCCTCTGGACATCCTCCACGAGGCATGGCTaGGAGATGATGCTCAGGTGCTCTACCTGGTTGGGTGAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: FSIWRSLWTSSTRHG*EMMLRCSTWLGEGS
Trigger: GCTCCCCTCACCCAACCAGGTAGAGCACCTGAGCATCATCTCCCAGCCATGCCTCGTGGAGGATGTCCAGAGGCTCCGCCAGATGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp TGGGCCTTCACCATTGCTGCCCGGAACTCCTCCTCTTTCTCCATCTaGCGGAGCCTCTGGACATCCTCCACGAGGCATGGCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: WAFTIAARNSSSFSI*RSLWTSSTRHGWEM
Trigger: CATCTCCCAGCCATGCCTCGTGGAGGATGTCCAGAGGCTCCGCCAGATGGAGAAAGAGGAGGAGTTCCGGGCAGCAATGGTGAAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGGACAGGTCGAACAGGTaGGCGCCAGTTTCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: SLYPWATALSHATNLRCPDRSNR*APVSVH
Trigger: GTGCACAGAAACTGGCGCCAACCTGTTCGACCTGTC...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTTCCTGCCAGGATATTaGCCCAGCAGGTTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPFLPGY*PSRFSG
Trigger: GCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAA...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCAAGCTCCCTCAGACATaGTGTCCACTCCTCCACGCT +
Preference number: 5 (lower is better)
Translates to: YPWATALSHATNLRCPQAKLPQT*CPLLHA
Trigger: AGCGTGGAGGAGTGGACACAATGTCTGAGGGAGCTT...GGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAAGGTGCTCTACCTGGTaGGGTGAGGGGAGCATGCCA +
Preference number: 5 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISRCSTW*GEGSMP
Trigger: TGGCATGCTCCCCTCACCCAACCAGGTAGAGCACCT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 90 bp CCCGAATCCTCCCATCCTGCTCCTCATCTCTTCGAATCTCTCGCATaGAGGTGGCTCGAAGCCGGCCTTGCCTCGCCCGCTCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: PESSHPAPHLFESLA*RWLEAGLASPALPF
Trigger: AAAAGGCAGAGCGGGCGAGGCAAGGCCGGCTTCGAGCCACCTTCATGCGAGAGATTCGAAGAGATGAGGAGCAGGATGGGAGGATTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp GCTTGGACAGTTGCAGGAACCGCCGCTCACTCAGCACCGATTGGATaGCTTGGAGAATGTGACCCGGCGTGTAGCCATCGGAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: AWTVAGTAAHSAPIG*LGECDPACSHRRPW
Trigger: CCAAGGTCTCCGATGGCTACACGCCGGGTCACATTCTCCAAGCCATCCAATCGGTGCTGAGTGAGCGGCGGTTCCTGCAACTGTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTCCAGCAGGAAGTATTaGGGGATTGGAACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPSSRKY*GIGTSR
Trigger: CCTGGAGGTTCCAATCCCCAAATACTTCCTGCTGGA...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCTCACTCAGCACCGATaGGATGGCTTGGAGAATGTG +
Preference number: 5 (lower is better)
Translates to: WATALSHATNLRCPQALALTQHR*DGLENV
Trigger: CACATTCTCCAAGCCATCCAATCGGTGCTGAGTGAG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGTTGCCCAGTGGGGTCTaGAAGTACCAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLYPWATALSHATNLRCPLPSGV*KYQSFR
Trigger: CCTGAAGGACTGGTACTTCAAGACCCCACTGGGCAA...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp AGGCCCCTCTGTCTCTACCAGAGAATCATGGGCCTTCACCATTGCTaGCCGGAACTCCTCCTCTTTCTCCATCTGGCGGAGCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: RPLCLYQRIMGLHHC*PELLLFLHLAEPLD
Trigger: GTCCAGAGGCTCCGCCAGATGGAGAAAGAGGAGGAGTTCCGGGCAGCAATGGTGAAGGCCCATGATTCTCTGGTAGAGACAGAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp TGGACAGGATCTCGGCCAGTATCAGCCCTCGCTCCCGCACAGTGGTaGACTGCTCCAGCAGGAAGTATTTGGGGATTGGAACCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: WTGSRPVSALAPAQW*TAPAGSIWGLEPPG
Trigger: ACCTGGAGGTTCCAATCCCCAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGAGCGAGGGCTGATACTGGCCGAGATCCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp GTCTGGACAGGATCTCGGCCAGTATCAGCCCTCGCTCCCGCACAGTaGTGGACTGCTCCAGCAGGAAGTATTTGGGGATTGGAACCTCCA +
Preference number: 5 (lower is better)
Translates to: VWTGSRPVSALAPAQ*WTAPAGSIWGLEPP
Trigger: TGGAGGTTCCAATCCCCAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGAGCGAGGGCTGATACTGGCCGAGATCCTGTCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGGGAAGTATTTGGGGATaGGAACCTCCAGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SLYPWATALSHATNLRCPGSIWG*EPPGQL
Trigger: CAGCTGACCTGGAGGTTCCAATCCCCAAATACTTCC...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTTTGGATGGCAACACTaGCAACACCGCATCCACTTC +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPFGWQH*QHRIHF
Trigger: GAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAAA...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp CCTTGTCCACAGCCAGACGGAGCTTCCTCAGCTCCTGACGCATCAGCTCATCCAGGTCTTTCTTCCTCCTaGTCCACAGCCAGACGGAGC +
Preference number: 5 (lower is better)
Translates to: PCPQPDGASSAPDASAHPGLSSS*STARRS
Trigger: GCTCCGTCTGGCTGTGGACAAGGAGGAAGAAAGACC...TGGATGAGCTGATGCGTCAGGAGCTGAGGAAGCTCCGTCTGGCTGTGGACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CAA 90 bp TCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGTCCCAGGTGTTTTCTTaGGAGCCCTCAGGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SLYPWATALSHATNLRCPSQVFS*EPSGVF
Trigger: AAAGACCCCTGAGGGCTCCAAAGAAAACACCTGGGA...CGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAATCCAGCTTCACCAGTaGTCCCAGGAACTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISIQLHQ*SQELRG
Trigger: GCCTCTGAGTTCCTGGGACAACTGGTGAAGCTGGAT...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCTGTTTCATGCTCTTCTaGCCCAGTGGGGTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: WATALSHATNLRCPQALACFMLF*PSGVLK
Trigger: CTTCAAGACCCCACTGGGCAAGAAGAGCATGAAACA...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp CTCTGGACATCCTCCACGAGGCATGGCTGGGAGATGATGCTCAGGTaGTCTACCTGGTTGGGTGAGGGGAGCATGCCAATGAACTCCATC +
Preference number: 5 (lower is better)
Translates to: LWTSSTRHGWEMMLR*STWLGEGSMPMNSI
Trigger: GATGGAGTTCATTGGCATGCTCCCCTCACCCAACCAGGTAGAGCACCTGAGCATCATCTCCCAGCCATGCCTCGTGGAGGATGTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTAGCCCCTTCTTTATCCGCTTaGGGTCCATCTCCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: WATALSHATNLRCPQALAPSLSA*GPSPCL
Trigger: AAGACAAGGAGATGGACCCAAAGCGGATAAAGAAGG...GGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp CTGCCCCATCCCTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCATATGGTGACAGCTGCTaGGCCCTGACTGAACTTGTG +
Preference number: 5 (lower is better)
Translates to: LPHPFTLGPLPCPTPLISYGDSC*ALTELV
Trigger: CACAAGTTCAGTCAGGGCCAAGCAGCTGTCACCATA...TGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAGGGATGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp ATGAAGGTGGCTCGAAGCCGGCCTTGCCTCGCCCGCTCTGCCTTTTaGACTAGAATTATGGCCTCAGTCCGGTGCATTCCTGTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: MKVARSRPCLARSAF*TRIMASVRCIPVKL
Trigger: GAGCTTTACAGGAATGCACCGGACTGAGGCCATAATTCTAGTGCAAAAGGCAGAGCGGGCGAGGCAAGGCCGGCTTCGAGCCACCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp AGACTATATGCACCATCATCTGTGCCCCATTCCTGCCAGGATATTTaGCCAGCAGGTTTTCCGGCGACAGGTCGAACAGGTTGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: RLYAPSSVPHSCQDI*PAGFPATGRTGWRQ
Trigger: CTGGCGCCAACCTGTTCGACCTGTCGCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGATGATGGTGCATATAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611102.1
ENST00000615129.4
CDS GCA 90 bp TCATCTCTTCGAATCTCTCGCATGAAGGTGGCTCGAAGCCGGCCTTaGCTCGCCCGCTCTGCCTTTTGCACTAGAATTATGGCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: SSLRISRMKVARSRP*LARSAFCTRIMASV
Trigger: GACTGAGGCCATAATTCTAGTGCAAAAGGCAGAGCGGGCGAGGCAAGGCCGGCTTCGAGCCACCTTCATGCGAGAGATTCGAAGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTAAACCACTGTCGGATTaGCTCCTTCATTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPKPLSD*LLHFLL
Trigger: AAGGAGAAAATGAAGGAGCAAATCCGACAGTGGTTT...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp ACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTGCCCGCAAGCCTTTTTGTCTGCAAAGATaGAGTAGGATCCACCTGAAG +
Preference number: 5 (lower is better)
Translates to: TLGPLPCPTPLISGARKPFCLQR*SRIHLK
Trigger: CTTCAGGTGGATCCTACTCAATCTTTGCAGACAAAA...AGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp GTCTTTCTTCCTCCTTGTCCACAGCCAGACGGAGCTTCCTCAGCTCCTGACGCATCCCAGGTGTTTTCTTaGGAGCCCTCAGGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: VFLPPCPQPDGASSAPDASQVFS*EPSGVF
Trigger: AAAGACCCCTGAGGGCTCCAAAGAAAACACCTGGGA...TGCGTCAGGAGCTGAGGAAGCTCCGTCTGGCTGTGGACAAGGAGGAAGAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS GCA 90 bp AAGCTGGGGGCTCCGGACCTTAAAGACTATATGCACCATCATCTGTaGCCCATTCCTGCCAGGATATTTGCCCAGCAGGTTTTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: KLGAPDLKDYMHHHL*PIPARIFAQQVFRR
Trigger: TCGCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGATGATGGTGCATATAGTCTTTAAGGTCCGGAGCCCCCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS GCA 90 bp CTTTACCCTTGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTaGCCGCAAGCCTTAGCCATCACTTCCTTTTCTTCTTCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LYPWATALSHATNLR*PQALAITSFSSSPC
Trigger: ACAAGGAGAAGAAGAAAAGGAAGTGATGGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCAAGGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 90 bp CCCTCCTTTGTTGCCACAGGTCTGAGAACCGCAAATGCCAAAAGCTaGGGGCTCCGGACCTTAAAGACTATATGCACCATCATCTGTGCC +
Preference number: 5 (lower is better)
Translates to: PSFVATGLRTANAKS*GLRTLKTICTIICA
Trigger: GGCACAGATGATGGTGCATATAGTCTTTAAGGTCCGGAGCCCCCAGCTTTTGGCATTTGCGGTTCTCAGACCTGTGGCAACAAAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS CCA 90 bp ATTTTCTCCTTCATGTCAGGCCCCTCTGTCTCTACCAGAGAATCATaGGCCTTCACCATTGCTGCCCGGAACTCCTCCTCTTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: IFSFMSGPSVSTRES*AFTIAARNSSSFSI
Trigger: GATGGAGAAAGAGGAGGAGTTCCGGGCAGCAATGGTGAAGGCCCATGATTCTCTGGTAGAGACAGAGGGGCCTGACATGAAGGAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 90 bp AACCGGCCAGTAAGGTCATGGCACTCGATAAACCACTGTCGGATTTaGTCCTTCATTTTCTCCTTCATGTCAGGCCCCTCTGTCTCTACC +
Preference number: 5 (lower is better)
Translates to: NRPVRSWHSINHCRI*SFIFSFMSGPSVST
Trigger: GGTAGAGACAGAGGGGCCTGACATGAAGGAGAAAATGAAGGAGCAAATCCGACAGTGGTTTATCGAGTGCCATGACCTTACTGGCCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS-3UTR CAA 90 bp CCGCTTTGGGTCCATCTCCTTGTCTTCTTTGGGGGTCTTCTTATAGAAATTCTTGACAGGTCGAACAGGTaGGCGCCAGTTTCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: PLWVHLLVFFGGLLIEILDRSNR*APVSVH
Trigger: GTGCACAGAAACTGGCGCCAACCTGTTCGACCTGTC...AAGAATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS GCA 90 bp TCTCCTCCCGGAGGGTCTCGGAGTCATAATTCTGACTGGGGTGTATaGTCTCACACCGGTTCTTCCATGTATTTAAGTATTCTTCATGCC +
Preference number: 5 (lower is better)
Translates to: SPPGGSRSHNSDWGV*SHTGSSMYLSILHA
Trigger: GGCATGAAGAATACTTAAATACATGGAAGAACCGGTGTGAGAGCATACACCCCAGTCAGAATTATGACTCCGAGACCCTCCGGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS CCA 90 bp CTTTCCTCTTCTCCTCCCGGAGGGTCTCGGAGTCATAATTCTGACTaGGGTGTATGCTCTCACACCGGTTCTTCCATGTATTTAAGTATT +
Preference number: 5 (lower is better)
Translates to: LSSSPPGGSRSHNSD*GVCSHTGSSMYLSI
Trigger: AATACTTAAATACATGGAAGAACCGGTGTGAGAGCATACACCCCAGTCAGAATTATGACTCCGAGACCCTCCGGGAGGAGAAGAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS-3UTR CAA 90 bp CACATTCTGTCGTATGTCAAACAGGGATGGCATGGGCAACTTCTTCACCAAACTTTTGGATGGCAACACTaGCAACACCGCATCCACTTC +
Preference number: 5 (lower is better)
Translates to: HILSYVKQGWHGQLLHQTFGWQH*QHRIHF
Trigger: GAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAAA...AGTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACGACAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS-3UTR CAA 90 bp CCGCTTTGGGTCCATCTCCTTGTCTTCTTTGGGGGTCTTCTTATAGAAATTCTTTTTGGGTCCATCTCCTaGTCTTCTTTGGGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLWVHLLVFFGGLLIEILFGSIS*SSLGVF
Trigger: GAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAA...AAGAATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAAGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS CAA 90 bp TCCAGGCAGTGGTTCTCACACAGGTCGGCGCGCACCAGCTCGTCCTaGAGCTCCAGCACGCGGCCCGCCACGCCGTCCAGCAGGCGTCGC +
Preference number: 6 (lower is better)
Translates to: SRQWFSHRSARTSSS*SSSTRPATPSSRRR
Trigger: GCGACGCCTGCTGGACGGCGTGGCGGGCCGCGTGCTGGAGCTCAAGGACGAGCTGGTGCGCGCCGACCTGTGTGAGAACCACTGCCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 72 bp GGTTCTCACACAGGTCGGCGCGCACCAGCTCGTCCTTaGGCTCCAGCACGCGGCCCGCCACGCCGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GSHTGRRAPARP*APARGPPRRPA
Trigger: TGCTGGACGGCGTGGCGGGCCGCGTGCTGGAGCTCAAGGACGAGCTGGTGCGCGCCGACCTGTGTGAGAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 72 bp TGGTTCTCACACAGGTCGGCGCGCACCAGCTCGTCCTaGAGCTCCAGCACGCGGCCCGCCACGCCGTCCAGC +
Preference number: 6 (lower is better)
Translates to: WFSHRSARTSSS*SSSTRPATPSS
Trigger: GCTGGACGGCGTGGCGGGCCGCGTGCTGGAGCTCAAGGACGAGCTGGTGCGCGCCGACCTGTGTGAGAACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 72 bp CCGGCGTGTAGCCATCGGAGACCTTGGCTAGGGCACTaGTGTCCAGGTGCTGGGTCGGCTGGATGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: PACSHRRPWLGH*CPGAGSAGCPG
Trigger: CCCGGGGCATCCAGCCGACCCAGCACCTGGACATCAGTGCCCTAGCCAAGGTCTCCGATGGCTACACGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp GCGGCGCAGCAGCCCCAGGTAGTGCAGGTAGAGCGATaGGAGCCTGTACTGGAAGGACTGCCGCTCCCGGTC +
Preference number: 6 (lower is better)
Translates to: AAQQPQVVQVER*EPVLEGLPLPV
Trigger: GACCGGGAGCGGCAGTCCTTCCAGTACAGGCTCGCATCGCTCTACCTGCACTACCTGGGGCTGCTGCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp GGTTCGAGCAGAAGCTGCTCTTGGTCCAGCAGCTCCTaGAGGGTCGCGTGGGAGGACTCCCAGAGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: GSSRSCSWSSSS*RVAWEDSQRRW
Trigger: CCAGCGCCTCTGGGAGTCCTCCCACGCGACCCTGCAGGAGCTGCTGGACCAAGAGCAGCTTCTGCTCGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp GTGAGCTTGAAATCCTGCAGCACGCGGTCCAGGCAGTaGTTCTCACACAGGTCGGCGCGCACCAGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: VSLKSCSTRSRQ*FSHRSARTSSS
Trigger: GGACGAGCTGGTGCGCGCCGACCTGTGTGAGAACCACTGCCTGGACCGCGTGCTGCAGGATTTCAAGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp TCGGAGACCTTGGCTAGGGCACTGATGTCCAGGTGCTaGGTCGGCTGGATGCCCCGGGCCTCTATCATACGC +
Preference number: 6 (lower is better)
Translates to: SETLARALMSRC*VGWMPRASIIR
Trigger: GCGTATGATAGAGGCCCGGGGCATCCAGCCGACCCAGCACCTGGACATCAGTGCCCTAGCCAAGGTCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 90 bp GGGCCGCTTGGACAGTTGCAGGAACCGCCGCTCACTCAGCACCGATaGGATGGCTTGGAGAATGTGACCCGGCGTGTAGCCATCGGAGAC +
Preference number: 6 (lower is better)
Translates to: GPLGQLQEPPLTQHR*DGLENVTRRVAIGD
Trigger: GTCTCCGATGGCTACACGCCGGGTCACATTCTCCAAGCCATCCAATCGGTGCTGAGTGAGCGGCGGTTCCTGCAACTGTCCAAGCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 90 bp CAGTTGTCCCAGGAACTCAGAGGCCACCAGGGGCCGCTTGGACAGTaGCAGGAACCGCCGCTCACTCAGCACCGATTGGATGGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: QLSQELRGHQGPLGQ*QEPPLTQHRLDGLE
Trigger: CTCCAAGCCATCCAATCGGTGCTGAGTGAGCGGCGGTTCCTGCAACTGTCCAAGCGGCCCCTGGTGGCCTCTGAGTTCCTGGGACAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp CCATCGGAGACCTTGGCTAGGGCACTGATGTCCAGGTaGTGGGTCGGCTGGATGCCCCGGGCCTCTATCATA +
Preference number: 6 (lower is better)
Translates to: PSETLARALMSR*WVGWMPRASII
Trigger: TATGATAGAGGCCCGGGGCATCCAGCCGACCCAGCACCTGGACATCAGTGCCCTAGCCAAGGTCTCCGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp TTGGCTAGGGCACTGATGTCCAGGTGCTGGGTCGGCTaGATGCCCCGGGCCTCTATCATACGCTTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: LARALMSRCWVG*MPRASIIRFQS
Trigger: GCTCTGGAAGCGTATGATAGAGGCCCGGGGCATCCAGCCGACCCAGCACCTGGACATCAGTGCCCTAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 72 bp TCCCATCCTGCTCCTCATCTCTTCGAATCTCTCGCATaGAGGTGGCTCGAAGCCGGCCTTGCCTCGCCCGCT +
Preference number: 6 (lower is better)
Translates to: SHPAPHLFESLA*RWLEAGLASPA
Trigger: AGCGGGCGAGGCAAGGCCGGCTTCGAGCCACCTTCATGCGAGAGATTCGAAGAGATGAGGAGCAGGATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp GGAACCTCCAGGTCAGCTGGGGTGAGCTTGAAATCCTaGAGCACGCGGTCCAGGCAGTGGTTCTCACACAGG +
Preference number: 6 (lower is better)
Translates to: GTSRSAGVSLKS*STRSRQWFSHR
Trigger: CCTGTGTGAGAACCACTGCCTGGACCGCGTGCTGCAGGATTTCAAGCTCACCCCAGCTGACCTGGAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp ACCAGGAGGATGGAGCGGATGAGTGGGGCCATGATGTaGATATCCGGGGAGCCAAGCCGAAGGACCGCATAC +
Preference number: 6 (lower is better)
Translates to: TRRMERMSGAMM*ISGEPSRRTAY
Trigger: GTATGCGGTCCTTCGGCTTGGCTCCCCGGATATCCACATCATGGCCCCACTCATCCGCTCCATCCTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611102.1
ENST00000615129.4
CDS CCA 72 bp ACCATTGCTGCCCGGAACTCCTCCTCTTTCTCCATCTaGCGGAGCCTCTGGACATCCTCCACGAGGCATGGC +
Preference number: 6 (lower is better)
Translates to: TIAARNSSSFSI*RSLWTSSTRHG
Trigger: GCCATGCCTCGTGGAGGATGTCCAGAGGCTCCGCCAGATGGAGAAAGAGGAGGAGTTCCGGGCAGCAATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp GTTGCAGGAACCGCCGCTCACTCAGCACCGATTGGATaGCTTGGAGAATGTGACCCGGCGTGTAGCCATCGG +
Preference number: 6 (lower is better)
Translates to: VAGTAAHSAPIG*LGECDPACSHR
Trigger: CCGATGGCTACACGCCGGGTCACATTCTCCAAGCCATCCAATCGGTGCTGAGTGAGCGGCGGTTCCTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 72 bp CAGGAACCGCCGCTCACTCAGCACCGATTGGATGGCTaGGAGAATGTGACCCGGCGTGTAGCCATCGGAGAC +
Preference number: 6 (lower is better)
Translates to: QEPPLTQHRLDG*ENVTRRVAIGD
Trigger: GTCTCCGATGGCTACACGCCGGGTCACATTCTCCAAGCCATCCAATCGGTGCTGAGTGAGCGGCGGTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 72 bp GGACAGTTGCAGGAACCGCCGCTCACTCAGCACCGATaGGATGGCTTGGAGAATGTGACCCGGCGTGTAGCC +
Preference number: 6 (lower is better)
Translates to: GQLQEPPLTQHR*DGLENVTRRVA
Trigger: GGCTACACGCCGGGTCACATTCTCCAAGCCATCCAATCGGTGCTGAGTGAGCGGCGGTTCCTGCAACTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp GCTCGAAGCCGGCCTTGCCTCGCCCGCTCTGCCTTTTaGACTAGAATTATGGCCTCAGTCCGGTGCATTCCT +
Preference number: 6 (lower is better)
Translates to: ARSRPCLARSAF*TRIMASVRCIP
Trigger: AGGAATGCACCGGACTGAGGCCATAATTCTAGTGCAAAAGGCAGAGCGGGCGAGGCAAGGCCGGCTTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp TCCTCCACGAGGCATGGCTGGGAGATGATGCTCAGGTaGTCTACCTGGTTGGGTGAGGGGAGCATGCCAATG +
Preference number: 6 (lower is better)
Translates to: SSTRHGWEMMLR*STWLGEGSMPM
Trigger: CATTGGCATGCTCCCCTCACCCAACCAGGTAGAGCACCTGAGCATCATCTCCCAGCCATGCCTCGTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp GGATCTCGGCCAGTATCAGCCCTCGCTCCCGCACAGTaGTGGACTGCTCCAGCAGGAAGTATTTGGGGATTG +
Preference number: 6 (lower is better)
Translates to: GSRPVSALAPAQ*WTAPAGSIWGL
Trigger: CAATCCCCAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGAGCGAGGGCTGATACTGGCCGAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp CGGAACTCCTCCTCTTTCTCCATCTGGCGGAGCCTCTaGACATCCTCCACGAGGCATGGCTGGGAGATGATG +
Preference number: 6 (lower is better)
Translates to: RNSSSFSIWRSL*TSSTRHGWEMM
Trigger: CATCATCTCCCAGCCATGCCTCGTGGAGGATGTCCAGAGGCTCCGCCAGATGGAGAAAGAGGAGGAGTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 72 bp TTGCCCAGCAGGTTTTCCGGCGACAGGTCGAACAGGTaGGCGCCAGTTTCTGTGCACACTGCCTTGACCAGC +
Preference number: 6 (lower is better)
Translates to: LPSRFSGDRSNR*APVSVHTALTS
Trigger: GCTGGTCAAGGCAGTGTGCACAGAAACTGGCGCCAACCTGTTCGACCTGTCGCCGGAAAACCTGCTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611102.1
ENST00000615129.4
CDS CAA 72 bp TCCCGCACAGTGGTGGACTGCTCCAGCAGGAAGTATTaGGGGATTGGAACCTCCAGGTCAGCTGGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: SRTVVDCSSRKY*GIGTSRSAGVS
Trigger: GCTCACCCCAGCTGACCTGGAGGTTCCAATCCCCAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 90 bp AGCCCTCGCTCCCGCACAGTGGTGGACTGCTCCAGCAGGAAGTATTaGGGGATTGGAACCTCCAGGTCAGCTGGGGTGAGCTTGAAATCC +
Preference number: 6 (lower is better)
Translates to: SPRSRTVVDCSSRKY*GIGTSRSAGVSLKS
Trigger: GGATTTCAAGCTCACCCCAGCTGACCTGGAGGTTCCAATCCCCAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGAGCGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 72 bp TCCTTGTCCACAGCCAGACGGAGCTTCCTCAGCTCCTaGCGCATCAGCTCATCCACCTGTATCCGGATCTCC +
Preference number: 6 (lower is better)
Translates to: SLSTARRSFLSS*RISSSTCIRIS
Trigger: GGAGATCCGGATACAGGTGGATGAGCTGATGCGTCAGGAGCTGAGGAAGCTCCGTCTGGCTGTGGACAAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp TCTCGGCCAGTATCAGCCCTCGCTCCCGCACAGTGGTaGACTGCTCCAGCAGGAAGTATTTGGGGATTGGAA +
Preference number: 6 (lower is better)
Translates to: SRPVSALAPAQW*TAPAGSIWGLE
Trigger: TTCCAATCCCCAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGAGCGAGGGCTGATACTGGCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp GCACCATCATCTGTGCCCCATTCCTGCCAGGATATTTaGCCAGCAGGTTTTCCGGCGACAGGTCGAACAGGT +
Preference number: 6 (lower is better)
Translates to: APSSVPHSCQDI*PAGFPATGRTG
Trigger: ACCTGTTCGACCTGTCGCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGATGATGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611102.1
ENST00000615129.4
CDS GCA 72 bp CGAATCTCTCGCATGAAGGTGGCTCGAAGCCGGCCTTaGCTCGCCCGCTCTGCCTTTTGCACTAGAATTATG +
Preference number: 6 (lower is better)
Translates to: RISRMKVARSRP*LARSAFCTRIM
Trigger: CATAATTCTAGTGCAAAAGGCAGAGCGGGCGAGGCAAGGCCGGCTTCGAGCCACCTTCATGCGAGAGATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp TGGGCCACTGCCCTGTCCCACGCCACTAATCTCAGGTaGCCGCAAGCCTTAGCCATCACTTCCTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: WATALSHATNLR*PQALAITSFSS
Trigger: AGAAGAAAAGGAAGTGATGGCTAAGGCTTGCGGGCACCTGAGATTAGTGGCGTGGGACAGGGCAGTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp CCGGTGCATTCCTGTAAAGCTCTTCTGGGAGGACACTaGCTCCAGTCTGGACAGGATCTCGGCCAGTATCAG +
Preference number: 6 (lower is better)
Translates to: PVHSCKALLGGH*LQSGQDLGQYQ
Trigger: CTGATACTGGCCGAGATCCTGTCCAGACTGGAGCCAGTGTCCTCCCAGAAGAGCTTTACAGGAATGCACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 72 bp TGCACCATCATCTGTGCCCCATTCCTGCCAGGATATTaGCCCAGCAGGTTTTCCGGCGACAGGTCGAACAGG +
Preference number: 6 (lower is better)
Translates to: CTIICAPFLPGY*PSRFSGDRSNR
Trigger: CCTGTTCGACCTGTCGCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGATGATGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611102.1
ENST00000615129.4
CDS CAA 90 bp CCAGGATATTTGCCCAGCAGGTTTTCCGGCGACAGGTCGAACAGGTaGGCGCCAGTTTCTGTGCACACTGCCTTGACCAGCATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: PGYLPSRFSGDRSNR*APVSVHTALTSIFF
Trigger: GAAGAAGATGCTGGTCAAGGCAGTGTGCACAGAAACTGGCGCCAACCTGTTCGACCTGTCGCCGGAAAACCTGCTGGGCAAATATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611102.1
ENST00000615129.4
CDS TCA 72 bp TCCTGTGTTTCATGCTCTTCTTGCCCAGTGGGGTCTTaGAGTACCAGTCCTTCAGGGACTCCTCCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: SCVSCSSCPVGS*STSPSGTPPPP
Trigger: GGGAGGAGGAGGAGTCCCTGAAGGACTGGTACTTCAAGACCCCACTGGGCAAGAAGAGCATGAAACACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS TCA 72 bp AGCCCCCAGATGGAATTCAAACCGAAGATCCCCCGCTaGGGTCTTTGTGACCTGTATCCGGATCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: SPQMEFKPKIPR*GLCDLYPDLQL
Trigger: GAGCTGGAGATCCGGATACAGGTCACAAAGACCTCAGCGGGGGATCTTCGGTTTGAATTCCATCTGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613681.1
CDS CCA 72 bp TTCATGTCAGGCCCCTCTGTCTCTACCAGAGAATCATaGGCCTTCACCATTGCTGCCCGGAACTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: FMSGPSVSTRES*AFTIAARNSSS
Trigger: AGAGGAGGAGTTCCGGGCAGCAATGGTGAAGGCCCATGATTCTCTGGTAGAGACAGAGGGGCCTGACATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp TTCTCCTTGTCCAGCTTGGCCTCCTCGGCCTCCAACTaGTCCATCCTGTGTTTCATGCTCTTCTTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: FSLSSLASSASN*SILCFMLFLPS
Trigger: ACTGGGCAAGAAGAGCATGAAACACAGGATGGACCAGTTGGAGGCCGAGGAGGCCAAGCTGGACAAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 90 bp AAGACTATATGCACCATCATCTGTGCCCCATTCCTGCCAGGATATTaGCCCAGCAGGTTTTCCGGCGACAGGTCGAACAGGTTGGCGCCA +
Preference number: 6 (lower is better)
Translates to: KTICTIICAPFLPGY*PSRFSGDRSNRLAP
Trigger: TGGCGCCAACCTGTTCGACCTGTCGCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGATGATGGTGCATATAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611102.1
ENST00000615129.4
CDS CAA 72 bp ATAGCCTTTCCACACCTTCTGTATGGTGACAGCTGCTaGGCCCTGACTGAACTTGTGCCATCCATCCTCCCG +
Preference number: 6 (lower is better)
Translates to: IAFPHLLYGDSC*ALTELVPSILP
Trigger: CGGGAGGATGGATGGCACAAGTTCAGTCAGGGCCAAGCAGCTGTCACCATACAGAAGGTGTGGAAAGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp CAGATAGCCTTTCCACACCTTCTGTATGGTGACAGCTaGTTGGCCCTGACTGAACTTGTGCCATCCATCCTC +
Preference number: 6 (lower is better)
Translates to: QIAFPHLLYGDS*LALTELVPSIL
Trigger: GAGGATGGATGGCACAAGTTCAGTCAGGGCCAAGCAGCTGTCACCATACAGAAGGTGTGGAAAGGCTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp TCTCCTCCCGGAGGGTCTCGGAGTCATAATTCTGACTaGGGTGTATGCTCTCACACCGGTTCTTCCATGTAT +
Preference number: 6 (lower is better)
Translates to: SPPGGSRSHNSD*GVCSHTGSSMY
Trigger: ATACATGGAAGAACCGGTGTGAGAGCATACACCCCAGTCAGAATTATGACTCCGAGACCCTCCGGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS GCA 72 bp GCTCCGGACCTTAAAGACTATATGCACCATCATCTGTaGCCCATTCCTGCCAGGATATTTGCCCAGCAGGTT +
Preference number: 6 (lower is better)
Translates to: APDLKDYMHHHL*PIPARIFAQQV
Trigger: AACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGATGATGGTGCATATAGTCTTTAAGGTCCGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611102.1
CDS GCA 72 bp TCTGCCTTTTGCACTAGAATTATGGCCTCAGTCCGGTaGATTCCTGTAAAGCTCTTCTGGGAGGACACTGGC +
Preference number: 6 (lower is better)
Translates to: SAFCTRIMASVR*IPVKLFWEDTG
Trigger: GCCAGTGTCCTCCCAGAAGAGCTTTACAGGAATGCACCGGACTGAGGCCATAATTCTAGTGCAAAAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CCA 72 bp TTCATGCCCGGCACAGATCATAGGGATACATTTGGATaGCAACACTTGCAACACCGCATCCACTTCCCCCTT +
Preference number: 6 (lower is better)
Translates to: FMPGTDHRDTFG*QHLQHRIHFPL
Trigger: AAGGGGGAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAAATGTATCCCTATGATCTGTGCCGGGCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS CAA 72 bp GGCACAGATCATAGGGATACATTTGGATGGCAACACTaGCAACACCGCATCCACTTCCCCCTTCTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: GTDHRDTFGWQH*QHRIHFPLLGL
Trigger: AAGGCCAAGAAGGGGGAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAAATGTATCCCTATGATCTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS GCA 72 bp GCACAGATCATAGGGATACATTTGGATGGCAACACTTaGAACACCGCATCCACTTCCCCCTTCTTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: AQIIGIHLDGNT*NTASTSPFLAF
Trigger: AAAGGCCAAGAAGGGGGAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAAATGTATCCCTATGATCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS GCA 72 bp TCGGGCTACCTTAAAGACTATATGCACCATCATCTGTaGCCCATTCCTGCCAGGATATTTGCCCAGCAGGTT +
Preference number: 6 (lower is better)
Translates to: SGYLKDYMHHHL*PIPARIFAQQV
Trigger: AACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACAGATGATGGTGCATATAGTCTTTAAGGTAGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp GTAAGGTCATGGCACTCGATAAACCACTGTCGGATTTaGTCCTTCATTTTCTCCTTCATGTCAGGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: VRSWHSINHCRI*SFIFSFMSGPS
Trigger: AGAGGGGCCTGACATGAAGGAGAAAATGAAGGAGCAAATCCGACAGTGGTTTATCGAGTGCCATGACCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 90 bp TTTCCAGTTCCATTCTCACCTGTTCTGGCGTTTTGTCTGCAAAGATaGAGTAGGATCCACCTGAAGACGCATCTGGATAATCAGGGAACC +
Preference number: 6 (lower is better)
Translates to: FPVPFSPVLAFCLQR*SRIHLKTHLDNQGT
Trigger: GGTTCCCTGATTATCCAGATGCGTCTTCAGGTGGATCCTACTCAATCTTTGCAGACAAAACGCCAGAACAGGTGAGAATGGAACTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS CAA 90 bp GTATTTAAGTATTCTTCATGCCCGGCACAGATCATAGGGATACATTaGGATGGCAACACTTGCAACACCGCATCCACTTCCCCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: VFKYSSCPAQIIGIH*DGNTCNTASTSPFL
Trigger: CAAGAAGGGGGAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAAATGTATCCCTATGATCTGTGCCGGGCATGAAGAATACTTAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS CAA 72 bp GGCAACACTTGCAACACCGCATCCACTTCCCCCTTCTaGGCCTTTTCTTCCTTTCCTTTCTTCTTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: GNTCNTASTSPF*AFSSFPFFFSF
Trigger: AAAAGAGAAGAAGAAAGGAAAGGAAGAAAAGGCCAAGAAGGGGGAAGTGGATGCGGTGTTGCAAGTGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS GCA 72 bp GGAGGGTCTCGGAGTCATAATTCTGACTGGGGTGTATaGTCTCACACCGGTTCTTCCATGTATTTAAGTATT +
Preference number: 6 (lower is better)
Translates to: GGSRSHNSDWGV*SHTGSSMYLSI
Trigger: AATACTTAAATACATGGAAGAACCGGTGTGAGAGCATACACCCCAGTCAGAATTATGACTCCGAGACCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS CCA 72 bp GCAACACTTGCAACACCGCATCCACTTCCCCCTTCTTaGCCTTTTCTTCCTTTCCTTTCTTCTTCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: ATLATPHPLPPS*PFLPFLSSSLF
Trigger: AAAAAGAGAAGAAGAAAGGAAAGGAAGAAAAGGCCAAGAAGGGGGAAGTGGATGCGGTGTTGCAAGTGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4
CDS CAA 72 bp CCATTCTCACCTGTTCTGGCGTTTTGTCTGCAAAGATaGAGTAGGATCCACCTGAAGACGCATCTGGATAAT +
Preference number: 6 (lower is better)
Translates to: PFSPVLAFCLQR*SRIHLKTHLDN
Trigger: ATTATCCAGATGCGTCTTCAGGTGGATCCTACTCAATCTTTGCAGACAAAACGCCAGAACAGGTGAGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615129.4
CDS GCA 72 bp TCACACCGGTTCTTCCATGTATTTAAGTATTCTTCATaGCCGGCACAGATCATAGGGATACATTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: SHRFFHVFKYSS*PAQIIGIHLDG
Trigger: GCCATCCAAATGTATCCCTATGATCTGTGCCGGGCATGAAGAATACTTAAATACATGGAAGAACCGGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613681.1
ENST00000615129.4