RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQCA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132321

Ensembl transcript IDs: ENST00000254653.9, ENST00000309507.9, ENST00000409100.1, ENST00000409907.8, ENST00000418802.2, ENST00000431676.6, ENST00000465621.1, ENST00000467572.5, ENST00000479471.1, ENST00000479783.1

Found 512 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAACTTTGCAGAAAGATTGGAGTTCAGCATCGAAGGGACGCCGTGTaGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCA +
Preference number: 1 (lower is better)
Translates to: KLCRKIGVQHRRDAV*SPQSESGHLVSGVS
Trigger: TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR GCA 90 bp TTTGTACACTGGATTCATGCTGGTTATCGCCGTAATAAACTCAACTaGAGTGAGAGGTTTATGAATTTGCCGCCGGATTCTCTGATCTGT +
Preference number: 1 (lower is better)
Translates to: FVHWIHAGYRRNKLN*SERFMNLPPDSLIC
Trigger: ACAGATCAGAGAATCCGGCGGCAAATTCATAAACCTCTCACTGCAGTTGAGTTTATTACGGCGATAACCAGCATGAATCCAGTGTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR CCA 90 bp AGAGTGAATTTCAGTTATATACAAACTTGGCGTGGATTAAAGCTGTaGAAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAA +
Preference number: 1 (lower is better)
Translates to: RVNFSYIQTWRGLKL*KVMMNTQLGVQPGK
Trigger: TTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTTCCACAGCTTTAATCCACGCCAAGTTTGTATATAACTGAAATTCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR-3UTR TCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCTAAGTTCCTTCCCCTaGGGGCTTCTTCAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHLSSFP*GLLQAG
Trigger: GCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CAA 90 bp GAGGGCTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTaGGGGTCCTCTCCATCCCAGAGAGACTCAAGCATGGTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: EGFFRRAMVNLFFGE*GSSPSQRDSSMVLQ
Trigger: CTGAAGAACCATGCTTGAGTCTCTCTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CAA 90 bp TCTCTGATCTGTGAGCACGCCTTTAACCACTTCGACTATATGTCCTaGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAA +
Preference number: 2 (lower is better)
Translates to: SLICEHAFNHFDYMS*GEAVSDLRQAADIQ
Trigger: TTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAAGGACATATAGTCGAAGTGGTTAAAGGCGTGCTCACAGATCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCACCTTTGCCTTTTCTGTaGTGCCTCCTGTTATCGCCA +
Preference number: 2 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPPLPFL*CLLLSP
Trigger: TGGCGATAACAGGAGGCAGCACAGAAAAGGCAAAGG...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACACTTTGCAGAAAGATTaGAGTTCAGCATCGAAGGGA +
Preference number: 2 (lower is better)
Translates to: GKGITAHAVVSGFAASAHTLQKD*SSASKG
Trigger: TCCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTCGACTATATGTCCTTaGGTGAAGCCGTCAGTGACC +
Preference number: 2 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHSTICP*VKPSVT
Trigger: GGTCACTGACGGCTTCACCCAAGGACATATAGTCGA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGGTGAATCTTTTCTTTaGCGAGTTGGGGTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHGESFL*RVGVLS
Trigger: GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACC...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR-3UTR TCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATCAGGCGGGCAATGGTaGATCTTTTCTTTGGCGAGT +
Preference number: 2 (lower is better)
Translates to: KVMMNTQLGVQPGKGITASGGQW*IFSLAS
Trigger: ACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATTTTCTTTGGCGAGTTaGGGTCCTCTCCATCCCAGA +
Preference number: 2 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAFSLAS*GPLHPR
Trigger: TCTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATTCCTCTTTGTACACTaGATTCATGCTGGTTATCGC +
Preference number: 2 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPFLFVH*IHAGYR
Trigger: GCGATAACCAGCATGAATCCAGTGTACAAAGAGGAA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGAGAGAGACTCAAGCATaGTTCTTCAGAAAGGCATTA +
Preference number: 2 (lower is better)
Translates to: KGITAHAVVSGFAASAHLRETQA*FFRKAL
Trigger: TAATGCCTTTCTGAAGAACCATGCTTGAGTCTCTCT...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CAA 90 bp GGTTATCGCCGTAATAAACTCAACTGCAGTGAGAGGTTTATGAATTaGCCGCCGGATTCTCTGATCTGTGAGCACGCCTTTAACCACTTC +
Preference number: 2 (lower is better)
Translates to: GYRRNKLNCSERFMN*PPDSLICEHAFNHF
Trigger: GAAGTGGTTAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCAAATTCATAAACCTCTCACTGCAGTTGAGTTTATTACGGCGATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTCTGGAAGCATAGTCTaGTCTGGGCACCAAAATAAT +
Preference number: 2 (lower is better)
Translates to: EESNLERLWRVSRVNFSYSGSIV*SGHQNN
Trigger: ATTATTTTGGTGCCCAGACCAGACTATGCTTCCAGA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR TCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAACTCCATTGCGTTCAATaGTTTGCTTCCACAGAACGT +
Preference number: 2 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQLHCVQ*FASTER
Trigger: ACGTTCTGTGGAAGCAAATCATTGAACGCAATGGAG...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR CCA 72 bp GTGAGCACGCCTTTAACCACTTCGACTATATGTCCTTaGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: VSTPLTTSTICP*VKPSVTFARQL
Trigger: CAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAAGGACATATAGTCGAAGTGGTTAAAGGCGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR CCA 72 bp GGGCTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTaGCGAGTTGGGGTCCTCTCCATCCCAGAGAGACTC +
Preference number: 3 (lower is better)
Translates to: GLLQAGNGESFL*RVGVLSIPERL
Trigger: GAGTCTCTCTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR TCA 72 bp CATCAGCTCACCTGCACACTGCTAAGTTCCTTCCCCTaGGGGCTTCTTCAGGCGGGCAATGGTGAATCTTTT +
Preference number: 3 (lower is better)
Translates to: HQLTCTLLSSFP*GLLQAGNGESF
Trigger: AAAAGATTCACCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTGAGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACTTTTCTTTGGCGAGTaGGGGTCCTCTCCATCCCAG +
Preference number: 3 (lower is better)
Translates to: KVMMNTQLGVQPGKGITALFFGE*GSSPSQ
Trigger: CTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAAG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CCA 72 bp AGAAAGATTGGAGTTCAGCATCGAAGGGACGCCGTGTaGTCCCCACAATCAGAATCCGGTCATCTGGTTTCA +
Preference number: 3 (lower is better)
Translates to: RKIGVQHRRDAV*SPQSESGHLVS
Trigger: TGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGAACTCCAATCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCTCTCTTCTTCCTCTTaGTACACTGGATTCATGCTG +
Preference number: 3 (lower is better)
Translates to: KGITAHAVVSGFAASAHLLSSSS*YTGFML
Trigger: CAGCATGAATCCAGTGTACAAAGAGGAAGAAGAGAG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTTACCCAGAGGAGTTTaGGCATACCAGTTCTTAAAG +
Preference number: 3 (lower is better)
Translates to: KGITAHAVVSGFAASAHLLPRGV*AYQFLK
Trigger: CTTTAAGAACTGGTATGCCAAAACTCCTCTGGGTAA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CAA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCATTGCGTTCAATGATTaGCTTCCACAGAACGTATCT +
Preference number: 3 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIIAFND*LPQNVS
Trigger: AGATACGTTCTGTGGAAGCAAATCATTGAACGCAAT...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATTTTCCCTTTGTCCTTaGCCTTTTCTGTGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAFSLCP*PFLCCL
Trigger: GAGGCAGCACAGAAAAGGCAAAGGACAAAGGGAAAA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR GCA 72 bp TGGATTCATGCTGGTTATCGCCGTAATAAACTCAACTaGAGTGAGAGGTTTATGAATTTGCCGCCGGATTCT +
Preference number: 3 (lower is better)
Translates to: WIHAGYRRNKLN*SERFMNLPPDS
Trigger: AGAATCCGGCGGCAAATTCATAAACCTCTCACTGCAGTTGAGTTTATTACGGCGATAACCAGCATGAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGTGAGGACTCCTCCATaGCGTTCAATGATTTGCTTC +
Preference number: 3 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQVRTPP*RSMICF
Trigger: GAAGCAAATCATTGAACGCAATGGAGGAGTCCTCAC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
3UTR CCA 72 bp TTCAGTTATATACAAACTTGGCGTGGATTAAAGCTGTaGAAAGTTATGATGAACACCCAGCTAGGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: FSYIQTWRGLKL*KVMMNTQLGVQ
Trigger: CTGGACACCTAGCTGGGTGTTCATCATAACTTTCCACAGCTTTAATCCACGCCAAGTTTGTATATAACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CCA 72 bp GATTTGCTTCCACAGAACGTATCTGGAAGCATAGTCTaGTCTGGGCACCAAAATAATTTTCTGGTAAACTTT +
Preference number: 3 (lower is better)
Translates to: DLLPQNVSGSIV*SGHQNNFLVNF
Trigger: AAAGTTTACCAGAAAATTATTTTGGTGCCCAGACCAGACTATGCTTCCAGATACGTTCTGTGGAAGCAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGCACACCACGGAGGGCTaGAGCTGTCGAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWHTTEG*SCRATL
Trigger: CAAGGTGGCTCGACAGCTCCAGCCCTCCGTGGTGTG...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTGGCTCCCGTTTCGGTaGAGATGGCATGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWWLPFR*RWHGPA
Trigger: TGCTGGTCCATGCCATCTGCACCGAAACGGGAGCCA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTAAGTTCCTTCCCCTaGGGGCTTCTTCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHLSSFP*GLLQAG
Trigger: GCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACGCCCTTAGGCGACCTTaGCGTGCCCTCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHALRRP*RALSAI
Trigger: GATTGCTGAGAGGGCACGGCAAGGTCGCCTAAGGGC...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTACAGAGGATTTGGGTaGGGGGTCTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWYRGFG*GVFWRE
Trigger: CTCCCTCCAGAAGACCCCCCACCCAAATCCTCTGTA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGGGTTCTATGGACACCTaGCGAAGAGTAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWGSMDT*RRVVPR
Trigger: CCTGGGGACTACTCTTCGCCAGGTGTCCATAGAACC...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCCAGGAGGGAGGGCATaGGTTCTATGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHPGGRA*VLWTPG
Trigger: GCCAGGTGTCCATAGAACCCATGCCCTCCCTCCTGG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCATCGGGCAGGAAAAGGTaGGGCCGGGTTTGCTTCGCA +
Preference number: 4 (lower is better)
Translates to: DAVWSPQSESGHLVSGVSSGRKR*GRVCFA
Trigger: TGCGAAGCAAACCCGGCCTCACCTTTTCCTGCCCGA...TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTCGGGCAGGAAAAGGTaGGGCCGGGTTTGCTTCGCA +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLSGRKR*GRVCFA
Trigger: TGCGAAGCAAACCCGGCCTCACCTTTTCCTGCCCGA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR TCA 90 bp GACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCACTAAGTTCCTTCCCCTaGGGGCTTCTTCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: DAVWSPQSESGHLVSGVSLSSFP*GLLQAG
Trigger: GCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAG...TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCCTAAGTTCCTTCCCCTaGGGGCTTCTTCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSILSSFP*GLLQAG
Trigger: GCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAG...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCATCTTCAGCTCCAGGATaGGGCCCATCACCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: DAVWSPQSESGHLVSGVSSSAPG*GPSPRP
Trigger: TGGACGGGGTGATGGGCCGCATCCTGGAGCTGAAGA...TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTCTTCAGCTCCAGGATaGGGCCCATCACCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSSSAPG*GPSPRP
Trigger: TGGACGGGGTGATGGGCCGCATCCTGGAGCTGAAGA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTCTTCAGCTCCAGGATaGGGCCCATCACCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSISSAPG*GPSPRP
Trigger: TGGACGGGGTGATGGGCCGCATCCTGGAGCTGAAGA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCGCCCTTAGGCGACCTTaGCGTGCCCTCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSALRRP*RALSAI
Trigger: GATTGCTGAGAGGGCACGGCAAGGTCGCCTAAGGGC...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGCGGCATCAGCTCACCTaGACACTGCTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWRHQLT*TLLSSF
Trigger: GAAGGAACTTAGCAGTGTGCAGGTGAGCTGATGCCG...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TGTCCTTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCATACAGAGGATTTGGGTaGGGGGTCTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CPWVKPSVTFARQLTFKAYRGFG*GVFWRE
Trigger: CTCCCTCCAGAAGACCCCCCACCCAAATCCTCTGTA...TGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCTCTCTGAAGGACGGTaGCAGCAGGGGTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCLSEGR*QQGSGH
Trigger: GTGCCCTGACCCCTGCTGCCACCGTCCTTCAGAGAG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGGCTAGGTGTCCAGCCTaGGAAAGGCATAACAGCACA +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWARCPA*ERHNST
Trigger: TGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGC...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCGGGCAGGAAAAGGTaGGGCCGGGTTTGCTTCGCA +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPSGRKR*GRVCFA
Trigger: TGCGAAGCAAACCCGGCCTCACCTTTTCCTGCCCGA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACGCTGTCGAGCCACCTTaGAGACTGCATGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHAVEPP*RLHAAS
Trigger: TGATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGC...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTGCCGCCGGATTCTCTaGTCTGTGAGCACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHCRRIL*SVSTPL
Trigger: TAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTCAGGCGGGCAATGGTaGATCTTTTCTTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWSGGQW*IFSLAS
Trigger: ACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCTAAGTTCCTTCCCCTaGGGGCTTCTTCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCLSSFP*GLLQAG
Trigger: GCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TGGAGTTCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCAGGGAGAAACCAGGACTaGGAGAATCTTCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: WSSASKGRRVVPTIRIRSGRNQD*ENLLLR
Trigger: CCGAAGCAGAAGATTCTCGCAGTCCTGGTTTCTCCC...TGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGAACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAGCCCTTAGGCGACCTTaGCGTGCCCTCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPALRRP*RALSAI
Trigger: GATTGCTGAGAGGGCACGGCAAGGTCGCCTAAGGGC...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGGCCAAACCTTCTGAATaGGGAGTGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLAKPSE*GVQQPR
Trigger: CCTGGGCTGCTGCACTCCGCATTCAGAAGGTTTGGC...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCGCCAAACCTTCTGAATaGGGAGTGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIAKPSE*GVQQPR
Trigger: CCTGGGCTGCTGCACTCCGCATTCAGAAGGTTTGGC...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTTGCCTTTTCTGTGCTaGCTCCTGTTATCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWLPFLC*LLLSPR
Trigger: CCTTGGCGATAACAGGAGGCAGCACAGAAAAGGCAA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTCGGCATCAGCTCACCTaGACACTGCTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGRHQLT*TLLSSF
Trigger: GAAGGAACTTAGCAGTGTGCAGGTGAGCTGATGCCG...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGATCAGTATTCGTTTCTaGGGGTGGACGAACTGGTCG +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWISIRF*GWTNWS
Trigger: CGACCAGTTCGTCCACCCCCAGAAACGAATACTGAT...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTCGGTGCAGATGGCATaGACCAGCATTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWSVQMA*TSIFFP
Trigger: AGGGAAGAAAATGCTGGTCCATGCCATCTGCACCGA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGGCACACCACGGAGGGCTaGAGCTGTCGAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: VVPTIRIRSSGFRSFRIWHTTEG*SCRATL
Trigger: CAAGGTGGCTCGACAGCTCCAGCCCTCCGTGGTGTG...CCAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCGAAGGGACGCCGTGTaGTCCCCACAATCAGAATCC +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLRRDAV*SPQSES
Trigger: GGATTCTGATTGTGGGGACCACACGGCGTCCCTTCG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCCGAAGGGACGCCGTGTaGTCCCCACAATCAGAATCC +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSRRDAV*SPQSES
Trigger: GGATTCTGATTGTGGGGACCACACGGCGTCCCTTCG...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCATTCAAGGCACTGGTaGGGACTCCTCCATTGCGTT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHHSRHW*GLLHCV
Trigger: AACGCAATGGAGGAGTCCTCACCAGTGCCTTGAATG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTGCCGCCGGATTCTCTaGTCTGTGAGCACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLCRRIL*SVSTPL
Trigger: TAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACGGGAGAAACCAGGACTaGGAGAATCTTCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHGRNQD*ENLLLR
Trigger: CCGAAGCAGAAGATTCTCGCAGTCCTGGTTTCTCCC...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAGGGAAGCTCTTCCGTTaGTCTCTGAAGGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPGKLFR*SLKDGG
Trigger: GCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCC...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCCTTAGGCGACCTTaGCGTGCCCTCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHALRRP*RALSAI
Trigger: GATTGCTGAGAGGGCACGGCAAGGTCGCCTAAGGGC...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTTCTGAATGCGGAGTaGAGCAGCCCAGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHLLNAE*SSPGIC
Trigger: ACAGATACCTGGGCTGCTGCACTCCGCATTCAGAAG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAGCCAAACCTTCTGAATaGGGAGTGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPAKPSE*GVQQPR
Trigger: CCTGGGCTGCTGCACTCCGCATTCAGAAGGTTTGGC...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATGGCTCCCGTTTCGGTaGAGATGGCATGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPWLPFR*RWHGPA
Trigger: TGCTGGTCCATGCCATCTGCACCGAAACGGGAGCCA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGAGCCACCTTGAAGACTaGATGCAGCATCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWSHLED*MQHHLE
Trigger: CTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCT...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGCTCTCTGAAGGACGGTaGCAGCAGGGGTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLLSEGR*QQGSGH
Trigger: GTGCCCTGACCCCTGCTGCCACCGTCCTTCAGAGAG...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTATCAGTATTCGTTTCTaGGGGTGGACGAACTGGTCG +
Preference number: 4 (lower is better)
Translates to: SASKGRRVVPTIRIRSSGISIRF*GWTNWS
Trigger: CGACCAGTTCGTCCACCCCCAGAAACGAATACTGAT...ACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TGGAGTTCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCAGCATGCAGCATCATTTaGAGGCCATTTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WSSASKGRRVVPTIRIRSACSII*RPFLPG
Trigger: CCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGC...TGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGAACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTTCGACTATATGTCCTTaGGTGAAGCCGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGSTICP*VKPSVT
Trigger: GGTCACTGACGGCTTCACCCAAGGACATATAGTCGA...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACGCTAGGTGTCCAGCCTaGGAAAGGCATAACAGCACA +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHARCPA*ERHNST
Trigger: TGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGC...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CAA 72 bp TGTGAGCACGCCTTTAACCACTTCGACTATATGTCCTaGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CEHAFNHFDYMS*GEAVSDLRQAA
Trigger: AGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAAGGACATATAGTCGAAGTGGTTAAAGGCGTGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCGTCCAGGACTTTCCTaGTCAGTATTCGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHRPGLS*SVFVSG
Trigger: CCCAGAAACGAATACTGATCAGGAAAGTCCTGGACG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTGCCGGATCTGGTCTTaGAGGTTCTCCTTGATATCC +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHCRIWS*RFSLIS
Trigger: GGATATCAAGGAGAACCTTCAAGACCAGATCCGGCA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCGCTGTCGAGCCACCTTaGAGACTGCATGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCAVEPP*RLHAAS
Trigger: TGATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGC...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACGCAGTGAGAGGTTTATaGATTTGCCGCCGGATTCTC +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHAVRGL*ICRRIL
Trigger: GAGAATCCGGCGGCAAATTCATAAACCTCTCACTGC...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTCAGGCGGGCAATGGTaGATCTTTTCTTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHSGGQW*IFSLAS
Trigger: ACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCAAACCTTCTGAATaGGGAGTGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHAKPSE*GVQQPR
Trigger: CCTGGGCTGCTGCACTCCGCATTCAGAAGGTTTGGC...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTCTTCATGCTTTATCTaGACCTCATTCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHSSCFI*TSFRRR
Trigger: CCGCCTGCGGAATGAGGTGCAGATAAAGCATGAAGA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTAGCCACCTTGAAGACTaGATGCAGCATCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGSHLED*MQHHLE
Trigger: CTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCT...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCCTTTGCCTTTTCTGTaGTGCCTCCTGTTATCGCCA +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHPLPFL*CLLLSP
Trigger: TGGCGATAACAGGAGGCAGCACAGAAAAGGCAAAGG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTACAGAGGATTTGGGTaGGGGGTCTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCYRGFG*GVFWRE
Trigger: CTCCCTCCAGAAGACCCCCCACCCAAATCCTCTGTA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CCA 90 bp TGGAGTTCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCAGGAATATCTAATTGTTaGGGGGCCAGCTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: WSSASKGRRVVPTIRIRSGISNC*GASLRS
Trigger: GGATCTCAAGCTGGCCCCCCAACAATTAGATATTCC...TGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGAACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCGGTTCTATGGACACCTaGCGAAGAGTAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCGSMDT*RRVVPR
Trigger: CCTGGGGACTACTCTTCGCCAGGTGTCCATAGAACC...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp ATTCAAGGCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTTGCTTCCACAGCCAGGAGGGAGGGCATaGGTTCTATGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: IQGTGEDSSIAFNDLLPQPGGRA*VLWTPG
Trigger: GCCAGGTGTCCATAGAACCCATGCCCTCCCTCCTGG...CTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCCTTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACCAGGAGGGAGGGCATaGGTTCTATGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAPGGRA*VLWTPG
Trigger: GCCAGGTGTCCATAGAACCCATGCCCTCCCTCCTGG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCCGTTTCGGTGCAGATaGCATGGACCAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHPFRCR*HGPAFS
Trigger: AGAAAATGCTGGTCCATGCCATCTGCACCGAAACGG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGCAGAATCCGGTCATCTaGTTTCAGGAGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWQNPVI*FQEFQD
Trigger: ATCCTGAAACTCCTGAAACCAGATGACCGGATTCTG...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCGAAGGGACGCCGTGTaGTCCCCACAATCAGAATCC +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHRRDAV*SPQSES
Trigger: GGATTCTGATTGTGGGGACCACACGGCGTCCCTTCG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACGGTGAATCTTTTCTTTaGCGAGTTGGGGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHGESFL*RVGVLS
Trigger: GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACC...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CAA 72 bp TTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTaGGGGTCCTCTCCATCCCAGAGAGACTCAAGCATG +
Preference number: 4 (lower is better)
Translates to: FRRAMVNLFFGE*GSSPSQRDSSM
Trigger: CATGCTTGAGTCTCTCTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACAATAATGGAACTCCGTaGGTTCCAGCTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHNNGTP*VPAPPS
Trigger: AGATGGTGGAGCTGGAACTCACGGAGTTCCATTATT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TGTCCTTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCATGTAATCAGAGAGGTTaGCTTTCAGAGCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: CPWVKPSVTFARQLTFKACNQRG*LSEPGS
Trigger: TGATCCAGGCTCTGAAAGTCAACCTCTCTGATTACA...TGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp CACGCCTTTAACCACTTCGACTATATGTCCTTGGGTGAAGCCGTCAGTGACCTTGCTGTCGAGCCACCTTaGAGACTGCATGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: HAFNHFDYMSLGEAVSDLAVEPP*RLHAAS
Trigger: TGATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGC...AAGGTCACTGACGGCTTCACCCAAGGACATATAGTCGAAGTGGTTAAAGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp CACGCCTTTAACCACTTCGACTATATGTCCTTGGGTGAAGCCGTCAGTGACCTTTGCCGCCGGATTCTCTaGTCTGTGAGCACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HAFNHFDYMSLGEAVSDLCRRIL*SVSTPL
Trigger: TAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCA...AAGGTCACTGACGGCTTCACCCAAGGACATATAGTCGAAGTGGTTAAAGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGGCAGTGAGAGGTTTATaGATTTGCCGCCGGATTCTC +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLAVRGL*ICRRIL
Trigger: GAGAATCCGGCGGCAAATTCATAAACCTCTCACTGC...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTGTTTTCCTCAGCGCTaGGAGACGGCGTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHCFPQR*ETASSP
Trigger: AGGAGATGACGCCGTCTCTCAGCGCTGAGGAAAACA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431676.6
CDS-3UTR GCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGGGGAAGCTCTTCCGTTaGTCTCTGAAGGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLGKLFR*SLKDGG
Trigger: GCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCC...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTCTTCATGCTTTATCTaGACCTCATTCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSISSCFI*TSFRRR
Trigger: CCGCCTGCGGAATGAGGTGCAGATAAAGCATGAAGA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGGTCCTTTTTCTTTCCTaGTTTCACTGGGCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLVLFLS*FHWALP
Trigger: AGGGAGCGCCCAGTGAAAGCAGGAAAGAAAAAGGAC...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGTGGCTCCCGTTTCGGTaGAGATGGCATGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLWLPFR*RWHGPA
Trigger: TGCTGGTCCATGCCATCTGCACCGAAACGGGAGCCA...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTTGCCTTTTCTGTGCTaGCTCCTGTTATCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSLPFLC*LLLSPR
Trigger: CCTTGGCGATAACAGGAGGCAGCACAGAAAAGGCAA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCCCTTTGCCTTTTCTGTaGTGCCTCCTGTTATCGCCA +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSPLPFL*CLLLSP
Trigger: TGGCGATAACAGGAGGCAGCACAGAAAAGGCAAAGG...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCCTTTGCCTTTTCTGTaGTGCCTCCTGTTATCGCCA +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLPLPFL*CLLLSP
Trigger: TGGCGATAACAGGAGGCAGCACAGAAAAGGCAAAGG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCGGCATCAGCTCACCTaGACACTGCTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCRHQLT*TLLSSF
Trigger: GAAGGAACTTAGCAGTGTGCAGGTGAGCTGATGCCG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCAGTATTCGTTTCTaGGGGTGGACGAACTGGTCG +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSISIRF*GWTNWS
Trigger: CGACCAGTTCGTCCACCCCCAGAAACGAATACTGAT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTTGACTTTCAGAGCCTaGATCAGTAATCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWLTFRA*ISNPSS
Trigger: GGAAGAAGGATTACTGATCCAGGCTCTGAAAGTCAA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp ACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGTCGGTGCAGATGGCATaGACCAGCATTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TPCGPHNQNPVIWFQEFQSVQMA*TSIFFP
Trigger: AGGGAAGAAAATGCTGGTCCATGCCATCTGCACCGA...CTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCCGTTTCGGTGCAGATaGCATGGACCAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLPFRCR*HGPAFS
Trigger: AGAAAATGCTGGTCCATGCCATCTGCACCGAAACGG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCGCATGCAGCATCATTTaGAGGCCATTTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSACSII*RPFLPG
Trigger: CCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGC...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACGAAGGGACGCCGTGTaGTCCCCACAATCAGAATCC +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITARRDAV*SPQSES
Trigger: GGATTCTGATTGTGGGGACCACACGGCGTCCCTTCG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTCGACTATATGTCCTTaGGTGAAGCCGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSSTICP*VKPSVT
Trigger: GGTCACTGACGGCTTCACCCAAGGACATATAGTCGA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCGGTGAATCTTTTCTTTaGCGAGTTGGGGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSGESFL*RVGVLS
Trigger: GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACC...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAGCTAGGTGTCCAGCCTaGGAAAGGCATAACAGCACA +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPARCPA*ERHNST
Trigger: TGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGC...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCAATAATGGAACTCCGTaGGTTCCAGCTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSINNGTP*VPAPPS
Trigger: AGATGGTGGAGCTGGAACTCACGGAGTTCCATTATT...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGAATAATGGAACTCCGTaGGTTCCAGCTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLNNGTP*VPAPPS
Trigger: AGATGGTGGAGCTGGAACTCACGGAGTTCCATTATT...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTCAGTTTCCTTACGTTaGTGGAAACGTCGCCAAACC +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSISVSLR*WKRRQT
Trigger: GGTTTGGCGACGTTTCCATCAACGTAAGGAAACTGA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTTGAAGGTTCTCCTTaGTATCCACGCCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHLEGSP*YPRLLS
Trigger: TGATAGAAGGCGTGGATATCAAGGAGAACCTTCAAG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACAATTTCTGCATTCGATaGACCAATGCCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHNFCIR*TNAGSG
Trigger: ACCAGATCCGGCATTGGTTCATCGAATGCAGAAATT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGCATCAACCTGTATCCTaGTCTCTGACTGTAATTCTT +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWHQPVS*SLTVIL
Trigger: AAGAATTACAGTCAGAGATCAGGATACAGGTTGATG...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CACGCCTTTAACCACTTCGACTATATGTCCTTGGGTGAAGCCGTCAGTGACCTTCATTCAAGGCACTGGTaGGGACTCCTCCATTGCGTT +
Preference number: 4 (lower is better)
Translates to: HAFNHFDYMSLGEAVSDLHSRHW*GLLHCV
Trigger: AACGCAATGGAGGAGTCCTCACCAGTGCCTTGAATG...AAGGTCACTGACGGCTTCACCCAAGGACATATAGTCGAAGTGGTTAAAGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCATTCAAGGCACTGGTaGGGACTCCTCCATTGCGTT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHHSRHW*GLLHCV
Trigger: AACGCAATGGAGGAGTCCTCACCAGTGCCTTGAATG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATGCCGCCGGATTCTCTaGTCTGTGAGCACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITACRRIL*SVSTPL
Trigger: TAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCAGGCGGGCAATGGTaGATCTTTTCTTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPSGGQW*IFSLAS
Trigger: ACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAACTGCGAGAATCTTCTaGTTCGGGCAGGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPTARIF*FGQEKV
Trigger: CACCTTTTCCTGCCCGAAGCAGAAGATTCTCGCAGT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTTCATGCTTTATCTaGACCTCATTCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPSSCFI*TSFRRR
Trigger: CCGCCTGCGGAATGAGGTGCAGATAAAGCATGAAGA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCGTCCTTTTTCTTTCCTaGTTTCACTGGGCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCVLFLS*FHWALP
Trigger: AGGGAGCGCCCAGTGAAAGCAGGAAAGAAAAAGGAC...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGAGCCACCTTGAAGACTaGATGCAGCATCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLSHLED*MQHHLE
Trigger: CTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCT...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTTGCGTTCAATGATTTaGTTCCACAGAACGTATCTG +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWLRSMI*FHRTYL
Trigger: CAGATACGTTCTGTGGAAGCAAATCATTGAACGCAA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATTGCCTTTTCTGTGCTaGCTCCTGTTATCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPLPFLC*LLLSPR
Trigger: CCTTGGCGATAACAGGAGGCAGCACAGAAAAGGCAA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTGCGTTCGACATTGCTaGCTACTTTCCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSCVRHC*LLSLFS
Trigger: GGAAAAGAGGGAAAGTAGCCAGCAATGTCGAACGCA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCGGAATATCTAATTGTTaGGGGGCCAGCTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIGISNC*GASLRS
Trigger: GGATCTCAAGCTGGCCCCCCAACAATTAGATATTCC...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTCGGTGCAGATGGCATaGACCAGCATTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCSVQMA*TSIFFP
Trigger: AGGGAAGAAAATGCTGGTCCATGCCATCTGCACCGA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTCCACAGAACGTATCTaGAAGCATAGTCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLSTERI*KHSLVW
Trigger: CCAGACCAGACTATGCTTCCAGATACGTTCTGTGGA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTCCACAGAACGTATCTaGAAGCATAGTCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSISTERI*KHSLVW
Trigger: CCAGACCAGACTATGCTTCCAGATACGTTCTGTGGA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCGACTATATGTCCTTaGGTGAAGCCGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPSTICP*VKPSVT
Trigger: GGTCACTGACGGCTTCACCCAAGGACATATAGTCGA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTGTAATCAGAGAGGTTaGCTTTCAGAGCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSICNQRG*LSEPGS
Trigger: TGATCCAGGCTCTGAAAGTCAACCTCTCTGATTACA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTGTAATCAGAGAGGTTaGCTTTCAGAGCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLCNQRG*LSEPGS
Trigger: TGATCCAGGCTCTGAAAGTCAACCTCTCTGATTACA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCTCCATTGCGTTCAATaGTTTGCTTCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLLHCVQ*FASTER
Trigger: ACGTTCTGTGGAAGCAAATCATTGAACGCAATGGAG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGGGAGGGTGTCAAGAGTaGATTTCAGTTATATACAAA +
Preference number: 4 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWGGCQE*ISVIYK
Trigger: TTTGTATATAACTGAAATTCACTCTTGACACCCTCC...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCCATTGCGTTCGACATTaGTGGCTACTTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIHCVRH*WLLSLF
Trigger: AAAGAGGGAAAGTAGCCAGCAATGTCGAACGCAATG...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCATTGCGTTCGACATTaGTGGCTACTTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLHCVRH*WLLSLF
Trigger: AAAGAGGGAAAGTAGCCAGCAATGTCGAACGCAATG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACTTCTGAATGCGGAGTaGAGCAGCCCAGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITALLNAE*SSPGIC
Trigger: ACAGATACCTGGGCTGCTGCACTCCGCATTCAGAAG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTTTGGAGGCCATTTTTaGCAGGGTATTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLFGGHF*QGISQQ
Trigger: TTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAACCTTGAAGACTGCATaGAGCATCATTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPTLKTA*SIIWRP
Trigger: TGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCCAAGTTTTTCTGCAATaGAGCAACTTCGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSQVFLQ*SNFASR
Trigger: TCTGCTGGCGAAGTTGCTGCATTGCAGAAAAACTTG...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATGCGTTCGACATTGCTaGCTACTTTCCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPCVRHC*LLSLFS
Trigger: GGAAAAGAGGGAAAGTAGCCAGCAATGTCGAACGCA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCGGAATATCTAATTGTTaGGGGGCCAGCTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCGISNC*GASLRS
Trigger: GGATCTCAAGCTGGCCCCCCAACAATTAGATATTCC...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTCCACCTTTTCAGCCTaGATTACTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSSTFSA*ITVALT
Trigger: AGTCAGTGCTACAGTAATCCAGGCTGAAAAGGTGGA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTATACAGAGACTCGATaGTCCTGTCAGCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIYTETR*SCQLSD
Trigger: ATCTGACAGCTGACAGGACCATCGAGTCTCTGTATA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCCGTTTCGGTGCAGATaGCATGGACCAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHPFRCR*HGPAFS
Trigger: AGAAAATGCTGGTCCATGCCATCTGCACCGAAACGG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACACACCACGGAGGGCTaGAGCTGTCGAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIHTTEG*SCRATL
Trigger: CAAGGTGGCTCGACAGCTCCAGCCCTCCGTGGTGTG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCAGAATCCGGTCATCTaGTTTCAGGAGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLQNPVI*FQEFQD
Trigger: ATCCTGAAACTCCTGAAACCAGATGACCGGATTCTG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTCCACAGAACGTATCTaGAAGCATAGTCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCSTERI*KHSLVW
Trigger: CCAGACCAGACTATGCTTCCAGATACGTTCTGTGGA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCCACAGAACGTATCTaGAAGCATAGTCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPSTERI*KHSLVW
Trigger: CCAGACCAGACTATGCTTCCAGATACGTTCTGTGGA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTAGAGAGACTCAAGCATaGTTCTTCAGAAAGGCATTA +
Preference number: 4 (lower is better)
Translates to: SASKGRRVVPTIRIRSSGRETQA*FFRKAL
Trigger: TAATGCCTTTCTGAAGAACCATGCTTGAGTCTCTCT...ACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTTTTCTTTGGCGAGTTaGGGTCCTCTCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHFSLAS*GPLHPR
Trigger: TCTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAAGGAAGAGTCCAACTTaGAAAGACTGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPRKSPT*KDCGGC
Trigger: ACACCCTCCACAGTCTTTCCAAGTTGGACTCTTCCT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CAA 72 bp GGCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTaGCTTCCACAGAACGTATCTGGAAGCATAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GTGEDSSIAFND*LPQNVSGSIVW
Trigger: CCAGACTATGCTTCCAGATACGTTCTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGGATAGATTTGCTTCATaGATAAAGCCCTTAGGCGAC +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLDRFAS*IKPLGD
Trigger: GTCGCCTAAGGGCTTTATTCATGAAGCAAATCTATC...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp CACGCCTTTAACCACTTCGACTATATGTCCTTGGGTGAAGCCGTCAGTGACCTTTCAGTTTCCTTACGTTaGTGGAAACGTCGCCAAACC +
Preference number: 4 (lower is better)
Translates to: HAFNHFDYMSLGEAVSDLSVSLR*WKRRQT
Trigger: GGTTTGGCGACGTTTCCATCAACGTAAGGAAACTGA...AAGGTCACTGACGGCTTCACCCAAGGACATATAGTCGAAGTGGTTAAAGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTCAGTTTCCTTACGTTaGTGGAAACGTCGCCAAACC +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHSVSLR*WKRRQT
Trigger: GGTTTGGCGACGTTTCCATCAACGTAAGGAAACTGA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAAATTTCTGCATTCGATaGACCAATGCCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPNFCIR*TNAGSG
Trigger: ACCAGATCCGGCATTGGTTCATCGAATGCAGAAATT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATGTAATCAGAGAGGTTaGCTTTCAGAGCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPCNQRG*LSEPGS
Trigger: TGATCCAGGCTCTGAAAGTCAACCTCTCTGATTACA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCTCCATTGCGTTCAATaGTTTGCTTCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCLHCVQ*FASTER
Trigger: ACGTTCTGTGGAAGCAAATCATTGAACGCAATGGAG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAGCAGTGAGAGGTTTATaGATTTGCCGCCGGATTCTC +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAAVRGL*ICRRIL
Trigger: GAGAATCCGGCGGCAAATTCATAAACCTCTCACTGC...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTGGAGGGTGTCAAGAGTaGATTTCAGTTATATACAAA +
Preference number: 4 (lower is better)
Translates to: SASKGRRVVPTIRIRSSGGGCQE*ISVIYK
Trigger: TTTGTATATAACTGAAATTCACTCTTGACACCCTCC...ACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp ATTCAAGGCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTTGCTTCCACAGGTCCTTTTTCTTTCCTaGTTTCACTGGGCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: IQGTGEDSSIAFNDLLPQVLFLS*FHWALP
Trigger: AGGGAGCGCCCAGTGAAAGCAGGAAAGAAAAAGGAC...CTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCCTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAAAGGAGCTTTCTCATaGACTGCTGCAGAACCTAAT +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSKGAFS*TAAEPN
Trigger: ATTAGGTTCTGCAGCAGTGCATGAGAAAGCTCCTTT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTGGCTCCCGTTTCGGTaGAGATGGCATGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYWLPFR*RWHGPA
Trigger: TGCTGGTCCATGCCATCTGCACCGAAACGGGAGCCA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTTGCGTTCAATGATTTaGTTCCACAGAACGTATCTG +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHLRSMI*FHRTYL
Trigger: CAGATACGTTCTGTGGAAGCAAATCATTGAACGCAA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp ATTCAAGGCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTTGCTTCCACAGTTGCCTTTTCTGTGCTaGCTCCTGTTATCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: IQGTGEDSSIAFNDLLPQLPFLC*LLLSPR
Trigger: CCTTGGCGATAACAGGAGGCAGCACAGAAAAGGCAA...CTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCCTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTATACAGAGACTCGATaGTCCTGTCAGCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCYTETR*SCQLSD
Trigger: ATCTGACAGCTGACAGGACCATCGAGTCTCTGTATA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTTGACTTTCAGAGCCTaGATCAGTAATCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSILTFRA*ISNPSS
Trigger: GGAAGAAGGATTACTGATCCAGGCTCTGAAAGTCAA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAGCATGCAGCATCATTTaGAGGCCATTTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAACSII*RPFLPG
Trigger: CCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGC...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCACTTTGCAGAAAGATTaGAGTTCAGCATCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSTLQKD*SSASKG
Trigger: TCCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCATTCCTCTTTGTACACTaGATTCATGCTGGTTATCGC +
Preference number: 4 (lower is better)
Translates to: DAVWSPQSESGHLVSGVSFLFVH*IHAGYR
Trigger: GCGATAACCAGCATGAATCCAGTGTACAAAGAGGAA...TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp ATTCAAGGCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTTGCTTCCACAGTTTTCTTTGGCGAGTTaGGGTCCTCTCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: IQGTGEDSSIAFNDLLPQFSLAS*GPLHPR
Trigger: TCTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAA...CTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCCTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTTATACAAACTTGGCGTaGATTAAAGCTGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGYTNLA*IKAVES
Trigger: ACTTTCCACAGCTTTAATCCACGCCAAGTTTGTATA...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCGATAGATTTGCTTCATaGATAAAGCCCTTAGGCGAC +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCDRFAS*IKPLGD
Trigger: GTCGCCTAAGGGCTTTATTCATGAAGCAAATCTATC...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAGATAGATTTGCTTCATaGATAAAGCCCTTAGGCGAC +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPDRFAS*IKPLGD
Trigger: GTCGCCTAAGGGCTTTATTCATGAAGCAAATCTATC...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATGCTGTCGAGCCACCTTaGAGACTGCATGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYAVEPP*RLHAAS
Trigger: TGATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGC...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCCCAAGCATCTTGGATTaGTTTGCTCTATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIPSILD*FALYSC
Trigger: GCAAGAATATAGAGCAAAGCAATCCAAGATGCTTGG...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCCAGATTTCTTTGTATaGGTTACATCCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHPDFFV*VTSFLH
Trigger: ATGAAGGAAGGATGTAACGCATACAAAGAAATCTGG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCAAAGGAGCTTTCTCATaGACTGCTGCAGAACCTAAT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCKGAFS*TAAEPN
Trigger: ATTAGGTTCTGCAGCAGTGCATGAGAAAGCTCCTTT...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGACCTTGAAGACTGCATaGAGCATCATTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLTLKTA*SIIWRP
Trigger: TGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGT...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp ACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGCTTTTCAAGTTTTTCTaGAATGCAGCAACTTCGCCA +
Preference number: 4 (lower is better)
Translates to: TPCGPHNQNPVIWFQEFQLFKFF*NAATSP
Trigger: TGGCGAAGTTGCTGCATTGCAGAAAAACTTGAAAAG...CTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp ACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGTTGCGTTCAATGATTTaGTTCCACAGAACGTATCTG +
Preference number: 4 (lower is better)
Translates to: TPCGPHNQNPVIWFQEFQLRSMI*FHRTYL
Trigger: CAGATACGTTCTGTGGAAGCAAATCATTGAACGCAA...CTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTCGTAATAAACTCAACTaGAGTGAGAGGTTTATGAAT +
Preference number: 4 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGRNKLN*SERFMN
Trigger: ATTCATAAACCTCTCACTGCAGTTGAGTTTATTACG...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATTAAAGAGAGGAGGTaGATTCATACCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSIKERR*IHTQED
Trigger: ATCTTCCTGGGTATGAATCCACCTCCTCTCTTTAAT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGATTAAAGAGAGGAGGTaGATTCATACCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLIKERR*IHTQED
Trigger: ATCTTCCTGGGTATGAATCCACCTCCTCTCTTTAAT...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTTGACTTTCAGAGCCTaGATCAGTAATCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCLTFRA*ISNPSS
Trigger: GGAAGAAGGATTACTGATCCAGGCTCTGAAAGTCAA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATGGTTCTATGGACACCTaGCGAAGAGTAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYGSMDT*RRVVPR
Trigger: CCTGGGGACTACTCTTCGCCAGGTGTCCATAGAACC...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAACCAGGAGGGAGGGCATaGGTTCTATGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQPGGRA*VLWTPG
Trigger: GCCAGGTGTCCATAGAACCCATGCCCTCCCTCCTGG...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTCTGGAAGCATAGTCTaGTCTGGGCACCAAAATAAT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCSGSIV*SGHQNN
Trigger: ATTATTTTGGTGCCCAGACCAGACTATGCTTCCAGA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTGGAAGCATAGTCTaGTCTGGGCACCAAAATAAT +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPSGSIV*SGHQNN
Trigger: ATTATTTTGGTGCCCAGACCAGACTATGCTTCCAGA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTATACAAACTTGGCGTaGATTAAAGCTGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHYTNLA*IKAVES
Trigger: ACTTTCCACAGCTTTAATCCACGCCAAGTTTGTATA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACAGTTATATACAAACTTaGCGTGGATTAAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHSYIQT*RGLKLW
Trigger: CCACAGCTTTAATCCACGCCAAGTTTGTATATAACT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGAGGAAGAGTCCAACTTaGAAAGACTGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLRKSPT*KDCGGC
Trigger: ACACCCTCCACAGTCTTTCCAAGTTGGACTCTTCCT...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAAGGAAGAGTCCAACTTaGAAAGACTGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITARKSPT*KDCGGC
Trigger: ACACCCTCCACAGTCTTTCCAAGTTGGACTCTTCCT...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAGGTTCAATCATCTTCTaGGGCTCTTTATCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPGSIIF*GSLSSK
Trigger: TTTACTCGATAAAGAGCCTCAGAAGATGATTGAACC...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCTGTCCGCTAATATTTaGGCAAGAATTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLLSANI*ARIFSL
Trigger: AAGAGAGAAAATTCTTGCTCAAATATTAGCGGACAG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGCTTGAAGGTTCTCCTTaGTATCCACGCCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLLEGSP*YPRLLS
Trigger: TGATAGAAGGCGTGGATATCAAGGAGAACCTTCAAG...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAAATTTCTGCATTCGATaGACCAATGCCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITANFCIR*TNAGSG
Trigger: ACCAGATCCGGCATTGGTTCATCGAATGCAGAAATT...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCATCAACCTGTATCCTaGTCTCTGACTGTAATTCTT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCHQPVS*SLTVIL
Trigger: AAGAATTACAGTCAGAGATCAGGATACAGGTTGATG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACGCCAGCAGAGGGAGTaGACATCTTTTCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIRQQRE*TSFLRW
Trigger: CCAACGCAGAAAAGATGTTCACTCCCTCTGCTGGCG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACTCCATTGCGTTCAATaGTTTGCTTCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITALHCVQ*FASTER
Trigger: ACGTTCTGTGGAAGCAAATCATTGAACGCAATGGAG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATCATTCAAGGCACTGGTaGGGACTCCTCCATTGCGTT +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYHSRHW*GLLHCV
Trigger: AACGCAATGGAGGAGTCCTCACCAGTGCCTTGAATG...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTGCGTTCGACATTaGTGGCTACTTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAHCVRH*WLLSLF
Trigger: AAAGAGGGAAAGTAGCCAGCAATGTCGAACGCAATG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCATCTTGGATTGCTTTaGTCTATATTCTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHHLGLL*SIFLQI
Trigger: TATCTGCAAGAATATAGAGCAAAGCAATCCAAGATG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCCCAGATTTCTTTGTATaGGTTACATCCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSPDFFV*VTSFLH
Trigger: ATGAAGGAAGGATGTAACGCATACAAAGAAATCTGG...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCGTAATAAACTCAACTaGAGTGAGAGGTTTATGAAT +
Preference number: 4 (lower is better)
Translates to: GKGITAHAVVSGFAASAHRNKLN*SERFMN
Trigger: ATTCATAAACCTCTCACTGCAGTTGAGTTTATTACG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATCGGCATCAGCTCACCTaGACACTGCTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYRHQLT*TLLSSF
Trigger: GAAGGAACTTAGCAGTGTGCAGGTGAGCTGATGCCG...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGAACCTGATTTCTTTGTaGTTCAATCATCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLNLISL*FNHLLR
Trigger: CCTCAGAAGATGATTGAACCACAAAGAAATCAGGTT...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCAACCTGATTTCTTTGTaGTTCAATCATCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQAGNGESFLWRVGVLSINLISL*FNHLLR
Trigger: CCTCAGAAGATGATTGAACCACAAAGAAATCAGGTT...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCATCTTGCCAAGCATCTTaGATTGCTTTGCTCTATATT +
Preference number: 4 (lower is better)
Translates to: DAVWSPQSESGHLVSGVSSCQAS*IALLYI
Trigger: AATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGA...TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTCTTGCCAAGCATCTTaGATTGCTTTGCTCTATATT +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSSCQAS*IALLYI
Trigger: AATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAATTAAAGAGAGGAGGTaGATTCATACCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPIKERR*IHTQED
Trigger: ATCTTCCTGGGTATGAATCCACCTCCTCTCTTTAAT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCACTCTTTGATCAGTTCTaGATCATAGTCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPLFDQF*IIVLRE
Trigger: TTCTCTCAGGACTATGATCCAGAACTGATCAAAGAG...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATATACAGAGACTCGATaGTCCTGTCAGCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAYTETR*SCQLSD
Trigger: ATCTGACAGCTGACAGGACCATCGAGTCTCTGTATA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGCAGAATCCGGTCATCTaGTTTCAGGAGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLQNPVI*FQEFQD
Trigger: ATCCTGAAACTCCTGAAACCAGATGACCGGATTCTG...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTCTGGAAGCATAGTCTaGTCTGGGCACCAAAATAAT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHSGSIV*SGHQNN
Trigger: ATTATTTTGGTGCCCAGACCAGACTATGCTTCCAGA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTATACAAACTTGGCGTaGATTAAAGCTGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLYTNLA*IKAVES
Trigger: ACTTTCCACAGCTTTAATCCACGCCAAGTTTGTATA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGGTTCAATCATCTTCTaGGGCTCTTTATCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHGSIIF*GSLSSK
Trigger: TTTACTCGATAAAGAGCCTCAGAAGATGATTGAACC...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCTGTCCGCTAATATTTaGGCAAGAATTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCLSANI*ARIFSL
Trigger: AAGAGAGAAAATTCTTGCTCAAATATTAGCGGACAG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTTCGTTTCTCCTCTTTaGTCAGTTCTGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHFVSPL*SVLDHS
Trigger: ACTATGATCCAGAACTGATCAAAGAGGAGAAACGAA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATACTGCGAGAATCTTCTaGTTCGGGCAGGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYTARIF*FGQEKV
Trigger: CACCTTTTCCTGCCCGAAGCAGAAGATTCTCGCAGT...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCCATCTTGGATTGCTTTaGTCTATATTCTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSHLGLL*SIFLQI
Trigger: TATCTGCAAGAATATAGAGCAAAGCAATCCAAGATG...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCCAAGCATCTTGGATTaGTTTGCTCTATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHPSILD*FALYSC
Trigger: GCAAGAATATAGAGCAAAGCAATCCAAGATGCTTGG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACTTCTGAATGCGGAGTaGAGCAGCCCAGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYILLNAE*SSPGIC
Trigger: ACAGATACCTGGGCTGCTGCACTCCGCATTCAGAAG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAAAAGGAGCTTTCTCATaGACTGCTGCAGAACCTAAT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAKGAFS*TAAEPN
Trigger: ATTAGGTTCTGCAGCAGTGCATGAGAAAGCTCCTTT...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTTGCGTTCAATGATTTaGTTCCACAGAACGTATCTG +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHLRSMI*FHRTYL
Trigger: CAGATACGTTCTGTGGAAGCAAATCATTGAACGCAA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGCGTAATAAACTCAACTaGAGTGAGAGGTTTATGAAT +
Preference number: 4 (lower is better)
Translates to: KGITAHAVVSGFAASAHLRNKLN*SERFMN
Trigger: ATTCATAAACCTCTCACTGCAGTTGAGTTTATTACG...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATCCGTTTCGGTGCAGATaGCATGGACCAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYPFRCR*HGPAFS
Trigger: AGAAAATGCTGGTCCATGCCATCTGCACCGAAACGG...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATTCCTCTTTGTACACTaGATTCATGCTGGTTATCGC +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAFLFVH*IHAGYR
Trigger: GCGATAACCAGCATGAATCCAGTGTACAAAGAGGAA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATAGAGAGACTCAAGCATaGTTCTTCAGAAAGGCATTA +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHRETQA*FFRKAL
Trigger: TAATGCCTTTCTGAAGAACCATGCTTGAGTCTCTCT...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCAGTTATATACAAACTTaGCGTGGATTAAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCSYIQT*RGLKLW
Trigger: CCACAGCTTTAATCCACGCCAAGTTTGTATATAACT...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
3UTR CAA 72 bp CGTAATAAACTCAACTGCAGTGAGAGGTTTATGAATTaGCCGCCGGATTCTCTGATCTGTGAGCACGCCTTT +
Preference number: 4 (lower is better)
Translates to: RNKLNCSERFMN*PPDSLICEHAF
Trigger: AAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCAAATTCATAAACCTCTCACTGCAGTTGAGTTTATTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATATGCCGGATCTGGTCTTaGAGGTTCTCCTTGATATCC +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYICRIWS*RFSLIS
Trigger: GGATATCAAGGAGAACCTTCAAGACCAGATCCGGCA...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATTCGTTTCTCCTCTTTaGTCAGTTCTGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAFVSPL*SVLDHS
Trigger: ACTATGATCCAGAACTGATCAAAGAGGAGAAACGAA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCATCTTGGATTGCTTTaGTCTATATTCTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCHLGLL*SIFLQI
Trigger: TATCTGCAAGAATATAGAGCAAAGCAATCCAAGATG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAACTTCTGAATGCGGAGTaGAGCAGCCCAGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQLLNAE*SSPGIC
Trigger: ACAGATACCTGGGCTGCTGCACTCCGCATTCAGAAG...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCCAGATTTCTTTGTATaGGTTACATCCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHPDFFV*VTSFLH
Trigger: ATGAAGGAAGGATGTAACGCATACAAAGAAATCTGG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATACCTTGAAGACTGCATaGAGCATCATTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYTLKTA*SIIWRP
Trigger: TGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGT...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATAACCTGATTTCTTTGTaGTTCAATCATCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHNLISL*FNHLLR
Trigger: CCTCAGAAGATGATTGAACCACAAAGAAATCAGGTT...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAATCAGTATTCGTTTCTaGGGGTGGACGAACTGGTCG +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIISIRF*GWTNWS
Trigger: CGACCAGTTCGTCCACCCCCAGAAACGAATACTGAT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAATTAAAGAGAGGAGGTaGATTCATACCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAIKERR*IHTQED
Trigger: ATCTTCCTGGGTATGAATCCACCTCCTCTCTTTAAT...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTTTTCTTCTTCCTCTTaGTTTGCTATGATATCCTCA +
Preference number: 4 (lower is better)
Translates to: YDEHPARCPAWERHNSTCFSSSS*FAMISS
Trigger: TGAGGATATCATAGCAAACCAAGAGGAAGAAGAAAA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACTCTTTGATCAGTTCTaGATCATAGTCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITALFDQF*IIVLRE
Trigger: TTCTCTCAGGACTATGATCCAGAACTGATCAAAGAG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATATTTTCTTTGGCGAGTTaGGGTCCTCTCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIFSLAS*GPLHPR
Trigger: TCTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAA...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAGGTGAATCTTTTCTTTaGCGAGTTGGGGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIGESFL*RVGVLS
Trigger: GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACC...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATAGGGCTTCTTGGGTCTaGTGCCACATCTTATTATAC +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYRASWV*CHILLY
Trigger: GTATAATAAGATGTGGCATCAGACCCAAGAAGCCCT...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACTGTCCGCTAATATTTaGGCAAGAATTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITALSANI*ARIFSL
Trigger: AAGAGAGAAAATTCTTGCTCAAATATTAGCGGACAG...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATATCAGTTTCCTTACGTTaGTGGAAACGTCGCCAAACC +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYISVSLR*WKRRQT
Trigger: GGTTTGGCGACGTTTCCATCAACGTAAGGAAACTGA...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATCTTGAAGGTTCTCCTTaGTATCCACGCCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYLEGSP*YPRLLS
Trigger: TGATAGAAGGCGTGGATATCAAGGAGAACCTTCAAG...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGCAGTGAGAGGTTTATaGATTTGCCGCCGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQAVRGL*ICRRIL
Trigger: GAGAATCCGGCGGCAAATTCATAAACCTCTCACTGC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAACTGCGAGAATCTTCTaGTTCGGGCAGGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQTARIF*FGQEKV
Trigger: CACCTTTTCCTGCCCGAAGCAGAAGATTCTCGCAGT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR GCA 90 bp AGGTTTATGAATTTGCCGCCGGATTCTCTGATCTGTGAGCACGCCTTTAACCACCCAGATTTCTTTGTATaGGTTACATCCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RFMNLPPDSLICEHAFNHPDFFV*VTSFLH
Trigger: ATGAAGGAAGGATGTAACGCATACAAAGAAATCTGG...GTGGTTAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCAAATTCATAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR GCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGTCCTTTTTCTTTCCTaGTTTCACTGGGCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQVLFLS*FHWALP
Trigger: AGGGAGCGCCCAGTGAAAGCAGGAAAGAAAAAGGAC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAACCTTGAAGACTGCATaGAGCATCATTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYITLKTA*SIIWRP
Trigger: TGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAAGCCACCTTGAAGACTaGATGCAGCATCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYISHLED*MQHHLE
Trigger: CTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCGTAATAAACTCAACTaGAGTGAGAGGTTTATGAAT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHRNKLN*SERFMN
Trigger: ATTCATAAACCTCTCACTGCAGTTGAGTTTATTACG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAAACCTGATTTCTTTGTaGTTCAATCATCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITANLISL*FNHLLR
Trigger: CCTCAGAAGATGATTGAACCACAAAGAAATCAGGTT...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATCTTGCCAAGCATCTTaGATTGCTTTGCTCTATATT +
Preference number: 4 (lower is better)
Translates to: KVMMNTQLGVQPGKGITASCQAS*IALLYI
Trigger: AATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTCCACCTTTTCAGCCTaGATTACTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYSTFSA*ITVALT
Trigger: AGTCAGTGCTACAGTAATCCAGGCTGAAAAGGTGGA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTTTTCTTCTTCCTCTTaGTTTGCTATGATATCCTCA +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHFSSSS*FAMISS
Trigger: TGAGGATATCATAGCAAACCAAGAGGAAGAAGAAAA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGGTTCATTCTACTTGTaGACCTTTTCAAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHGSFYL*TFSSFS
Trigger: AGAAAAACTTGAAAAGGTCCACAAGTAGAATGAACC...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATCGACTATATGTCCTTaGGTGAAGCCGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQSTICP*VKPSVT
Trigger: GGTCACTGACGGCTTCACCCAAGGACATATAGTCGA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGAGTTATATACAAACTTaGCGTGGATTAAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLSYIQT*RGLKLW
Trigger: CCACAGCTTTAATCCACGCCAAGTTTGTATATAACT...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAAGGGCTTCTTGGGTCTaGTGCCACATCTTATTATAC +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIRASWV*CHILLY
Trigger: GTATAATAAGATGTGGCATCAGACCCAAGAAGCCCT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAAATAATGGAACTCCGTaGGTTCCAGCTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQNNGTP*VPAPPS
Trigger: AGATGGTGGAGCTGGAACTCACGGAGTTCCATTATT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACTTGAAGGTTCTCCTTaGTATCCACGCCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYILEGSP*YPRLLS
Trigger: TGATAGAAGGCGTGGATATCAAGGAGAACCTTCAAG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAAATTTCTGCATTCGATaGACCAATGCCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYINFCIR*TNAGSG
Trigger: ACCAGATCCGGCATTGGTTCATCGAATGCAGAAATT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACTCCATTGCGTTCAATaGTTTGCTTCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYILHCVQ*FASTER
Trigger: ACGTTCTGTGGAAGCAAATCATTGAACGCAATGGAG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATATTTGGAGGCCATTTTTaGCAGGGTATTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIFGGHF*QGISQQ
Trigger: TTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAA...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATGCGTTCGACATTGCTaGCTACTTTCCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQCVRHC*LLSLFS
Trigger: GGAAAAGAGGGAAAGTAGCCAGCAATGTCGAACGCA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATATATACAGAGACTCGATaGTCCTGTCAGCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIYTETR*SCQLSD
Trigger: ATCTGACAGCTGACAGGACCATCGAGTCTCTGTATA...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTTGACTTTCAGAGCCTaGATCAGTAATCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYLTFRA*ISNPSS
Trigger: GGAAGAAGGATTACTGATCCAGGCTCTGAAAGTCAA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTTCCTCTTTGTACACTaGATTCATGCTGGTTATCGC +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYFLFVH*IHAGYR
Trigger: GCGATAACCAGCATGAATCCAGTGTACAAAGAGGAA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATGGTTCAATCATCTTCTaGGGCTCTTTATCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYGSIIF*GSLSSK
Trigger: TTTACTCGATAAAGAGCCTCAGAAGATGATTGAACC...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAGATAGATTTGCTTCATaGATAAAGCCCTTAGGCGAC +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIDRFAS*IKPLGD
Trigger: GTCGCCTAAGGGCTTTATTCATGAAGCAAATCTATC...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTTCGTTTCTCCTCTTTaGTCAGTTCTGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: EESNLERLWRVSRVNFSYFVSPL*SVLDHS
Trigger: ACTATGATCCAGAACTGATCAAAGAGGAGAAACGAA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAAAAGGAGCTTTCTCATaGACTGCTGCAGAACCTAAT +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIKGAFS*TAAEPN
Trigger: ATTAGGTTCTGCAGCAGTGCATGAGAAAGCTCCTTT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATTTGGAGGCCATTTTTaGCAGGGTATTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQFGGHF*QGISQQ
Trigger: TTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATCCACCTTTTCAGCCTaGATTACTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQSTFSA*ITVALT
Trigger: AGTCAGTGCTACAGTAATCCAGGCTGAAAAGGTGGA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAACTTTGCAGAAAGATTaGAGTTCAGCATCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYITLQKD*SSASKG
Trigger: TCCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACATCAACCTGTATCCTaGTCTCTGACTGTAATTCTT +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIHQPVS*SLTVIL
Trigger: AAGAATTACAGTCAGAGATCAGGATACAGGTTGATG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR GCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACCAAGCATCTTGGATTaGTTTGCTCTATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIPSILD*FALYSC
Trigger: GCAAGAATATAGAGCAAAGCAATCCAAGATGCTTGG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATCTGGAAGCATAGTCTaGTCTGGGCACCAAAATAAT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQSGSIV*SGHQNN
Trigger: ATTATTTTGGTGCCCAGACCAGACTATGCTTCCAGA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGGTTCAATCATCTTCTaGGGCTCTTTATCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQGSIIF*GSLSSK
Trigger: TTTACTCGATAAAGAGCCTCAGAAGATGATTGAACC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACTGTCCGCTAATATTTaGGCAAGAATTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYILSANI*ARIFSL
Trigger: AAGAGAGAAAATTCTTGCTCAAATATTAGCGGACAG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATTCGTTTCTCCTCTTTaGTCAGTTCTGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQFVSPL*SVLDHS
Trigger: ACTATGATCCAGAACTGATCAAAGAGGAGAAACGAA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAACATCAACCTGTATCCTaGTCTCTGACTGTAATTCTT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQHQPVS*SLTVIL
Trigger: AAGAATTACAGTCAGAGATCAGGATACAGGTTGATG...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR TCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAGGAGGGTGTCAAGAGTaGATTTCAGTTATATACAAA +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIGGCQE*ISVIYK
Trigger: TTTGTATATAACTGAAATTCACTCTTGACACCCTCC...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAACTCTTTGATCAGTTCTaGATCATAGTCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQLFDQF*IIVLRE
Trigger: TTCTCTCAGGACTATGATCCAGAACTGATCAAAGAG...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAAGTTATATACAAACTTaGCGTGGATTAAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ESNLERLWRVSRVNFSYISYIQT*RGLKLW
Trigger: CCACAGCTTTAATCCACGCCAAGTTTGTATATAACT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATCTTGCCAAGCATCTTaGATTGCTTTGCTCTATATT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQSCQAS*IALLYI
Trigger: AATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATATACAAACTTGGCGTaGATTAAAGCTGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQYTNLA*IKAVES
Trigger: ACTTTCCACAGCTTTAATCCACGCCAAGTTTGTATA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CCA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATTTTCTTCTTCCTCTTaGTTTGCTATGATATCCTCA +
Preference number: 4 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQFSSSS*FAMISS
Trigger: TGAGGATATCATAGCAAACCAAGAGGAAGAAGAAAA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS TCA 90 bp GAGAAACCAGGACTGCGAGAATCTTCTGCTTCGGGCAGGAAAAGGTaGGGCCGGGTTTGCTTCGCAGGCACGGAGCGCGCAGGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: EKPGLRESSASGRKR*GRVCFAGTERAGAE
Trigger: CTCTGCGCCTGCGCGCTCCGTGCCTGCGAAGCAAACCCGGCCTCACCTTTTCCTGCCCGAAGCAGAAGATTCTCGCAGTCCTGGTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254653.9
ENST00000309507.9
CDS GCA 90 bp TGGCTACTTTCCCTCTTTTCCTCGCCCTCCGGGAAGCTCTTCCGTTaGTCTCTGAAGGACGGTGGCAGCAGGGGTCAGGGCACTACCAGG +
Preference number: 5 (lower is better)
Translates to: WLLSLFSSPSGKLFR*SLKDGGSRGQGTTR
Trigger: CCTGGTAGTGCCCTGACCCCTGCTGCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCGGAGGGCGAGGAAAAGAGGGAAAGTAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS TCA 90 bp TTTCCCTCTTTTCCTCGCCCTCCGGGAAGCTCTTCCGTTGCTCTCTaGAGGACGGTGGCAGCAGGGGTCAGGGCACTACCAGGAGCTACA +
Preference number: 5 (lower is better)
Translates to: FPSFPRPPGSSSVAL*RTVAAGVRALPGAT
Trigger: TGTAGCTCCTGGTAGTGCCCTGACCCCTGCTGCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCGGAGGGCGAGGAAAAGAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS CCA 90 bp TTGGGCCACGAGCTATTGCAGCAGTTCACTCCCACTGTCCTCTTTTaGGGGGTCCTTGGCCCTGTGGGTGAGCTGAGCTGCTGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LGHELLQQFTPTVLF*GVLGPVGELSCWER
Trigger: CCTTTCCCAGCAGCTCAGCTCACCCACAGGGCCAAGGACCCCCCAAAAGAGGACAGTGGGAGTGAACTGCTGCAATAGCTCGTGGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CCA 90 bp GGCAGCAGGGGTCAGGGCACTACCAGGAGCTACAGAGGATTTGGGTaGGGGGTCTTCTGGAGGGAGAAACCAGGACTGCGAGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: GSRGQGTTRSYRGFG*GVFWREKPGLRESS
Trigger: AGAAGATTCTCGCAGTCCTGGTTTCTCCCTCCAGAAGACCCCCCACCCAAATCCTCTGTAGCTCCTGGTAGTGCCCTGACCCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAAAGGTGAGGCCGGGTTaGCTTCGCAGGCACGGAGCG +
Preference number: 5 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPKVRPG*LRRHGA
Trigger: CGCTCCGTGCCTGCGAAGCAAACCCGGCCTCACCTT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCGGGAAGCTCTTCCGTaGCTCTCTGAAGGACGGTGG +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHREALP*LSEGRW
Trigger: CCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGGACAAGTTGAAGAGGTaGGCTCCCGTTTCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWDKLKR*APVSVQ
Trigger: CTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTC...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTCTTTTCTTTGGCGAGTaGGGGTCCTCTCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: SASKGRRVVPTIRIRSSGLFFGE*GSSPSQ
Trigger: CTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAAG...ACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGGAGGAAGAGTCCAACTaGGAAAGACTGTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWEEESN*ERLWRV
Trigger: CACCCTCCACAGTCTTTCCAAGTTGGACTCTTCCTC...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS TCA 90 bp TCTTCAGCTCCAGGATGCGGCCCATCACCCCGTCCAGGACTTTCCTaGTCAGTATTCGTTTCTGGGGGTGGACGAACTGGTCGTAGACAT +
Preference number: 5 (lower is better)
Translates to: SSAPGCGPSPRPGLS*SVFVSGGGRTGRRH
Trigger: ATGTCTACGACCAGTTCGTCCACCCCCAGAAACGAATACTGATCAGGAAAGTCCTGGACGGGGTGATGGGCCGCATCCTGGAGCTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAAAGGTGAGGCCGGGTTaGCTTCGCAGGCACGGAGCG +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAKVRPG*LRRHGA
Trigger: CGCTCCGTGCCTGCGAAGCAAACCCGGCCTCACCTT...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTGCATGCAGCATCATTaGGAGGCCATTTTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWCMQHH*EAIFAR
Trigger: CCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACAGCTGTCGAGCCACCTaGAAGACTGCATGCAGCATC +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHSCRAT*KTACSI
Trigger: GATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGCT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTTTTCTTTGGCGAGTaGGGGTCCTCTCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHLFFGE*GSSPSQ
Trigger: CTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAAG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGGACAAGTTGAAGAGGTaGGCTCCCGTTTCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: KGITAHAVVSGFAASAHLDKLKR*APVSVQ
Trigger: CTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTC...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCGACAAGTTGAAGAGGTaGGCTCCCGTTTCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSDKLKR*APVSVQ
Trigger: CTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTC...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TGGAGTTCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATTAGAGGAGGACAAGTaGAAGAGGTTGGCTCCCGTT +
Preference number: 5 (lower is better)
Translates to: WSSASKGRRVVPTIRIRSLEEDK*KRLAPV
Trigger: AACGGGAGCCAACCTCTTCAACTTGTCCTCCTCTAA...TGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGAACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCAGCTGTCGAGCCACCTaGAAGACTGCATGCAGCATC +
Preference number: 5 (lower is better)
Translates to: LQAGNGESFLWRVGVLSISCRAT*KTACSI
Trigger: GATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGCT...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGGTGAGGACTCCTCCATaGCGTTCAATGATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWVRTPP*RSMICF
Trigger: GAAGCAAATCATTGAACGCAATGGAGGAGTCCTCAC...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCCTTTTCTTTGGCGAGTaGGGGTCCTCTCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSLFFGE*GSSPSQ
Trigger: CTGGGATGGAGAGGACCCCAACTCGCCAAAGAAAAG...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGCGGGAAGCTCTTCCGTaGCTCTCTGAAGGACGGTGG +
Preference number: 5 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLREALP*LSEGRW
Trigger: CCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCG...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTACATTGCGTTCGACATaGCTGGCTACTTTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGTLRST*LATFPL
Trigger: AAGAGGGAAAGTAGCCAGCAATGTCGAACGCAATGT...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCAGCACCGAGGGCTTCTaGGGTCTGATGCCACATCTT +
Preference number: 5 (lower is better)
Translates to: YDEHPARCPAWERHNSTCSTEGF*GLMPHL
Trigger: AAGATGTGGCATCAGACCCAAGAAGCCCTCGGTGCT...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGAACTTTAGGTCATTCTaGATGGTAACCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWNFRSF*MVTRAS
Trigger: GGAAGCCCTGGTTACCATCAAGAATGACCTAAAGTT...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTATGCCGGATCTGGTCTaGAAGGTTCTCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGMPDLV*KVLLDI
Trigger: GATATCAAGGAGAACCTTCAAGACCAGATCCGGCAT...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp TGTCCTTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCATTTTCCCTTTGTCCTTaGCCTTTTCTGTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: CPWVKPSVTFARQLTFKAFSLCP*PFLCCL
Trigger: GAGGCAGCACAGAAAAGGCAAAGGACAAAGGGAAAA...TGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp GACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGAGGAAGAGTCCAACTaGGAAAGACTGTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: DAVWSPQSESGHLVSGVSEEESN*ERLWRV
Trigger: CACCCTCCACAGTCTTTCCAAGTTGGACTCTTCCTC...TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS TCA 90 bp CACACCACGGAGGGCTGGAGCTGTCGAGCCACCAAGAATGTCAGGTaGCCATCCCATGATGGGCAGGTGGTTGTTTTCTGTATTTCTATA +
Preference number: 5 (lower is better)
Translates to: HTTEGWSCRATKNVR*PSHDGQVVVFCISI
Trigger: TATAGAAATACAGAAAACAACCACCTGCCCATCATGGGATGGTCACCTGACATTCTTGGTGGCTCGACAGCTCCAGCCCTCCGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409100.1
CDS CCA 90 bp GGCTGGAGCTGTCGAGCCACCTTGAAGACTGCATGCAGCATCATTTaGAGGCCATTTTTGCCAGGGTATTTCCCAGCAATGTTAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GWSCRATLKTACSII*RPFLPGYFPAMLEE
Trigger: CTCCTCTAACATTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGCTCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACACATTGCGTTCGACATaGCTGGCTACTTTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHTLRST*LATFPL
Trigger: AAGAGGGAAAGTAGCCAGCAATGTCGAACGCAATGT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATAGCACCGAGGGCTTCTaGGGTCTGATGCCACATCTT +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHSTEGF*GLMPHL
Trigger: AAGATGTGGCATCAGACCCAAGAAGCCCTCGGTGCT...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACATGCCGGATCTGGTCTaGAAGGTTCTCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHMPDLV*KVLLDI
Trigger: GATATCAAGGAGAACCTTCAAGACCAGATCCGGCAT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTGCATGCAGCATCATTaGGAGGCCATTTTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LQAGNGESFLWRVGVLSICMQHH*EAIFAR
Trigger: CCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTGCATGCAGCATCATTaGGAGGCCATTTTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSCMQHH*EAIFAR
Trigger: CCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTTACCCAGAGGAGTTTaGGCATACCAGTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWLPRGV*AYQFLK
Trigger: CTTTAAGAACTGGTATGCCAAAACTCCTCTGGGTAA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAAAGGTGAGGCCGGGTTaGCTTCGCAGGCACGGAGCG +
Preference number: 5 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIKVRPG*LRRHGA
Trigger: CGCTCCGTGCCTGCGAAGCAAACCCGGCCTCACCTT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTGCCAAGCATCTTGGATaGCTTTGCTCTATATTCTTG +
Preference number: 5 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGAKHLG*LCSIFL
Trigger: CAAGAATATAGAGCAAAGCAATCCAAGATGCTTGGC...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTTCATCCAGATTTCTTaGTATGCGTTACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWFIQIS*YALHPS
Trigger: GGAAGGATGTAACGCATACAAAGAAATCTGGATGAA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATTTGGAGGCCATTTTaGCCAGGGTATTTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSIWRPF*PGYFPA
Trigger: TGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAAT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AGGTTTATGAATTTGCCGCCGGATTCTCTGATCTGTGAGCACGCCTTTAACCACAGCTGTCGAGCCACCTaGAAGACTGCATGCAGCATC +
Preference number: 5 (lower is better)
Translates to: RFMNLPPDSLICEHAFNHSCRAT*KTACSI
Trigger: GATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGCT...GTGGTTAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCAAATTCATAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACAACTTTGCAGAAAGATaGGAGTTCAGCATCGAAGGG +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHNFAER*EFSIEG
Trigger: CCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGTT...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTTTTCCCTTTGTCCTTaGCCTTTTCTGTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIFSLCP*PFLCCL
Trigger: GAGGCAGCACAGAAAAGGCAAAGGACAAAGGGAAAA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CCA 90 bp CTTCCTCTGTTCCACTCAAGATACCTGGAGTTCACTTCAATTCCTTaGTCTCCTGTTTCTTCCACACGCTGTCAGCCAGGCAAGTCATCC +
Preference number: 5 (lower is better)
Translates to: LPLFHSRYLEFTSIP*SPVSSTRCQPGKSS
Trigger: GGATGACTTGCCTGGCTGACAGCGTGTGGAAGAAACAGGAGACCAAGGAATTGAAGTGAACTCCAGGTATCTTGAGTGGAACAGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467572.5
CDS-3UTR CAA 90 bp TTGGGTGAAGCCGTCAGTGACCTTCGCCAGGCAGCTGACATTCAAGGCACTGGTACATCTTATTATACATaGCGTTCGACATTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGEAVSDLRQAADIQGTGTSYYT*RSTLLA
Trigger: AGCCAGCAATGTCGAACGCAATGTATAATAAGATGT...ACCAGTGCCTTGAATGTCAGCTGCCTGGCGAAGGTCACTGACGGCTTCACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGGAAAACCTGATTTCTTaGTGGTTCAATCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWENLIS*WFNHLL
Trigger: CAGAAGATGATTGAACCACAAAGAAATCAGGTTTTC...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTTCAGTTTCCTTACGTaGATGGAAACGTCGCCAAAC +
Preference number: 5 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIFSFLT*METSPN
Trigger: GTTTGGCGACGTTTCCATCAACGTAAGGAAACTGAA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGTTCAGTTTCCTTACGTaGATGGAAACGTCGCCAAAC +
Preference number: 5 (lower is better)
Translates to: KGITAHAVVSGFAASAHLFSFLT*METSPN
Trigger: GTTTGGCGACGTTTCCATCAACGTAAGGAAACTGAA...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAACTTTAGGTCATTCTaGATGGTAACCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSNFRSF*MVTRAS
Trigger: GGAAGCCCTGGTTACCATCAAGAATGACCTAAAGTT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGAACTTTAGGTCATTCTaGATGGTAACCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KGITAHAVVSGFAASAHLNFRSF*MVTRAS
Trigger: GGAAGCCCTGGTTACCATCAAGAATGACCTAAAGTT...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCATGCCGGATCTGGTCTaGAAGGTTCTCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: YDEHPARCPAWERHNSTCMPDLV*KVLLDI
Trigger: GATATCAAGGAGAACCTTCAAGACCAGATCCGGCAT...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CACCTGCACACTGCTAAGTTCCTTCCCCTGAGGGCTTCTTCAGGCGGGCAATGGTTTTTCTTCTTCCTCTaGGTTTGCTATGATATCCTC +
Preference number: 5 (lower is better)
Translates to: HLHTAKFLPLRASSGGQWFFFFL*VCYDIL
Trigger: GAGGATATCATAGCAAACCAAGAGGAAGAAGAAAAA...CCATTGCCCGCCTGAAGAAGCCCTCAGGGGAAGGAACTTAGCAGTGTGCAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAATTTGGAGGCCATTTTaGCCAGGGTATTTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPIWRPF*PGYFPA
Trigger: TGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAAT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTGCATGCAGCATCATTaGGAGGCCATTTTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHCMQHH*EAIFAR
Trigger: CCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAACTTTGCAGAAAGATaGGAGTTCAGCATCGAAGGG +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSNFAER*EFSIEG
Trigger: CCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGTT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCAGCATCGAAGGGACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTATTGCGTTCAATGATTaGCTTCCACAGAACGTATCT +
Preference number: 5 (lower is better)
Translates to: SASKGRRVVPTIRIRSSGIAFND*LPQNVS
Trigger: AGATACGTTCTGTGGAAGCAAATCATTGAACGCAAT...ACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTCCCTTCGATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTTCGACTATATGTCCTaGGGTGAAGCCGTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHFDYMS*GEAVSD
Trigger: GTCACTGACGGCTTCACCCAAGGACATATAGTCGAA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCGAGAGGTTTATGAATTaGCCGCCGGATTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: YDEHPARCPAWERHNSTCERFMN*PPDSLI
Trigger: GATCAGAGAATCCGGCGGCAAATTCATAAACCTCTC...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTTTTCCCTTTGTCCTTaGCCTTTTCTGTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: YDEHPARCPAWERHNSTCFSLCP*PFLCCL
Trigger: GAGGCAGCACAGAAAAGGCAAAGGACAAAGGGAAAA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAGAGGAAGAGTCCAACTaGGAAAGACTGTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAEEESN*ERLWRV
Trigger: CACCCTCCACAGTCTTTCCAAGTTGGACTCTTCCTC...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CCA 90 bp TGCTTTATCTGCACCTCATTCCGCAGGCGGTCCACCTTTTCAGCCTaGATTACTGTAGCACTGACTTCATTAAAGAGAGGAGGTGGATTC +
Preference number: 5 (lower is better)
Translates to: CFICTSFRRRSTFSA*ITVALTSLKRGGGF
Trigger: GAATCCACCTCCTCTCTTTAATGAAGTCAGTGCTACAGTAATCCAGGCTGAAAAGGTGGACCGCCTGCGGAATGAGGTGCAGATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGGCCAAGCATCTTGGATaGCTTTGCTCTATATTCTTG +
Preference number: 5 (lower is better)
Translates to: KGITAHAVVSGFAASAHLAKHLG*LCSIFL
Trigger: CAAGAATATAGAGCAAAGCAATCCAAGATGCTTGGC...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATTCAGTTTCCTTACGTaGATGGAAACGTCGCCAAAC +
Preference number: 5 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPFSFLT*METSPN
Trigger: GTTTGGCGACGTTTCCATCAACGTAAGGAAACTGAA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTACATCCTTCCTTCATaGCAGGAAGAAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHYILPS*QEEKDL
Trigger: CAAGTCTTTTTCTTCCTGCAATGAAGGAAGGATGTA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATTAGAGGAGGACAAGTaGAAGAGGTTGGCTCCCGTT +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITALEEDK*KRLAPV
Trigger: AACGGGAGCCAACCTCTTCAACTTGTCCTCCTCTAA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGGATTTGGAGGCCATTTTaGCCAGGGTATTTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VVPTIRIRSSGFRSFRIWIWRPF*PGYFPA
Trigger: TGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAAT...CCAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATATTTGGAGGCCATTTTaGCCAGGGTATTTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHIWRPF*PGYFPA
Trigger: TGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAAT...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp ATTCAAGGCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTTGCTTCCACAGTTCGACTATATGTCCTaGGGTGAAGCCGTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: IQGTGEDSSIAFNDLLPQFDYMS*GEAVSD
Trigger: GTCACTGACGGCTTCACCCAAGGACATATAGTCGAA...CTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCCTTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp ACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGTTACCCAGAGGAGTTTaGGCATACCAGTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: TPCGPHNQNPVIWFQEFQLPRGV*AYQFLK
Trigger: CTTTAAGAACTGGTATGCCAAAACTCCTCTGGGTAA...CTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTTACCCAGAGGAGTTTaGGCATACCAGTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSLPRGV*AYQFLK
Trigger: CTTTAAGAACTGGTATGCCAAAACTCCTCTGGGTAA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTTTTCCCTTTGTCCTTaGCCTTTTCTGTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHFSLCP*PFLCCL
Trigger: GAGGCAGCACAGAAAAGGCAAAGGACAAAGGGAAAA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCAGTTATATACAAACTaGGCGTGGATTAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHQLYTN*AWIKAV
Trigger: CACAGCTTTAATCCACGCCAAGTTTGTATATAACTG...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACTTCGTCTTCTTCCTGTaGTATGGTCTTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHFVFFL*YGLVRK
Trigger: TTTTCTGACAAGACCATACAACAGGAAGAAGACGAA...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309507.9
CDS CCA 90 bp CTCCTGTTTCTTCCACACGCTGTCAGCCAGGCAAGTCATCCTTTGTaGTATCTCTTGCATCCTTCGAGATGTCTCTTGCGTCTATTTCAT +
Preference number: 5 (lower is better)
Translates to: LLFLPHAVSQASHPL*YLLHPSRCLLRLFH
Trigger: ATGAAATAGACGCAAGAGACATCTCGAAGGATGCAAGAGATACCACAAAGGATGACTTGCCTGGCTGACAGCGTGTGGAAGAAACAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467572.5
CDS CCA 90 bp CCAAAAATGTTTGTAAAGCGCTTGGAAGTGCAGCAGCCCGGCACTTaGTGGGGACTTGACTTTCTGTGGCTGTGTTACTGTTGTTATTAC +
Preference number: 5 (lower is better)
Translates to: PKMFVKRLEVQQPGT*WGLDFLWLCYCCYY
Trigger: GTAATAACAACAGTAACACAGCCACAGAAAGTCAAGTCCCCACCAAGTGCCGGGCTGCTGCACTTCCAAGCGCTTTACAAACATTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGACATCTTATTATACATaGCGTTCGACATTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KGITAHAVVSGFAASAHLTSYYT*RSTLLA
Trigger: AGCCAGCAATGTCGAACGCAATGTATAATAAGATGT...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp GGGAAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACGAAAACCTGATTTCTTaGTGGTTCAATCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: GKGITAHAVVSGFAASAHENLIS*WFNHLL
Trigger: CAGAAGATGATTGAACCACAAAGAAATCAGGTTTTC...GTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGGCATAACAGCACATGCAGTGGTTAGCGGGTTTGCGGCATCAGCTCACCTGGCATCTTGGATTGCTTaGCTCTATATTCTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: KGITAHAVVSGFAASAHLASWIA*LYILAD
Trigger: ATCTGCAAGAATATAGAGCAAAGCAATCCAAGATGC...CAGGTGAGCTGATGCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGGAACTTTAGGTCATTCTaGATGGTAACCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VVPTIRIRSSGFRSFRIWNFRSF*MVTRAS
Trigger: GGAAGCCCTGGTTACCATCAAGAATGACCTAAAGTT...CCAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTACATCCTTCCTTCATaGCAGGAAGAAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIYILPS*QEEKDL
Trigger: CAAGTCTTTTTCTTCCTGCAATGAAGGAAGGATGTA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATCTTCATCCAGATTTCTTaGTATGCGTTACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: LQAGNGESFLWRVGVLSIFIQIS*YALHPS
Trigger: GGAAGGATGTAACGCATACAAAGAAATCTGGATGAA...GATGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCTTCATCCAGATTTCTTaGTATGCGTTACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSFIQIS*YALHPS
Trigger: GGAAGGATGTAACGCATACAAAGAAATCTGGATGAA...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp CTTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATTGCGTTCAATGATTaGCTTCCACAGAACGTATCT +
Preference number: 5 (lower is better)
Translates to: LLQAGNGESFLWRVGVLSIAFND*LPQNVS
Trigger: AGATACGTTCTGTGGAAGCAAATCATTGAACGCAAT...GGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGGTGAGGACTCCTCCATaGCGTTCAATGATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: CGPHNQNPVIWFQEFQDLVRTPP*RSMICF
Trigger: GAAGCAAATCATTGAACGCAATGGAGGAGTCCTCAC...CAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAGTGAGGACTCCTCCATaGCGTTCAATGATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAVRTPP*RSMICF
Trigger: GAAGCAAATCATTGAACGCAATGGAGGAGTCCTCAC...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AGGTTTATGAATTTGCCGCCGGATTCTCTGATCTGTGAGCACGCCTTTAACCACGAGAGGTTTATGAATTaGCCGCCGGATTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: RFMNLPPDSLICEHAFNHERFMN*PPDSLI
Trigger: GATCAGAGAATCCGGCGGCAAATTCATAAACCTCTC...GTGGTTAAAGGCGTGCTCACAGATCAGAGAATCCGGCGGCAAATTCATAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATCTCTCTTCTTCCTCTTaGTACACTGGATTCATGCTG +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHLSSSS*YTGFML
Trigger: CAGCATGAATCCAGTGTACAAAGAGGAAGAAGAGAG...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CCA 90 bp ATGGCCTATAATGTAACTATGAACCAAGCTGGAGAATCTGGCTTTTaGGCCACGAGCTATTGCAGCAGTTCACTCCCACTGTCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: MAYNVTMNQAGESGF*ATSYCSSSLPLSSF
Trigger: AAAAGAGGACAGTGGGAGTGAACTGCTGCAATAGCTCGTGGCCCAAAAGCCAGATTCTCCAGCTTGGTTCATAGTTACATTATAGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS-3UTR CAA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCTTCTTGCCAAGCATCTaGGATTGCTTTGCTCTATAT +
Preference number: 5 (lower is better)
Translates to: YDEHPARCPAWERHNSTCFLPSI*DCFALY
Trigger: ATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGAA...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GACGCCGTGTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCATTTTTCTTCTTCCTCTaGGTTTGCTATGATATCCTC +
Preference number: 5 (lower is better)
Translates to: DAVWSPQSESGHLVSGVSFFFFL*VCYDIL
Trigger: GAGGATATCATAGCAAACCAAGAGGAAGAAGAAAAA...TGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCACACGGCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATACATCCTTCCTTCATaGCAGGAAGAAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPYILPS*QEEKDL
Trigger: CAAGTCTTTTTCTTCCTGCAATGAAGGAAGGATGTA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCATTCATCCAGATTTCTTaGTATGCGTTACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPFIQIS*YALHPS
Trigger: GGAAGGATGTAACGCATACAAAGAAATCTGGATGAA...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCATTGCGTTCAATGATTaGCTTCCACAGAACGTATCT +
Preference number: 5 (lower is better)
Translates to: YDEHPARCPAWERHNSTCIAFND*LPQNVS
Trigger: AGATACGTTCTGTGGAAGCAAATCATTGAACGCAAT...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCCAGTTATATACAAACTaGGCGTGGATTAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: YDEHPARCPAWERHNSTCQLYTN*AWIKAV
Trigger: CACAGCTTTAATCCACGCCAAGTTTGTATATAACTG...GCATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CCA 90 bp AAAATGTTTGTAAAGCGCTTGGAAGTGCAGCAGCCCGGCACTTGGTaGGGACTTGACTTTCTGTGGCTGTGTTACTGTTGTTATTACAAT +
Preference number: 5 (lower is better)
Translates to: KMFVKRLEVQQPGTW*GLDFLWLCYCCYYN
Trigger: ATTGTAATAACAACAGTAACACAGCCACAGAAAGTCAAGTCCCCACCAAGTGCCGGGCTGCTGCACTTCCAAGCGCTTTACAAACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CCA 90 bp AATTTGACCCTTATTCTTTCCCCCTCAGCAACTGTAAACACGCATTaGTTGACTAGAGTCCTTCAGATGAGTCCTGGGTGTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: NLTLILSPSATVNTH*LTRVLQMSPGCSLV
Trigger: AACCAGAGAACACCCAGGACTCATCTGAAGGACTCTAGTCAACCAATGCGTGTTTACAGTTGCTGAGGGGGAAAGAATAAGGGTCAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATACATCTTATTATACATaGCGTTCGACATTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHTSYYT*RSTLLA
Trigger: AGCCAGCAATGTCGAACGCAATGTATAATAAGATGT...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAAGCACCGAGGGCTTCTaGGGTCTGATGCCACATCTT +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQSTEGF*GLMPHL
Trigger: AAGATGTGGCATCAGACCCAAGAAGCCCTCGGTGCT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATGCATCTTGGATTGCTTaGCTCTATATTCTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHASWIA*LYILAD
Trigger: ATCTGCAAGAATATAGAGCAAAGCAATCCAAGATGC...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GTGGTCCCCACAATCAGAATCCGGTCATCTGGTTTCAGGAGTTTCAGGATTTGGTTCTTGCCAAGCATCTaGGATTGCTTTGCTCTATAT +
Preference number: 5 (lower is better)
Translates to: VVPTIRIRSSGFRSFRIWFLPSI*DCFALY
Trigger: ATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGAA...CCAAATCCTGAAACTCCTGAAACCAGATGACCGGATTCTGATTGTGGGGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254653.9
CDS-3UTR CAA 90 bp GTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCACATTTCTTGCCAAGCATCTaGGATTGCTTTGCTCTATAT +
Preference number: 5 (lower is better)
Translates to: VMMNTQLGVQPGKGITAHFLPSI*DCFALY
Trigger: ATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGAA...ATGTGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TTCTTCAGGCGGGCAATGGTGAATCTTTTCTTTGGCGAGTTGGGGTCCTCTCCAATCCTCAATAACCTGTaGTATGGTCTTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: FFRRAMVNLFFGELGSSPILNNL*YGLVRK
Trigger: TTTTCTGACAAGACCATACAACAGGTTATTGAGGAT...TGGAGAGGACCCCAACTCGCCAAAGAAAAGATTCACCATTGCCCGCCTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGACAAGTTGAAGAGGTaGGCTCCCGTTTCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQDKLKR*APVSVQ
Trigger: CTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTTAGAGGAGGACAAGTaGAAGAGGTTGGCTCCCGTT +
Preference number: 5 (lower is better)
Translates to: EESNLERLWRVSRVNFSYLEEDK*KRLAPV
Trigger: AACGGGAGCCAACCTCTTCAACTTGTCCTCCTCTAA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAAGCTGTCGAGCCACCTaGAAGACTGCATGCAGCATC +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQSCRAT*KTACSI
Trigger: GATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGCT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATTTCGACTATATGTCCTaGGGTGAAGCCGTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: EESNLERLWRVSRVNFSYFDYMS*GEAVSD
Trigger: GTCACTGACGGCTTCACCCAAGGACATATAGTCGAA...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS TCA 90 bp TCTTGGATTGCTTTGCTCTATATTCTTGCAGATAGATTTGCTTCATaGATAAAGCCCTTAGGCGACCTTGCCGTGCCCTCTCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: SWIALLYILADRFAS*IKPLGDLAVPSQQS
Trigger: AGATTGCTGAGAGGGCACGGCAAGGTCGCCTAAGGGCTTTATTCATGAAGCAAATCTATCTGCAAGAATATAGAGCAAAGCAATCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS TCA 90 bp CCGGTTAAATTTCTGCATTCGATGAACCAATGCCGGATCTGGTCTTaGAGGTTCTCCTTGATATCCACGCCTTCTATCAACTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: PVKFLHSMNQCRIWS*RFSLISTPSINFRS
Trigger: TGACCTAAAGTTGATAGAAGGCGTGGATATCAAGGAGAACCTTCAAGACCAGATCCGGCATTGGTTCATCGAATGCAGAAATTTAACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS GCA 90 bp ATCCAGAAAAGACACAGAGAACAAGGGTTACCACAGAGAAATCAGTaGCAGTTTCCCTCTCGGTTGAAAGTTGCATCTCATCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: IQKRHREQGLPQRNQ*QFPSRLKVASHQER
Trigger: CCTTTCTTGATGAGATGCAACTTTCAACCGAGAGGGAAACTGGCACTGATTTCTCTGTGGTAACCCTTGTTCTCTGTGTCTTTTCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAGCATCTTGGATTGCTTaGCTCTATATTCTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAASWIA*LYILAD
Trigger: ATCTGCAAGAATATAGAGCAAAGCAATCCAAGATGC...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATACATCCTTCCTTCATaGCAGGAAGAAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAYILPS*QEEKDL
Trigger: CAAGTCTTTTTCTTCCTGCAATGAAGGAAGGATGTA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATGTGAGGACTCCTCCATaGCGTTCAATGATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: EESNLERLWRVSRVNFSYVRTPP*RSMICF
Trigger: GAAGCAAATCATTGAACGCAATGGAGGAGTCCTCAC...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATATTCGACTATATGTCCTaGGGTGAAGCCGTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIFDYMS*GEAVSD
Trigger: GTCACTGACGGCTTCACCCAAGGACATATAGTCGAA...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATGAGAGGTTTATGAATTaGCCGCCGGATTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: EESNLERLWRVSRVNFSYERFMN*PPDSLI
Trigger: GATCAGAGAATCCGGCGGCAAATTCATAAACCTCTC...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGAGGAAGAGTCCAACTaGGAAAGACTGTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQEEESN*ERLWRV
Trigger: CACCCTCCACAGTCTTTCCAAGTTGGACTCTTCCTC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS TCA 90 bp AACAAGGGTTACCACAGAGAAATCAGTGCCAGTTTCCCTCTCGGTTaGAAGTTGCATCTCATCAAGAAAGGAATACACAGAAGTCTACTC +
Preference number: 5 (lower is better)
Translates to: NKGYHREISASFPLG*KLHLIKKGIHRSLL
Trigger: GAGTAGACTTCTGTGTATTCCTTTCTTGATGAGATGCAACTTTCAACCGAGAGGGAAACTGGCACTGATTTCTCTGTGGTAACCCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS GCA 90 bp TTCCACACGCTGTCAGCCAGGCAAGTCATCCTTTGTGGTATCTCTTaGATCCTTCGAGATGTCTCTTGCGTCTATTTCATCTTTTTATAT +
Preference number: 5 (lower is better)
Translates to: FHTLSARQVILCGIS*ILRDVSCVYFIFLY
Trigger: ATATAAAAAGATGAAATAGACGCAAGAGACATCTCGAAGGATGCAAGAGATACCACAAAGGATGACTTGCCTGGCTGACAGCGTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467572.5
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAGAAAACCTGATTTCTTaGTGGTTCAATCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAENLIS*WFNHLL
Trigger: CAGAAGATGATTGAACCACAAAGAAATCAGGTTTTC...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCAATCCTCAATAACCTGTaGTATGGTCTTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAILNNL*YGLVRK
Trigger: TTTTCTGACAAGACCATACAACAGGTTATTGAGGAT...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp AAAGTTATGATGAACACCCAGCTAGGTGTCCAGCCTGGGAAAGGCATAACAGCATTTTTCTTCTTCCTCTaGGTTTGCTATGATATCCTC +
Preference number: 5 (lower is better)
Translates to: KVMMNTQLGVQPGKGITAFFFFL*VCYDIL
Trigger: GAGGATATCATAGCAAACCAAGAGGAAGAAGAAAAA...TGCTGTTATGCCTTTCCCAGGCTGGACACCTAGCTGGGTGTTCATCATAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS TCA 90 bp ATGTCCCGGTTAAATTTAGCCATGGTCCTCAGAAGATATCTATTGTaGACCTTCAGGTGGTTTCCTTTGATGTCCTTAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: MSRLNLAMVLRRYLL*TFRWFPLMSLEVLR
Trigger: TCTGAGGACTTCTAAGGACATCAAAGGAAACCACCTGAAGGTTCACAATAGATATCTTCTGAGGACCATGGCTAAATTTAACCGGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465621.1
CDS GCA 90 bp CAGAGACTCGATGGTCCTGTCAGCTGTCAGATCTTTATCCTTCTTTaGCTTCTTCTCTTTCTTTTTGCCTTTCTTTCCTTTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: QRLDGPVSCQIFILL*LLLFLFAFLSFLLV
Trigger: GACAAGAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGACAGGACCATCGAGTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000418802.2
ENST00000431676.6
CDS GCA 90 bp CAGAGACTCGATGGTCCTGTCAGCTGTCAGATCTTTATCCTTCTTTaGCTTCTTCTCTTTCTTTTTGCCTTTCTTTCCTTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: QRLDGPVSCQIFILL*LLLFLFAFLSFLVL
Trigger: AAGGACAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGACAGGACCATCGAGTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309507.9
ENST00000409907.8
CDS GCA 90 bp GTTACCACAGAGAAATCAGTGCCAGTTTCCCTCTCGGTTGAAAGTTaGATCTCATCAAGAAAGGAATACACAGAAGTCTACTCTAGCTTA +
Preference number: 5 (lower is better)
Translates to: VTTEKSVPVSLSVES*ISSRKEYTEVYSSL
Trigger: TAAGCTAGAGTAGACTTCTGTGTATTCCTTTCTTGATGAGATGCAACTTTCAACCGAGAGGGAAACTGGCACTGATTTCTCTGTGGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAACATTGCGTTCGACATaGCTGGCTACTTTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQTLRST*LATFPL
Trigger: AAGAGGGAAAGTAGCCAGCAATGTCGAACGCAATGT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp GAAGAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATGCCAAGCATCTTGGATaGCTTTGCTCTATATTCTTG +
Preference number: 5 (lower is better)
Translates to: EESNLERLWRVSRVNFSYAKHLG*LCSIFL
Trigger: CAAGAATATAGAGCAAAGCAATCCAAGATGCTTGGC...ATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAATGCCGGATCTGGTCTaGAAGGTTCTCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQMPDLV*KVLLDI
Trigger: GATATCAAGGAGAACCTTCAAGACCAGATCCGGCAT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAAACTTTGCAGAAAGATaGGAGTTCAGCATCGAAGGG +
Preference number: 5 (lower is better)
Translates to: ESNLERLWRVSRVNFSYINFAER*EFSIEG
Trigger: CCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGTT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGAGAGGTTTATGAATTaGCCGCCGGATTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQERFMN*PPDSLI
Trigger: GATCAGAGAATCCGGCGGCAAATTCATAAACCTCTC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACTCTCTTCTTCCTCTTaGTACACTGGATTCATGCTG +
Preference number: 5 (lower is better)
Translates to: ESNLERLWRVSRVNFSYILSSSS*YTGFML
Trigger: CAGCATGAATCCAGTGTACAAAGAGGAAGAAGAGAG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAAACTTTGCAGAAAGATaGGAGTTCAGCATCGAAGGG +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQNFAER*EFSIEG
Trigger: CCCTTCGATGCTGAACTCCAATCTTTCTGCAAAGTT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAACTCTCTTCTTCCTCTTaGTACACTGGATTCATGCTG +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQLSSSS*YTGFML
Trigger: CAGCATGAATCCAGTGTACAAAGAGGAAGAAGAGAG...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS GCA 90 bp TTACCTCTATTCTGTAAAGGGAGCACAAGGGAAGTAAAGGAGACTTaGTGTAACTTATTTAATTATATCGAGACGGTGGAGAAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: LPLFCKGSTREVKET*CNLFNYIETVEKGE
Trigger: TTCACCCTTCTCCACCGTCTCGATATAATTAAATAAGTTACAGCAAGTCTCCTTTACTTCCCTTGTGCTCCCTTTACAGAATAGAGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAGCCAAGCATCTTGGATaGCTTTGCTCTATATTCTTG +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQAKHLG*LCSIFL
Trigger: CAAGAATATAGAGCAAAGCAATCCAAGATGCTTGGC...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATAATTGCGTTCAATGATTaGCTTCCACAGAACGTATCT +
Preference number: 5 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIIAFND*LPQNVS
Trigger: AGATACGTTCTGTGGAAGCAAATCATTGAACGCAAT...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS-3UTR CAA 90 bp GAGTCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAGTTATATACAAACTaGGCGTGGATTAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: ESNLERLWRVSRVNFSYIQLYTN*AWIKAV
Trigger: CACAGCTTTAATCCACGCCAAGTTTGTATATAACTG...TATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS GCA 90 bp CAGCTGTCAGATCTTTATCCTTCTTTGCCTTCTTCTCTTTCTTTTTaGCTTTCTTTCCTTTCTTGTCCTTTTTCTTTCCTGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: QLSDLYPSLPSSLSF*LSFLSCPFSFLLSL
Trigger: CAGTGAAAGCAGGAAAGAAAAAGGACAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309507.9
ENST00000409907.8
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAATTCTTGCCAAGCATCTaGGATTGCTTTGCTCTATAT +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQFLPSI*DCFALY
Trigger: ATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGAA...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS TCA 90 bp AGATCTGCACATACTTTACGTAGAAGGTGGCTAATGTTTGAAAGATaGAAACCTGATTTCTTTGTGGTTCAATCATCTTCTGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RSAHTLRRRWLMFER*KPDFFVVQSSSEAL
Trigger: AAGAGCCTCAGAAGATGATTGAACCACAAAGAAATCAGGTTTTCATCTTTCAAACATTAGCCACCTTCTACGTAAAGTATGTGCAGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS GCA 90 bp CAGCTGTCAGATCTTTATCCTTCTTTGCCTTCTTCTCTTTCTTTTTaGCTTTCTTTCCTTTCTTCTTGTCCTTTTTCTTTCCTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: QLSDLYPSLPSSLSF*LSFLSSCPFSFLLS
Trigger: TGAAAGCAGGAAAGAAAAAGGACAAGAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000418802.2
ENST00000431676.6
CDS-3UTR CAA 90 bp TCCAACTTGGAAAGACTGTGGAGGGTGTCAAGAGTGAATTTCAGTTATATACAAATCCTCAATAACCTGTaGTATGGTCTTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SNLERLWRVSRVNFSYIQILNNL*YGLVRK
Trigger: TTTTCTGACAAGACCATACAACAGGTTATTGAGGAT...TTGTATATAACTGAAATTCACTCTTGACACCCTCCACAGTCTTTCCAAGTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000409907.8
ENST00000431676.6
CDS GCA 72 bp TCCCTCTTTTCCTCGCCCTCCGGGAAGCTCTTCCGTTaGTCTCTGAAGGACGGTGGCAGCAGGGGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: SLFSSPSGKLFR*SLKDGGSRGQG
Trigger: GCCCTGACCCCTGCTGCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCGGAGGGCGAGGAAAAGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS CAA 72 bp ATCTTCTGCTTCGGGCAGGAAAAGGTGAGGCCGGGTTaGCTTCGCAGGCACGGAGCGCGCAGGCGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: IFCFGQEKVRPG*LRRHGARRRRE
Trigger: CTCTCTGCGCCTGCGCGCTCCGTGCCTGCGAAGCAAACCCGGCCTCACCTTTTCCTGCCCGAAGCAGAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254653.9
ENST00000309507.9
CDS TCA 72 bp GGACTGCGAGAATCTTCTGCTTCGGGCAGGAAAAGGTaGGGCCGGGTTTGCTTCGCAGGCACGGAGCGCGCA +
Preference number: 6 (lower is better)
Translates to: GLRESSASGRKR*GRVCFAGTERA
Trigger: TGCGCGCTCCGTGCCTGCGAAGCAAACCCGGCCTCACCTTTTCCTGCCCGAAGCAGAAGATTCTCGCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254653.9
ENST00000309507.9
CDS TCA 72 bp TTTCCTCGCCCTCCGGGAAGCTCTTCCGTTGCTCTCTaGAGGACGGTGGCAGCAGGGGTCAGGGCACTACCA +
Preference number: 6 (lower is better)
Translates to: FPRPPGSSSVAL*RTVAAGVRALP
Trigger: TGGTAGTGCCCTGACCCCTGCTGCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCGGAGGGCGAGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS CAA 72 bp TTCCCTCTTTTCCTCGCCCTCCGGGAAGCTCTTCCGTaGCTCTCTGAAGGACGGTGGCAGCAGGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: FPLFLALREALP*LSEGRWQQGSG
Trigger: CCCTGACCCCTGCTGCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCGGAGGGCGAGGAAAAGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS CAA 90 bp ACTGCGAGAATCTTCTGCTTCGGGCAGGAAAAGGTGAGGCCGGGTTaGCTTCGCAGGCACGGAGCGCGCAGGCGCAGAGAGGTGTTTCAC +
Preference number: 6 (lower is better)
Translates to: TARIFCFGQEKVRPG*LRRHGARRRREVFH
Trigger: GTGAAACACCTCTCTGCGCCTGCGCGCTCCGTGCCTGCGAAGCAAACCCGGCCTCACCTTTTCCTGCCCGAAGCAGAAGATTCTCGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254653.9
ENST00000309507.9
CDS CAA 90 bp CTGGCTACTTTCCCTCTTTTCCTCGCCCTCCGGGAAGCTCTTCCGTaGCTCTCTGAAGGACGGTGGCAGCAGGGGTCAGGGCACTACCAG +
Preference number: 6 (lower is better)
Translates to: LATFPLFLALREALP*LSEGRWQQGSGHYQ
Trigger: CTGGTAGTGCCCTGACCCCTGCTGCCACCGTCCTTCAGAGAGCAACGGAAGAGCTTCCCGGAGGGCGAGGAAAAGAGGGAAAGTAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS CCA 72 bp GGTCAGGGCACTACCAGGAGCTACAGAGGATTTGGGTaGGGGGTCTTCTGGAGGGAGAAACCAGGACTGCGA +
Preference number: 6 (lower is better)
Translates to: GQGTTRSYRGFG*GVFWREKPGLR
Trigger: TCGCAGTCCTGGTTTCTCCCTCCAGAAGACCCCCCACCCAAATCCTCTGTAGCTCCTGGTAGTGCCCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS CCA 72 bp GAGCTATTGCAGCAGTTCACTCCCACTGTCCTCTTTTaGGGGGTCCTTGGCCCTGTGGGTGAGCTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: ELLQQFTPTVLF*GVLGPVGELSC
Trigger: GCAGCTCAGCTCACCCACAGGGCCAAGGACCCCCCAAAAGAGGACAGTGGGAGTGAACTGCTGCAATAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS TCA 72 bp CCAGGATGCGGCCCATCACCCCGTCCAGGACTTTCCTaGTCAGTATTCGTTTCTGGGGGTGGACGAACTGGT +
Preference number: 6 (lower is better)
Translates to: PGCGPSPRPGLS*SVFVSGGGRTG
Trigger: ACCAGTTCGTCCACCCCCAGAAACGAATACTGATCAGGAAAGTCCTGGACGGGGTGATGGGCCGCATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS TCA 72 bp GAGGGCTGGAGCTGTCGAGCCACCAAGAATGTCAGGTaGCCATCCCATGATGGGCAGGTGGTTGTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: EGWSCRATKNVR*PSHDGQVVVFC
Trigger: ACAGAAAACAACCACCTGCCCATCATGGGATGGTCACCTGACATTCTTGGTGGCTCGACAGCTCCAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409100.1
CDS GCA 72 bp CTTCTGGAGGGAGAAACCAGGACTGCGAGAATCTTCTaGTTCGGGCAGGAAAAGGTGAGGCCGGGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: LLEGETRTARIF*FGQEKVRPGLL
Trigger: AAGCAAACCCGGCCTCACCTTTTCCTGCCCGAAGCAGAAGATTCTCGCAGTCCTGGTTTCTCCCTCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS GCA 72 bp AGCTGTGGATGCATAGGCATCCAGGGTTTGGAGATCTaGAGTGAAACCAAGGAGGGCCACAGGGACCCCAAA +
Preference number: 6 (lower is better)
Translates to: SCGCIGIQGLEI*SETKEGHRDPK
Trigger: TTTGGGGTCCCTGTGGCCCTCCTTGGTTTCACTGCAGATCTCCAAACCCTGGATGCCTATGCATCCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CAA 72 bp CCAAGCTGGAGAATCTGGCTTTTGGGCCACGAGCTATaGCAGCAGTTCACTCCCACTGTCCTCTTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: PSWRIWLLGHEL*QQFTPTVLFWG
Trigger: CCCCCAAAAGAGGACAGTGGGAGTGAACTGCTGCAATAGCTCGTGGCCCAAAAGCCAGATTCTCCAGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CCA 72 bp GTAAAGCGCTTGGAAGTGCAGCAGCCCGGCACTTGGTaGGGACTTGACTTTCTGTGGCTGTGTTACTGTTGT +
Preference number: 6 (lower is better)
Translates to: VKRLEVQQPGTW*GLDFLWLCYCC
Trigger: ACAACAGTAACACAGCCACAGAAAGTCAAGTCCCCACCAAGTGCCGGGCTGCTGCACTTCCAAGCGCTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CAA 72 bp TTCCCAGCAATGTTAGAGGAGGACAAGTTGAAGAGGTaGGCTCCCGTTTCGGTGCAGATGGCATGGACCAGC +
Preference number: 6 (lower is better)
Translates to: FPAMLEEDKLKR*APVSVQMAWTS
Trigger: GCTGGTCCATGCCATCTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTCCTCCTCTAACATTGCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CCA 72 bp TTTGTAAAGCGCTTGGAAGTGCAGCAGCCCGGCACTTaGTGGGGACTTGACTTTCTGTGGCTGTGTTACTGT +
Preference number: 6 (lower is better)
Translates to: FVKRLEVQQPGT*WGLDFLWLCYC
Trigger: ACAGTAACACAGCCACAGAAAGTCAAGTCCCCACCAAGTGCCGGGCTGCTGCACTTCCAAGCGCTTTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CAA 72 bp CCAGGGTATTTCCCAGCAATGTTAGAGGAGGACAAGTaGAAGAGGTTGGCTCCCGTTTCGGTGCAGATGGCA +
Preference number: 6 (lower is better)
Translates to: PGYFPAMLEEDK*KRLAPVSVQMA
Trigger: TGCCATCTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTCCTCCTCTAACATTGCTGGGAAATACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CAA 90 bp CCATTTTTGCCAGGGTATTTCCCAGCAATGTTAGAGGAGGACAAGTaGAAGAGGTTGGCTCCCGTTTCGGTGCAGATGGCATGGACCAGC +
Preference number: 6 (lower is better)
Translates to: PFLPGYFPAMLEEDK*KRLAPVSVQMAWTS
Trigger: GCTGGTCCATGCCATCTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTCCTCCTCTAACATTGCTGGGAAATACCCTGGCAAAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CAA 90 bp GGGCTGGAGCTGTCGAGCCACCTTGAAGACTGCATGCAGCATCATTaGGAGGCCATTTTTGCCAGGGTATTTCCCAGCAATGTTAGAGGA +
Preference number: 6 (lower is better)
Translates to: GLELSSHLEDCMQHH*EAIFARVFPSNVRG
Trigger: TCCTCTAACATTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCTCGACAGCTCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CAA 90 bp CCAGGGTATTTCCCAGCAATGTTAGAGGAGGACAAGTTGAAGAGGTaGGCTCCCGTTTCGGTGCAGATGGCATGGACCAGCATTTTCTTC +
Preference number: 6 (lower is better)
Translates to: PGYFPAMLEEDKLKR*APVSVQMAWTSIFF
Trigger: GAAGAAAATGCTGGTCCATGCCATCTGCACCGAAACGGGAGCCAACCTCTTCAACTTGTCCTCCTCTAACATTGCTGGGAAATACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CAA 72 bp GCTTGGAAGTGCAGCAGCCCGGCACTTGGTGGGGACTaGACTTTCTGTGGCTGTGTTACTGTTGTTATTACA +
Preference number: 6 (lower is better)
Translates to: AWKCSSPALGGD*TFCGCVTVVIT
Trigger: TGTAATAACAACAGTAACACAGCCACAGAAAGTCAAGTCCCCACCAAGTGCCGGGCTGCTGCACTTCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS TCA 72 bp CTTGGAAGTGCAGCAGCCCGGCACTTGGTGGGGACTTaGCTTTCTGTGGCTGTGTTACTGTTGTTATTACAA +
Preference number: 6 (lower is better)
Translates to: LGSAAARHLVGT*LSVAVLLLLLQ
Trigger: TTGTAATAACAACAGTAACACAGCCACAGAAAGTCAAGTCCCCACCAAGTGCCGGGCTGCTGCACTTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CCA 72 bp TGCACCTCATTCCGCAGGCGGTCCACCTTTTCAGCCTaGATTACTGTAGCACTGACTTCATTAAAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: CTSFRRRSTFSA*ITVALTSLKRG
Trigger: TCCTCTCTTTAATGAAGTCAGTGCTACAGTAATCCAGGCTGAAAAGGTGGACCGCCTGCGGAATGAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS CCA 72 bp TGTCGAGCCACCTTGAAGACTGCATGCAGCATCATTTaGAGGCCATTTTTGCCAGGGTATTTCCCAGCAATG +
Preference number: 6 (lower is better)
Translates to: CRATLKTACSII*RPFLPGYFPAM
Trigger: CATTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCTCGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CCA 72 bp TTCCACTCAAGATACCTGGAGTTCACTTCAATTCCTTaGTCTCCTGTTTCTTCCACACGCTGTCAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: FHSRYLEFTSIP*SPVSSTRCQPG
Trigger: GCCTGGCTGACAGCGTGTGGAAGAAACAGGAGACCAAGGAATTGAAGTGAACTCCAGGTATCTTGAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467572.5
CDS CAA 72 bp CTGTCGAGCCACCTTGAAGACTGCATGCAGCATCATTaGGAGGCCATTTTTGCCAGGGTATTTCCCAGCAAT +
Preference number: 6 (lower is better)
Translates to: LSSHLEDCMQHH*EAIFARVFPSN
Trigger: ATTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCTCGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CAA 90 bp CGAGCCACCTTGAAGACTGCATGCAGCATCATTTGGAGGCCATTTTaGCCAGGGTATTTCCCAGCAATGTTAGAGGAGGACAAGTTGAAG +
Preference number: 6 (lower is better)
Translates to: RATLKTACSIIWRPF*PGYFPAMLEEDKLK
Trigger: CTTCAACTTGTCCTCCTCTAACATTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCAGTCTTCAAGGTGGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CAA 90 bp GGTCTCCTGTTTCTTCCACACGCTGTCAGCCAGGCAAGTCATCCTTaGTGGTATCTCTTGCATCCTTCGAGATGTCTCTTGCGTCTATTT +
Preference number: 6 (lower is better)
Translates to: GLLFLPHAVSQASHP*WYLLHPSRCLLRLF
Trigger: AAATAGACGCAAGAGACATCTCGAAGGATGCAAGAGATACCACAAAGGATGACTTGCCTGGCTGACAGCGTGTGGAAGAAACAGGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467572.5
CDS GCA 72 bp GCTAACAGTAGCGATTTCACCAAAGGAGCTTTCTCATaGACTGCTGCAGAACCTAATGGCCAGATTCCGTAC +
Preference number: 6 (lower is better)
Translates to: ANSSDFTKGAFS*TAAEPNGQIPY
Trigger: GTACGGAATCTGGCCATTAGGTTCTGCAGCAGTGCATGAGAAAGCTCCTTTGGTGAAATCGCTACTGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CCA 72 bp AATGTAACTATGAACCAAGCTGGAGAATCTGGCTTTTaGGCCACGAGCTATTGCAGCAGTTCACTCCCACTG +
Preference number: 6 (lower is better)
Translates to: NVTMNQAGESGF*ATSYCSSSLPL
Trigger: CAGTGGGAGTGAACTGCTGCAATAGCTCGTGGCCCAAAAGCCAGATTCTCCAGCTTGGTTCATAGTTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CAA 72 bp TTTCTTCCACACGCTGTCAGCCAGGCAAGTCATCCTTaGTGGTATCTCTTGCATCCTTCGAGATGTCTCTTG +
Preference number: 6 (lower is better)
Translates to: FLPHAVSQASHP*WYLLHPSRCLL
Trigger: CAAGAGACATCTCGAAGGATGCAAGAGATACCACAAAGGATGACTTGCCTGGCTGACAGCGTGTGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467572.5
CDS CAA 90 bp TTCGCCAGGCAGCTGACATTCAAGGCACTGGTGAGGACTCCTCCATaGCGTTCAATGATTTGCTTCCACAGAACTGTTGTATCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: FARQLTFKALVRTPP*RSMICFHRTVVSRK
Trigger: TTTTCTGGATACAACAGTTCTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCCTTGAATGTCAGCTGCCTGGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS GCA 72 bp GGAATCAGAATGCAGATTCCAGTTTTCATCAGCTACTaGCAGGGTCAGTTCCCTTTCAGTGGAAGACACTGT +
Preference number: 6 (lower is better)
Translates to: GIRMQIPVFISY*QGQFPFSGRHC
Trigger: ACAGTGTCTTCCACTGAAAGGGAACTGACCCTGGCAGTAGCTGATGAAAACTGGAATCTGCATTCTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CCA 72 bp CTTATTCTTTCCCCCTCAGCAACTGTAAACACGCATTaGTTGACTAGAGTCCTTCAGATGAGTCCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: LILSPSATVNTH*LTRVLQMSPGC
Trigger: ACACCCAGGACTCATCTGAAGGACTCTAGTCAACCAATGCGTGTTTACAGTTGCTGAGGGGGAAAGAATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CAA 72 bp TTGAAGACTGCATGCAGCATCATTTGGAGGCCATTTTaGCCAGGGTATTTCCCAGCAATGTTAGAGGAGGAC +
Preference number: 6 (lower is better)
Translates to: LKTACSIIWRPF*PGYFPAMLEED
Trigger: GTCCTCCTCTAACATTGCTGGGAAATACCCTGGCAAAAATGGCCTCCAAATGATGCTGCATGCAGTCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000431676.6
CDS CAA 72 bp GGCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTaGCTTCCACAGAACTGTTGTATCCAGAAAAGACAC +
Preference number: 6 (lower is better)
Translates to: GTGEDSSIAFND*LPQNCCIQKRH
Trigger: GTGTCTTTTCTGGATACAACAGTTCTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS TCA 72 bp GCTTTGCTCTATATTCTTGCAGATAGATTTGCTTCATaGATAAAGCCCTTAGGCGACCTTGCCGTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: ALLYILADRFAS*IKPLGDLAVPS
Trigger: AGAGGGCACGGCAAGGTCGCCTAAGGGCTTTATTCATGAAGCAAATCTATCTGCAAGAATATAGAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS TCA 72 bp TTTCTGCATTCGATGAACCAATGCCGGATCTGGTCTTaGAGGTTCTCCTTGATATCCACGCCTTCTATCAAC +
Preference number: 6 (lower is better)
Translates to: FLHSMNQCRIWS*RFSLISTPSIN
Trigger: GTTGATAGAAGGCGTGGATATCAAGGAGAACCTTCAAGACCAGATCCGGCATTGGTTCATCGAATGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS TCA 72 bp CTGTCGAGCCACCAAGAATGTCAGGTGACCATCCCATaGTGGGCAGGTGGTTGTTTTCTGTATTTCTATAAT +
Preference number: 6 (lower is better)
Translates to: LSSHQECQVTIP*WAGGCFLYFYN
Trigger: ATTATAGAAATACAGAAAACAACCACCTGCCCATCATGGGATGGTCACCTGACATTCTTGGTGGCTCGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409100.1
CDS GCA 72 bp GCACTGGTGAGGACTCCTCCATTGCGTTCAATGATTTaGTTCCACAGAACTGTTGTATCCAGAAAAGACACA +
Preference number: 6 (lower is better)
Translates to: ALVRTPPLRSMI*FHRTVVSRKDT
Trigger: TGTGTCTTTTCTGGATACAACAGTTCTGTGGAAGCAAATCATTGAACGCAATGGAGGAGTCCTCACCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS CAA 72 bp ATTTCTGCATTCGATGAACCAATGCCGGATCTGGTCTaGAAGGTTCTCCTTGATATCCACGCCTTCTATCAA +
Preference number: 6 (lower is better)
Translates to: ISAFDEPMPDLV*KVLLDIHAFYQ
Trigger: TTGATAGAAGGCGTGGATATCAAGGAGAACCTTCAAGACCAGATCCGGCATTGGTTCATCGAATGCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS CAA 72 bp GCCTTCTTCTCTTTCTTTTTGCCTTTCTTTCCTTTCTaGTCCTTTTTCTTTCCTGCTTTCACTGGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: AFFSFFLPFFPF*SFFFPAFTGRS
Trigger: GGAGCGCCCAGTGAAAGCAGGAAAGAAAAAGGACAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309507.9
ENST00000409907.8
CDS CAA 72 bp ACACAAAATAGGCTACAAGAGTGTTTCAAAGCCTGTTaGTGTAGCGATGGATGGCAGCCGGTGAAGATTATC +
Preference number: 6 (lower is better)
Translates to: TQNRLQECFKAC*CSDGWQPVKII
Trigger: GATAATCTTCACCGGCTGCCATCCATCGCTACACAAACAGGCTTTGAAACACTCTTGTAGCCTATTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CAA 90 bp GAACAAGGGTTACCACAGAGAAATCAGTGCCAGTTTCCCTCTCGGTaGAAAGTTGCATCTCATCAAGAAAGGAATACACAGAAGTCTACT +
Preference number: 6 (lower is better)
Translates to: EQGLPQRNQCQFPSR*KVASHQERNTQKST
Trigger: AGTAGACTTCTGTGTATTCCTTTCTTGATGAGATGCAACTTTCAACCGAGAGGGAAACTGGCACTGATTTCTCTGTGGTAACCCTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS TCA 72 bp TCTTTATCGAGTAAAGCACCGAGGGCTTCTTGGGTCTaGTGCCACATCTTATTATACATTGCGTTCGACATT +
Preference number: 6 (lower is better)
Translates to: SLSSKAPRASWV*CHILLYIAFDI
Trigger: AATGTCGAACGCAATGTATAATAAGATGTGGCATCAGACCCAAGAAGCCCTCGGTGCTTTACTCGATAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
CDS TCA 72 bp TACCACAGAGAAATCAGTGCCAGTTTCCCTCTCGGTTaGAAGTTGCATCTCATCAAGAAAGGAATACACAGA +
Preference number: 6 (lower is better)
Translates to: YHREISASFPLG*KLHLIKKGIHR
Trigger: TCTGTGTATTCCTTTCTTGATGAGATGCAACTTTCAACCGAGAGGGAAACTGGCACTGATTTCTCTGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS GCA 72 bp GAGAAATCAGTGCCAGTTTCCCTCTCGGTTGAAAGTTaGATCTCATCAAGAAAGGAATACACAGAAGTCTAC +
Preference number: 6 (lower is better)
Translates to: EKSVPVSLSVES*ISSRKEYTEVY
Trigger: GTAGACTTCTGTGTATTCCTTTCTTGATGAGATGCAACTTTCAACCGAGAGGGAAACTGGCACTGATTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS CAA 72 bp TTACCACAGAGAAATCAGTGCCAGTTTCCCTCTCGGTaGAAAGTTGCATCTCATCAAGAAAGGAATACACAG +
Preference number: 6 (lower is better)
Translates to: LPQRNQCQFPSR*KVASHQERNTQ
Trigger: CTGTGTATTCCTTTCTTGATGAGATGCAACTTTCAACCGAGAGGGAAACTGGCACTGATTTCTCTGTGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479471.1
ENST00000479783.1
CDS CAA 90 bp ACAGAGACTCGATGGTCCTGTCAGCTGTCAGATCTTTATCCTTCTTaGCCTTCTTCTCTTTCTTTTTGCCTTTCTTTCCTTTCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: TETRWSCQLSDLYPS*PSSLSFCLSFLSCP
Trigger: AGGACAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGACAGGACCATCGAGTCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309507.9
ENST00000409907.8
CDS CAA 90 bp GCAAGTCATCCTTTGTGGTATCTCTTGCATCCTTCGAGATGTCTCTaGCGTCTATTTCATCTTTTTATATCCAGTACTTTCACCCAAGGG +
Preference number: 6 (lower is better)
Translates to: ASHPLWYLLHPSRCL*RLFHLFISSTFTQG
Trigger: CCCTTGGGTGAAAGTACTGGATATAAAAAGATGAAATAGACGCAAGAGACATCTCGAAGGATGCAAGAGATACCACAAAGGATGACTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467572.5
CDS TCA 72 bp AACAGGCATAGAAGGATTGACTTCTCAGTGCTGCTGTaGAAAACAAGCCCAAAAATGTTTGTAAAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: NRHRRIDFSVLL*KTSPKMFVKRL
Trigger: CAAGCGCTTTACAAACATTTTTGGGCTTGTTTTTCACAGCAGCACTGAGAAGTCAATCCTTCTATGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CCA 72 bp CAGCCCAGGTATCTGTCACTTTCTTGCCAAGCATCTTaGATTGCTTTGCTCTATATTCTTGCAGATAGATTT +
Preference number: 6 (lower is better)
Translates to: QPRYLSLSCQAS*IALLYILADRF
Trigger: AAATCTATCTGCAAGAATATAGAGCAAAGCAATCCAAGATGCTTGGCAAGAAAGTGACAGATACCTGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS CAA 72 bp TTCTTCTCTTTCTTTTTGCCTTTCTTTCCTTTCTTCTaGTCCTTTTTCTTTCCTGCTTTCACTGGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: FFSFFLPFFPFF*SFFFPAFTGRS
Trigger: GGAGCGCCCAGTGAAAGCAGGAAAGAAAAAGGACAAGAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000418802.2
ENST00000431676.6
CDS CAA 72 bp CGATGGTCCTGTCAGCTGTCAGATCTTTATCCTTCTTaGCCTTCTTCTCTTTCTTTTTGCCTTTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: RWSCQLSDLYPS*PSSLSFCLSFL
Trigger: AAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGACAGGACCATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS CAA 72 bp CAAACTAGTCTTATCCGTAAAACAGGCATAGAAGGATaGACTTCTCAGTGCTGCTGTGAAAAACAAGCCCAA +
Preference number: 6 (lower is better)
Translates to: QTSLIRKTGIEG*TSQCCCEKQAQ
Trigger: TTGGGCTTGTTTTTCACAGCAGCACTGAGAAGTCAATCCTTCTATGCCTGTTTTACGGATAAGACTAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479783.1
CDS CAA 90 bp ACAGAGACTCGATGGTCCTGTCAGCTGTCAGATCTTTATCCTTCTTaGCCTTCTTCTCTTTCTTTTTGCCTTTCTTTCCTTTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: TETRWSCQLSDLYPS*PSSLSFCLSFLSSC
Trigger: ACAAGAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGACAGGACCATCGAGTCTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000418802.2
ENST00000431676.6
CDS GCA 72 bp GATGGTCCTGTCAGCTGTCAGATCTTTATCCTTCTTTaGCTTCTTCTCTTTCTTTTTGCCTTTCTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: DGPVSCQIFILL*LLLFLFAFLSF
Trigger: AAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGACAGGACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS CAA 90 bp TCAGCTGTCAGATCTTTATCCTTCTTTGCCTTCTTCTCTTTCTTTTaGCCTTTCTTTCCTTTCTTCTTGTCCTTTTTCTTTCCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: SAVRSLSFFAFFSFF*PFFPFFLSFFFPAF
Trigger: GAAAGCAGGAAAGAAAAAGGACAAGAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254653.9
ENST00000418802.2
ENST00000431676.6
CDS CAA 90 bp TCAGCTGTCAGATCTTTATCCTTCTTTGCCTTCTTCTCTTTCTTTTaGCCTTTCTTTCCTTTCTTGTCCTTTTTCTTTCCTGCTTTCACT +
Preference number: 6 (lower is better)
Translates to: SAVRSLSFFAFFSFF*PFFPFLSFFFPAFT
Trigger: AGTGAAAGCAGGAAAGAAAAAGGACAAGAAAGGAAAGAAAGGCAAAAAGAAAGAGAAGAAGGCAAAGAAGGATAAAGATCTGACAGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309507.9
ENST00000409907.8
CDS TCA 72 bp TTAAATTTAGCCATGGTCCTCAGAAGATATCTATTGTaGACCTTCAGGTGGTTTCCTTTGATGTCCTTAGAA +
Preference number: 6 (lower is better)
Translates to: LNLAMVLRRYLL*TFRWFPLMSLE
Trigger: TTCTAAGGACATCAAAGGAAACCACCTGAAGGTTCACAATAGATATCTTCTGAGGACCATGGCTAAATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465621.1
CDS CAA 72 bp TCCAGATTTCTTTGTATGCGTTACATCCTTCCTTCATaGCAGGAAGAAAAAGACTTGGTGACATTTTCCATT +
Preference number: 6 (lower is better)
Translates to: SRFLCMRYILPS*QEEKDLVTFSI
Trigger: AATGGAAAATGTCACCAAGTCTTTTTCTTCCTGCAATGAAGGAAGGATGTAACGCATACAAAGAAATCTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
ENST00000465621.1
ENST00000467572.5
CDS TCA 72 bp CATACTTTACGTAGAAGGTGGCTAATGTTTGAAAGATaGAAACCTGATTTCTTTGTGGTTCAATCATCTTCT +
Preference number: 6 (lower is better)
Translates to: HTLRRRWLMFER*KPDFFVVQSSS
Trigger: AGAAGATGATTGAACCACAAAGAAATCAGGTTTTCATCTTTCAAACATTAGCCACCTTCTACGTAAAGTATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254653.9
ENST00000309507.9
ENST00000409907.8
ENST00000418802.2
ENST00000431676.6
CDS CAA 72 bp ATGAACTCCTGTACAATCCTTAAAATCATTCTGTATTaGGAGAATTACCTCTATTCTGTAAAGGGAGCACAA +
Preference number: 6 (lower is better)
Translates to: MNSCTILKIILY*ENYLYSVKGAQ
Trigger: TTGTGCTCCCTTTACAGAATAGAGGTAATTCTCCAAATACAGAATGATTTTAAGGATTGTACAGGAGTTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479783.1