RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQANK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000203499

Ensembl transcript IDs: ENST00000527139.7, ENST00000532625.1, ENST00000533004.5, ENST00000534089.5, ENST00000534398.1

Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGAAGCAGTTCATCTTCACCGGCAGACAGCAGCACTCCTTCCCTaGCTCGTCTTGGGGCTGTGGCTGCTCCTGGGTTTTCTGGTGGGC +
Preference number: 1 (lower is better)
Translates to: SEAVHLHRQTAALLP*LVLGLWLLLGFLVG
Trigger: GCCCACCAGAAAACCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCCGGTGAAGATGAACTGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 90 bp ACTCACAGCTGCCAAACTGAAGAGGAGGCTGGAAGCCCTAGGGCGTaGGGCTCTCCCAATACAAAGCATGCCAACCACTCCCACCAGTTA +
Preference number: 1 (lower is better)
Translates to: THSCQTEEEAGSPRA*GSPNTKHANHSHQL
Trigger: TAACTGGTGGGAGTGGTTGGCATGCTTTGTATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCTGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR TCA 90 bp ATCAACTGGGATGTGGGATTCTGGACAAGGTCAGTAGGGTGTTGCTaGCCCAGTGAGTATGATCAGAGACACGTCAGGCTCTGCCAGCCG +
Preference number: 1 (lower is better)
Translates to: INWDVGFWTRSVGCC*PSEYDQRHVRLCQP
Trigger: CGGCTGGCAGAGCCTGACGTGTCTCTGATCATACTCACTGGGTCAGCAACACCCTACTGACCTTGTCCAGAATCCCACATCCCAGTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR TCA 90 bp CAGCCGGACAGCAGCTGCCACAGTCTCTCACCCAGTTTCCAGATTTaGGTGAAATTCAGACTCACAGCTGCCAAACTGAAGAGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: QPDSSCHSLSPSFQI*VKFRLTAAKLKRRL
Trigger: CAGCCTCCTCTTCAGTTTGGCAGCTGTGAGTCTGAATTTCACTCAAATCTGGAAACTGGGTGAGAGACTGTGGCAGCTGCTGTCCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 90 bp TCTCTCACCCAGTTTCCAGATTTGAGTGAAATTCAGACTCACAGCTaGCAAACTGAAGAGGAGGCTGGAAGCCCTAGGGCGTGCGGCTCT +
Preference number: 1 (lower is better)
Translates to: SLTQFPDLSEIQTHS*QTEEEAGSPRACGS
Trigger: AGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCTGTGAGTCTGAATTTCACTCAAATCTGGAAACTGGGTGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 90 bp TGGGTCTGTAGGTCTGCCCTGTTTATTGGGATACACATTCTTAGCTaGCAGCTGAATGCTCACATTGGCTCCTTGGCCGGAGGAGTAAGG +
Preference number: 1 (lower is better)
Translates to: WVCRSALFIGIHILS*QLNAHIGSLAGGVR
Trigger: CCTTACTCCTCCGGCCAAGGAGCCAATGTGAGCATTCAGCTGGCAGCTAAGAATGTGTATCCCAATAAACAGGGCAGACCTACAGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 90 bp ACCAGTTACGCTCCTACTCTGTCCCCAAAGGAGTCTGTGGCCATTTaGCAGGGTTGTGTCACCAACATAGAGGGGTACAGAGAGGCTTTT +
Preference number: 1 (lower is better)
Translates to: TSYAPTLSPKESVAI*QGCVTNIEGYREAF
Trigger: AAAAGCCTCTCTGTACCCCTCTATGTTGGTGACACAACCCTGGCAAATGGCCACAGACTCCTTTGGGGACAGAGTAGGAGCGTAACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR TCA 90 bp AAAGATGTCCACCTCCTGCCCCCTGGAACTTGTGAATACTTGACGTaGTTCAGCAAAAAGAGAATGGAGACTGCAGATGAACTAAGGTTG +
Preference number: 1 (lower is better)
Translates to: KDVHLLPPGTCEYLT*FSKKRMETADELRL
Trigger: CAACCTTAGTTCATCTGCAGTCTCCATTCTCTTTTTGCTGAATCACGTCAAGTATTCACAAGTTCCAGGGGGCAGGAGGTGGACATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR CCA 90 bp AGCTGCCAAACTGAAGAGGAGGCTGGAAGCCCTAGGGCGTGCGGCTCTCCCAATCTCGTCTTGGGGCTGTaGCTGCTCCTGGGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: SCQTEEEAGSPRACGSPNLVLGL*LLLGFL
Trigger: CAGAAAACCCAGGAGCAGCCACAGCCCCAAGACGAG...ATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 90 bp GTTCATCTTCACCGGCAGACAGCAGCACTCCTTCCCTGCCTCGTCTaGGGGCTGTGGCTGCTCCTGGGTTTTCTGGTGGGCGGAATAATG +
Preference number: 2 (lower is better)
Translates to: VHLHRQTAALLPCLV*GLWLLLGFLVGGIM
Trigger: CATTATTCCGCCCACCAGAAAACCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCCGGTGAAGATGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR TCA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTAGCACTTTGGGAGGCTaGGACGGGCGGATCACAAGG +
Preference number: 2 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGSTLGG*DGRITR
Trigger: CCTTGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCT...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR TCA 90 bp AGCTGCCAAACTGAAGAGGAGGCTGGAAGCCCTAGGGCGTGCGGCTCTCCCAATAATCACGAGGGTCCATaGAAGTGGAAAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: SCQTEEEAGSPRACGSPNNHEGP*KWKRSQ
Trigger: CTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATT...ATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR GCA 90 bp AGCTGCCAAACTGAAGAGGAGGCTGGAAGCCCTAGGGCGTGCGGCTCTCCCAATAAGATGTCCACCTCCTaGCCCCTGGAACTTGTGAAT +
Preference number: 2 (lower is better)
Translates to: SCQTEEEAGSPRACGSPNKMSTS*PLELVN
Trigger: ATTCACAAGTTCCAGGGGGCAGGAGGTGGACATCTT...ATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR GCA 90 bp AAGCATGCCAACCACTCCCACCAGTTACGCTCCTACTCTGTCCCCAAAGGAGTCTCTTGGGGCTGTGGCTaGTCCTGGGTTTTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: KHANHSHQLRSYSVPKGVSWGCG*SWVFWW
Trigger: CCACCAGAAAACCCAGGAGCAGCCACAGCCCCAAGA...GACTCCTTTGGGGACAGAGTAGGAGCGTAACTGGTGGGAGTGGTTGGCATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 90 bp CCAGCCGGACAGCAGCTGCCACAGTCTCTCACCCAGTTTCCAGATTaGAGTGAAATTCAGACTCACAGCTGCCAAACTGAAGAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: PAGQQLPQSLTQFPD*SEIQTHSCQTEEEA
Trigger: AGCCTCCTCTTCAGTTTGGCAGCTGTGAGTCTGAATTTCACTCAAATCTGGAAACTGGGTGAGAGACTGTGGCAGCTGCTGTCCGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR GCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTAGACACGTCAGGCTCTaGCAGCCGGACAGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: TVFCKPGLILGKTARKLIRHVRL*QPDSSC
Trigger: GCAGCTGCTGTCCGGCTGGCAGAGCCTGACGTGTCT...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR CCA 90 bp CAGAGACACGTCAGGCTCTGCCAGCCGGACAGCAGCTGCCACAGTCTCTCACCCTTAGATTCACCTGCCTaGCCTTTGCAAAAACAAATT +
Preference number: 2 (lower is better)
Translates to: QRHVRLCQPDSSCHSLSPLDSPA*PLQKQI
Trigger: AATTTGTTTTTGCAAAGGCCAGGCAGGTGAATCTAA...GGGTGAGAGACTGTGGCAGCTGCTGTCCGGCTGGCAGAGCCTGACGTGTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 90 bp GGCAGGAGCTCTGTGGTGACTGTCTTCTGTAAGCCCGGGTTGATATaGGGGAAAACAGCCAGGAAACTGATTGCCCTGATATCAACTGGG +
Preference number: 2 (lower is better)
Translates to: GRSSVVTVFCKPGLI*GKTARKLIALISTG
Trigger: CCCAGTTGATATCAGGGCAATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGTCACCACAGAGCTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR CCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTGGCTGTGGCTGCTCCTaGGTTTTCTGGTGGGCGGAA +
Preference number: 2 (lower is better)
Translates to: TVFCKPGLILGKTARKLIGCGCS*VFWWAE
Trigger: TTCCGCCCACCAGAAAACCCAGGAGCAGCCACAGCC...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 90 bp ACTCCTGGCAGGAGCTCTGTGGTGACTGTCTTCTGTAAGCCCGGGTaGATATTGGGGAAAACAGCCAGGAAACTGATTGCCCTGATATCA +
Preference number: 2 (lower is better)
Translates to: TPGRSSVVTVFCKPG*ILGKTARKLIALIS
Trigger: TGATATCAGGGCAATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGTCACCACAGAGCTCCTGCCAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR TCA 90 bp AGGCAAATGCCTGCTCTTGCCACTCTATTCAGCATAGTGCTGGGAGTTCTAGACTTCTTAGCTGCCAGCTaGATGCTCACATTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RQMPALATLFSIVLGVLDFLAAS*MLTLAP
Trigger: AGGAGCCAATGTGAGCATTCAGCTGGCAGCTAAGAA...GTCTAGAACTCCCAGCACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR TCA 90 bp TTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTGCCACTCTATTCAGCTCACAGCTGCCAAACTaGAGAGGAGGCTGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: FSLRLGTRQMPALATLFSSQLPN*RGGWKP
Trigger: GGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCTGTGA...GCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR TCA 90 bp TTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTGCCACTCTATTCAGCGGCAAGAGAATCGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: FSLRLGTRQMPALATLFSGKRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCGATTCTCTTGCC...GCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR CCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTCCCCAAAGGAGTCTGTaGCCATTTGCCAGGGTTGTG +
Preference number: 2 (lower is better)
Translates to: TVFCKPGLILGKTARKLIPQRSL*PFARVV
Trigger: CACAACCCTGGCAAATGGCCACAGACTCCTTTGGGG...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR TCA 90 bp AGGCAAATGCCTGCTCTTGCCACTCTATTCAGCATAGTGCTGGGAGTTCTAGACAAGGAGTGCTTTGCTTaGGGAATTGCAGAGGTTAAC +
Preference number: 2 (lower is better)
Translates to: RQMPALATLFSIVLGVLDKECFA*GIAEVN
Trigger: GTTAACCTCTGCAATTCCTCAAGCAAAGCACTCCTT...GTCTAGAACTCCCAGCACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR TCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTGCAGAAAGAACCAAGTaGGAGCCTGTGGAACTTCCT +
Preference number: 2 (lower is better)
Translates to: TVFCKPGLILGKTARKLIAERTK*EPVELP
Trigger: AGGAAGTTCCACAGGCTCTCACTTGGTTCTTTCTGC...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR GCA 90 bp GGTAAAAGGCTGAAGGATTTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTATAGAAGGAGTGCTTTaGTTGAGGAATTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: GKRLKDFSLRLGTRQMPAIEGVL*LRNCRG
Trigger: ACCTCTGCAATTCCTCAAGCAAAGCACTCCTTCTAT...AGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCCTTCAGCCTTTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR TCA 72 bp TGGACTGCAGTCAACTTGAAGAGGCAGCAGGGCCAGTaGGAGCTGCCACGCCGCGAGTGGTCTTTTTGCTGC +
Preference number: 3 (lower is better)
Translates to: WTAVNLKRQQGQ*ELPRREWSFCC
Trigger: GCAGCAAAAAGACCACTCGCGGCGTGGCAGCTCTCACTGGCCCTGCTGCCTCTTCAAGTTGACTGCAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 72 bp GTTCATCTTCACCGGCAGACAGCAGCACTCCTTCCCTaGCTCGTCTTGGGGCTGTGGCTGCTCCTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: VHLHRQTAALLP*LVLGLWLLLGF
Trigger: AAAACCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCCGGTGAAGATGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CCA 72 bp ACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTaGCTGCTCCTGGGTTTTCTGGTGGGCGGAATAATG +
Preference number: 3 (lower is better)
Translates to: TAALLPCLVLGL*LLLGFLVGGIM
Trigger: CATTATTCCGCCCACCAGAAAACCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 72 bp TGCCAAACTGAAGAGGAGGCTGGAAGCCCTAGGGCGTaGGGCTCTCCCAATACAAAGCATGCCAACCACTCC +
Preference number: 3 (lower is better)
Translates to: CQTEEEAGSPRA*GSPNTKHANHS
Trigger: GGAGTGGTTGGCATGCTTTGTATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTCAGTTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR CAA 90 bp CAGAGACACGTCAGGCTCTGCCAGCCGGACAGCAGCTGCCACAGTCTCTCACCCGCTTTGCTTGAGGAATaGCAGAGGTTAACACCAACA +
Preference number: 3 (lower is better)
Translates to: QRHVRLCQPDSSCHSLSPALLEE*QRLTPT
Trigger: TGTTGGTGTTAACCTCTGCAATTCCTCAAGCAAAGC...GGGTGAGAGACTGTGGCAGCTGCTGTCCGGCTGGCAGAGCCTGACGTGTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR TCA 72 bp TTACCCGGGGAGATCCAATGCAATCACGAGGGTCCATaGAAGTGGAAAAGGAGCCAGGCCTGGTGGCTCACG +
Preference number: 3 (lower is better)
Translates to: LPGEIQCNHEGP*KWKRSQAWWLT
Trigger: CGTGAGCCACCAGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCCCGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR TCA 72 bp GATGTGGGATTCTGGACAAGGTCAGTAGGGTGTTGCTaGCCCAGTGAGTATGATCAGAGACACGTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: DVGFWTRSVGCC*PSEYDQRHVRL
Trigger: GAGCCTGACGTGTCTCTGATCATACTCACTGGGTCAGCAACACCCTACTGACCTTGTCCAGAATCCCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CCA 72 bp GACAAGATCACCACACCCCTCTGTTTACTGAAGTCATaGAAGGCACTGTGGCCCAAGTCCATCTCTAGTGGG +
Preference number: 3 (lower is better)
Translates to: DKITTPLCLLKS*KALWPKSISSG
Trigger: CCCACTAGAGATGGACTTGGGCCACAGTGCCTTCCATGACTTCAGTAAACAGAGGGGTGTGGTGATCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 72 bp AGGTCTGCCCTGTTTATTGGGATACACATTCTTAGCTaGCAGCTGAATGCTCACATTGGCTCCTTGGCCGGA +
Preference number: 3 (lower is better)
Translates to: RSALFIGIHILS*QLNAHIGSLAG
Trigger: TCCGGCCAAGGAGCCAATGTGAGCATTCAGCTGGCAGCTAAGAATGTGTATCCCAATAAACAGGGCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR-3UTR CAA 90 bp GGTAAAAGGCTGAAGGATTTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTTGGACTGCAGTCAACTaGAAGAGGCAGCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: GKRLKDFSLRLGTRQMPAWTAVN*KRQQGQ
Trigger: CTGGCCCTGCTGCCTCTTCAAGTTGACTGCAGTCCA...AGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCCTTCAGCCTTTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 72 bp CGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTaGCCTGATATCAACTGGGATGTGGGATTCTGGACA +
Preference number: 3 (lower is better)
Translates to: RVDIGENSQETD*PDINWDVGFWT
Trigger: TGTCCAGAATCCCACATCCCAGTTGATATCAGGGCAATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR TCA 72 bp TGGCCTTTGCAAAAACAAATTAATAATGACCGTGGGTaGTGGACTGCAGTCAACTTGAAGAGGCAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: WPLQKQINNDRG*WTAVNLKRQQG
Trigger: GCCCTGCTGCCTCTTCAAGTTGACTGCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 72 bp TTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTaGCACTCTATTCAGCATAGTGCTGGGAGTTCTAGA +
Preference number: 3 (lower is better)
Translates to: FSKVRNKANACS*HSIQHSAGSSR
Trigger: TCTAGAACTCCCAGCACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR GCA 72 bp GGATTTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTaGTCTTGCCACTCTATTCAGCATAGTGCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: GFFSKVRNKANA*SCHSIQHSAGS
Trigger: ACTCCCAGCACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CCA 72 bp GTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTaGCCTTTGCAAAAACAAATTAATAATGACCGTGGG +
Preference number: 3 (lower is better)
Translates to: VWWFPSPLDSPA*PLQKQINNDRG
Trigger: CCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp CAGAGACACGTCAGGCTCTGCCAGCCGGACAGCAGCTGCCACAGTCTCTCACCCCCAGAGCTCCGCCCCTaGCGTCGGGCTCGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: QRHVRLCQPDSSCHSLSPPELRP*RRARSF
Trigger: AAACGAGCGAGCCCGACGCCAGGGGCGGAGCTCTGG...GGGTGAGAGACTGTGGCAGCTGCTGTCCGGCTGGCAGAGCCTGACGTGTCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 72 bp CACCGGCAGACAGCAGCACTCCTTCCCTGCCTCGTCTaGGGGCTGTGGCTGCTCCTGGGTTTTCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HRQTAALLPCLV*GLWLLLGFLVG
Trigger: GCCCACCAGAAAACCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCCGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp GCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGGGCTATCCCAGCTACCTaGGAGGCTGAGGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ADSSTPSLPRLGAVAAPGAIPAT*EAEARE
Trigger: TTCTCTTGCCTCAGCCTCCCAGGTAGCTGGGATAGC...CCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp AAGCATGCCAACCACTCCCACCAGTTACGCTCCTACTCTGTCCCCAAAGGAGTCATCTGTGGGGGCCTGTaGGCTCTCAGCCGACGCGGG +
Preference number: 4 (lower is better)
Translates to: KHANHSHQLRSYSVPKGVICGGL*ALSRRG
Trigger: CCCGCGTCGGCTGAGAGCCCACAGGCCCCCACAGAT...GACTCCTTTGGGGACAGAGTAGGAGCGTAACTGGTGGGAGTGGTTGGCATGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp GGCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGCACCCCTCTGTTTACTaGAGTCATGGAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GRQQHSFPASSWGCGCSWHPSVY*SHGRHC
Trigger: ACAGTGCCTTCCATGACTTCAGTAAACAGAGGGGTG...CCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp AGCTGCCAAACTGAAGAGGAGGCTGGAAGCCCTAGGGCGTGCGGCTCTCCCAATTCACAGCTGCCAAACTaGAGAGGAGGCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SCQTEEEAGSPRACGSPNSQLPN*RGGWKP
Trigger: GGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCTGTGA...ATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTCAGTTTGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp GCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGGTCAGTAGGGTGTTGCTaGCCCAGTGAGTATGATCAG +
Preference number: 4 (lower is better)
Translates to: ADSSTPSLPRLGAVAAPGSVGCC*PSEYDQ
Trigger: CTGATCATACTCACTGGGTCAGCAACACCCTACTGA...CCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp GCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGGGAAGAAATGCACGAATaGGTGAACTCCTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ADSSTPSLPRLGAVAAPGEEMHE*VNSWQE
Trigger: CTCCTGCCAGGAGTTCACTCATTCGTGCATTTCTTC...CCCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGAAGATGTCCACCTCCTaGCCCCTGGAACTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GRQQHSFPASSWGCGCSWKMSTS*PLELVN
Trigger: ATTCACAAGTTCCAGGGGGCAGGAGGTGGACATCTT...CCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp AAGCATGCCAACCACTCCCACCAGTTACGCTCCTACTCTGTCCCCAAAGGAGTCTTCCCTGCCTCGTCTTaGGGCTGTGGCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KHANHSHQLRSYSVPKGVFPASS*GCGCSW
Trigger: CCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAA...GACTCCTTTGGGGACAGAGTAGGAGCGTAACTGGTGGGAGTGGTTGGCATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAGGTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTGGTTCTCCTGTCGCACCTaGCTCCCCCAACTCGGCGAG +
Preference number: 4 (lower is better)
Translates to: RPGKQVWWFPSPLDSPAWFSCRT*LPQLGE
Trigger: CTCGCCGAGTTGGGGGAGGCAGGTGCGACAGGAGAA...CCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACACCTGCTTCCCTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTCCAGGAGGCGGAGGTTaGAATGAGCCGAGATCGCTC +
Preference number: 4 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGPGGGG*NEPRSL
Trigger: GAGCGATCTCGGCTCATTGCAACCTCCGCCTCCTGG...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGGCAAATGCCTGCTCTTaGCACTCTATTCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: GRQQHSFPASSWGCGCSWANACS*HSIQHS
Trigger: ACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGC...CCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTGGACTGCAGTCAACTTaGAGAGGCAGCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGGLQST*RGSRAS
Trigger: ACTGGCCCTGCTGCCTCTTCAAGTTGACTGCAGTCC...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTGCGGGCTCCCTCGCCTaGCAGCCCGCTTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TVFCKPGLILGKTARKLIAGSLA*QPAFLC
Trigger: GCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGC...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAGGTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTGGCAGCCGGACAGCAGCTaGCACAGTCTCTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: RPGKQVWWFPSPLDSPAWQPDSS*HSLSPS
Trigger: ACTGGGTGAGAGACTGTGGCAGCTGCTGTCCGGCTG...CCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACACCTGCTTCCCTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp AGACCAGGGAAGCAGGTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTGGGCGAAACTCCATCTGTaGGGGCCTGTGGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RPGKQVWWFPSPLDSPAWAKLHL*GPVGSQ
Trigger: CTGAGAGCCCACAGGCCCCCACAGATGGAGTTTCGC...CCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACACCTGCTTCCCTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp GGGAGATCCAATGCAATCACGAGGGTCCATGAAAGTGGAAAAGGAGCCAGGCCTGCAGGAGCTCTGTGGTaGCTGTCTTCTGTAAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRSNAITRVHESGKGARPAGALW*LSSVSP
Trigger: CGGGCTTACAGAAGACAGTCACCACAGAGCTCCTGC...AGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGGAGATCCAATGCAATCACGAGGGTCCATGAAAGTGGAAAAGGAGCCAGGCCTCTGCCACTTCCCAGCTaGAGCTTTGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GRSNAITRVHESGKGARPLPLPS*SFGSPL
Trigger: AAGGGGAGACCCAAAGCTGCAGCTGGGAAGTGGCAG...AGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp AGGCAAATGCCTGCTCTTGCCACTCTATTCAGCATAGTGCTGGGAGTTCTAGACCCAGGGTGGAGCGTCTaGCACTTCCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RQMPALATLFSIVLGVLDPGWSV*HFPAAA
Trigger: AGCTGCAGCTGGGAAGTGGCAGACGCTCCACCCTGG...GTCTAGAACTCCCAGCACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAGGTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTGGTCTTGGGGCTGTGGCTaGTCCTGGGTTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RPGKQVWWFPSPLDSPAWSWGCG*SWVFWW
Trigger: CCACCAGAAAACCCAGGAGCAGCCACAGCCCCAAGA...CCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACACCTGCTTCCCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTATGGTGGCACACACCTaGTATCCCAGCTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGMVAHT*YPSYLG
Trigger: TCCCAGGTAGCTGGGATAGCAGGTGTGTGCCACCAT...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTCAGTGCACTCCAGCCTaGCAACAGAGCGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGQCTPA*QQSETP
Trigger: TGGAGTTTCGCTCTGTTGCCAGGCTGGAGTGCACTG...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp GGGAGATCCAATGCAATCACGAGGGTCCATGAAAGTGGAAAAGGAGCCAGGCCTCTCGTCTTGGGGCTGTaGCTGCTCCTGGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GRSNAITRVHESGKGARPLVLGL*LLLGFL
Trigger: CAGAAAACCCAGGAGCAGCCACAGCCCCAAGACGAG...AGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGTAAAAGGCTGAAGGATTTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCAGCCCGCTTTCCTCTaGGGCGGGCGGTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GKRLKDFSLRLGTRQMPAQPAFL*GGRFSP
Trigger: CGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTG...AGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCCTTCAGCCTTTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTGAGTCTGTGGCCATTTaGCAGGGTTGTGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGESVAI*QGCVTN
Trigger: GTTGGTGACACAACCCTGGCAAATGGCCACAGACTC...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp CAGCTGACCTTAGGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCGCAGAAAGAACCAAGTaGGAGCCTGTGGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: QLTLGQEEHPRLPGEIQCAERTK*EPVELP
Trigger: AGGAAGTTCCACAGGCTCTCACTTGGTTCTTTCTGC...GCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCCTAAGGTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp AAGCATGCCAACCACTCCCACCAGTTACGCTCCTACTCTGTCCCCAAAGGAGTCTTCTTAGCTGCCAGCTaGATGCTCACATTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KHANHSHQLRSYSVPKGVFLAAS*MLTLAP
Trigger: AGGAGCCAATGTGAGCATTCAGCTGGCAGCTAAGAA...GACTCCTTTGGGGACAGAGTAGGAGCGTAACTGGTGGGAGTGGTTGGCATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp TGGTGTGTGACTAGCATCTTGGCAAATTCTTTCTTCTCAATATCCTCGCTCGGGAGACACGTCAGGCTCTaGCAGCCGGACAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WCVTSILANSFFSISSLGRHVRL*QPDSSC
Trigger: GCAGCTGCTGTCCGGCTGGCAGAGCCTGACGTGTCT...CCCGAGCGAGGATATTGAGAAGAAAGAATTTGCCAAGATGCTAGTCACACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTGTCTTGGGCCCAGGGTaGAGCGTCTGCCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: TVFCKPGLILGKTARKLIVLGPG*SVCHFP
Trigger: TGGGAAGTGGCAGACGCTCCACCCTGGGCCCAAGAC...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTTGGGATGTGGGATTCTaGACAAGGTCAGTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGWDVGF*TRSVGC
Trigger: ACACCCTACTGACCTTGTCCAGAATCCCACATCCCA...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTAGCACTTTGGGAGGCTaGGACGGGCGGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: TVFCKPGLILGKTARKLISTLGG*DGRITR
Trigger: CCTTGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCT...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp GGGAGATCCAATGCAATCACGAGGGTCCATGAAAGTGGAAAAGGAGCCAGGCCTAATCACGAGGGTCCATaGAAGTGGAAAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRSNAITRVHESGKGARPNHEGP*KWKRSQ
Trigger: CTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATT...AGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp ACTGTCTTCTGTAAGCCCGGGTTGATATTGGGGAAAACAGCCAGGAAACTGATTGGCAAGAGAATCGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TVFCKPGLILGKTARKLIGKRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCGATTCTCTTGCC...AATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAGGTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTGGATTCAGACTCACAGCTaGCAAACTGAAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RPGKQVWWFPSPLDSPAWIQTHS*QTEEEA
Trigger: AGCCTCCTCTTCAGTTTGGCAGCTGTGAGTCTGAAT...CCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACACCTGCTTCCCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp TTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTGCCACTCTATTCAGCCAGCAGCTCTTGTCTTaGGCCCAGGGTGGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: FSLRLGTRQMPALATLFSQQLLS*AQGGAS
Trigger: AGACGCTCCACCCTGGGCCCAAGACAAGAGCTGCTG...GCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 72 bp AGGAGCTCTGTGGTGACTGTCTTCTGTAAGCCCGGGTaGATATTGGGGAAAACAGCCAGGAAACTGATTGCC +
Preference number: 4 (lower is better)
Translates to: RSSVVTVFCKPG*ILGKTARKLIA
Trigger: GGCAATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGTCACCACAGAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp CTGCCTGGCCTTTGCAAAAACAAATTAATAATGACCGTGGGTGATGGACTGCAGAGTTTGAGGCTGCACTaGGCCATGATCGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: LPGLCKNKLIMTVGDGLQSLRLH*AMIAAL
Trigger: CAGTGCAGCGATCATGGCTCAGTGCAGCCTCAAACT...CTGCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp GGTAAAAGGCTGAAGGATTTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTGGCTGTGGCTGCTCCTaGGTTTTCTGGTGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GKRLKDFSLRLGTRQMPAGCGCS*VFWWAE
Trigger: TTCCGCCCACCAGAAAACCCAGGAGCAGCCACAGCC...AGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCCTTCAGCCTTTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp CTGCCTGGCCTTTGCAAAAACAAATTAATAATGACCGTGGGTGATGGACTGCAGTTGACGCCAGGACTTTaGCAAGATCACCACACCCCT +
Preference number: 4 (lower is better)
Translates to: LPGLCKNKLIMTVGDGLQLTPGL*QDHHTP
Trigger: AGGGGTGTGGTGATCTTGTCAAAGTCCTGGCGTCAA...CTGCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp CTGCCTGGCCTTTGCAAAAACAAATTAATAATGACCGTGGGTGATGGACTGCAGCTGAGGTCAGGAATTTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LPGLCKNKLIMTVGDGLQLRSGI*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAATTCCTGACCTCAG...CTGCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp TTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTGCCACTCTATTCAGCCCAAGTGAGAGCCTGTaGAACTTCCTCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSLRLGTRQMPALATLFSPSESL*NFLPPA
Trigger: TGCTGGAGGGAGGAAGTTCCACAGGCTCTCACTTGG...GCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp CGGAGGAGTAAGGGTTGTTACGGCAGAAAGAACCAAGTGAGAGCCTGTGGAACTATATCAACTGGGATGTaGGATTCTGGACAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RRSKGCYGRKNQVRACGTISTGM*DSGQGQ
Trigger: CTGACCTTGTCCAGAATCCCACATCCCAGTTGATAT...AGTTCCACAGGCTCTCACTTGGTTCTTTCTGCCGTAACAACCCTTACTCCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 72 bp TCTGTGGTGACTGTCTTCTGTAAGCCCGGGTTGATATaGGGGAAAACAGCCAGGAAACTGATTGCCCTGATA +
Preference number: 4 (lower is better)
Translates to: SVVTVFCKPGLI*GKTARKLIALI
Trigger: TATCAGGGCAATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAGTCACCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp CGGAGGAGTAAGGGTTGTTACGGCAGAAAGAACCAAGTGAGAGCCTGTGGAACTGTTTCCAGATTTGAGTaGAATTCAGACTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RRSKGCYGRKNQVRACGTVSRFE*NSDSQL
Trigger: CAGCTGTGAGTCTGAATTTCACTCAAATCTGGAAAC...AGTTCCACAGGCTCTCACTTGGTTCTTTCTGCCGTAACAACCCTTACTCCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp GGGAGATCCAATGCAATCACGAGGGTCCATGAAAGTGGAAAAGGAGCCAGGCCTATACACATTCTTAGCTaGCAGCTGAATGCTCACATT +
Preference number: 4 (lower is better)
Translates to: GRSNAITRVHESGKGARPIHILS*QLNAHI
Trigger: AATGTGAGCATTCAGCTGGCAGCTAAGAATGTGTAT...AGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp GGTAAAAGGCTGAAGGATTTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCCCCAAAGGAGTCTGTaGCCATTTGCCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: GKRLKDFSLRLGTRQMPAPQRSL*PFARVV
Trigger: CACAACCCTGGCAAATGGCCACAGACTCCTTTGGGG...AGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCCTTCAGCCTTTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp TTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTGCCACTCTATTCAGCAAATGCACGAATGAGTaGACTCCTGGCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: FSLRLGTRQMPALATLFSKCTNE*TPGRSS
Trigger: AGAGCTCCTGCCAGGAGTTCACTCATTCGTGCATTT...GCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp TGGTGTGTGACTAGCATCTTGGCAAATTCTTTCTTCTCAATATCCTCGCTCGGGTGTTTACTGAAGTCATaGAAGGCACTGTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: WCVTSILANSFFSISSLGCLLKS*KALWPK
Trigger: CTTGGGCCACAGTGCCTTCCATGACTTCAGTAAACA...CCCGAGCGAGGATATTGAGAAGAAAGAATTTGCCAAGATGCTAGTCACACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
3UTR CAA 72 bp AGTGAGCCTGATAGAAGGAGTGCTTTGCTTGAGGAATaGCAGAGGTTAACACCAACATCAGAGACCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SEPDRRSALLEE*QRLTPTSETRE
Trigger: TTCCCTGGTCTCTGATGTTGGTGTTAACCTCTGCAATTCCTCAAGCAAAGCACTCCTTCTATCAGGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR TCA 90 bp CTGCCTGGCCTTTGCAAAAACAAATTAATAATGACCGTGGGTGATGGACTGCAGAAGGAGTGCTTTGCTTaGGGAATTGCAGAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LPGLCKNKLIMTVGDGLQKECFA*GIAEVN
Trigger: GTTAACCTCTGCAATTCCTCAAGCAAAGCACTCCTT...CTGCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp TGGTGTGTGACTAGCATCTTGGCAAATTCTTTCTTCTCAATATCCTCGCTCGGGAGCCAGGAAACTGATTaGCCTGATATCAACTGGGAT +
Preference number: 4 (lower is better)
Translates to: WCVTSILANSFFSISSLGSQETD*PDINWD
Trigger: ATCCCAGTTGATATCAGGGCAATCAGTTTCCTGGCT...CCCGAGCGAGGATATTGAGAAGAAAGAATTTGCCAAGATGCTAGTCACACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp TTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTGCCACTCTATTCAGCGGGAAGCAGGTGTGGTaGTTTCCATCTCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: FSLRLGTRQMPALATLFSGKQVW*FPSPLD
Trigger: ATCTAATGGAGATGGAAACCACCACACCTGCTTCCC...GCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR GCA 90 bp CTGCCTGGCCTTTGCAAAAACAAATTAATAATGACCGTGGGTGATGGACTGCAGATAGAAGGAGTGCTTTaGTTGAGGAATTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LPGLCKNKLIMTVGDGLQIEGVL*LRNCRG
Trigger: ACCTCTGCAATTCCTCAAGCAAAGCACTCCTTCTAT...CTGCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CCA 90 bp TTTTCTCTAAGGTTAGGAACAAGGCAAATGCCTGCTCTTGCCACTCTATTCAGCTTAGATTCACCTGCCTaGCCTTTGCAAAAACAAATT +
Preference number: 4 (lower is better)
Translates to: FSLRLGTRQMPALATLFSLDSPA*PLQKQI
Trigger: AATTTGTTTTTGCAAAGGCCAGGCAGGTGAATCTAA...GCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS CCA 90 bp CGGCGGGCGAGCTCCCTCCTGGCCCGGAGCTGCCGGAAGGCGCCCTaGATCGCTCTGGCCGCTCGGTCCTCGGCCGGCCCTGTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: RRASSLLARSCRKAP*IALAARSSAGPVGA
Trigger: GGCCCCCACAGGGCCGGCCGAGGACCGAGCGGCCAGAGCGATCCAGGGCGCCTTCCGGCAGCTCCGGGCCAGGAGGGAGCTCGCCCGCCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 90 bp CCAGGTACTCCCGGCGCTCCTCCCGGCGGCGGGCGAGCTCCCTCCTaGCCCGGAGCTGCCGGAAGGCGCCCTGGATCGCTCTGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: PGTPGAPPGGGRAPS*PGAAGRRPGSLWPL
Trigger: GAGCGGCCAGAGCGATCCAGGGCGCCTTCCGGCAGCTCCGGGCCAGGAGGGAGCTCGCCCGCCGCCGGGAGGAGCGCCGGGAGTACCTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 90 bp GGCGCCGAGCTCGGCCCGCAGCTGGATGGCCAGGGGCTGCCCGCCTaGGGCCGCCTCCGACAGCGGCGTGTTCCCGTAGCTGTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: GAELGPQLDGQGLPA*GRLRQRRVPVAVLA
Trigger: TGCGAGGACAGCTACGGGAACACGCCGCTGTCGGAGGCGGCCGCAGGCGGGCAGCCCCTGGCCATCCAGCTGCGGGCCGAGCTCGGCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 90 bp AAAGCGCCCTTGCTGTTGGGGCTGGCGCCGAGCTCGGCCCGCAGCTaGATGGCCAGGGGCTGCCCGCCTGCGGCCGCCTCCGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: KAPLLLGLAPSSARS*MARGCPPAAASDSG
Trigger: GCCGCTGTCGGAGGCGGCCGCAGGCGGGCAGCCCCTGGCCATCCAGCTGCGGGCCGAGCTCGGCGCCAGCCCCAACAGCAAGGGCGCTTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 90 bp CCTGTGGGGGCCTGTGGGCTCTCAGCCGACGCGGGCTCCCTCGCCTaGCAGCCCGCTTTCCTCTGCGGCGGGCGGTTCTCCCCGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PVGACGLSADAGSLA*QPAFLCGGRFSPGF
Trigger: GAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGCGTCGGCTGAGAGCCCACAGGCCCCCACAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534398.1
CDS GCA 90 bp CCAGCCCCCAGCCGGCGCCCCATGCCAGGCCCACCCTCCTGCGTCTaGTCCCGAAGCTCCAGCCTGGCCATAGCCAGCGCCTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PAPSRRPMPGPPSCV*SRSSSLAIASASSA
Trigger: GGCCGAGGAGGCGCTGGCTATGGCCAGGCTGGAGCTTCGGGAGCAGACGCAGGAGGGTGGGCCTGGCATGGGGCGCCGGCTGGGGGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534089.5
CDS GCA 90 bp TCTGTGGGGGCCTGTGGGCTCTCAGCCGACGCGGGCTCCCTCGCCTaGCAGCCCGCTTTCCTCTGCGGCGGGCGGTTCTCCCCGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SVGACGLSADAGSLA*QPAFLCGGRFSPGF
Trigger: GAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGCGTCGGCTGAGAGCCCACAGGCCCCCACAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS GCA 90 bp CTCTCAGCCGACGCGGGCTCCCTCGCCTGCCAGCCCGCTTTCCTCTaGGGCGGGCGGTTCTCCCCGGGCTTCCCTTGTGCCACGTCCCTC +
Preference number: 5 (lower is better)
Translates to: LSADAGSLACQPAFL*GGRFSPGFPCATSL
Trigger: GAGGGACGTGGCACAAGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGCGTCGGCTGAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS GCA 90 bp CTCTCAGCCGACGCGGGCTCCCTCGCCTGCCAGCCCGCTTTCCTCTaGGGCGGGCGGTTCTCCCCGGGCTTCCCAGCAGCAGCTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LSADAGSLACQPAFL*GGRFSPGFPAAALV
Trigger: GACAAGAGCTGCTGCTGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGCGTCGGCTGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000533004.5
CDS GCA 90 bp TATGTCCCAGCCCCCAGCCGGCGCCCCATGCCAGGCCCACCCTCCTaGGTCTGCTCCCGAAGCTCCAGCCTGGCCATAGCCAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: YVPAPSRRPMPGPPS*VCSRSSSLAIASAS
Trigger: GGAGGCGCTGGCTATGGCCAGGCTGGAGCTTCGGGAGCAGACGCAGGAGGGTGGGCCTGGCATGGGGCGCCGGCTGGGGGCTGGGACATA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534089.5
CDS CCA 90 bp CTCTGGGCCTCCTGGGCCCGGCGCTGCTGCTCAGCCTCCATGTTCTaGAGCATGGCCTCCGTGAGGCTCAGGTCCCACGAGCGCAGCACG +
Preference number: 5 (lower is better)
Translates to: LWASWARRCCSASMF*SMASVRLRSHERST
Trigger: CGTGCTGCGCTCGTGGGACCTGAGCCTCACGGAGGCCATGCTCCAGAACATGGAGGCTGAGCAGCAGCGCCGGGCCCAGGAGGCCCAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534089.5
CDS GCA 90 bp GCCCGCTTTCCTCTGCGGCGGGCGGTTCTCCCCGGGCTTCCCTTGTaGCACGTCCCTCCCCCAGGCCCTTTCCGGTCTCTGTGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: ARFPLRRAVLPGLPL*HVPPPGPFRSLCVQ
Trigger: TTGGACACACAGAGACCGGAAAGGGCCTGGGGGAGGGACGTGGCACAAGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS CCA 90 bp GCCGCTGCTCCTGGAACTGCGTGGGGCTATACTCAGGCCCGTCCGTaGGCCGCAGCAGCGACAGGTACCTCTCCTGCACCGCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: AAAPGTAWGYTQARP*AAAATGTSPAPPPA
Trigger: AGCTGGAGGCGGTGCAGGAGAGGTACCTGTCGCTGCTGCGGCCCACGGACGGGCCTGAGTATAGCCCCACGCAGTTCCAGGAGCAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 90 bp CTGGGGCCAGCACTAGAGGCCTGTGCCTGGCAGCTGCACGCGCACTaGGAGCAGCACCTGCAGCTGCTCAGCTGGCGGCCACTGGACCTT +
Preference number: 5 (lower is better)
Translates to: LGPALEACAWQLHAH*EQHLQLLSWRPLDL
Trigger: AAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCCAGTGCGCGTGCAGCTGCCAGGCACAGGCCTCTAGTGCTGGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 90 bp TACTCAGGCCCGTCCGTGGGCCGCAGCAGCGACAGGTACCTCTCCTaGACCGCCTCCAGCTGCCGCTGCACGACTGGGAACAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: YSGPSVGRSSDRYLS*TASSCRCTTGNRSS
Trigger: GGAAGACCTGTTCCCAGTCGTGCAGCGGCAGCTGGAGGCGGTGCAGGAGAGGTACCTGTCGCTGCTGCGGCCCACGGACGGGCCTGAGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS TCA 90 bp CCCGGCGCTGCTGCTCAGCCTCCATGTTCTGGAGCATGGCCTCCGTaGGGCTCAGGTCCCACGAGCGCAGCACGCTCACCACTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: PGAAAQPPCSGAWPP*GSGPTSAARSPLCP
Trigger: TGGACACAGTGGTGAGCGTGCTGCGCTCGTGGGACCTGAGCCTCACGGAGGCCATGCTCCAGAACATGGAGGCTGAGCAGCAGCGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534089.5
CDS GCA 90 bp CCTGTGCCTGGCAGCTGCACGCGCACTGGGAGCAGCACCTGCAGCTaGTCAGCTGGCGGCCACTGGACCTTGGTGACGAAAAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: PVPGSCTRTGSSTCS*SAGGHWTLVTKKRR
Trigger: CCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCCAGTGCGCGTGCAGCTGCCAGGCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 90 bp AGGGTCATACTTCCACACCGCTCAGCCTCGGCCTCCTTGTGCCTCTaGGCCTCCTGGGCCCGGCGCTGCTGCTCAGCCTCCATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: RVILPHRSASASLCL*ASWARRCCSASMFW
Trigger: CCAGAACATGGAGGCTGAGCAGCAGCGCCGGGCCCAGGAGGCCCAGAGGCACAAGGAGGCCGAGGCTGAGCGGTGTGGAAGTATGACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534089.5
CDS GCA 90 bp CGCAGCAGCGACAGGTACCTCTCCTGCACCGCCTCCAGCTGCCGCTaGACGACTGGGAACAGGTCTTCCTCTCGCAGGTCGAACACCAGC +
Preference number: 5 (lower is better)
Translates to: RSSDRYLSCTASSCR*TTGNRSSSRRSNTS
Trigger: GCTGGTGTTCGACCTGCGAGAGGAAGACCTGTTCCCAGTCGTGCAGCGGCAGCTGGAGGCGGTGCAGGAGAGGTACCTGTCGCTGCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 90 bp ACGCGCACTGGGAGCAGCACCTGCAGCTGCTCAGCTGGCGGCCACTaGACCTTGGTGACGAAAAAGAGGCGGAAGTGCTCCAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: TRTGSSTCSCSAGGH*TLVTKKRRKCSSRC
Trigger: GCAGCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCCAGTGCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 90 bp TCGTCTCCGGCCTCAGGGGCTCCGGGTTCACCGTGTCCACATAGTTaGTATCCTGGTAGCGCAGGAAGGTGGCCGCCTGGCCCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: SSPASGAPGSPCPHS*YPGSAGRWPPGPKG
Trigger: ACCCTTTGGGCCAGGCGGCCACCTTCCTGCGCTACCAGGATACCAACTATGTGGACACGGTGAACCCGGAGCCCCTGAGGCCGGAGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000532625.1
CDS CCA 90 bp GCACACGTTTTATTGGGACTGGGGCCAGCACTAGAGGCCTGTGCCTaGCAGCTGCACGCGCACTGGGAGCAGCACCTGCAGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: AHVLLGLGPALEACA*QLHAHWEQHLQLLS
Trigger: GCTGAGCAGCTGCAGGTGCTGCTCCCAGTGCGCGTGCAGCTGCCAGGCACAGGCCTCTAGTGCTGGCCCCAGTCCCAATAAAACGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 90 bp CACTGGACCTTGGTGACGAAAAAGAGGCGGAAGTGCTCCAGCCGCTaGTCCTGGAACTGCGTGGGGCTATACTCAGGCCCGTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: HWTLVTKKRRKCSSR*SWNCVGLYSGPSVG
Trigger: GCCCACGGACGGGCCTGAGTATAGCCCCACGCAGTTCCAGGAGCAGCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 90 bp TCAGCTGGCGGCCACTGGACCTTGGTGACGAAAAAGAGGCGGAAGTaGTCCAGCCGCTGCTCCTGGAACTGCGTGGGGCTATACTCAGGC +
Preference number: 5 (lower is better)
Translates to: SAGGHWTLVTKKRRK*SSRCSWNCVGLYSG
Trigger: GCCTGAGTATAGCCCCACGCAGTTCCAGGAGCAGCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS-3UTR CAA 90 bp GGCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGGGAGTCTGTGGCCATTaGCCAGGGTTGTGTCACCAA +
Preference number: 5 (lower is better)
Translates to: GRQQHSFPASSWGCGCSWGVCGH*PGLCHQ
Trigger: TTGGTGACACAACCCTGGCAAATGGCCACAGACTCC...CCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS GCA 90 bp CCATCGGCACGGATGCGGTTGCCTACATCTTTCATCAGCACATCGTaGAGCTCGGTGACCTGGCACTTCAGCCCAGGCGCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSARMRLPTSFISTS*SSVTWHFSPGASSS
Trigger: GGAGGAAGAGGCGCCTGGGCTGAAGTGCCAGGTCACCGAGCTGCACGATGTGCTGATGAAAGATGTAGGCAACCGCATCCGTGCCGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527139.7
ENST00000532625.1
ENST00000534089.5
CDS CCA 90 bp GGTCCCACCCACGCAGAACAAGCCCTCTTTACAGATCACCAGACGTaGGGAGAGCAGGGCTGCAGGCCAATAAGAGGAGGCTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GPTHAEQALFTDHQT*GEQGCRPIRGGWGR
Trigger: CCTTCCCCAGCCTCCTCTTATTGGCCTGCAGCCCTGCTCTCCCCACGTCTGGTGATCTGTAAAGAGGGCTTGTTCTGCGTGGGTGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS TCA 90 bp GCTGTCTGTCCAAACCCCAAATCGCCCACGTCTGGCCCGGAGAACTaGCCGGCCATCGGCACGGATGCGGTTGCCTACATCTTTCATCAG +
Preference number: 5 (lower is better)
Translates to: AVCPNPKSPTSGPEN*PAIGTDAVAYIFHQ
Trigger: CTGATGAAAGATGTAGGCAACCGCATCCGTGCCGATGGCCGGTCAGTTCTCCGGGCCAGACGTGGGCGATTTGGGGTTTGGACAGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532625.1
ENST00000534089.5
CDS GCA 90 bp AGCTCTTGTCTTGGGCCCAGGGTGGAGCGTCTGCCACTTCCCAGCTaGAGCTTTGGGTCTCCCCTTCTTACTGTCCATTCTCCTGTCGCA +
Preference number: 5 (lower is better)
Translates to: SSCLGPRVERLPLPS*SFGSPLLTVHSPVA
Trigger: TGCGACAGGAGAATGGACAGTAAGAAGGGGAGACCCAAAGCTGCAGCTGGGAAGTGGCAGACGCTCCACCCTGGGCCCAAGACAAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000533004.5
CDS TCA 90 bp GAGCTTGGTCTTGTCCATGCACCTCCACTCACACTGGTCGTGCTCTaGGATCCTCCGGCTAAGCTCACAGTAGGCCTGTTGCAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ELGLVHAPPLTLVVL*DPPAKLTVGLLQLG
Trigger: ACCCAGCTGCAACAGGCCTACTGTGAGCTTAGCCGGAGGATCTCAGAGCACGACCAGTGTGAGTGGAGGTGCATGGACAAGACCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534089.5
CDS-3UTR CAA 90 bp GGCAGACAGCAGCACTCCTTCCCTGCCTCGTCTTGGGGCTGTGGCTGCTCCTGGGCTTTGCTTGAGGAATaGCAGAGGTTAACACCAACA +
Preference number: 5 (lower is better)
Translates to: GRQQHSFPASSWGCGCSWALLEE*QRLTPT
Trigger: TGTTGGTGTTAACCTCTGCAATTCCTCAAGCAAAGC...CCAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS TCA 90 bp GAGCTTGGTCTTGTCCATGCACCTCCACTCACACTGGTCGTGCTCTaGGATCCTCCGGCTAAGCTCACAGTAGGCCTGTTGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: ELGLVHAPPLTLVVL*DPPAKLTVGLLQLL
Trigger: AAGGAGCTGCAACAGGCCTACTGTGAGCTTAGCCGGAGGATCTCAGAGCACGACCAGTGTGAGTGGAGGTGCATGGACAAGACCAAGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS-3UTR CAA 90 bp AGGCAAATGCCTGCTCTTGCCACTCTATTCAGCATAGTGCTGGGAGTTCTAGACGCAGCAGCTCTTGTCTaGGGCCCAGGGTGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: RQMPALATLFSIVLGVLDAAALV*GPGWSV
Trigger: GACGCTCCACCCTGGGCCCAAGACAAGAGCTGCTGC...GTCTAGAACTCCCAGCACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CAA 90 bp AGACCAGGGAAGCAGGTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTGGTGGACTGCAGTCAACTaGAAGAGGCAGCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RPGKQVWWFPSPLDSPAWWTAVN*KRQQGQ
Trigger: CTGGCCCTGCTGCCTCTTCAAGTTGACTGCAGTCCA...CCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACACCTGCTTCCCTGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CAA 90 bp AGACCAGGGAAGCAGGTGTGGTGGTTTCCATCTCCATTAGATTCACCTGCCTGGGATAGAAGGAGTGCTTaGCTTGAGGAATTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RPGKQVWWFPSPLDSPAWDRRSA*LEELQR
Trigger: CCTCTGCAATTCCTCAAGCAAAGCACTCCTTCTATC...CCAGGCAGGTGAATCTAATGGAGATGGAAACCACCACACCTGCTTCCCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CAA 90 bp GGCCAGGAAGAACATCCCAGATTACCCGGGGAGATCCAATGCAATCACGAGGGTACCCAGTTTCCAGATTaGAGTGAAATTCAGACTCAC +
Preference number: 5 (lower is better)
Translates to: GQEEHPRLPGEIQCNHEGTQFPD*SEIQTH
Trigger: GTGAGTCTGAATTTCACTCAAATCTGGAAACTGGGT...ACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGTTCTTCCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CAA 90 bp CTGCCTGGCCTTTGCAAAAACAAATTAATAATGACCGTGGGTGATGGACTGCAGGGTCTGCCCTGTTTATaGGGATACACATTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: LPGLCKNKLIMTVGDGLQGLPCL*GYTFLA
Trigger: AGCTAAGAATGTGTATCCCAATAAACAGGGCAGACC...CTGCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS-3UTR CAA 90 bp AGGCAAATGCCTGCTCTTGCCACTCTATTCAGCATAGTGCTGGGAGTTCTAGACTCACCTGCCTGGCCTTaGCAAAAACAAATTAATAAT +
Preference number: 5 (lower is better)
Translates to: RQMPALATLFSIVLGVLDSPAWP*QKQINN
Trigger: ATTATTAATTTGTTTTTGCAAAGGCCAGGCAGGTGA...GTCTAGAACTCCCAGCACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS CCA 72 bp TGGCCCGGAGCTGCCGGAAGGCGCCCTGGATCGCTCTaGCCGCTCGGTCCTCGGCCGGCCCTGTGGGGGCCT +
Preference number: 6 (lower is better)
Translates to: WPGAAGRRPGSL*PLGPRPALWGP
Trigger: AGGCCCCCACAGGGCCGGCCGAGGACCGAGCGGCCAGAGCGATCCAGGGCGCCTTCCGGCAGCTCCGGGCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 72 bp AGCTCCCTCCTGGCCCGGAGCTGCCGGAAGGCGCCCTaGATCGCTCTGGCCGCTCGGTCCTCGGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: SSLLARSCRKAP*IALAARSSAGP
Trigger: AGGGCCGGCCGAGGACCGAGCGGCCAGAGCGATCCAGGGCGCCTTCCGGCAGCTCCGGGCCAGGAGGGAGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 72 bp GACGCGGGCTCCCTCGCCTGCCAGCCCGCTTTCCTCTaGGGCGGGCGGTTCTCCCCGGGCTTCCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: DAGSLACQPAFL*GGRFSPGFPAA
Trigger: TGCTGCTGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000533004.5
CDS GCA 72 bp GCCTGTGGGCTCTCAGCCGACGCGGGCTCCCTCGCCTaGCAGCCCGCTTTCCTCTGCGGCGGGCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ACGLSADAGSLA*QPAFLCGGRFS
Trigger: GGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGCGTCGGCTGAGAGCCCACAGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527139.7
ENST00000533004.5
ENST00000534398.1
CDS GCA 72 bp GACGCGGGCTCCCTCGCCTGCCAGCCCGCTTTCCTCTaGGGCGGGCGGTTCTCCCCGGGCTTCCCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: DAGSLACQPAFL*GGRFSPGFPCA
Trigger: GGCACAAGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGGGAGCCCGCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS CCA 72 bp GCGGCGTCGGACCGAAAGCGCCCTTGCTGTTGGGGCTaGCGCCGAGCTCGGCCCGCAGCTGGATGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: AASDRKRPCCWG*RRARPAAGWPG
Trigger: CCCTGGCCATCCAGCTGCGGGCCGAGCTCGGCGCCAGCCCCAACAGCAAGGGCGCTTTCGGTCCGACGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 72 bp AGCCGGCGCCCCATGCCAGGCCCACCCTCCTGCGTCTaGTCCCGAAGCTCCAGCCTGGCCATAGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: SRRPMPGPPSCV*SRSSSLAIASA
Trigger: GGCGCTGGCTATGGCCAGGCTGGAGCTTCGGGAGCAGACGCAGGAGGGTGGGCCTGGCATGGGGCGCCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534089.5
CDS GCA 72 bp CCTCTGCGGCGGGCGGTTCTCCCCGGGCTTCCCTTGTaGCACGTCCCTCCCCCAGGCCCTTTCCGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: PLRRAVLPGLPL*HVPPPGPFRSL
Trigger: CAGAGACCGGAAAGGGCCTGGGGGAGGGACGTGGCACAAGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS GCA 72 bp GTGCCTGGCAGCTGCACGCGCACTGGGAGCAGCACCTaGAGCTGCTCAGCTGGCGGCCACTGGACCTTGGTG +
Preference number: 6 (lower is better)
Translates to: VPGSCTRTGSST*SCSAGGHWTLV
Trigger: CACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCCAGTGCGCGTGCAGCTGCCAGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 72 bp GCACTAGAGGCCTGTGCCTGGCAGCTGCACGCGCACTaGGAGCAGCACCTGCAGCTGCTCAGCTGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: ALEACAWQLHAH*EQHLQLLSWRP
Trigger: TGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCCAGTGCGCGTGCAGCTGCCAGGCACAGGCCTCTAGTGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 72 bp GAGCACCTCCACAGCTGCCAGGTGGCCCCCAAAGGCTaGACGGTACAGCGGCGTCGGACCGAAAGCGCCCTT +
Preference number: 6 (lower is better)
Translates to: EHLHSCQVAPKG*TVQRRRTESAL
Trigger: AAGGGCGCTTTCGGTCCGACGCCGCTGTACCGTGCAGCCTTTGGGGGCCACCTGGCAGCTGTGGAGGTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 72 bp AGGGGTGCTCCCGTCCTCTGCGTACACCCGGGGGTCTaGTCCGAGCTTCAGGAGCACCTCCACAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: RGAPVLCVHPGV*SELQEHLHSCQ
Trigger: CTGGCAGCTGTGGAGGTGCTCCTGAAGCTCGGAGCAGACCCCCGGGTGTACGCAGAGGACGGGAGCACCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 72 bp CAGCGAGGGCACAGACAGGCTCGTGGACATCACGACTaGACCATGGACGTCAGCCAGCAGGCCCCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: QRGHRQARGHHD*TMDVSQQAPGQ
Trigger: CTGCCCCGGGGCCTGCTGGCTGACGTCCATGGTGCAGTCGTGATGTCCACGAGCCTGTCTGTGCCCTCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS CCA 72 bp TCCTGGGCCCGGCGCTGCTGCTCAGCCTCCATGTTCTaGAGCATGGCCTCCGTGAGGCTCAGGTCCCACGAG +
Preference number: 6 (lower is better)
Translates to: SWARRCCSASMF*SMASVRLRSHE
Trigger: CTCGTGGGACCTGAGCCTCACGGAGGCCATGCTCCAGAACATGGAGGCTGAGCAGCAGCGCCGGGCCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534089.5
CDS CCA 72 bp CCTGGAACTGCGTGGGGCTATACTCAGGCCCGTCCGTaGGCCGCAGCAGCGACAGGTACCTCTCCTGCACCG +
Preference number: 6 (lower is better)
Translates to: PGTAWGYTQARP*AAAATGTSPAP
Trigger: CGGTGCAGGAGAGGTACCTGTCGCTGCTGCGGCCCACGGACGGGCCTGAGTATAGCCCCACGCAGTTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 72 bp CTGGCAACAGAGCGAAACTCCATCTGTGGGGGCCTGTaGGCTCTCAGCCGACGCGGGCTCCCTCGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: LATERNSICGGL*ALSRRGLPRLP
Trigger: TGGCAGGCGAGGGAGCCCGCGTCGGCTGAGAGCCCACAGGCCCCCACAGATGGAGTTTCGCTCTGTTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533004.5
CDS GCA 72 bp GGCAGCTGCACGCGCACTGGGAGCAGCACCTGCAGCTaGTCAGCTGGCGGCCACTGGACCTTGGTGACGAAA +
Preference number: 6 (lower is better)
Translates to: GSCTRTGSSTCS*SAGGHWTLVTK
Trigger: TTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCCAGTGCGCGTGCAGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 72 bp GGCACAGACAGGCTCGTGGACATCACGACTGCACCATaGACGTCAGCCAGCAGGCCCCGGGGCAGAGTGGCA +
Preference number: 6 (lower is better)
Translates to: GTDRLVDITTAP*TSASRPRGRVA
Trigger: TGCCACTCTGCCCCGGGGCCTGCTGGCTGACGTCCATGGTGCAGTCGTGATGTCCACGAGCCTGTCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS TCA 72 bp GCTGCTCAGCCTCCATGTTCTGGAGCATGGCCTCCGTaGGGCTCAGGTCCCACGAGCGCAGCACGCTCACCA +
Preference number: 6 (lower is better)
Translates to: AAQPPCSGAWPP*GSGPTSAARSP
Trigger: TGGTGAGCGTGCTGCGCTCGTGGGACCTGAGCCTCACGGAGGCCATGCTCCAGAACATGGAGGCTGAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534089.5
CDS CCA 72 bp GCCTCAGGGGCTCCGGGTTCACCGTGTCCACATAGTTaGTATCCTGGTAGCGCAGGAAGGTGGCCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: ASGAPGSPCPHS*YPGSAGRWPPG
Trigger: GCCAGGCGGCCACCTTCCTGCGCTACCAGGATACCAACTATGTGGACACGGTGAACCCGGAGCCCCTGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000532625.1
CDS CAA 90 bp ACTGGGAGCAGCACCTGCAGCTGCTCAGCTGGCGGCCACTGGACCTaGGTGACGAAAAAGAGGCGGAAGTGCTCCAGCCGCTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TGSSTCSCSAGGHWT*VTKKRRKCSSRCSW
Trigger: CCAGGAGCAGCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS TCA 72 bp CCTGCAGCTGCTCAGCTGGCGGCCACTGGACCTTGGTaGCGAAAAAGAGGCGGAAGTGCTCCAGCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: PAAAQLAATGPW*RKRGGSAPAAA
Trigger: AGCAGCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS TCA 72 bp CCAAACCCCAAATCGCCCACGTCTGGCCCGGAGAACTaGCCGGCCATCGGCACGGATGCGGTTGCCTACATC +
Preference number: 6 (lower is better)
Translates to: PNPKSPTSGPEN*PAIGTDAVAYI
Trigger: GATGTAGGCAACCGCATCCGTGCCGATGGCCGGTCAGTTCTCCGGGCCAGACGTGGGCGATTTGGGGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532625.1
ENST00000534089.5
CDS GCA 72 bp CGTTTTATTGGGACTGGGGCCAGCACTAGAGGCCTGTaGCTGGCAGCTGCACGCGCACTGGGAGCAGCACCT +
Preference number: 6 (lower is better)
Translates to: RFIGTGASTRGL*LAAARALGAAP
Trigger: AGGTGCTGCTCCCAGTGCGCGTGCAGCTGCCAGGCACAGGCCTCTAGTGCTGGCCCCAGTCCCAATAAAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 72 bp GGGAGCAGCACCTGCAGCTGCTCAGCTGGCGGCCACTaGACCTTGGTGACGAAAAAGAGGCGGAAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: GSSTCSCSAGGH*TLVTKKRRKCS
Trigger: GGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCTGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CAA 72 bp AGCACCTGCAGCTGCTCAGCTGGCGGCCACTGGACCTaGGTGACGAAAAAGAGGCGGAAGTGCTCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: STCSCSAGGHWT*VTKKRRKCSSR
Trigger: GCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCCGCCAGCTGAGCAGCTGCAGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CAA 90 bp CCACGTCTGGCCCGGAGAACTGACCGGCCATCGGCACGGATGCGGTaGCCTACATCTTTCATCAGCACATCGTGCAGCTCGGTGACCTGG +
Preference number: 6 (lower is better)
Translates to: PRLARRTDRPSARMR*PTSFISTSCSSVTW
Trigger: CCAGGTCACCGAGCTGCACGATGTGCTGATGAAAGATGTAGGCAACCGCATCCGTGCCGATGGCCGGTCAGTTCTCCGGGCCAGACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532625.1
ENST00000534089.5
CDS GCA 72 bp GGCCACTGGACCTTGGTGACGAAAAAGAGGCGGAAGTaGTCCAGCCGCTGCTCCTGGAACTGCGTGGGGCTA +
Preference number: 6 (lower is better)
Translates to: GHWTLVTKKRRK*SSRCSWNCVGL
Trigger: TAGCCCCACGCAGTTCCAGGAGCAGCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAAGGTCCAGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 72 bp TGGGGAGAGCAGGGCTGCAGGCCAATAAGAGGAGGCTaGGGAAGGCGTGCTCTGTCTGGATGGACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: WGEQGCRPIRGG*GRRALSGWTSW
Trigger: CCAGGAAGTCCATCCAGACAGAGCACGCCTTCCCCAGCCTCCTCTTATTGGCCTGCAGCCCTGCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS GCA 72 bp CGGATGCGGTTGCCTACATCTTTCATCAGCACATCGTaGAGCTCGGTGACCTGGCACTTCAGCCCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: RMRLPTSFISTS*SSVTWHFSPGA
Trigger: GGCGCCTGGGCTGAAGTGCCAGGTCACCGAGCTGCACGATGTGCTGATGAAAGATGTAGGCAACCGCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527139.7
ENST00000532625.1
ENST00000534089.5
CDS GCA 72 bp TTGGTGACGAAAAAGAGGCGGAAGTGCTCCAGCCGCTaGTCCTGGAACTGCGTGGGGCTATACTCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: LVTKKRRKCSSR*SWNCVGLYSGP
Trigger: CGGGCCTGAGTATAGCCCCACGCAGTTCCAGGAGCAGCGGCTGGAGCACTTCCGCCTCTTTTTCGTCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS GCA 72 bp CCCGGAGAACTGACCGGCCATCGGCACGGATGCGGTTaGCTACATCTTTCATCAGCACATCGTGCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: PGELTGHRHGCG*LHLSSAHRAAR
Trigger: CCGAGCTGCACGATGTGCTGATGAAAGATGTAGGCAACCGCATCCGTGCCGATGGCCGGTCAGTTCTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532625.1
ENST00000534089.5
CDS CCA 72 bp CTTTCCGGTCTCTGTGTGTCCAATTCGGCACTCCCCTaGCAGGTGGCTGTCCCTCTGCTCCTGAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LSGLCVSNSALP*QVAVPLLLSFW
Trigger: CCAGAAGCTCAGGAGCAGAGGGACAGCCACCTGCCAGGGGAGTGCCGAATTGGACACACAGAGACCGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS CAA 72 bp GCCCGGAGAACTGACCGGCCATCGGCACGGATGCGGTaGCCTACATCTTTCATCAGCACATCGTGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: ARRTDRPSARMR*PTSFISTSCSS
Trigger: CGAGCTGCACGATGTGCTGATGAAAGATGTAGGCAACCGCATCCGTGCCGATGGCCGGTCAGTTCTCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532625.1
ENST00000534089.5
CDS GCA 72 bp CTTGGGCCCAGGGTGGAGCGTCTGCCACTTCCCAGCTaGAGCTTTGGGTCTCCCCTTCTTACTGTCCATTCT +
Preference number: 6 (lower is better)
Translates to: LGPRVERLPLPS*SFGSPLLTVHS
Trigger: AGAATGGACAGTAAGAAGGGGAGACCCAAAGCTGCAGCTGGGAAGTGGCAGACGCTCCACCCTGGGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000533004.5
CDS GCA 72 bp GTCTGGCCCGGAGAACTGACCGGCCATCGGCACGGATaGGGTTGCCTACATCTTTCATCAGCACATCGTGCA +
Preference number: 6 (lower is better)
Translates to: VWPGELTGHRHG*GCLHLSSAHRA
Trigger: TGCACGATGTGCTGATGAAAGATGTAGGCAACCGCATCCGTGCCGATGGCCGGTCAGTTCTCCGGGCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532625.1
ENST00000534089.5
CDS GCA 72 bp CTCTTTACAGATCACCAGACGTGGGGAGAGCAGGGCTaGAGGCCAATAAGAGGAGGCTGGGGAAGGCGTGCT +
Preference number: 6 (lower is better)
Translates to: LFTDHQTWGEQG*RPIRGGWGRRA
Trigger: AGCACGCCTTCCCCAGCCTCCTCTTATTGGCCTGCAGCCCTGCTCTCCCCACGTCTGGTGATCTGTAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS CCA 72 bp CACGCAGAACAAGCCCTCTTTACAGATCACCAGACGTaGGGAGAGCAGGGCTGCAGGCCAATAAGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: HAEQALFTDHQT*GEQGCRPIRGG
Trigger: GCCTCCTCTTATTGGCCTGCAGCCCTGCTCTCCCCACGTCTGGTGATCTGTAAAGAGGGCTTGTTCTGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534398.1
CDS TCA 72 bp CTTGTCCATGCACCTCCACTCACACTGGTCGTGCTCTaGGATCCTCCGGCTAAGCTCACAGTAGGCCTGTTG +
Preference number: 6 (lower is better)
Translates to: LVHAPPLTLVVL*DPPAKLTVGLL
Trigger: CAACAGGCCTACTGTGAGCTTAGCCGGAGGATCTCAGAGCACGACCAGTGTGAGTGGAGGTGCATGGACAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534089.5
CDS CCA 72 bp GTGAGCTTGGTCTTGTCCATGCACCTCCACTCACACTaGTCGTGCTCTGAGATCCTCCGGCTAAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: VSLVLSMHLHSH*SCSEILRLSSQ
Trigger: CTGTGAGCTTAGCCGGAGGATCTCAGAGCACGACCAGTGTGAGTGGAGGTGCATGGACAAGACCAAGCTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527139.7
ENST00000534089.5
CDS CAA 72 bp ATAACAAGAGGCCACCGGCCATCGGCACGGATGCGGTaGCCTACATCTTTCATCAGCACATCGTGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: ITRGHRPSARMR*PTSFISTSCSS
Trigger: CGAGCTGCACGATGTGCTGATGAAAGATGTAGGCAACCGCATCCGTGCCGATGGCCGGTGGCCTCTTGTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527139.7
CDS CCA 72 bp GGCTGGGGAAGGCGTGCTCTGTCTGGATGGACTTCCTaGAATAGCCTCGAGTGCAAAAATAGCGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: GWGRRALSGWTS*NSLECKNSVSM
Trigger: CATGGACACGCTATTTTTGCACTCGAGGCTATTCCAGGAAGTCCATCCAGACAGAGCACGCCTTCCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534398.1