RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IPO9 (Homo sapiens)

Ensembl gene IDs: ENSG00000198700

Ensembl transcript IDs: ENST00000361565.9, ENST00000456707.1, ENST00000464348.5, ENST00000479374.1

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATGTGAAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTaGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTA +
Preference number: 1 (lower is better)
Translates to: HVKQQGHKQLASEPG*HGTTVNMPAGFSKV
Trigger: TACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTTCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp ATGCCATGTGAAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTaGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAA +
Preference number: 1 (lower is better)
Translates to: MPCEAAGAQAVSLRT*LAWDDCEHARRLLK
Trigger: TTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTTCACATGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 90 bp CCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTaGCACAATCAGGGCAGGAGTCTCACCGCTCATAGGCCCCGTGGA +
Preference number: 1 (lower is better)
Translates to: PCSLFPRKFYHLQVL*HNQGRSLTAHRPRG
Trigger: TCCACGGGGCCTATGAGCGGTGAGACTCCTGCCCTGATTGTGGCAAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 90 bp GGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTaGTTTGCCACAATCAGGGCAGGAGTCTCACCGCTCATAGGCCCC +
Preference number: 1 (lower is better)
Translates to: GLHAAFSLGSSIISR*FATIRAGVSPLIGP
Trigger: GGGGCCTATGAGCGGTGAGACTCCTGCCCTGATTGTGGCAAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp GAAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATaGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAA +
Preference number: 1 (lower is better)
Translates to: EAAGAQAVSLRTWLA*DDCEHARRLLKGSK
Trigger: TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp CCCTTAAGTGTTACTAGGGCCCTTTCCTCAGGACTCAAGTTCTCCTaGGGCAGGATGCCCAGTCCTCCCCCAAATCAGCATGAGAGCAGA +
Preference number: 1 (lower is better)
Translates to: PLSVTRALSSGLKFS*GRMPSPPPNQHESR
Trigger: TCTGCTCTCATGCTGATTTGGGGGAGGACTGGGCATCCTGCCTCAGGAGAACTTGAGTCCTGAGGAAAGGGCCCTAGTAACACTTAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp TCTGTCAGGGAGCCTCCGGTTGAGCACCAGAAGGGAACATGGCAATaGGGATCACTGATAGGCACAGGAAGACTGAAAGGACCTTCCACA +
Preference number: 1 (lower is better)
Translates to: SVREPPVEHQKGTWQ*GSLIGTGRLKGPST
Trigger: TGTGGAAGGTCCTTTCAGTCTTCCTGTGCCTATCAGTGATCCTCATTGCCATGTTCCCTTCTGGTGCTCAACCGGAGGCTCCCTGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 90 bp GGGCCTACCACCTGTTTCTATCATGTTCCTCAGGCAGGGCTGCAGTaGTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAA +
Preference number: 1 (lower is better)
Translates to: GPTTCFYHVPQAGLQ*YNSFLRAVLPKAHQ
Trigger: TTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCCCTGCCTGAGGAACATGATAGAAACAGGTGGTAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 90 bp AGCACCAAATCCGACTGGCACTGCCTTGAGATAAACTATGGAGTCTaGAAGGCCGAGGGTGGTTTTCTCAGCACCACTTGGTCAGATCTG +
Preference number: 1 (lower is better)
Translates to: STKSDWHCLEINYGV*KAEGGFLSTTWSDL
Trigger: CAGATCTGACCAAGTGGTGCTGAGAAAACCACCCTCGGCCTTGCAGACTCCATAGTTTATCTCAAGGCAGTGCCAGTCGGATTTGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp TCCCCTCTAGTTACAACCTTAGTTCAGGCTCTGGGTTTTCCCACCTaGACTGCTGTAGCTGCTGCCAGACTGCATTCCTTTCTCCCATCT +
Preference number: 1 (lower is better)
Translates to: SPLVTTLVQALGFPT*TAVAAARLHSFLPS
Trigger: AGATGGGAGAAAGGAATGCAGTCTGGCAGCAGCTACAGCAGTCCAGGTGGGAAAACCCAGAGCCTGAACTAAGGTTGTAACTAGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 90 bp AGGCTGACTTGGCCTTATGCCTTTAGCACCAAATCCGACTGGCACTaGCTTGAGATAAACTATGGAGTCTGCAAGGCCGAGGGTGGTTTT +
Preference number: 1 (lower is better)
Translates to: RLTWPYAFSTKSDWH*LEINYGVCKAEGGF
Trigger: AAAACCACCCTCGGCCTTGCAGACTCCATAGTTTATCTCAAGGCAGTGCCAGTCGGATTTGGTGCTAAAGGCATAAGGCCAAGTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 90 bp ACTCCAGAAGCAGGTATTGTTAGCTCCTTGCAAGTGTTCAAGGGTTaGCTTCTCCATGCAACTTACCCGACTTCCTCCCCCAGGTTACCA +
Preference number: 1 (lower is better)
Translates to: TPEAGIVSSLQVFKG*LLHATYPTSSPRLP
Trigger: TGGTAACCTGGGGGAGGAAGTCGGGTAAGTTGCATGGAGAAGGCAACCCTTGAACACTTGCAAGGAGCTAACAATACCTGCTTCTGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp TATCAGAGGCTGACTTGGCCTTATGCCTTTAGCACCAAATCCGACTaGCACTGCCTTGAGATAAACTATGGAGTCTGCAAGGCCGAGGGT +
Preference number: 1 (lower is better)
Translates to: YQRLTWPYAFSTKSD*HCLEINYGVCKAEG
Trigger: ACCCTCGGCCTTGCAGACTCCATAGTTTATCTCAAGGCAGTGCCAGTCGGATTTGGTGCTAAAGGCATAAGGCCAAGTCAGCCTCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp CTTACTGGTTCTGCAAACTTGAAGGAACCACTCCCCCTCTGGTCTTaGCTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACT +
Preference number: 1 (lower is better)
Translates to: LTGSANLKEPLPLWS*LPLLETDYRSVQPT
Trigger: AGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAACCAGTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp ATGAAGCTGCTCTTGCCTGTTCCTCCTGAGAACCCAGAGCAGCAGTaGTCCAGGGCACAAAGCATAATGATCTCTCATGAGGATTCCTAT +
Preference number: 1 (lower is better)
Translates to: MKLLLPVPPENPEQQ*SRAQSIMISHEDSY
Trigger: ATAGGAATCCTCATGAGAGATCATTATGCTTTGTGCCCTGGACCACTGCTGCTCTGGGTTCTCAGGAGGAACAGGCAAGAGCAGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp GGAGCCTTAAGCCTTCCCAAGCTCAGCAGTTCAATGCTACTGGCATaGGACCATTCTTTTGTGCCAATATCAGAGGCTGACTTGGCCTTA +
Preference number: 1 (lower is better)
Translates to: GALSLPKLSSSMLLA*DHSFVPISEADLAL
Trigger: TAAGGCCAAGTCAGCCTCTGATATTGGCACAAAAGAATGGTCTCATGCCAGTAGCATTGAACTGCTGAGCTTGGGAAGGCTTAAGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp GCTCTTGCTGTGAACCTCCCTGTGGCAGGGATGAGTCAGCGGAGCTaGCGAGGGATATTAGTTATGAATTTGCAATCACAAAATCAGGTG +
Preference number: 1 (lower is better)
Translates to: ALAVNLPVAGMSQRS*RGILVMNLQSQNQV
Trigger: CACCTGATTTTGTGATTGCAAATTCATAACTAATATCCCTCGTCAGCTCCGCTGACTCATCCCTGCCACAGGGAGGTTCACAGCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp AGCAGCAGCATGTGTGAAATTGAACTGAGTCACAGTGTAATCCAGTaGGTCAGGAAGAATGAGCCAAACATAGCTCCCAGCTATGGGTGG +
Preference number: 1 (lower is better)
Translates to: SSSMCEIELSHSVIQ*VRKNEPNIAPSYGW
Trigger: CCACCCATAGCTGGGAGCTATGTTTGGCTCATTCTTCCTGACTCACTGGATTACACTGTGACTCAGTTCAATTTCACACATGCTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp TTCATCTTTCTCCCCATGATTTGTGTGTGTGTGTGTGTGTGTGTGTaGTTGAGTCTTGCCTTGGAATGCAACGGTGTGATATCGGTTCAC +
Preference number: 1 (lower is better)
Translates to: FIFLPMICVCVCVCV*LSLALECNGVISVH
Trigger: GTGAACCGATATCACACCGTTGCATTCCAAGGCAAGACTCAATCACACACACACACACACACACACACAAATCATGGGGAGAAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp AAGGACACAGCCCTGGGGGAACTTACCAGGTCAACCCACAATGGGTaGATTTATAGTTTGTTAGTTAGTGGTCAGTTACCAACTTCTCTG +
Preference number: 1 (lower is better)
Translates to: KDTALGELTRSTHNG*IYSLLVSGQLPTSL
Trigger: CAGAGAAGTTGGTAACTGACCACTAACTAACAAACTATAAATTCACCCATTGTGGGTTGACCTGGTAAGTTCCCCCAGGGCTGTGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 90 bp TGTGCATGTATATATAGGAACAGCTTGAGGGGAAGGGTTATGTCATaGAATGAAGCAAAAACAAGACGACCTCCTCTGACAGAGGAGCCT +
Preference number: 1 (lower is better)
Translates to: CACIYRNSLRGRVMS*NEAKTRRPPLTEEP
Trigger: AGGCTCCTCTGTCAGAGGAGGTCGTCTTGTTTTTGCTTCATTGCATGACATAACCCTTCCCCTCAAGCTGTTCCTATATATACATGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp ATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTaGAAGGCAAGAGCTGGGCCTACCACCTGTTTCTATCATGTTCCT +
Preference number: 1 (lower is better)
Translates to: IVYVTQLTTEKLLSR*KARAGPTTCFYHVP
Trigger: AGGAACATGATAGAAACAGGTGGTAGGCCCAGCTCTTGCCTTCCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp CAGACTGAAGCTAGTTCTCTTTGGCCAAAGACAGGAGACAAAATATaGTCTAGAGTTTCTGTCAACATGTACTGGCCTCCAACAGATCTT +
Preference number: 1 (lower is better)
Translates to: QTEASSLWPKTGDKI*SRVSVNMYWPPTDL
Trigger: AAGATCTGTTGGAGGCCAGTACATGTTGACAGAAACTCTAGACCATATTTTGTCTCCTGTCTTTGGCCAAAGAGAACTAGCTTCAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 90 bp TCACATTTGCATCAACACTGCAACACTTTTCTAAGACACAAAACCTaGTCACTTCCCTGTTTAGTTATCTTGGGTAGTCTCCCATTCTCT +
Preference number: 1 (lower is better)
Translates to: SHLHQHCNTFLRHKT*SLPCLVILGSLPFS
Trigger: AGAGAATGGGAGACTACCCAAGATAACTAAACAGGGAAGTGATCAGGTTTTGTGTCTTAGAAAAGTGTTGCAGTGTTGATGCAAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 90 bp ATGAAACAGATAACTAGTATTACACTTGTTCTGTGGATTAGGAAATaGAGACATAATTTAAGCAGCTTGTCCAAAGTCACCCAACAGGCA +
Preference number: 1 (lower is better)
Translates to: MKQITSITLVLWIRK*RHNLSSLSKVTQQA
Trigger: TGCCTGTTGGGTGACTTTGGACAAGCTGCTTAAATTATGTCTCCATTTCCTAATCCACAGAACAAGTGTAATACTAGTTATCTGTTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 90 bp TGTTGGTCTGTGTGCCCCAGGTACAAGAGACCTTCCCAGGGAGCCTaGGTGACCAGGGCCCAGCATCCCTGGGGACTCCATGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: CWSVCPRYKRPSQGA*VTRAQHPWGLHAAF
Trigger: AAAGGCTGCATGGAGTCCCCAGGGATGCTGGGCCCTGGTCACCAAGGCTCCCTGGGAAGGTCTCTTGTACCTGGGGCACACAGACCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAGGCATGGGACGACTGTaGACATGCCCGCAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: STCTSRGPRPSALTHSRVGMGRL*TCPQAS
Trigger: AGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCC...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTTGTCATCAGTGTCACTaGCGAGGCCAAGGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTCHQCH*RGQGPR
Trigger: CCTTGGCCCTTGGCCTCGGCAGTGACACTGATGACA...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTCAAGACGACCTCCTCTaGCAGAGGAGCCTTAGTGTT +
Preference number: 2 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTQDDLL*QRSLSV
Trigger: AACACTAAGGCTCCTCTGTCAGAGGAGGTCGTCTTG...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCAAGGCCAGTGAGGGCTaGAAAATGGTTTGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVKASEG*KMVCGW
Trigger: CCAGCCGCAAACCATTTTGCAGCCCTCACTGGCCTT...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGATATCGGTTCACTaGAACCTCTGCTTCCCAAGT +
Preference number: 2 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTVISVH*NLCFPS
Trigger: ACTTGGGAAGCAGAGGTTGCAGTGAACCGATATCAC...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGGTGAGGGCTGCAAAATaGTTTGCGGCTGGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: GCSATIHSSELSSQRLTKVRAAK*FAAGPE
Trigger: TTCTGGGCCAGCCGCAAACCATTTTGCAGCCCTCAC...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGGGATTACATGGGTGTaGCACCACACCTGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFGITWV*HHTWPS
Trigger: GGAGGGCCAGGTGTGGTGCCACACCCATGTAATCCC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAGCATCTCAAGGCCAGTaGGGGCTGCAAAATGGTTTG +
Preference number: 2 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKASQGQ*GLQNGL
Trigger: CAAACCATTTTGCAGCCCTCACTGGCCTTGAGATGC...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTATATCAGAGGCTGACTTaGCCTTATGCCTTTAGCACC +
Preference number: 2 (lower is better)
Translates to: STCTSRGPRPSALTHSRVYQRLT*PYAFST
Trigger: GGTGCTAAAGGCATAAGGCCAAGTCAGCCTCTGATA...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 90 bp GCAAACTTGAAGGAACCACTCCCCCTCTGGTCTTGGCTTCCTCTTTaGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAG +
Preference number: 2 (lower is better)
Translates to: ANLKEPLPLWSWLPL*ETDYRSVQPTRIPK
Trigger: CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTCTTGCCTGTTCCTCCTaGGAACCCAGAGCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTLACSS*EPRAAV
Trigger: CACTGCTGCTCTGGGTTCTCAGGAGGAACAGGCAAG...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGCTGGTCTCGAACTCCTaGCCTCTGGTGATCCGCTGG +
Preference number: 2 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMLVSNS*PLVIRW
Trigger: CCAGCGGATCACCAGAGGTCAGGAGTTCGAGACCAG...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAGCATCTCAAGTTAACTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAASQVN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTAACTTGAGATGC...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACTGCAAGGCCGAGGGTaGTTTTCTCAGCACCACTTG +
Preference number: 2 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPLQGRG*FSQHHL
Trigger: CAAGTGGTGCTGAGAAAACCACCCTCGGCCTTGCAG...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGAGCTCGACAAACTCCTaGGAGCCCCTTGGTGCCCCA +
Preference number: 2 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMSSTNS*EPLGAP
Trigger: TGGGGCACCAAGGGGCTCCCAGGAGTTTGTCGAGCT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 90 bp ACTTACTGGTTCTGCAAACTTGAAGGAACCACTCCCCCTCTGGTCTaGGCTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCAC +
Preference number: 2 (lower is better)
Translates to: TYWFCKLEGTTPPLV*ASSFGNGLPFGSTH
Trigger: GTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAACCAGTAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAACTTTAGAGGCTTCCTaGGGGAAAGGGGATAACCTT +
Preference number: 2 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKTLEAS*GKGDNL
Trigger: AAGGTTATCCCCTTTCCCTCAGGAAGCCTCTAAAGT...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTTTGGGGCCATCCCCTTaGGTGGAGATTCAGATTCAC +
Preference number: 2 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFLGPSP*VEIQIH
Trigger: GTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAA...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTCCTGCTTCAGCTGCCTaGGTAGCTAGGATTATAGGC +
Preference number: 2 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFPASAA*VARIIG
Trigger: GCCTATAATCCTAGCTACTCAGGCAGCTGAAGCAGG...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCGGGTCCAAGACCTTCTaGTCTCACCCACAGCCGAGT +
Preference number: 2 (lower is better)
Translates to: TRYESCSATYWFCKLEGTGSKTF*SHPQPS
Trigger: ACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCC...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGAGGGAACCAAGGCTTaGAGGAAACGTCACTTGCCG +
Preference number: 2 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMEGTKA*RKRHLP
Trigger: CGGCAAGTGACGTTTCCTTCAAGCCTTGGTTCCCTC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTATTTCAGGCTATGTTTaGCAAGACACACTAGAATGT +
Preference number: 2 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTISGYV*QDTLEC
Trigger: ACATTCTAGTGTGTCTTGGCAAACATAGCCTGAAAT...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCATCTGCCTGGCAAATaGACAGGAAAGGCAAAACAA +
Preference number: 2 (lower is better)
Translates to: GCSATIHSSELSSQRLTKHLPGK*TGKAKQ
Trigger: TTGTTTTGCCTTTCCTGTGCATTTGCCAGGCAGATG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCAGGGCCCAGCATCCCTaGGGACTCCATGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPRAQHP*GLHAAF
Trigger: AAAGGCTGCATGGAGTCCCCAGGGATGCTGGGCCCT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGCCAATATCAGAGGCTaGCTTGGCCTTATGCCTTTA +
Preference number: 2 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFANIRG*LGLMPL
Trigger: TAAAGGCATAAGGCCAAGTCAGCCTCTGATATTGGC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGGCGATTACTTTTGGGTaGTTTGCTACTGGAATCTTG +
Preference number: 2 (lower is better)
Translates to: GCSATIHSSELSSQRLTKAITFG*FATGIL
Trigger: CAAGATTCCAGTAGCAAAGCACCCAAAAGTAATCGC...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGCAGCTACAATATCCTTaGGGCCATCCCCTTGAGTGG +
Preference number: 2 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMQLQYP*GHPLEW
Trigger: CCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTG...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCGCCTCAGAACCTGGCTaGCATGGGACGACTGTGAAC +
Preference number: 2 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPASEPG*HGTTVN
Trigger: GTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGC...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGTGTGGCACCACACCTaGCCCTCCTGGCATAATAAA +
Preference number: 2 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMVWHHT*PSWHNK
Trigger: TTTATTATGCCAGGAGGGCCAGGTGTGGTGCCACAC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 90 bp TTCCCAAGCTCAGCAGTTCAATGCTACTGGCATGAGACCATTCTTTaGTGCCAATATCAGAGGCTGACTTGGCCTTATGCCTTTAGCACC +
Preference number: 2 (lower is better)
Translates to: FPSSAVQCYWHETIL*CQYQRLTWPYAFST
Trigger: GGTGCTAAAGGCATAAGGCCAAGTCAGCCTCTGATATTGGCACAAAAGAATGGTCTCATGCCAGTAGCATTGAACTGCTGAGCTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 90 bp ACCCACTGGCGTTTAAATACTCCAGAAGCAGGTATTGTTAGCTCCTaGCAAGTGTTCAAGGGTTGCCTTCTCCATGCAACTTACCCGACT +
Preference number: 2 (lower is better)
Translates to: THWRLNTPEAGIVSS*QVFKGCLLHATYPT
Trigger: AGTCGGGTAAGTTGCATGGAGAAGGCAACCCTTGAACACTTGCAAGGAGCTAACAATACCTGCTTCTGGAGTATTTAAACGCCAGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTAGGTTGAGAAGAAAGTaGATCTCAAGGCCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTRLRRK*ISRPVR
Trigger: CCTCACTGGCCTTGAGATGCACTTTCTTCTCAACCT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGCAGGCTGTAGTGCAATaGTGCGATCTTGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMQAVVQ*CDLGLL
Trigger: CAGTAAGCCAAGATCGCACCATTGCACTACAGCCTG...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAGGCCATCCCCTTGAGTaGAGATTCAGATTCACTTTA +
Preference number: 2 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPGHPLE*RFRFTL
Trigger: TAAAGTGAATCTGAATCTCCACTCAAGGGGATGGCC...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCACACCTGGCCCTCCTaGCATAATAAACTTTATTTT +
Preference number: 2 (lower is better)
Translates to: GCSATIHSSELSSQRLTKHTWPS*HNKLYF
Trigger: AAAATAAAGTTTATTATGCCAGGAGGGCCAGGTGTG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCCATAGCTCCCAGCTATaGGTGGGGGATAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPHSSQL*VGDRMG
Trigger: TCCCATCCTATCCCCCACCCATAGCTGGGAGCTATG...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCATCTTCAGGGGAACTTTaGGAAATGTCCTTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPSSGEL*EMSFVP
Trigger: TGGAACAAAGGACATTTCTCAAAGTTCCCCTGAAGA...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGTCCCCCAAATCAGCATaGGAGCAGAAAGGACCCTTG +
Preference number: 2 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWSPKSA*EQKGPL
Trigger: CAAGGGTCCTTTCTGCTCTCATGCTGATTTGGGGGA...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTCAAGCTTCTTTTCCTTaGCACGATTTGTCCTCTACA +
Preference number: 2 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFQASFP*HDLSST
Trigger: TGTAGAGGACAAATCGTGTCAAGGAAAAGAAGCTTG...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCGGCTGCAAAATGGTTTaGGGCTGGCCCAGAAGGAGC +
Preference number: 2 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSGCKMV*GWPRRS
Trigger: GCTCCTTCTGGGCCAGCCGCAAACCATTTTGCAGCC...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTCTCCTGAGGCAGGATaGCCAGTCCTCCCCCAAATC +
Preference number: 2 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSSPEAG*PVLPQI
Trigger: GATTTGGGGGAGGACTGGGCATCCTGCCTCAGGAGA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCAGAACAACTCAAGCCTaGGAGGGACTTCTAGGCCTC +
Preference number: 2 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPRTTQA*EGLLGL
Trigger: GAGGCCTAGAAGTCCCTCCCAGGCTTGAGTTGTTCT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGCATAATGATCTCTCATaGGGATTCCTATCTGAACAC +
Preference number: 2 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKHNDLS*GFLSEH
Trigger: GTGTTCAGATAGGAATCCTCATGAGAGATCATTATG...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCCCACTTGGTCAGATCTaGCATCATTTCCCCAGTATC +
Preference number: 2 (lower is better)
Translates to: YVFHWTILELPKAMSCFLPLGQI*HHFPSI
Trigger: GATACTGGGGAAATGATGGCAGATCTGACCAAGTGG...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGATAAACTATGGAGTCTaGAAGGCCGAGGGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMINYGV*KAEGGF
Trigger: AAAACCACCCTCGGCCTTGCAGACTCCATAGTTTAT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 90 bp ACACTTGTTCTGTGGATTAGGAAATGGAGACATAATTTAAGCAGCTaGTCCAAAGTCACCCAACAGGCAAGTGGCAAAGCCAGGGTTCAA +
Preference number: 2 (lower is better)
Translates to: TLVLWIRKWRHNLSS*SKVTQQASGKARVQ
Trigger: TTGAACCCTGGCTTTGCCACTTGCCTGTTGGGTGACTTTGGACAAGCTGCTTAAATTATGTCTCCATTTCCTAATCCACAGAACAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGAGCCTCCCGAGTAGCTaGGATTACAAGTGCATGCCA +
Preference number: 2 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQSLPSS*DYKCMP
Trigger: TGGCATGCACTTGTAATCCCAGCTACTCGGGAGGCT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCTTCCAATCTCAGTCATaGAGGTTGAACACTGGGGAC +
Preference number: 2 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPFQSQS*RLNTGD
Trigger: GTCCCCAGTGTTCAACCTCCATGACTGAGATTGGAA...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGAAAATGGTTTGCGGCTaGCCCAGAAGGAGCAAATGT +
Preference number: 2 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLKMVCG*PRRSKC
Trigger: ACATTTGCTCCTTCTGGGCCAGCCGCAAACCATTTT...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCAGCCTCCTAAAGTGCTaGGATTACATGGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSSLLKC*DYMGVA
Trigger: TGCCACACCCATGTAATCCCAGCACTTTAGGAGGCT...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCATGAGGATTCCTATCTaGACACATCAGAAGTCCTAT +
Preference number: 2 (lower is better)
Translates to: YVFHWTILELPKAMSCFLMRIPI*THQKSY
Trigger: ATAGGACTTCTGATGTGTTCAGATAGGAATCCTCAT...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTGGAAAGGCTTAGAATaGAGCTGCTCTTGCCTGTTC +
Preference number: 2 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSWKGLE*SCSCLF
Trigger: GAACAGGCAAGAGCAGCTTCATTCTAAGCCTTTCCA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGGGTTATGTCATGCAATaGAGCAAAAACAAGACGACC +
Preference number: 2 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWGYVMQ*SKNKTT
Trigger: GGTCGTCTTGTTTTTGCTTCATTGCATGACATAACC...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCAAGGCAAACAGGTGCTaGGACACCTTATACCATGCA +
Preference number: 2 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSKANRC*DTLYHA
Trigger: TGCATGGTATAAGGTGTCTCAGCACCTGTTTGCCTT...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCCTCTGTGGTAATGTGTaGGAGAGGCATATTAAATAT +
Preference number: 2 (lower is better)
Translates to: TRYESCSATYWFCKLEGTLCGNV*ERHIKY
Trigger: ATATTTAATATGCCTCTCCCACACATTACCACAGAG...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCACAGGAGACAAAATATaGTCTAGAGTTTCTGTCAAC +
Preference number: 2 (lower is better)
Translates to: TRYESCSATYWFCKLEGTTGDKI*SRVSVN
Trigger: GTTGACAGAAACTCTAGACCATATTTTGTCTCCTGT...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGATCTTAGCCTTCCTCTaGCAGAGGACTCATCTGTCA +
Preference number: 2 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQILAFL*QRTHLS
Trigger: TGACAGATGAGTCCTCTGCCAGAGGAAGGCTAAGAT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 90 bp TGGAAAATCCTTACTTGTCAGTCTTTAAGTCCTACTGACTTTATCTaGTCAACATCTCTAATCCAGCTCTTCCACCCTATCCCCTCTAGT +
Preference number: 2 (lower is better)
Translates to: WKILTCQSLSPTDFI*STSLIQLFHPIPSS
Trigger: ACTAGAGGGGATAGGGTGGAAGAGCTGGATTAGAGATGTTGACAAGATAAAGTCAGTAGGACTTAAAGACTGACAAGTAAGGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCAAAGGGGATAACCTTTaGATATCAGACTCTGTGGTA +
Preference number: 2 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPKGDNL*ISDSVV
Trigger: TACCACAGAGTCTGATATTCAAAGGTTATCCCCTTT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCGGACACCTAGTGGCATaGAGAAATTACCAGCTACAA +
Preference number: 2 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSGHLVA*RNYQLQ
Trigger: TTGTAGCTGGTAATTTCTTCATGCCACTAGGTGTCC...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGTCAATGCTACTGGCATaGGACCATTCTTTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQSMLLA*DHSFVP
Trigger: TGGCACAAAAGAATGGTCTCATGCCAGTAGCATTGA...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCAAGTGTTCAAGGGTTaGCTTCTCCATGCAACTTAC +
Preference number: 2 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQQVFKG*LLHATY
Trigger: GTAAGTTGCATGGAGAAGGCAACCCTTGAACACTTG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR TCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGGATGCCACTTTAGGTTaGGAAGAAAGTGCATCTCAA +
Preference number: 2 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQDATLG*EESASQ
Trigger: TTGAGATGCACTTTCTTCTCAACCTAAAGTGGCATC...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR GCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGAAAGGAAGATCAAATTaGCATCTGTCTGGCTTATTT +
Preference number: 2 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWKGRSN*HLSGLF
Trigger: AAATAAGCCAGACAGATGGCAATTTGATCTTCCTTT...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGTGTAAGGTTAGTAGGTaGTCTGAGGTAAAAGTATTT +
Preference number: 2 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQCKVSR*SEVKVF
Trigger: AAATACTTTTACCTCAGACCACCTACTAACCTTACA...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 72 bp CAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTaGCATGGGACGACTGTGAACATGCCCGCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: QQGHKQLASEPG*HGTTVNMPAGF
Trigger: GAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGGGGCTGCAAAATGGTTaGCGGCTGGCCCAGAAGGAG +
Preference number: 3 (lower is better)
Translates to: CFWTRQQRALGTEVGVESGLQNG*RLAQKE
Trigger: CTCCTTCTGGGCCAGCCGCAAACCATTTTGCAGCCC...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp ACCGGTGAGCCTGGTCTGAATTGTCATCAGTGTCACTaGCGAGGCCAAGGGCCAAGGGTCAAGATGCCACTT +
Preference number: 3 (lower is better)
Translates to: TGEPGLNCHQCH*RGQGPRVKMPL
Trigger: AAGTGGCATCTTGACCCTTGGCCCTTGGCCTCGGCAGTGACACTGATGACAATTCAGACCAGGCTCACCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGACTCCTGGGAGCCCCTaGGTGCCCCAGCTGCTGTTT +
Preference number: 3 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKTPGSP*VPQLLF
Trigger: AAACAGCAGCTGGGGCACCAAGGGGCTCCCAGGAGT...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp GTTACTAGGGCCCTTTCCTCAGGACTCAAGTTCTCCTaGGGCAGGATGCCCAGTCCTCCCCCAAATCAGCAT +
Preference number: 3 (lower is better)
Translates to: VTRALSSGLKFS*GRMPSPPPNQH
Trigger: ATGCTGATTTGGGGGAGGACTGGGCATCCTGCCTCAGGAGAACTTGAGTCCTGAGGAAAGGGCCCTAGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp TCCGACTGGCACTGCCTTGAGATAAACTATGGAGTCTaGAAGGCCGAGGGTGGTTTTCTCAGCACCACTTGG +
Preference number: 3 (lower is better)
Translates to: SDWHCLEINYGV*KAEGGFLSTTW
Trigger: CCAAGTGGTGCTGAGAAAACCACCCTCGGCCTTGCAGACTCCATAGTTTATCTCAAGGCAGTGCCAGTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp GCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTaGTTTGCCACAATCAGGGCAGGAGTCTCACCGCTC +
Preference number: 3 (lower is better)
Translates to: AAFSLGSSIISR*FATIRAGVSPL
Trigger: GAGCGGTGAGACTCCTGCCCTGATTGTGGCAAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCTTGGGGCCATCCCCTaGAGTGGAGATTCAGATTCA +
Preference number: 3 (lower is better)
Translates to: GCSATIHSSELSSQRLTKLGAIP*SGDSDS
Trigger: TGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp GAGCCTCCGGTTGAGCACCAGAAGGGAACATGGCAATaGGGATCACTGATAGGCACAGGAAGACTGAAAGGA +
Preference number: 3 (lower is better)
Translates to: EPPVEHQKGTWQ*GSLIGTGRLKG
Trigger: TCCTTTCAGTCTTCCTGTGCCTATCAGTGATCCTCATTGCCATGTTCCCTTCTGGTGCTCAACCGGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp GTTGAGAAGAAAGTGCATCTCAAGGCCAGTGAGGGCTaGAAAATGGTTTGCGGCTGGCCCAGAAGGAGCAAA +
Preference number: 3 (lower is better)
Translates to: VEKKVHLKASEG*KMVCGWPRRSK
Trigger: TTTGCTCCTTCTGGGCCAGCCGCAAACCATTTTGCAGCCCTCACTGGCCTTGAGATGCACTTTCTTCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp CCGAGGGTGGTTTTCTCAGCACCACTTGGTCAGATCTaGCATCATTTCCCCAGTATCAGCAACTCCCACAAT +
Preference number: 3 (lower is better)
Translates to: PRVVFSAPLGQI*HHFPSISNSHN
Trigger: ATTGTGGGAGTTGCTGATACTGGGGAAATGATGGCAGATCTGACCAAGTGGTGCTGAGAAAACCACCCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp TGGCCTTATGCCTTTAGCACCAAATCCGACTGGCACTaGCTTGAGATAAACTATGGAGTCTGCAAGGCCGAG +
Preference number: 3 (lower is better)
Translates to: WPYAFSTKSDWH*LEINYGVCKAE
Trigger: CTCGGCCTTGCAGACTCCATAGTTTATCTCAAGGCAGTGCCAGTCGGATTTGGTGCTAAAGGCATAAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp CTACCACCTGTTTCTATCATGTTCCTCAGGCAGGGCTaGAGTGCTACAATTCATTCCTCAGAGCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: LPPVSIMFLRQG*SATIHSSELSS
Trigger: GGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCCCTGCCTGAGGAACATGATAGAAACAGGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp CTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTaGCACAATCAGGGCAGGAGTCTCACCGCTCATAGG +
Preference number: 3 (lower is better)
Translates to: LFPRKFYHLQVL*HNQGRSLTAHR
Trigger: CCTATGAGCGGTGAGACTCCTGCCCTGATTGTGGCAAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 72 bp TCTGCAAACTTGAAGGAACCACTCCCCCTCTGGTCTTaGCTTCCTCTTTTGGAAACGGACTACCGTTCGGTT +
Preference number: 3 (lower is better)
Translates to: SANLKEPLPLWS*LPLLETDYRSV
Trigger: AACCGAACGGTAGTCCGTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 72 bp ACTGGTTCTGCAAACTTGAAGGAACCACTCCCCCTCTaGTCTTGGCTTCCTCTTTTGGAAACGGACTACCGT +
Preference number: 3 (lower is better)
Translates to: TGSANLKEPLPL*SWLPLLETDYR
Trigger: ACGGTAGTCCGTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTATCCTCATTTACTCTTaGAACCCCAAACAGACTAAA +
Preference number: 3 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTILIYS*NPKQTK
Trigger: TTTAGTCTGTTTGGGGTTCAAAGAGTAAATGAGGAT...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp ACTGAGTCACAGTGTAATCCAGTGAGTCAGGAAGAATaGGCCAAACATAGCTCCCAGCTATGGGTGGGGGAT +
Preference number: 3 (lower is better)
Translates to: TESQCNPVSQEE*AKHSSQLWVGD
Trigger: ATCCCCCACCCATAGCTGGGAGCTATGTTTGGCTCATTCTTCCTGACTCACTGGATTACACTGTGACTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp CTTGCCTTGGAATGCAACGGTGTGATATCGGTTCACTaGAACCTCTGCTTCCCAAGTTCAAGCGATTCTCCT +
Preference number: 3 (lower is better)
Translates to: LALECNGVISVH*NLCFPSSSDSP
Trigger: AGGAGAATCGCTTGAACTTGGGAAGCAGAGGTTGCAGTGAACCGATATCACACCGTTGCATTCCAAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp ACCTGTTTCTATCATGTTCCTCAGGCAGGGCTGCAGTaGTACAATTCATTCCTCAGAGCTGTCCTCCCAAAG +
Preference number: 3 (lower is better)
Translates to: TCFYHVPQAGLQ*YNSFLRAVLPK
Trigger: CTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCCCTGCCTGAGGAACATGATAGAAACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTaGAAACTTGAAGGAACCACTCCCCCTCTGGTCTTG +
Preference number: 3 (lower is better)
Translates to: TRYESCSATYWF*KLEGTTPPLVL
Trigger: CAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 72 bp CCACTAACTAGATATGAGTCCTGCTCTGCCACTTACTaGTTCTGCAAACTTGAAGGAACCACTCCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: PLTRYESCSATY*FCKLEGTTPPL
Trigger: CAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGTTAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 72 bp TTTAAGCAGCTTGTCCAAAGTCACCCAACAGGCAAGTaGCAAAGCCAGGGTTCAAATCCAGGCAGTCTAGCT +
Preference number: 3 (lower is better)
Translates to: FKQLVQSHPTGK*QSQGSNPGSLA
Trigger: AGCTAGACTGCCTGGATTTGAACCCTGGCTTTGCCACTTGCCTGTTGGGTGACTTTGGACAAGCTGCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCTTCACTGAAATGGGGTaGGGGGCAAGAGTAGCCAGA +
Preference number: 3 (lower is better)
Translates to: TRYESCSATYWFCKLEGTFTEMG*GARVAR
Trigger: TCTGGCTACTCTTGCCCCCAACCCCATTTCAGTGAA...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp GTCATGGAGGTTGAACACTGGGGACACCTAGTGGCATaGAGAAATTACCAGCTACAATATCCTTGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: VMEVEHWGHLVA*RNYQLQYPWGH
Trigger: ATGGCCCCAAGGATATTGTAGCTGGTAATTTCTTCATGCCACTAGGTGTCCCCAGTGTTCAACCTCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp AGCCTTCCCAAGCTCAGCAGTTCAATGCTACTGGCATaGGACCATTCTTTTGTGCCAATATCAGAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: SLPKLSSSMLLA*DHSFVPISEAD
Trigger: GTCAGCCTCTGATATTGGCACAAAAGAATGGTCTCATGCCAGTAGCATTGAACTGCTGAGCTTGGGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp GTGAACCTCCCTGTGGCAGGGATGAGTCAGCGGAGCTaGCGAGGGATATTAGTTATGAATTTGCAATCACAA +
Preference number: 3 (lower is better)
Translates to: VNLPVAGMSQRS*RGILVMNLQSQ
Trigger: TTGTGATTGCAAATTCATAACTAATATCCCTCGTCAGCTCCGCTGACTCATCCCTGCCACAGGGAGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp GAGGTGAGCCCTCTAAGCCTTGGTCTGCACAGGTTCTaGTCATACATGCTCTTAAGCTTGCAAATTCAGAAG +
Preference number: 3 (lower is better)
Translates to: EVSPLSLGLHRF*SYMLLSLQIQK
Trigger: CTTCTGAATTTGCAAGCTTAAGAGCATGTATGAGCAGAACCTGTGCAGACCAAGGCTTAGAGGGCTCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CCA 72 bp CTGACTTGGCCTTATGCCTTTAGCACCAAATCCGACTaGCACTGCCTTGAGATAAACTATGGAGTCTGCAAG +
Preference number: 3 (lower is better)
Translates to: LTWPYAFSTKSD*HCLEINYGVCK
Trigger: CTTGCAGACTCCATAGTTTATCTCAAGGCAGTGCCAGTCGGATTTGGTGCTAAAGGCATAAGGCCAAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAGTCTTCAGGGGAACTTaGAGAAATGTCCTTTGTTCC +
Preference number: 3 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPVFRGT*RNVLCS
Trigger: GGAACAAAGGACATTTCTCAAAGTTCCCCTGAAGAC...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCCAAGGTATTGCCACATaGCCCAGACTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: TRYESCSATYWFCKLEGTQGIAT*PRLVSN
Trigger: GTTTGAGACCAGTCTGGGCAATGTGGCAATACCTTG...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACATTTCAGGCTATGTTaGCCAAGACACACTAGAATG +
Preference number: 3 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPHFRLC*PRHTRM
Trigger: CATTCTAGTGTGTCTTGGCAAACATAGCCTGAAATG...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp AGCCCATGCTCTGAACCACTAACTAGATATGAGTCCTaGTCTGCCACTTACTGGTTCTGCAAACTTGAAGGA +
Preference number: 3 (lower is better)
Translates to: SPCSEPLTRYES*SATYWFCKLEG
Trigger: TCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGTTAGTGGTTCAGAGCATGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGCCTACTGACTTTATCTaGTCAACATCTCTAATCCAG +
Preference number: 3 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKPTDFI*STSLIQ
Trigger: CTGGATTAGAGATGTTGACAAGATAAAGTCAGTAGG...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTTTATTGCGATTACTTTaGGGTGCTTTGCTACTGGAA +
Preference number: 3 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFLLRLL*GALLLE
Trigger: TTCCAGTAGCAAAGCACCCAAAAGTAATCGCAATAA...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp GCAGTGGTCCAGGGCACAAAGCATAATGATCTCTCATaGGGATTCCTATCTGAACACATCAGAAGTCCTATG +
Preference number: 3 (lower is better)
Translates to: AVVQGTKHNDLS*GFLSEHIRSPM
Trigger: CATAGGACTTCTGATGTGTTCAGATAGGAATCCTCATGAGAGATCATTATGCTTTGTGCCCTGGACCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp GCCCTGGGGGAACTTACCAGGTCAACCCACAATGGGTaGATTTATAGTTTGTTAGTTAGTGGTCAGTTACCA +
Preference number: 3 (lower is better)
Translates to: ALGELTRSTHNG*IYSLLVSGQLP
Trigger: TGGTAACTGACCACTAACTAACAAACTATAAATTCACCCATTGTGGGTTGACCTGGTAAGTTCCCCCAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGGATTTAGGACCACTTTaGGCACTAGATATAGAATGT +
Preference number: 3 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKDLGPL*ALDIEC
Trigger: ACATTCTATATCTAGTGCCAAAAGTGGTCCTAAATC...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp TGTCATGCAATGAAGCAAAAACAAGACGACCTCCTCTaGCAGAGGAGCCTTAGTGTTGTAGAAGAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: CHAMKQKQDDLL*QRSLSVVEEKQ
Trigger: TTGCTTCTCTTCTACAACACTAAGGCTCCTCTGTCAGAGGAGGTCGTCTTGTTTTTGCTTCATTGCATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCATATATAGGAACAGCTaGAGGGGAAGGGTTATGTCA +
Preference number: 3 (lower is better)
Translates to: YVFHWTILELPKAMSCFLIYRNS*RGRVMS
Trigger: TGACATAACCCTTCCCCTCAAGCTGTTCCTATATAT...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCGAGCAGAAAGGACCCTaGCCAAAGGATTTAGGACCA +
Preference number: 3 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSEQKGP*PKDLGP
Trigger: TGGTCCTAAATCCTTTGGCAAGGGTCCTTTCTGCTC...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGACTGGTCTCAAACTCTaGGGCTTAAGTGATCTGCCC +
Preference number: 3 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQTGLKL*GLSDLP
Trigger: GGGCAGATCACTTAAGCCCAAGAGTTTGAGACCAGT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp AAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTaGGAAATGTCCTTTGTTCCAGCATTCCTAAGTGAC +
Preference number: 3 (lower is better)
Translates to: KGSRDGMSSGEL*EMSFVPAFLSD
Trigger: GTCACTTAGGAATGCTGGAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGAAAAGGAAGATCAAATaGCCATCTGTCTGGCTTATT +
Preference number: 3 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMKRKIK*PSVWLI
Trigger: AATAAGCCAGACAGATGGCAATTTGATCTTCCTTTT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCAAGAGTAGCCAGAAATaGGCCTTTTATTTCCTACTT +
Preference number: 3 (lower is better)
Translates to: TRYESCSATYWFCKLEGTKSSQK*AFYFLL
Trigger: AAGTAGGAAATAAAAGGCCAATTTCTGGCTACTCTT...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp TGCAAAAGTATAGTATGTATTTCACTGGACCATCCTTaGACTTCCCAAAGCCATGTCCTGTTTCCTCTTGTC +
Preference number: 3 (lower is better)
Translates to: CKSIVCISLDHP*TSQSHVLFPLV
Trigger: GACAAGAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATACTATACTTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR-3UTR CAA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGTCAAGCTTCTTTTCCTaGACACGATTTGTCCTCTAC +
Preference number: 3 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQSSFFS*TRFVLY
Trigger: GTAGAGGACAAATCGTGTCAAGGAAAAGAAGCTTGA...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp CATCAACACTGCAACACTTTTCTAAGACACAAAACCTaGTCACTTCCCTGTTTAGTTATCTTGGGTAGTCTC +
Preference number: 3 (lower is better)
Translates to: HQHCNTFLRHKT*SLPCLVILGSL
Trigger: GAGACTACCCAAGATAACTAAACAGGGAAGTGATCAGGTTTTGTGTCTTAGAAAAGTGTTGCAGTGTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp CTTTTAACCAAAATAGATGAGAATGAGTCTCTATCCTaGTACCTGGTTTGTTGTTATTATGGTTTGTTCCCC +
Preference number: 3 (lower is better)
Translates to: LLTKIDENESLS*YLVCCYYGLFP
Trigger: GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTCATCTATTTTGGTTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR TCA 72 bp TTGGAAAATCCTTACTTGTCAGTCTTTAAGTCCTACTaGCTTTATCTTGTCAACATCTCTAATCCAGCTCTT +
Preference number: 3 (lower is better)
Translates to: LENPYLSVFKSY*LYLVNISNPAL
Trigger: AAGAGCTGGATTAGAGATGTTGACAAGATAAAGTCAGTAGGACTTAAAGACTGACAAGTAAGGATTTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR GCA 72 bp AAATTGGAATTTTATTGCGATTACTTTTGGGTGCTTTaGTACTGGAATCTTGGTAAAGTATGGTTAAGACCT +
Preference number: 3 (lower is better)
Translates to: KLEFYCDYFWVL*YWNLGKVWLRP
Trigger: AGGTCTTAACCATACTTTACCAAGATTCCAGTAGCAAAGCACCCAAAAGTAATCGCAATAAAATTCCAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGGCCGCAGTGAACTCTaGGGTGCGGGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTGRSEL*GAGVQE
Trigger: CTCCTGGACCCCCGCACCTCAGAGTTCACTGCGGCC...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGCCCGAGTTCCCGCCCTaGCTTGGAGATGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESPEFPP*LGDEGG
Trigger: TCCACCCTCATCTCCAAGGCAGGGCGGGAACTCGGG...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTCTGGGAGCCCCTTGGTaGCCCAGCTGCTGTTTACCA +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTLGAPW*PSCCLP
Trigger: TGGTAAACAGCAGCTGGGGCACCAAGGGGCTCCCAG...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGCGGGGGTCCAGGAGCTaGCTCACCACTTGCATCACA +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESRGSRS*LTTCIT
Trigger: TGTGATGCAAGTGGTGAGCCAGCTCCTGGACCCCCG...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGGCTGCAAAATGGTTTaGGGCTGGCCCAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTGCKMV*GWPRRS
Trigger: GCTCCTTCTGGGCCAGCCGCAAACCATTTTGCAGCC...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGTCTGCAGGAGTGGCCTaGCGAGCGGCATTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGSAGVA*RAALAS
Trigger: GGAGGCTAATGCCGCTCGCCAGGCCACTCCTGCAGA...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR TCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGATGTCCTGAGCCAGTaGGGCGACGACGGGATCATT +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVDVLSQ*GDDGII
Trigger: AATGATCCCGTCGTCGCCTCACTGGCTCAGGACATC...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGGGCCTGCATTATGCTaGCCAGAGTGGGAATCAGCC +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVGPALC*PEWESA
Trigger: GGCTGATTCCCACTCTGGTCAGCATAATGCAGGCCC...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCCACAAAGGCCGCAGTaGACTCTGAGGTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKPQRPQ*TLRCGG
Trigger: ACCCCCGCACCTCAGAGTTCACTGCGGCCTTTGTGG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCTCTGTGCTCTTGCTGTaGACCTCCCTGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVSVLLL*TSLWQG
Trigger: TCCCTGCCACAGGGAGGTTCACAGCAAGAGCACAGA...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGACTGGCAGCCCAAAGTaGCCGGCCCAAGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGTGSPK*PAQEER
Trigger: CCTTTCCTCTTGGGCCGGGCACTTTGGGCTGCCAGT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTACTGGGTTTTCCCACCTaGACTGCTGTAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVLGFPT*TAVAAA
Trigger: GGCAGCAGCTACAGCAGTCCAGGTGGGAAAACCCAG...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAGCTCCCAGCTATGGGTaGGGGATAGGATGGGACATC +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVAPSYG*GIGWDI
Trigger: GATGTCCCATCCTATCCCCCACCCATAGCTGGGAGC...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCTGGTCTCGAACTCCTaGCCTCTGGTGATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKLVSNS*PLVIRW
Trigger: CCAGCGGATCACCAGAGGTCAGGAGTTCGAGACCAG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTATGGCCAGGCTGCTCTTaGACTCTTGATGTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVWPGCS*TLDVVV
Trigger: GACCACGACATCAAGAGTTCAAGAGCAGCCTGGCCA...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGAGCCTAGGGCAAGCATaGATGCCTCATGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESSLGQA*MPHGSS
Trigger: GGAAGATCCATGAGGCATGCATGCTTGCCCTAGGCT...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGTTAAGCCATCAAGGATaGTGGGGAGGAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESLSHQG*WGGRAG
Trigger: TCCAGCCCTTCCTCCCCAGCATCCTTGATGGCTTAA...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCACAGCAACTCCCACAATaGCATGTGAAGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAQQLPQ*HVKQQG
Trigger: CCCCTGCTGCTTCACATGGCATTGTGGGAGTTGCTG...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAAGATGTGGGGCCATCTaGTATCTGGAGGGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPARCGAI*YLEGLN
Trigger: GTTCAGGCCCTCCAGATACCAGATGGCCCCACATCT...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGAAGGGCTGGAGCACGTaGGTACTCTCTGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESKGWST*VLSETF
Trigger: GAAAGTCTCAGAGAGTACCCACGTGCTCCAGCCCTT...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAGAGCCCTCTAAGCCTTaGTCTGCACAGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAEPSKP*SAQVLL
Trigger: GAGCAGAACCTGTGCAGACCAAGGCTTAGAGGGCTC...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 72 bp CTCTGGCAGAGGACTCATCTGTCAGGGAGCCTCCGGTaGAGCACCAGAAGGGAACATGGCAATGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: LWQRTHLSGSLR*STRREHGNEDH
Trigger: GTGATCCTCATTGCCATGTTCCCTTCTGGTGCTCAACCGGAGGCTCCCTGACAGATGAGTCCTCTGCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAGAACAAAGGCCTCTGTaGACTGCTGTACCACGGGAA +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAEQRPL*TAVPRE
Trigger: TTCCCGTGGTACAGCAGTTCACAGAGGCCTTTGTTC...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTAGAGTGCCACAGAGCTaGCTTTGCCTTCATACTGTC +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTRVPQS*LCLHTV
Trigger: GACAGTATGAAGGCAAAGTCAGCTCTGTGGCACTCT...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCATTCTGGGTTTTTGGCTaGCTTAGAGCGGGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAFWVFG*LRAGAD
Trigger: ATCCGCACCCGCTCTAAGTCAGCCAAAAACCCAGAA...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTACAAGACGACCTCCTCTaGCAGAGGAGCCTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVQDDLL*QRSLSV
Trigger: AACACTAAGGCTCCTCTGTCAGAGGAGGTCGTCTTG...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTATTGGGGCCATCCCCTTaGGTGGAGATTCAGATTCAC +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVLGPSP*VEIQIH
Trigger: GTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAA...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAACTGACGGATTGCCAGTaGCCCCTGGGGATCTACAGT +
Preference number: 4 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKLTDCQ*PLGIYS
Trigger: ACTGTAGATCCCCAGGGGGCACTGGCAATCCGTCAG...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGTGGCCCTGCTCATCATaGCACTGGGCTACTTGTTCC +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGWPCSS*HWATCS
Trigger: GGAACAAGTAGCCCAGTGGCATGATGAGCAGGGCCA...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAAGCGTCTCTGCCTGCTaGATCTTACTGAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVSVSAC*ILLRMA
Trigger: TGCCATCCTCAGTAAGATGCAGCAGGCAGAGACGCT...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGAAGGCCAGTGAGGGCTaGAAAATGGTTTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGKASEG*KMVCGW
Trigger: CCAGCCGCAAACCATTTTGCAGCCCTCACTGGCCTT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGTCTCCTGAGGCAGGATaGCCAGTCCTCCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKSPEAG*PVLPQI
Trigger: GATTTGGGGGAGGACTGGGCATCCTGCCTCAGGAGA...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGACTGGGGAGGAAGGGCTaGAGCACGTGGGTACTCTCT +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRLGRKG*STWVLS
Trigger: AGAGAGTACCCACGTGCTCCAGCCCTTCCTCCCCAG...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTACAGCTACAATATCCTTaGGGCCATCCCCTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVQLQYP*GHPLEW
Trigger: CCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTG...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAGTGTGGCACCACACCTaGCCCTCCTGGCATAATAAA +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAVWHHT*PSWHNK
Trigger: TTTATTATGCCAGGAGGGCCAGGTGTGGTGCCACAC...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAAGAACAACTCAAGCCTaGGAGGGACTTCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPARTTQA*EGLLGL
Trigger: GAGGCCTAGAAGTCCCTCCCAGGCTTGAGTTGTTCT...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAGAACCACTCCCCCTCTaGTCTTGGCTTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVEPLPL*SWLPLL
Trigger: CAAAAGAGGAAGCCAAGACCAGAGGGGGAGTGGTTC...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAATAGGCAGAATCTGCTaGATGGAGGACACCATGTGC +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAIGRIC*MEDTMC
Trigger: GCACATGGTGTCCTCCATGCAGCAGATTCTGCCTAT...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGATGCCCTCATCCATaGTGTAGATCTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGGCPHP*CRSPLP
Trigger: AGGGAGAGGAGATCTACAGCATGGATGAGGGCATCC...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGCTCCCCTTTTTAGATaGCGATGGTCTGTAGAACTC +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTAPLFR*RWSVEL
Trigger: GAGTTCTACAGACCATCGGCATCTAAAAAGGGGAGC...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGGGCCAAGGGTCAAGATaGCACTTTAGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESGQGSR*HFRLRR
Trigger: TCTTCTCAACCTAAAGTGGCATCTTGACCCTTGGCC...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGCCACTTGGTCAGATCTaGCATCATTTCCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESPLGQI*HHFPSI
Trigger: GATACTGGGGAAATGATGGCAGATCTGACCAAGTGG...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGGTCCAAGACCTTCTaGTCTCACCCACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRGSKTF*SHPQPS
Trigger: ACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCC...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCCAGGCAGGGCTGCAGTaGTACAATTCATTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVQAGLQ*YNSFLR
Trigger: TCTGAGGAATGAATTGTAGCACTGCAGCCCTGCCTG...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGACCCTGGGCCTAATTaGAGTTCACTAGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTDPGPN*SSLELS
Trigger: TGAAAGCTCTAGTGAACTGCAATTAGGCCCAGGGTC...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGACACGCATGGCTCCATaGACGGCATTTAAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGTRMAP*TAFKSP
Trigger: CGGAGACTTAAATGCCGTCCATGGAGCCATGCGTGT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAGCCTGTAGGAACTGCTaGATCAGTTCAGGGGACATA +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAACRNC*ISSGDI
Trigger: TATGTCCCCTGAACTGATCCAGCAGTTCCTACAGGC...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCTGCAAGGCCGAGGGTaGTTTTCTCAGCACCACTTG +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKLQGRG*FSQHHL
Trigger: CAAGTGGTGCTGAGAAAACCACCCTCGGCCTTGCAG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGAGGGCCCAGCATCCCTaGGGACTCCATGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKRAQHP*GLHAAF
Trigger: AAAGGCTGCATGGAGTCCCCAGGGATGCTGGGCCCT...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGTGCAGAAATTCGAACTaGTGGGGGCTGTGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKCRNSN*WGLCLV
Trigger: CACGAGACACAGCCCCCATCAGTTCGAATTTCTGCA...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGCGACTGGCACTGCCTTaGGATAAACTATGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGRLALP*DKLWSL
Trigger: CAGACTCCATAGTTTATCTCAAGGCAGTGCCAGTCG...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAGCCAATATCAGAGGCTaGCTTGGCCTTATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVANIRG*LGLMPL
Trigger: TAAAGGCATAAGGCCAAGTCAGCCTCTGATATTGGC...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCTGCCAGCTGACGGATTaGCAGTGCCCCCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTCQLTD*QCPLGI
Trigger: GATCCCCAGGGGGCACTGGCAATCCGTCAGCTGGCA...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTACACTGGAGCGCACTTTaGTTATCGATTCTCTCAACC +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVHWSAL*LSILST
Trigger: GGTTGAGAGAATCGATAAGCAAAGTGCGCTCCAGTG...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAGATCAGGACTTTGGCTaGACCCTTTTCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKDQDFG*TLFQLL
Trigger: GAGGAGCTGGAAAAGGGTGCAGCCAAAGTCCTGATC...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAATGGTAGTGACTTCCTaGGCTCCTGAGGCGGGGCAA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPMVVTS*APEAGQ
Trigger: TTGCCCCGCCTCAGGAGCGCAGGAAGTCACTACCAT...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGAGGTGTGAGCCACTATaGCCGGCCTACAAAAATTGG +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGRCEPL*PAYKNW
Trigger: CCAATTTTTGTAGGCCGGGCATAGTGGCTCACACCT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAACTGTCAGCACACGCATaGCTCCATGGACGGCATTTA +
Preference number: 4 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKLSAHA*LHGRHL
Trigger: TAAATGCCGTCCATGGAGCCATGCGTGTGCTGACAG...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAGACAGGAGCAACAAGTaGCATCTGTGTGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVDRSNK*HLCVCY
Trigger: GTAACAGACACACAGATGCCACTTGTTGCTCCTGTC...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGCTTTTTAGATGCCGATaGTCTGTAGAACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESLFRCR*SVELAS
Trigger: AGAGGCGAGTTCTACAGACCATCGGCATCTAAAAAG...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGTGAGGGCTGCAAAATaGTTTGCGGCTGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRVRAAK*FAAGPE
Trigger: TTCTGGGCCAGCCGCAAACCATTTTGCAGCCCTCAC...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGGCCTCAGAACCTGGCTaGCATGGGACGACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKASEPG*HGTTVN
Trigger: GTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGC...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGTTAGCCTCAGAACCTaGCTGGCATGGGACGACTGT +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRVSLRT*LAWDDC
Trigger: ACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAAC...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTAGCTCGACAAACTCCTaGGAGCCCCTTGGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTSSTNS*EPLGAP
Trigger: TGGGGCACCAAGGGGCTCCCAGGAGTTTGTCGAGCT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCACAAATTCAGAAGTGTTaGTCTGTGTGCCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAQIQKC*SVCPRY
Trigger: GTACCTGGGGCACACAGACCAACACTTCTGAATTTG...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 72 bp ATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTaGAAGGAACCACTCCCCCTCTGGTCTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MSPALPLTGSAN*KEPLPLWSWLP
Trigger: AGGAAGCCAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAATTTGCATTGGGCCCTaGCAGGCTTCAATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRICIGP*QASIWD
Trigger: GTCCCAGATTGAAGCCTGTCAGGGCCCAATGCAAAT...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGGAAAGCTTGGCAGATaGGAAGCTGGGAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFGKLGR*EAGKGE
Trigger: CTCCCCTTTCCCAGCTTCTCATCTGCCAAGCTTTCC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCATTGTTCCAGGGTCACTaGCACATAGGCCCGCAAGCA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPLFQGH*HIGPQA
Trigger: TGCTTGCGGGCCTATGTGTCAGTGACCCTGGAACAA...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCGCCCTGCCTTGGAGATaGGGGTGGAAACAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLALPWR*GWKQGG
Trigger: GCCGCCTTGTTTCCACCCTCATCTCCAAGGCAGGGC...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGTCAGCTTTAGGATCTTaGCCAGCAAAGGAATGTTTG +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESSALGS*PAKECL
Trigger: CAAACATTCCTTTGCTGGTCAAGATCCTAAAGCTGA...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGTCTTCAGGGGAACTTTaGGAAATGTCCTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CFWTRQQRALGTEVGVESSSGEL*EMSFVP
Trigger: TGGAACAAAGGACATTTCTCAAAGTTCCCCTGAAGA...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR TCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGACCTGCTTCAGCTGCCTaGGTAGCTAGGATTATAGGC +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRPASAA*VARIIG
Trigger: GCCTATAATCCTAGCTACTCAGGCAGCTGAAGCAGG...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGAGCTGGCTCACCACTTaGATCACATACCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKSWLTT*ITYHSP
Trigger: TGGACTGTGGTATGTGATGCAAGTGGTGAGCCAGCT...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGAGGTTGAGAAGAAAGTaGATCTCAAGGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGRLRRK*ISRPVR
Trigger: CCTCACTGGCCTTGAGATGCACTTTCTTCTCAACCT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAATAAACTATGGAGTCTaGAAGGCCGAGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVINYGV*KAEGGF
Trigger: AAAACCACCCTCGGCCTTGCAGACTCCATAGTTTAT...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGACATCTCCAGGTGCTTTaGCACAATCAGGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRHLQVL*HNQGRS
Trigger: ACTCCTGCCCTGATTGTGGCAAAGCACCTGGAGATG...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGGGATTACATGGGTGTaGCACCACACCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMGITWV*HHTWPS
Trigger: GGAGGGCCAGGTGTGGTGCCACACCCATGTAATCCC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTCCATGCATGTCAAAATaGATCCTGCCATTTTTCACA +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTPCMSK*ILPFFT
Trigger: TGTGAAAAATGGCAGGATTCATTTTGACATGCATGG...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGAGGAAAGGAGACACTaGGAGGTTGAGGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFEERRH*EVEVCK
Trigger: CTTGCAGACCTCAACCTCTCAGTGTCTCCTTTCCTC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGAACTGGGCTGCTAGGTaGATTAAGCCATCAAGGATG +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKNWAAR*IKPSRM
Trigger: CATCCTTGATGGCTTAATTCACCTAGCAGCCCAGTT...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAGCATCTCAAGGCCAGTaGGGGCTGCAAAATGGTTTG +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPASQGQ*GLQNGL
Trigger: CAAACCATTTTGCAGCCCTCACTGGCCTTGAGATGC...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAGGTTATGTCATGCAATaGAGCAAAAACAAGACGACC +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVGYVMQ*SKNKTT
Trigger: GGTCGTCTTGTTTTTGCTTCATTGCATGACATAACC...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCGGCATGGGACGACTGTaGACATGCCCGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLGMGRL*TCPQAS
Trigger: AGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCC...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTACAAGCTTCTTTTCCTTaGCACGATTTGTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVQASFP*HDLSST
Trigger: TGTAGAGGACAAATCGTGTCAAGGAAAAGAAGCTTG...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAAGGTTCATAGTTCACTaGAATGGGGTTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRRFIVH*NGVGGK
Trigger: CTTGCCCCCAACCCCATTTCAGTGAACTATGAACCT...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGTCCCTGTGGCAGGGATaGGTCAGCGGAGCTGACGAG +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWSLWQG*VSGADE
Trigger: CTCGTCAGCTCCGCTGACTCATCCCTGCCACAGGGA...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCATGGAGGACACCATGTaGTTTGGGAAGTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVMEDTM*FGKFFT
Trigger: AGTGAAAAACTTCCCAAAGCACATGGTGTCCTCCAT...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTTGCAGCAGCCAGGGCTaGTGCACTTTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFCSSQG*CTFILE
Trigger: TTCCAGAATGAAAGTGCAGCAGCCCTGGCTGCTGCA...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGACACTGAGCGTCTCTaGCTGCTGCATCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFDTERL*LLHLTE
Trigger: CTCAGTAAGATGCAGCAGGCAGAGACGCTCAGTGTC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAGTGATATCGGTTCACTaGAACCTCTGCTTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKVISVH*NLCFPS
Trigger: ACTTGGGAAGCAGAGGTTGCAGTGAACCGATATCAC...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTAGTCCCAGTGGGCAATaGCTGACACTGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTSPSGQ*LTLHRP
Trigger: TGGCCTATGCAGTGTCAGCCATTGCCCACTGGGACT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAATTGTCAGGATATCAATaGCTGTCGCACAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKLSGYQ*LSHKAL
Trigger: CAGGGCTTTGTGCGACAGCCATTGATATCCTGACAA...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTTGCTCATCATGCCACTaGGCTACTTGTTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFCSSCH*ATCSRV
Trigger: GACCCTGGAACAAGTAGCCCAGTGGCATGATGAGCA...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCTCTGCAGGAGTGGCCTaGCGAGCGGCATTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPSAGVA*RAALAS
Trigger: GGAGGCTAATGCCGCTCGCCAGGCCACTCCTGCAGA...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCATGTCAGATAAAAGTTaGCCAGCTAAACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVMSDKS*PAKPSS
Trigger: GGAGGATGGTTTAGCTGGCCAACTTTTATCTGACAT...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTGTGAGGGCTGCAAAATaGTTTGCGGCTGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTVRAAK*FAAGPE
Trigger: TTCTGGGCCAGCCGCAAACCATTTTGCAGCCCTCAC...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAAGCCTCCCGAGTAGCTaGGATTACAAGTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPSLPSS*DYKCMP
Trigger: TGGCATGCACTTGTAATCCCAGCTACTCGGGAGGCT...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTCACACCTGGCCCTCCTaGCATAATAAACTTTATTTT +
Preference number: 4 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTHTWPS*HNKLYF
Trigger: AAAATAAAGTTTATTATGCCAGGAGGGCCAGGTGTG...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAGTGGAAGGCAAGAGCTaGGCCTACCACCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPVEGKS*AYHLFL
Trigger: TAGAAACAGGTGGTAGGCCCAGCTCTTGCCTTCCAC...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTCTCCCCCTCTGGTCTTaGCTTCCTCTTTTGGAAACG +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFLPLWS*LPLLET
Trigger: CGTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAG...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 72 bp TTCTGCAAACTTGAAGGAACCACTCCCCCTCTGGTCTaGGCTTCCTCTTTTGGAAACGGACTACCGTTCGGT +
Preference number: 4 (lower is better)
Translates to: FCKLEGTTPPLV*ASSFGNGLPFG
Trigger: ACCGAACGGTAGTCCGTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGTCAGTTCTGCCAAGTaGACACCAAATTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFVSSAK*TPNSSV
Trigger: GACGGAGGAATTTGGTGTTCACTTGGCAGAACTGAC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGCACGTGGGTACTCTCTaGGACTTTCAGTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKHVGTL*DFQLVT
Trigger: TGTGACCAACTGAAAGTCTCAGAGAGTACCCACGTG...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCTACATGTTGCAAATTTaGGGGCTACAACTTAAGCAC +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVYMLQI*GLQLKH
Trigger: GTGCTTAAGTTGTAGCCCTCAAATTTGCAACATGTA...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCGGACTCAAGTTCTCCTaGGGCAGGATGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLGLKFS*GRMPSP
Trigger: AGGACTGGGCATCCTGCCTCAGGAGAACTTGAGTCC...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCATCACTGGACCATCCTTaGACTTCCCAAAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPSLDHP*TSQSHV
Trigger: GACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGA...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGATCCACCAGTGCTCAGTaGCACTGTTTTTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRSTSAQ*HCFWFA
Trigger: AGCAAACCAAAAACAGTGGCACTGAGCACTGGTGGA...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGAAATCCGACTGGCACTaGCTTGAGATAAACTATGGA +
Preference number: 4 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGKSDWH*LEINYG
Trigger: TCCATAGTTTATCTCAAGGCAGTGCCAGTCGGATTT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCCCTTGGTGCCCCAGCTaGTGTTTACCAGTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTPWCPS*CLPVRR
Trigger: TCTCCTGACTGGTAAACAGCAGCTGGGGCACCAAGG...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTACCTTCTAGTCACATTTaGATCAACACTGCAACACTT +
Preference number: 4 (lower is better)
Translates to: STCTSRGPRPSALTHSRVPSSHI*INTATL
Trigger: AAGTGTTGCAGTGTTGATGCAAATGTGACTAGAAGG...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTTTTTCCCACCTGGACTaGTGTAGCTGCTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTFSHLD*CSCCQT
Trigger: AGTCTGGCAGCAGCTACAGCAGTCCAGGTGGGAAAA...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAGCAGAATCTGCTGCATaGAGGACACCATGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPAESAA*RTPCAL
Trigger: CAAAGCACATGGTGTCCTCCATGCAGCAGATTCTGC...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGCTGCACTTTCATTCTaGAAATCTGTGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFAALSF*KSVATA
Trigger: GGCTGTGGCCACAGATTTCCAGAATGAAAGTGCAGC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGTGCTCTGCCACTTACTaGTTCTGCAAACTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKCSATY*FCKLEG
Trigger: TCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCA...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCTCATTGTCATTAAGGTaGCCTGCAGATCAATCTGAT +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVSLSLR*PADQSD
Trigger: ATCAGATTGATCTGCAGGCCACCTTAATGACAATGA...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456707.1
3UTR CAA 72 bp GGTCTGCACAGGTTCTGCTCATACATGCTCTTAAGCTaGCAAATTCAGAAGTGTTGGTCTGTGTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLHRFCSYMLLS*QIQKCWSVCPR
Trigger: CCTGGGGCACACAGACCAACACTTCTGAATTTGCAAGCTTAAGAGCATGTATGAGCAGAACCTGTGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGTTGTTTCAAGATGACTaGTGCCAGCTGACGGATTGC +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKLFQDD*CQLTDC
Trigger: GCAATCCGTCAGCTGGCATCAGTCATCTTGAAACAA...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGATTGGGCACACCAGTaGGTCTCCACATATTGTTTC +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFDWAHQ*VSTYCF
Trigger: GAAACAATATGTGGAGACTCACTGGTGTGCCCAATC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAAGGCCTAAATTTCTCTaGTTGGGCACACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPRPKFL*LGTPVS
Trigger: ACTCACTGGTGTGCCCAATCAGAGAAATTTAGGCCT...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCGGGGGCTGTGTCTCGTaGAGACCACTAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPGGCVS*RPLTVA
Trigger: GGCAACAGTTAGTGGTCTTCACGAGACACAGCCCCC...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGTCATTAAGGTGGCCTaGAAACATTATGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRVIKVA*KHYVAG
Trigger: CCCTGCTACATAATGTTTTCAGGCCACCTTAATGAC...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCATCTTGACTCCACTCTaGAGGAGTGGCCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFILTPL*RSGLAS
Trigger: GCTCGCCAGGCCACTCCTGCAGAGTGGAGTCAAGAT...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGAAATCTGTGAGATATaGCTGCAGATCAATCTGATA +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVEICEI*LQINLI
Trigger: TATCAGATTGATCTGCAGGCATATCTCACAGATTTC...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAAGGTTGAGAAGAAAGTaGATCTCAAGGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPRLRRK*ISRPVR
Trigger: CCTCACTGGCCTTGAGATGCACTTTCTTCTCAACCT...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAGGCCAAGGGTCAAGATaGCACTTTAGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPGQGSR*HFRLRR
Trigger: TCTTCTCAACCTAAAGTGGCATCTTGACCCTTGGCC...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCTGTCATCAGTGTCACTaGCGAGGCCAAGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFCHQCH*RGQGPR
Trigger: CCTTGGCCCTTGGCCTCGGCAGTGACACTGATGACA...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGTATTGTTAGCTCCTTaGAAGTGTTCAAGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRVLLAP*KCSRVA
Trigger: GGCAACCCTTGAACACTTGCAAGGAGCTAACAATAC...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTAAGTGTTGGTCTGTGTaGCCCAGGTACAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTKCWSV*PRYKRP
Trigger: AGGTCTCTTGTACCTGGGGCACACAGACCAACACTT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGATTGCCAGTGCCCCCTaGGGATCTACAGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMIASAP*GSTVSS
Trigger: AGAACTGACTGTAGATCCCCAGGGGGCACTGGCAAT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGTCAGGCCAGTCCCAGTaGGCAATGGCTGACACTGCA +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWSGQSQ*AMADTA
Trigger: TGCAGTGTCAGCCATTGCCCACTGGGACTGGCCTGA...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCAGCAGGTTGAAGAGTTaGGGCCAAGCTTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLSRLKS*GQASGQ
Trigger: CTGGCCTGAAGCTTGGCCCCAACTCTTCAACCTGCT...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTAGCATGCATGCCTCATaGATCTTCCACCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTSMHAS*IFHQCS
Trigger: TGAGCACTGGTGGAAGATCCATGAGGCATGCATGCT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGAGCCATCAAGGATGCTaGGGAGGAAGGGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWSHQGC*GGRAGA
Trigger: TGCTCCAGCCCTTCCTCCCCAGCATCCTTGATGGCT...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTCAGCCTCATTTGCATTaGGCCCTGACAGGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTQPHLH*ALTGFN
Trigger: ATTGAAGCCTGTCAGGGCCCAATGCAAATGAGGCTG...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTAGGAATCTTGTCTGCTaGGGCCTGCATTATGCTGAC +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTRNLVC*GLHYAD
Trigger: GTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGTTTGCCAGTAGGTCCTaGGAGGCTACACAGGAACTC +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMFASRS*EATQEL
Trigger: GAGTTCCTGTGTAGCCTCCCAGGACCTACTGGCAAA...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGATGTCAGATAAAAGTTaGCCAGCTAAACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKMSDKS*PAKPSS
Trigger: GGAGGATGGTTTAGCTGGCCAACTTTTATCTGACAT...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTCAGGCTGTAGTGCAATaGTGCGATCTTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTQAVVQ*CDLGLL
Trigger: CAGTAAGCCAAGATCGCACCATTGCACTACAGCCTG...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTAGCACCAAATCCGACTaGCACTGCCTTGAGATAAAC +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFSTKSD*HCLEIN
Trigger: GTTTATCTCAAGGCAGTGCCAGTCGGATTTGGTGCT...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCTATTGCGATTACTTTTaGGTGCTTTGCTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVYCDYF*VLCYWN
Trigger: ATTCCAGTAGCAAAGCACCCAAAAGTAATCGCAATA...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCCATAGCTCCCAGCTATaGGTGGGGGATAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLHSSQL*VGDRMG
Trigger: TCCCATCCTATCCCCCACCCATAGCTGGGAGCTATG...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTCACCCAACAGGCAAGTaGCAAAGCCAGGGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTHPTGK*QSQGSN
Trigger: ATTTGAACCCTGGCTTTGCCACTTGCCTGTTGGGTG...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGTCTGGGACAGCTCCTTaGAGATGTCCTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWSGTAP*RCPEPV
Trigger: CACTGGCTCAGGACATCTTCAAGGAGCTGTCCCAGA...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGATCTTCAGGGGAACTTTaGGAAATGTCCTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRSSGEL*EMSFVP
Trigger: TGGAACAAAGGACATTTCTCAAAGTTCCCCTGAAGA...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR TCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGCTTGCCTGTTCCTCCTaGGAACCCAGAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLLACSS*EPRAAV
Trigger: CACTGCTGCTCTGGGTTCTCAGGAGGAACAGGCAAG...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTTCATCTTTCTCCCCATaGTTTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFSSFSP*FVCVCV
Trigger: CACACACACACACACAAATCATGGGGAGAAAGATGA...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCATCAATGCTACTGGCATaGGACCATTCTTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPSMLLA*DHSFVP
Trigger: TGGCACAAAAGAATGGTCTCATGCCAGTAGCATTGA...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGCCCATCTGTATTTCTaGCCCCCTACTAGACTAGCT +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMAHLYF*PPTRLA
Trigger: AGCTAGTCTAGTAGGGGGTCAGAAATACAGATGGGC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGTGGGGAATTTTCCCGTaGCTGCTAACTAAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKWGIFP*LLTKGL
Trigger: TAGACCTTTAGTTAGCAGTCACGGGAAAATTCCCCA...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCGAGGGAACCAAGGCTTaGAGGAAACGTCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPEGTKA*RKRHLP
Trigger: CGGCAAGTGACGTTTCCTTCAAGCCTTGGTTCCCTC...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTACAATAGGCAGAATCTaGTGCATGGAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTTIGRI*CMEDTM
Trigger: CATGGTGTCCTCCATGCAGCAGATTCTGCCTATTGT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCTTGTCTGCTGGGGCCTaGATTATGCTGACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLLSAGA*IMLTRV
Trigger: CACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAA...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGTGCAGGAATCTTGTCTaGTGGGGCCTGCATTATGCT +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMCRNLV*WGLHYA
Trigger: AGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCA...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGATCTTGACTCCACTCTaGAGGAGTGGCCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLILTPL*RSGLAS
Trigger: GCTCGCCAGGCCACTCCTGCAGAGTGGAGTCAAGAT...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGGGCTGCAAAATGGTTTaGGGCTGGCCCAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLGCKMV*GWPRRS
Trigger: GCTCCTTCTGGGCCAGCCGCAAACCATTTTGCAGCC...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAAAAGGAAGATCAAATTaGCATCTGTCTGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAKGRSN*HLSGLF
Trigger: AAATAAGCCAGACAGATGGCAATTTGATCTTCCTTT...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCTACCCCACTCTCATCTaGCTGGCAAATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTYPTLI*LANAQE
Trigger: TTCCTGTGCATTTGCCAGGCAGATGAGAGTGGGGTA...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGGCCACTTACTGGTTCTaGAAACTTGAAGGAACCACT +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKATYWF*KLEGTT
Trigger: AGTGGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGC...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTACTAGATATGAGTCCTaGTCTGCCACTTACTGGTTC +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFTRYES*SATYWF
Trigger: GAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGGCATCTCAAGTTAACTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKASQVN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTAACTTGAGATGC...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGCAGTTCAATGCTACTaGCATGAGACCATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRAVQCY*HETILL
Trigger: CAAAAGAATGGTCTCATGCCAGTAGCATTGAACTGC...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCTCCTGGGAGCCCCTTaGTGCCCCAGCTGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQLLGAP*CPSCCL
Trigger: TAAACAGCAGCTGGGGCACCAAGGGGCTCCCAGGAG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTCCTTGAAGATGTCCTaGGCCAGTGAGGCGACGACG +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSSLKMS*ASEATT
Trigger: CGTCGTCGCCTCACTGGCTCAGGACATCTTCAAGGA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGTGGAAAGGCTTAGAATaGAGCTGCTCTTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMWKGLE*SCSCLF
Trigger: GAACAGGCAAGAGCAGCTTCATTCTAAGCCTTTCCA...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCTCCCCCAAATCAGCATaGGAGCAGAAAGGACCCTTG +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFSPKSA*EQKGPL
Trigger: CAAGGGTCCTTTCTGCTCTCATGCTGATTTGGGGGA...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGATGAGTCAGCGGAGCTaGCGAGGGATATTAGTTATG +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMMSQRS*RGILVM
Trigger: CATAACTAATATCCCTCGTCAGCTCCGCTGACTCAT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCTGGATCTTCCACCAGTaGTCAGTGCCACTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTWIFHQ*SVPLFL
Trigger: CAAAAACAGTGGCACTGAGCACTGGTGGAAGATCCA...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGGTGAAGGGTACACTGTaGCACAGCAGGGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWVKGTL*HSRESL
Trigger: CAAGCTTTCCCTGCTGTGGCACAGTGTACCCTTCAC...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCCTGAGCGTCTCTGCCTaGTGCATCTTACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPLSVSA*CILLRM
Trigger: CATCCTCAGTAAGATGCAGCAGGCAGAGACGCTCAG...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTGTCATCAGTGTCACTaGCGAGGCCAAGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSCHQCH*RGQGPR
Trigger: CCTTGGCCCTTGGCCTCGGCAGTGACACTGATGACA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCGAAAGATCAGGACTTTaGCTGCACCCTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTERSGL*LHPFPA
Trigger: AGCTGGAAAAGGGTGCAGCCAAAGTCCTGATCTTTC...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGTCTTCTACAAATTGTTaGGGGTTGGCTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKSSTNC*GLAVHT
Trigger: AGTATGGACAGCCAACCCCCAACAATTTGTAGAAGA...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCCGCCATTCTGCATGGTaGCATTGTCATCTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTRHSAW*HCHLCE
Trigger: TTCACACAGATGACAATGCCACCATGCAGAATGGCG...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCGCATTGATGCCATGCTaGAGCAGCTTACAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFALMPC*SSLQSA
Trigger: GGCACTCTGTAAGCTGCTCCAGCATGGCATCAATGC...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAACTCTGTGGTAATGTGTaGGAGAGGCATATTAAATAT +
Preference number: 4 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKLCGNV*ERHIKY
Trigger: ATATTTAATATGCCTCTCCCACACATTACCACAGAG...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGAGAACCTGGCTGGCATaGGACGACTGTGAACATGCC +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLRTWLA*DDCEHA
Trigger: GGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCT...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAGAAGCTAGTTCTCTTTaGCCAAAGACAGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPEASSL*PKTGDK
Trigger: TTTGTCTCCTGTCTTTGGCCAAAGAGAACTAGCTTC...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGATCTTAGCCTTCCTCTaGCAGAGGACTCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMILAFL*QRTHLS
Trigger: TGACAGATGAGTCCTCTGCCAGAGGAAGGCTAAGAT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 72 bp TCAGCAGTTCAATGCTACTGGCATGAGACCATTCTTTaGTGCCAATATCAGAGGCTGACTTGGCCTTATGCC +
Preference number: 4 (lower is better)
Translates to: SAVQCYWHETIL*CQYQRLTWPYA
Trigger: GGCATAAGGCCAAGTCAGCCTCTGATATTGGCACAAAAGAATGGTCTCATGCCAGTAGCATTGAACTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGGGGATAGGATCCCGGTaGGCGTATCCACTAACGCTT +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQGIGSR*AYPLTL
Trigger: AAGCGTTAGTGGATACGCTCACCGGGATCCTATCCC...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGGGTATCTGGAGGGCCTaGACAAAGGCCTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQGIWRA*TKASVN
Trigger: GTTCACAGAGGCCTTTGTTCAGGCCCTCCAGATACC...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGCCAGCAACAAGTCTTaGGCTGCTATTCTAACAGTA +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMASNKS*AAILTV
Trigger: TACTGTTAGAATAGCAGCTCAAGACTTGTTGCTGGC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCGCATTGTCATCTGTGTaGAGGGTACACTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFALSSV*RVHCAT
Trigger: TGTGGCACAGTGTACCCTTCACACAGATGACAATGC...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCCCTGCTGCATCTTACTaGGGATGGCACGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFPAASY*GWHEES
Trigger: AGATTCTTCGTGCCATCCTCAGTAAGATGCAGCAGG...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGGCATCTCAAGGCCAGTaGGGGCTGCAAAATGGTTTG +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLASQGQ*GLQNGL
Trigger: CAAACCATTTTGCAGCCCTCACTGGCCTTGAGATGC...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR TCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCACTTTAGAGGCTTCCTaGGGGAAAGGGGATAACCTT +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLTLEAS*GKGDNL
Trigger: AAGGTTATCCCCTTTCCCTCAGGAAGCCTCTAAAGT...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGACCACTGTTTTTGGTTTaGTCAGCTTCTTGTAAATGT +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRPLFLV*SASCKC
Trigger: ACATTTACAAGAAGCTGAGCAAACCAAAAACAGTGG...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGAGTCCATTGTGGCCCTaGTCATCATGCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQSPLWP*SSCHWA
Trigger: AGCCCAGTGGCATGATGAGCAGGGCCACAATGGACT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAATCACTCTTATTTAGGTaGTTTTGGGTCATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKSLLFR*FWVICC
Trigger: ACAACAAATGACCCAAAAGCACCTAAATAAGAGTGA...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGCTCAGCCTCCTAAAGTaGTGGGATTACATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWLSLLK*WDYMGV
Trigger: CACACCCATGTAATCCCAGCACTTTAGGAGGCTGAG...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGAAGGTATTGCCACATTaGCCAGACTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMKVLPH*PDWSQT
Trigger: AGTTTGAGACCAGTCTGGGCAATGTGGCAATACCTT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGCAAGTGTTCAAGGGTTaGCTTCTCCATGCAACTTAC +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMQVFKG*LLHATY
Trigger: GTAAGTTGCATGGAGAAGGCAACCCTTGAACACTTG...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGATACTTTTGGGTGCTTTaGTACTGGAATCTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRYFWVL*YWNLGK
Trigger: TTTACCAAGATTCCAGTAGCAAAGCACCCAAAAGTA...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGTTCCTCAGGCAGGGCTaGAGTGCTACAATTCATTCC +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWFLRQG*SATIHS
Trigger: GGAATGAATTGTAGCACTGCAGCCCTGCCTGAGGAA...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGACTAAGGCAAGGAAATaGAAAGAATTCAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: GCSATIHSSELSSQRLTKTKARK*KEFRYV
Trigger: AACATACCTGAATTCTTTGCATTTCCTTGCCTTAGT...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTACCACAGTCCATTGTaGCCCTGCTCATCATGCCAC +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLYHSPL*PCSSCH
Trigger: GTGGCATGATGAGCAGGGCCACAATGGACTGTGGTA...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCCTTTTTAGATGCCGATaGTCTGTAGAACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTLFRCR*SVELAS
Trigger: AGAGGCGAGTTCTACAGACCATCGGCATCTAAAAAG...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCAAAATGGTTTGCGGCTaGCCCAGAAGGAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLKMVCG*PRRSKC
Trigger: ACATTTGCTCCTTCTGGGCCAGCCGCAAACCATTTT...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCAGCCTCCTAAAGTGCTaGGATTACATGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFSLLKC*DYMGVA
Trigger: TGCCACACCCATGTAATCCCAGCACTTTAGGAGGCT...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTGTAAGTGTCATTAGATaGCAAATGTTGACCTGTACC +
Preference number: 4 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFVSVIR*QMLTCT
Trigger: GGTACAGGTCAACATTTGCCATCTAATGACACTTAC...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCAAGGCAAACAGGTGCTaGGACACCTTATACCATGCA +
Preference number: 4 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPKANRC*DTLYHA
Trigger: TGCATGGTATAAGGTGTCTCAGCACCTGTTTGCCTT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGAGAGGAAGCAGGTCTTaGAGGATCCTTCACAATCTG +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWRGSRS*RILHNL
Trigger: CAGATTGTGAAGGATCCTTCAAGACCTGCTTCCTCT...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCTGGTTCTGCAAACTTaGAGGAACCACTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQLVLQT*RNHSPS
Trigger: AGAGGGGGAGTGGTTCCTTCAAGTTTGCAGAACCAG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAACAAGTCTTGAGCTaGTATTCTAACAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPQQVLS*YSNSIG
Trigger: TCCTATACTGTTAGAATAGCAGCTCAAGACTTGTTG...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTGTCGCACAAAGCCCTaGAGGAATCTTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSCRTKP*RNLVCW
Trigger: CCAGCAGACAAGATTCCTGCAGGGCTTTGTGCGACA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCGCTCCCCTTTTTAGATaGCGATGGTCTGTAGAACTC +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFAPLFR*RWSVEL
Trigger: GAGTTCTACAGACCATCGGCATCTAAAAAGGGGAGC...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCCTGGACTGCTGTAGCTaGTGCCAGACTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSLDCCS*CQTAFL
Trigger: AAGGAATGCAGTCTGGCAGCAGCTACAGCAGTCCAG...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCGCGATTACTTTTGGGTaGTTTGCTACTGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTAITFG*FATGIL
Trigger: CAAGATTCCAGTAGCAAAGCACCCAAAAGTAATCGC...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGTTCAAGCAATTCTCCTaGTTCAGCTGCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWFKQFS*FSCLSS
Trigger: GCTACTCAGGCAGCTGAAGCAGGAGAATTGCTTGAA...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCTGCATAGGCCACACTaGAGCGCACTTTGCTTATCG +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQLHRPH*SALCLS
Trigger: CGATAAGCAAAGTGCGCTCCAGTGTGGCCTATGCAG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGACCCACTGTCAGATGTaGGGCCATCTGGTATCTGGA +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQTHCQM*GHLVSG
Trigger: TCCAGATACCAGATGGCCCCACATCTGACAGTGGGT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCAAAATGGTTTGCGGCTaGCCCAGAAGGAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFKMVCG*PRRSKC
Trigger: ACATTTGCTCCTTCTGGGCCAGCCGCAAACCATTTT...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCCACTCTCATCTGCCTaGCAAATGCACAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQPLSSA*QMHRKG
Trigger: GCCTTTCCTGTGCATTTGCCAGGCAGATGAGAGTGG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGATCACGAAAAGGTCCTaGGGTCTCACACAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWITKRS*GLTQCK
Trigger: TTTGCACTGTGTGAGACCCCAGGACCTTTTCGTGAT...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 72 bp AAAGGGGAACACAGGTTTCATCTTTCTCCCCATGATTaGTGTGTGTGTGTGTGTGTGTGTGTGATTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KGEHRFHLSPHD*CVCVCVCVIES
Trigger: AGACTCAATCACACACACACACACACACACACACAAATCATGGGGAGAAAGATGAAACCTGTGTTCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 72 bp CGTTTAAATACTCCAGAAGCAGGTATTGTTAGCTCCTaGCAAGTGTTCAAGGGTTGCCTTCTCCATGCAACT +
Preference number: 4 (lower is better)
Translates to: RLNTPEAGIVSS*QVFKGCLLHAT
Trigger: AGTTGCATGGAGAAGGCAACCCTTGAACACTTGCAAGGAGCTAACAATACCTGCTTCTGGAGTATTTAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGACATCTCTGGGAGAATaGCAGGAGCAACAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQTSLGE*QEQQVA
Trigger: TGCCACTTGTTGCTCCTGTCATTCTCCCAGAGATGT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCGTGAGTCAGGAAGAATaGGCCAAACATAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSVSQEE*AKHSSQ
Trigger: CTGGGAGCTATGTTTGGCTCATTCTTCCTGACTCAC...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGAAGGCCTCTGTGAACTaGTGTACCACGGGAAAGATC +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQKASVN*CTTGKI
Trigger: GATCTTTCCCGTGGTACAGCAGTTCACAGAGGCCTT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCGCAACAAGTACAAGCTaGTTGGACTATAATCACACA +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTATSTS*LDYNHT
Trigger: TGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGC...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTATCAGAGGCTGACTTaGCCTTATGCCTTTAGCACC +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLYQRLT*PYAFST
Trigger: GGTGCTAAAGGCATAAGGCCAAGTCAGCCTCTGATA...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTTTCTCATCAACAGAATaGGAATATCCACTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTFSSTE*EYPLCE
Trigger: TTCACAGAGTGGATATTCCCATTCTGTTGATGAGAA...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCATGTAAGGTTAGTAGGTaGTCTGAGGTAAAAGTATTT +
Preference number: 4 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPCKVSR*SEVKVF
Trigger: AAATACTTTTACCTCAGACCACCTACTAACCTTACA...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGCCGGCCTACAAAAATTaGAATTTTATTGCGATTACT +
Preference number: 4 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKPAYKN*NFIAIT
Trigger: AGTAATCGCAATAAAATTCCAATTTTTGTAGGCCGG...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGGTTTGTTGTTATTATaGTTTGTTCCCCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMGLLLL*FVPLSR
Trigger: TCTGGAGAGGGGAACAAACCATAATAACAACAAACC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGTTTCCATGCTTGCTGTaGATTCGGGGTCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQFPCLL*IRGLLY
Trigger: GTACAGTAGACCCCGAATTCACAGCAAGCATGGAAA...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp ACACCGATAGTTTATGTCACACAGCTAACCACAGAAAAACTGCTTAGTAGGTGGGATGCCACTTTAGGTTaGGAAGAAAGTGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: TPIVYVTQLTTEKLLSRWDATLG*EESASQ
Trigger: TTGAGATGCACTTTCTTCTCAACCTAAAGTGGCATC...CCACCTACTAAGCAGTTTTTCTGTGGTTAGCTGTGTGACATAAACTATCGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCCATAATGATCTCTCATaGGGATTCCTATCTGAACAC +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLHNDLS*GFLSEH
Trigger: GTGTTCAGATAGGAATCCTCATGAGAGATCATTATG...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCCTAAGACACAAAACCTaGTCACTTCCCTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLLRHKT*SLPCLV
Trigger: AACTAAACAGGGAAGTGATCAGGTTTTGTGTCTTAG...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCATCTACAGTCAGTTCTaGCAAGTGAACACCAAATTC +
Preference number: 4 (lower is better)
Translates to: YVFHWTILELPKAMSCFLIYSQF*QVNTKF
Trigger: GAATTTGGTGTTCACTTGGCAGAACTGACTGTAGAT...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCCTACTGTACAAACGATaGACAGGGTCTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSLLYKR*TGSPSP
Trigger: TGGTGATGGAGACCCTGTGCATCGTTTGTACAGTAG...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTCTGCATTGATGCCATaGTGGAGCAGCTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSSALMP*WSSLQS
Trigger: ACTCTGTAAGCTGCTCCAGCATGGCATCAATGCAGA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGTCTATCATCTCCAGGTaGTTTGCCACAATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQSIISR*FATIRA
Trigger: TGCCCTGATTGTGGCAAAGCACCTGGAGATGATAGA...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGATGGCACGAAGAATCTaGTCTAGATTCTCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQMARRI*SRFSPS
Trigger: ACTCGGGGAGAATCTAGACCAGATTCTTCGTGCCAT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGTTCCAATCTCAGTCATaGAGGTTGAACACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQFQSQS*RLNTGD
Trigger: GTCCCCAGTGTTCAACCTCCATGACTGAGATTGGAA...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTAGAGTAGCCAGAAATTaGCCTTTTATTTCCTACTTA +
Preference number: 4 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTRVARN*PFISYL
Trigger: TAAGTAGGAAATAAAAGGCCAATTTCTGGCTACTCT...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGGATGCCACTTTAGGTTaGGAAGAAAGTGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLDATLG*EESASQ
Trigger: TTGAGATGCACTTTCTTCTCAACCTAAAGTGGCATC...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR TCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCATGAGGATTCCTATCTaGACACATCAGAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPMRIPI*THQKSY
Trigger: ATAGGACTTCTGATGTGTTCAGATAGGAATCCTCAT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTAGATGGCAAATGTTaGCCTGTACCATCCATTAGG +
Preference number: 4 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLLDGKC*PVPSIR
Trigger: CCTAATGGATGGTACAGGTCAACATTTGCCATCTAA...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGTTTGCTTTCCATGCTTaGTGTGAATTCGGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQFAFHA*CEFGVY
Trigger: GTAGACCCCGAATTCACAGCAAGCATGGAAAGCAAA...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCATCTGCCTGGCAAATaGACAGGAAAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQHLPGK*TGKAKQ
Trigger: TTGTTTTGCCTTTCCTGTGCATTTGCCAGGCAGATG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp ACTAGATATGAGTCCTGCTCTGCCACTTACTGGTTCTGCAAACTTGAAGGAACCTTCCTACAGCACATTTaGTACCATATCATGTATTCT +
Preference number: 4 (lower is better)
Translates to: TRYESCSATYWFCKLEGTFLQHI*YHIMYS
Trigger: AGAATACATGATATGGTAGCAAATGTGCTGTAGGAA...GGTTCCTTCAAGTTTGCAGAACCAGTAAGTGGCAGAGCAGGACTCATATCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCCACAATAACCCCAGATaGCTCTCACTGCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSHNNPR*LSLQKF
Trigger: GAATTTCTGCAGTGAGAGCCATCTGGGGTTATTGTG...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGATTACACTTGTTCTGTaGATTAGGAAATGGAGACAT +
Preference number: 4 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMITLVL*IRKWRH
Trigger: ATGTCTCCATTTCCTAATCCACAGAACAAGTGTAAT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTATATAGGAACAGCTTaGGGGGAAGGGTTATGTCAT +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSYIGTA*GEGLCH
Trigger: ATGACATAACCCTTCCCCTCAAGCTGTTCCTATATA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCCCGGATAACAATTTTTaGCCTTTCTGTAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSPDNNF*PFCSFR
Trigger: CCTGAAACTACAGAAAGGGCAAAAATTGTTATCCGG...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCATGTTACAGATCATATaGGCACAAGTGGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPMLQII*AQVVKI
Trigger: GATTTTTACCACTTGTGCCCATATGATCTGTAACAT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCAAGTACAAGCTGCTTaGACTATAATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQQVQAA*TIITHL
Trigger: CAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR TCA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCGTCTTTAAGTCCTACTaGCTTTATCTTGTCAACATC +
Preference number: 4 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSVFKSY*LYLVNI
Trigger: GATGTTGACAAGATAAAGTCAGTAGGACTTAAAGAC...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGATTTCAGGCTATGTTTaGCAAGACACACTAGAATGT +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQISGYV*QDTLEC
Trigger: ACATTCTAGTGTGTCTTGGCAAACATAGCCTGAAAT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR GCA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCATTTGCATCAACACTaGAACACTTTTCTAAGACAC +
Preference number: 4 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQHLHQH*NTFLRH
Trigger: GTGTCTTAGAAAAGTGTTGCAGTGTTGATGCAAATG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
3UTR CAA 72 bp AACATTTTAAGACAATTCATTCCACAGCTCTCACTTTaGGAAAATCCTTACTTGTCAGTCTTTAAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: NILRQFIPQLSL*ENPYLSVFKSY
Trigger: GTAGGACTTAAAGACTGACAAGTAAGGATTTTCCAAAAGTGAGAGCTGTGGAATGAATTGTCTTAAAATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp GTGGCCGCCTTCCGCTCGGCTCAGTGCCCGCCACATGCCCAGGAGTaGGTCTGGATCCTTGAGGGGCGCCCTTCGCAGGTGGACAGTGCT +
Preference number: 5 (lower is better)
Translates to: VAAFRSAQCPPHAQE*VWILEGRPSQVDSA
Trigger: AGCACTGTCCACCTGCGAAGGGCGCCCCTCAAGGATCCAGACGCACTCCTGGGCATGTGGCGGGCACTGAGCCGAGCGGAAGGCGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464348.5
CDS TCA 90 bp CTCGGCTCAGTGCCCGCCACATGCCCAGGAGTGCGTCTGGATCCTTaGGGGGCGCCCTTCGCAGGTGGACAGTGCTTACGCTATACCTCC +
Preference number: 5 (lower is better)
Translates to: LGSVPATCPGVRLDP*GAPFAGGQCLRYTS
Trigger: GGAGGTATAGCGTAAGCACTGTCCACCTGCGAAGGGCGCCCCTCAAGGATCCAGACGCACTCCTGGGCATGTGGCGGGCACTGAGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464348.5
CDS GCA 90 bp CACCAAATTCTTTTTCCGAGCGTGGCCGCCTTCCGCTCGGCTCAGTaGCCGCCACATGCCCAGGAGTGCGTCTGGATCCTTGAGGGGCGC +
Preference number: 5 (lower is better)
Translates to: HQILFPSVAAFRSAQ*PPHAQECVWILEGR
Trigger: GCGCCCCTCAAGGATCCAGACGCACTCCTGGGCATGTGGCGGGCACTGAGCCGAGCGGAAGGCGGCCACGCTCGGAAAAAGAATTTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464348.5
CDS CCA 90 bp CCCACAAAGGCCGCAGTGAACTCTGAGGTGCGGGGGTCCAGGAGCTaGCTCACCACTTGCATCACATACCACAGTCCATTGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PTKAAVNSEVRGSRS*LTTCITYHSPLWPC
Trigger: GCAGGGCCACAATGGACTGTGGTATGTGATGCAAGTGGTGAGCCAGCTCCTGGACCCCCGCACCTCAGAGTTCACTGCGGCCTTTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 90 bp GTGGCCCTGCTCATCATGCCACTGGGCTACTTGTTCCAGGGTCACTaGCACATAGGCCCGCAAGCACTCTCCGCCATTCTGCATGGTGGC +
Preference number: 5 (lower is better)
Translates to: VALLIMPLGYLFQGH*HIGPQALSAILHGG
Trigger: GCCACCATGCAGAATGGCGGAGAGTGCTTGCGGGCCTATGTGTCAGTGACCCTGGAACAAGTAGCCCAGTGGCATGATGAGCAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 90 bp GATGAGGGTGGAAACAAGGCGGCCCACAAAGGCCGCAGTGAACTCTaGGGTGCGGGGGTCCAGGAGCTGGCTCACCACTTGCATCACATA +
Preference number: 5 (lower is better)
Translates to: DEGGNKAAHKGRSEL*GAGVQELAHHLHHI
Trigger: TATGTGATGCAAGTGGTGAGCCAGCTCCTGGACCCCCGCACCTCAGAGTTCACTGCGGCCTTTGTGGGCCGCCTTGTTTCCACCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 90 bp CTTCAGCAGCCGCCCGCACCTCCTGTACTGGGGATAGGATCCCGGTaGGCGTATCCACTAACGCTTCCTTTAATCCTTGTGCCACTGGAC +
Preference number: 5 (lower is better)
Translates to: LQQPPAPPVLGIGSR*AYPLTLPLILVPLD
Trigger: GTCCAGTGGCACAAGGATTAAAGGAAGCGTTAGTGGATACGCTCACCGGGATCCTATCCCCAGTACAGGAGGTGCGGGCGGCTGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000464348.5
CDS-3UTR CAA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTCTCCATCACCAGGTaGAGGACCTCTGAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTVSITR*RTSELN
Trigger: GTTCAGCTCAGAGGTCCTCAACCTGGTGATGGAGAC...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGGAATCAGCCTCATTaGCATTGGGCCCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAGNQPH*HWALTG
Trigger: GCCTGTCAGGGCCCAATGCAAATGAGGCTGATTCCC...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTAAGCCCTGCAGGAATCTaGTCTGCTGGGGCCTGCATT +
Preference number: 5 (lower is better)
Translates to: STCTSRGPRPSALTHSRVSPAGI*SAGACI
Trigger: AATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCT...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGCACAGCAGGGAAAGCTaGGCAGATGAGAAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: CFWTRQQRALGTEVGVESHSRES*ADEKLG
Trigger: TCCCAGCTTCTCATCTGCCAAGCTTTCCCTGCTGTG...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp CTCCTGGTCCTCCCACATATCATTGGAGTCATCTTGACTCCACTCTaGAGGAGTGGCCTGGCGAGCGGCATTAGCCTCCATGACGTTGGA +
Preference number: 5 (lower is better)
Translates to: LLVLPHIIGVILTPL*RSGLASGISLHDVG
Trigger: TCCAACGTCATGGAGGCTAATGCCGCTCGCCAGGCCACTCCTGCAGAGTGGAGTCAAGATGACTCCAATGATATGTGGGAGGACCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CAA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAGGGCTGCAAAATGGTTaGCGGCTGGCCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKGLQNG*RLAQKE
Trigger: CTCCTTCTGGGCCAGCCGCAAACCATTTTGCAGCCC...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 90 bp ATGTGGGGCCATCTGGTATCTGGAGGGCCTGAACAAAGGCCTCTGTaGACTGCTGTACCACGGGAAAGATCAGGACTTTGGCTGCACCCT +
Preference number: 5 (lower is better)
Translates to: MWGHLVSGGPEQRPL*TAVPRERSGLWLHP
Trigger: AGGGTGCAGCCAAAGTCCTGATCTTTCCCGTGGTACAGCAGTTCACAGAGGCCTTTGTTCAGGCCCTCCAGATACCAGATGGCCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCAATGCCAGCTGACGGATaGCCAGTGCCCCCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPMPADG*PVPPGD
Trigger: ATCCCCAGGGGGCACTGGCAATCCGTCAGCTGGCAT...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp ATGGCTGTCGCACAAAGCCCTGCAGGAATCTTGTCTGCTGGGGCCTaGATTATGCTGACCAGAGTGGGAATCAGCCTCATTTGCATTGGG +
Preference number: 5 (lower is better)
Translates to: MAVAQSPAGILSAGA*IMLTRVGISLICIG
Trigger: CCCAATGCAAATGAGGCTGATTCCCACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCTTTGTGCGACAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp GCCATTCTGCATGGTGGCATTGTCATCTGTGTGAAGGGTACACTGTaGCACAGCAGGGAAAGCTTGGCAGATGAGAAGCTGGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: AILHGGIVICVKGTL*HSRESLADEKLGKG
Trigger: CCCCTTTCCCAGCTTCTCATCTGCCAAGCTTTCCCTGCTGTGGCACAGTGTACCCTTCACACAGATGACAATGCCACCATGCAGAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 90 bp TTTAAGTCTCCGCTCACCAACATCTCCATGAGCAGGTTGAAGAGTTaGGGCCAAGCTTCAGGCCAGTCCCAGTGGGCAATGGCTGACACT +
Preference number: 5 (lower is better)
Translates to: FKSPLTNISMSRLKS*GQASGQSQWAMADT
Trigger: AGTGTCAGCCATTGCCCACTGGGACTGGCCTGAAGCTTGGCCCCAACTCTTCAACCTGCTCATGGAGATGTTGGTGAGCGGAGACTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGAACTCTAGAGCAGGTTaGCCAGTAGGTCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: GCSATIHSSELSSQRLTKNSRAG*PVGPGR
Trigger: CCTCCCAGGACCTACTGGCAAACCTGCTCTAGAGTT...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTAGAACTCGCCTCTCATaGTCATTAAGGTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTRTRLS*SLRWPE
Trigger: TTCAGGCCACCTTAATGACAATGAGAGGCGAGTTCT...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGTCATCTCCAGGTGCTTaGCCACAATCAGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GCSATIHSSELSSQRLTKSSPGA*PQSGQE
Trigger: CTCCTGCCCTGATTGTGGCAAAGCACCTGGAGATGA...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTATCTTGGCTTCCTCTTTaGGAAACGGACTACCGTTCG +
Preference number: 5 (lower is better)
Translates to: STCTSRGPRPSALTHSRVSWLPL*ETDYRS
Trigger: CGAACGGTAGTCCGTTTCCAAAAGAGGAAGCCAAGA...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCAGAACTCGCCTCTCATaGTCATTAAGGTGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVRTRLS*SLRWPA
Trigger: TGCAGGCCACCTTAATGACAATGAGAGGCGAGTTCT...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456707.1
CDS GCA 90 bp CAGGATATCAATGGCTGTCGCACAAAGCCCTGCAGGAATCTTGTCTaGTGGGGCCTGCATTATGCTGACCAGAGTGGGAATCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: QDINGCRTKPCRNLV*WGLHYADQSGNQPH
Trigger: ATGAGGCTGATTCCCACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCTTTGTGCGACAGCCATTGATATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAGGAAAGATCAGGACTTaGGCTGCACCCTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKGKIRT*AAPFSS
Trigger: GCTGGAAAAGGGTGCAGCCAAAGTCCTGATCTTTCC...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGGGAGACACTGAGAGGTaGAGGTCTGCAAGGATGACA +
Preference number: 5 (lower is better)
Translates to: GCSATIHSSELSSQRLTKGDTER*RSARMT
Trigger: TGTCATCCTTGCAGACCTCAACCTCTCAGTGTCTCC...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGGAAAGGGGAGGCTTaGTATTTCGTACTACTGTTG +
Preference number: 5 (lower is better)
Translates to: KQLASEPGWHGTTVNMPAGKGEA*YFVLLL
Trigger: CAACAGTAGTACGAAATACAAAGCCTCCCCTTTCCC...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCATCATTGGAGTCATCTaGACTCCACTCTGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVIIGVI*TPLCRS
Trigger: ACTCCTGCAGAGTGGAGTCAAGATGACTCCAATGAT...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS CCA 90 bp ATGAGCCTTAGTTGGTTCTCATCTGTCAGCACACGCATGGCTCCATaGACGGCATTTAAGTCTCCGCTCACCAACATCTCCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: MSLSWFSSVSTRMAP*TAFKSPLTNISMSR
Trigger: CCTGCTCATGGAGATGTTGGTGAGCGGAGACTTAAATGCCGTCCATGGAGCCATGCGTGTGCTGACAGATGAGAACCAACTAAGGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479374.1
CDS-3UTR CAA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAATCTGCAAGGATGACATaGGTCAGGAACCCATGCATG +
Preference number: 5 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKSARMT*VRNPCM
Trigger: CATGCATGGGTTCCTGACCAATGTCATCCTTGCAGA...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGGTGAAGGGGCAGATTTaGCTTTCCATGCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: GCSATIHSSELSSQRLTKVKGQI*LSMLAV
Trigger: CACAGCAAGCATGGAAAGCAAAATCTGCCCCTTCAC...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGGAGCTGGCTCACCACTaGCATCACATACCACAGTCC +
Preference number: 5 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKELAHH*HHIPQS
Trigger: GGACTGTGGTATGTGATGCAAGTGGTGAGCCAGCTC...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCGAGATGCCACTTTAGGTaGAGAAGAAAGTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: CFWTRQQRALGTEVGVESRCHFR*RRKCIS
Trigger: TGAGATGCACTTTCTTCTCAACCTAAAGTGGCATCT...CGACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCAAGGTATTGCCACATaGCCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GCSATIHSSELSSQRLTKQGIAT*PRLVSN
Trigger: GTTTGAGACCAGTCTGGGCAATGTGGCAATACCTTG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGCAGCAGGGGCACAAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTTCAAGCTTCTTTTCCTaGACACGATTTGTCCTCTAC +
Preference number: 5 (lower is better)
Translates to: KQQGHKQLASEPGWHGTTSSFFS*TRFVLY
Trigger: GTAGAGGACAAATCGTGTCAAGGAAAAGAAGCTTGA...AGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTTGTGCCCCTGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACAGCCGAGTACCCTGTTTAGTTATCTaGGGTAGTCTCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: STCTSRGPRPSALTHSRVPCLVI*GSLPFS
Trigger: AGAGAATGGGAGACTACCCAAGATAACTAAACAGGG...TACTCGGCTGTGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAGCAAATTCAGAAGTGTaGGTCTGTGTGCCCCAGGTA +
Preference number: 5 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKANSEV*VCVPQV
Trigger: TACCTGGGGCACACAGACCAACACTTCTGAATTTGC...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 90 bp CTGTGTGAAGGGTACACTGTGCCACAGCAGGGAAAGCTTGGCAGATaGGAAGCTGGGAAAGGGGAGGCTTTGTATTTCGTACTACTGTTG +
Preference number: 5 (lower is better)
Translates to: LCEGYTVPQQGKLGR*EAGKGEALYFVLLL
Trigger: CAACAGTAGTACGAAATACAAAGCCTCCCCTTTCCCAGCTTCTCATCTGCCAAGCTTTCCCTGCTGTGGCACAGTGTACCCTTCACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp AACACCATGATCAGGGACTGCATGACACTGAGCGTCTCTGCCTGCTaGATCTTACTGAGGATGGCACGAAGAATCTGGTCTAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: NTMIRDCMTLSVSAC*ILLRMARRIWSRFS
Trigger: GGAGAATCTAGACCAGATTCTTCGTGCCATCCTCAGTAAGATGCAGCAGGCAGAGACGCTCAGTGTCATGCAGTCCCTGATCATGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 90 bp TCTGTTACTTCACGAGTGAATTCTGTCAGCACACGCATGGCTCCATaGACGGCATTTAAGTCTCCGCTCACCAACATCTCCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVTSRVNSVSTRMAP*TAFKSPLTNISMSR
Trigger: CCTGCTCATGGAGATGTTGGTGAGCGGAGACTTAAATGCCGTCCATGGAGCCATGCGTGTGCTGACAGAATTCACTCGTGAAGTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000464348.5
CDS-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGACACTGGAGCGCACTTaGCTTATCGATTCTCTCAAC +
Preference number: 5 (lower is better)
Translates to: GCSATIHSSELSSQRLTKTLERT*LIDSLN
Trigger: GTTGAGAGAATCGATAAGCAAAGTGCGCTCCAGTGT...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTATCTCCATGAGCAGGTaGAAGAGTTGGGGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFISMSR*KSWGQA
Trigger: AGCTTGGCCCCAACTCTTCAACCTGCTCATGGAGAT...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTACATACCACAGTCCATaGTGGCCCTGCTCATCATGC +
Preference number: 5 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFTYHSP*WPCSSC
Trigger: GCATGATGAGCAGGGCCACAATGGACTGTGGTATGT...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCACTCCTGGGAGCCCCTaGGTGCCCCAGCTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPTPGSP*VPQLLF
Trigger: AAACAGCAGCTGGGGCACCAAGGGGCTCCCAGGAGT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp ATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGGGTAGAGTCCCACAGCTCTCACTTTaGGAAAATCCTTACTTGTCA +
Preference number: 5 (lower is better)
Translates to: MFLDSPAEGSRNRGGGRVPQLSL*ENPYLS
Trigger: TGACAAGTAAGGATTTTCCAAAAGTGAGAGCTGTGG...GACTCTACCCCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 90 bp ATGGCTCTCACTGCAGAAATTCGAACTGATGGGGGCTGTGTCTCGTaGAGACCACTAACTGTTGCCTGTAGGAACTGCTGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: MALTAEIRTDGGCVS*RPLTVACRNCWISS
Trigger: TGAACTGATCCAGCAGTTCCTACAGGCAACAGTTAGTGGTCTTCACGAGACACAGCCCCCATCAGTTCGAATTTCTGCAGTGAGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp GCTGCACTCTCGGTTAGGGTGTTCCAAACAATAGGCAGAATCTGCTaGATGGAGGACACCATGTGCTTTGGGAAGTTTTTCACTAGGGCT +
Preference number: 5 (lower is better)
Translates to: AALSVRVFQTIGRIC*MEDTMCFGKFFTRA
Trigger: AGCCCTAGTGAAAAACTTCCCAAAGCACATGGTGTCCTCCATGCAGCAGATTCTGCCTATTGTTTGGAACACCCTAACCGAGAGTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp TTCACACGGATATCCTGTAGCCGTTTGTCATCTGCATTGATGCCATaGTGGAGCAGCTTACAGAGTGCCACAGAGCTGACTTTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: FTRISCSRLSSALMP*WSSLQSATELTLPS
Trigger: TGAAGGCAAAGTCAGCTCTGTGGCACTCTGTAAGCTGCTCCAGCATGGCATCAATGCAGATGACAAACGGCTACAGGATATCCGTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 90 bp CAGTGCCACTGTTTTTGGTTTGCTCAGCTTCTTGTAAATGTCGAGTaGCTGCAGCAGCCAGGGCTGCTGCACTTTCATTCTGGAAATCTG +
Preference number: 5 (lower is better)
Translates to: QCHCFWFAQLLVNVE*LQQPGLLHFHSGNL
Trigger: CAGATTTCCAGAATGAAAGTGCAGCAGCCCTGGCTGCTGCAGCCACTCGACATTTACAAGAAGCTGAGCAAACCAAAAACAGTGGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGACAAATTGTTGGGGGTaGGCTGTCCATACTTTAATC +
Preference number: 5 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGTNCWG*AVHTLI
Trigger: GATTAAAGTATGGACAGCCAACCCCCAACAATTTGT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCATTAGCCTCCATGACGTaGGAGAGCTCGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPLASMT*ESSLMI
Trigger: GATCATCAACGAGCTCTCCAACGTCATGGAGGCTAA...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAAGTCTTCAGGGGAACTTaGAGAAATGTCCTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKVFRGT*RNVLCS
Trigger: GGAACAAAGGACATTTCTCAAAGTTCCCCTGAAGAC...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAACATGAGACCATTCTTTaGTGCCAATATCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKHETIL*CQYQRL
Trigger: CAGCCTCTGATATTGGCACAAAAGAATGGTCTCATG...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGACTGGTCTCAAACTCTaGGGCTTAAGTGATCTGCCC +
Preference number: 5 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKTGLKL*GLSDLP
Trigger: GGGCAGATCACTTAAGCCCAAGAGTTTGAGACCAGT...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp GTGTTCCAAACAATAGGCAGAATCTGCTGCATGGAGGACACCATGTaGTTTGGGAAGTTTTTCACTAGGGCTGTCACTGCCTTTAGGACC +
Preference number: 5 (lower is better)
Translates to: VFQTIGRICCMEDTM*FGKFFTRAVTAFRT
Trigger: GGTCCTAAAGGCAGTGACAGCCCTAGTGAAAAACTTCCCAAAGCACATGGTGTCCTCCATGCAGCAGATTCTGCCTATTGTTTGGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCGAGCAGGTTGAAGAGTaGGGGCCAAGCTTCAGGCCA +
Preference number: 5 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPEQVEE*GPSFRP
Trigger: TGGCCTGAAGCTTGGCCCCAACTCTTCAACCTGCTC...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGCAGTTAGCCTCAGAACCTGGCTGGCATGGGACGACTGTGAACATGCCCGCATGCACAATCCTAAAGTaGAAAAACTGGAAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: KQLASEPGWHGTTVNMPACTILK*KNWKSN
Trigger: GTTTGACTTCCAGTTTTTCAACTTTAGGATTGTGCA...TGCGGGCATGTTCACAGTCGTCCCATGCCAGCCAGGTTCTGAGGCTAACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CTTCCTCTTTTGGAAACGGACTACCGTTCGGTTCAACCCACTAGAATCCCCAAGGGTATTGTTAGCTCCTaGCAAGTGTTCAAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: LPLLETDYRSVQPTRIPKGIVSS*QVFKGC
Trigger: GCAACCCTTGAACACTTGCAAGGAGCTAACAATACC...CTTGGGGATTCTAGTGGGTTGAACCGAACGGTAGTCCGTTTCCAAAAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTCTCCAGAAGCAGGTATaGTTAGCTCCTTGCAAGTGT +
Preference number: 5 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFLQKQV*LAPCKC
Trigger: ACACTTGCAAGGAGCTAACAATACCTGCTTCTGGAG...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGCTGGCATGGGACGACTGTGAACATGCCCGCAGGCTTCTCAAAGGTAGTAAACTGCTACCTGGTTTGTaGTTATTATGGTTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: WLAWDDCEHARRLLKGSKLLPGL*LLWFVP
Trigger: GGGAACAAACCATAATAACAACAAACCAGGTAGCAG...TTTACTACCTTTGAGAAGCCTGCGGGCATGTTCACAGTCGTCCCATGCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 90 bp AAAGCTGCACTCTCGGTTAGGGTGTTCCAAACAATAGGCAGAATCTaGTGCATGGAGGACACCATGTGCTTTGGGAAGTTTTTCACTAGG +
Preference number: 5 (lower is better)
Translates to: KAALSVRVFQTIGRI*CMEDTMCFGKFFTR
Trigger: CCTAGTGAAAAACTTCCCAAAGCACATGGTGTCCTCCATGCAGCAGATTCTGCCTATTGTTTGGAACACCCTAACCGAGAGTGCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAATATATAGGAACAGCTaGAGGGGAAGGGTTATGTCA +
Preference number: 5 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRIYRNS*RGRVMS
Trigger: TGACATAACCCTTCCCCTCAAGCTGTTCCTATATAT...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGGGACTCCATGCAGCCTTTTCCCTAGGAAGTTCTATCATCTCCAGGTGCTTTTTTTCTCAGCACCACTaGGTCAGATCTGCCATCATT +
Preference number: 5 (lower is better)
Translates to: WGLHAAFSLGSSIISRCFFSQHH*VRSAII
Trigger: AATGATGGCAGATCTGACCAAGTGGTGCTGAGAAAA...AAAGCACCTGGAGATGATAGAACTTCCTAGGGAAAAGGCTGCATGGAGTCCCCA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTTTCACTGGACCATCCTaGAACTTCCCAAAGCCATGT +
Preference number: 5 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTFTGPS*NFPKPC
Trigger: ACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAA...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGAGGTGGGAAGAGTAGCCAGAAATaGGCCTTTTATTTCCTACTT +
Preference number: 5 (lower is better)
Translates to: WAIMFLDSPAEGSRNRGGKSSQK*AFYFLL
Trigger: AAGTAGGAAATAAAAGGCCAATTTCTGGCTACTCTT...CCCACCTCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GGCTGCAGTGCTACAATTCATTCCTCAGAGCTGTCCTCCCAAAGGCTCACCAAGCCTACTGACTTTATCTaGTCAACATCTCTAATCCAG +
Preference number: 5 (lower is better)
Translates to: GCSATIHSSELSSQRLTKPTDFI*STSLIQ
Trigger: CTGGATTAGAGATGTTGACAAGATAAAGTCAGTAGG...CTTGGTGAGCCTTTGGGAGGACAGCTCTGAGGAATGAATTGTAGCACTGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGGCTGCTCTTGAACTCTaGATGTCGTGGTCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLAALEL*MSWSAC
Trigger: GCAGGCGGACCACGACATCAAGAGTTCAAGAGCAGC...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGACTGCTCCTCAGTGATTaGCATGTACAGGATAATATA +
Preference number: 5 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRLLLSD*HVQDNI
Trigger: TATATTATCCTGTACATGCAAATCACTGAGGAGCAG...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGACAGGTGCTGTCGGCTaGTCCACTCAGCCATCACAA +
Preference number: 5 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLTGAVG*STQPSQ
Trigger: TTGTGATGGCTGAGTGGACAAGCCGACAGCACCTGT...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCCTTGGGGCCATCCCCTaGAGTGGAGATTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPLGAIP*SGDSDS
Trigger: TGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAG...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGCAAGTGTTCAAGGGTaGCCTTCTCCATGCAACTTA +
Preference number: 5 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMASVQG*PSPCNL
Trigger: TAAGTTGCATGGAGAAGGCAACCCTTGAACACTTGC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AACACAATTAAGTACCTGCACATCGAGGGGTCCAAGACCTTCTGCTCTCACCCACATAATTTAAGCAGCTaGTCCAAAGTCACCCAACAG +
Preference number: 5 (lower is better)
Translates to: NTIKYLHIEGSKTFCSHPHNLSS*SKVTQQ
Trigger: CTGTTGGGTGACTTTGGACAAGCTGCTTAAATTATG...TGGGTGAGAGCAGAAGGTCTTGGACCCCTCGATGTGCAGGTACTTAATTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 90 bp AGGTCTGCAAGGATGACATTGGTCAGGAACCCATGCATGTCAAAATaGATCCTGCCATTTTTCACACTGTCAGTGATGATGGCCTTCACT +
Preference number: 5 (lower is better)
Translates to: RSARMTLVRNPCMSK*ILPFFTLSVMMAFT
Trigger: AGTGAAGGCCATCATCACTGACAGTGTGAAAAATGGCAGGATTCATTTTGACATGCATGGGTTCCTGACCAATGTCATCCTTGCAGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGCAGCGTTCTGGGTTTTaGGCTGACTTAGAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQQRSGF*ADLERV
Trigger: CACCCGCTCTAAGTCAGCCAAAAACCCAGAACGCTG...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCAGAATGAAGCTGCTCTaGCCTGTTCCTCCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFRMKLL*PVPPEN
Trigger: GTTCTCAGGAGGAACAGGCAAGAGCAGCTTCATTCT...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TCCTTCTGGGCAATAATGTTTCTGGACTCGCCAGCAGAGGGCTCTAGGAACAGATTGGAAAATCCTTACTaGTCAGTCTTTAAGTCCTAC +
Preference number: 5 (lower is better)
Translates to: SFWAIMFLDSPAEGSRNRLENPY*SVFKSY
Trigger: GTAGGACTTAAAGACTGACAAGTAAGGATTTTCCAA...TCTGTTCCTAGAGCCCTCTGCTGGCGAGTCCAGAAACATTATTGCCCAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGACTCCCCCTCTGGTCTaGGCTTCCTCTTTTGGAAAC +
Preference number: 5 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLTPPLV*ASSFGN
Trigger: GTTTCCAAAAGAGGAAGCCAAGACCAGAGGGGGAGT...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTCAGCCTCATTTGCATaGGGCCCTGACAGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSSASFA*GPDRLQ
Trigger: TTGAAGCCTGTCAGGGCCCAATGCAAATGAGGCTGA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TATGTATTTCACTGGACCATCCTTGAACTTCCCAAAGCCATGTCCTGTTTCCTCATATCCTGTAGCCGTTaGTCATCTGCATTGATGCCA +
Preference number: 5 (lower is better)
Translates to: YVFHWTILELPKAMSCFLISCSR*SSALMP
Trigger: TGGCATCAATGCAGATGACAAACGGCTACAGGATAT...GAGGAAACAGGACATGGCTTTGGGAAGTTCAAGGATGGTCCAGTGAAATACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCACGTTGGAGAGCTCGTaGATGATCAGCTTTAGGATC +
Preference number: 5 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFTLESS*MISFRI
Trigger: GATCCTAAAGCTGATCATCAACGAGCTCTCCAACGT...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTTCACTGAAATGGGGTaGGGGGCAAGAGTAGCCAGA +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSFTEMG*GARVAR
Trigger: TCTGGCTACTCTTGCCCCCAACCCCATTTCAGTGAA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TACCAGCTACAATATCCTTGGGGCCATCCCCTTGAGTGGAGATTCAGATTCACTCCCGGCCTACAAAAATaGGAATTTTATTGCGATTAC +
Preference number: 5 (lower is better)
Translates to: YQLQYPWGHPLEWRFRFTPGLQK*EFYCDY
Trigger: GTAATCGCAATAAAATTCCAATTTTTGTAGGCCGGG...AGTGAATCTGAATCTCCACTCAAGGGGATGGCCCCAAGGATATTGTAGCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCATCTTCTACAAATTGTaGGGGGTTGGCTGTCCATAC +
Preference number: 5 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFIFYKL*GVGCPY
Trigger: GTATGGACAGCCAACCCCCAACAATTTGTAGAAGAT...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCTTCATCTTCTACAAATaGTTGGGGGTTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFFIFYK*LGVGCP
Trigger: TGGACAGCCAACCCCCAACAATTTGTAGAAGATGAA...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGATCATTGGAGTCATCTaGACTCCACTCTGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLIIGVI*TPLCRS
Trigger: ACTCCTGCAGAGTGGAGTCAAGATGACTCCAATGAT...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CAA 90 bp AAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTTCGTCTTCAGGGGAACTTaGAGAAATGTCCTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: KVLEMACLQGNFEKCPLFVFRGT*RNVLCS
Trigger: GGAACAAAGGACATTTCTCAAAGTTCCCCTGAAGAC...GAACAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS-3UTR CAA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGGAGCAGAAAGGACCCTaGCCAAAGGATTTAGGACCA +
Preference number: 5 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQEQKGP*PKDLGP
Trigger: TGGTCCTAAATCCTTTGGCAAGGGTCCTTTCTGCTC...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGACAAGTACAAGCTGCTaGGACTATAATCACACACTT +
Preference number: 5 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMTSTSC*DYNHTL
Trigger: AAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGT...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCGATCGAGCACTTGGATaGATGAGGAGGAACTCACTG +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSDRALG*MRRNSL
Trigger: CAGTGAGTTCCTCCTCATCAATCCAAGTGCTCGATC...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCAGGACACCATGTGCTTaGGGAAGTTTTTCACTAGGG +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSRTPCA*GSFSLG
Trigger: CCCTAGTGAAAAACTTCCCAAAGCACATGGTGTCCT...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCCCAGCAAAGGAATGTTaGTCCAGCGTTCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSPAKEC*SSVLGF
Trigger: AAAACCCAGAACGCTGGACAAACATTCCTTTGCTGG...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCCATTTCAGGCTATGTTaGCCAAGACACACTAGAATG +
Preference number: 5 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPHFRLC*PRHTRM
Trigger: CATTCTAGTGTGTCTTGGCAAACATAGCCTGAAATG...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp TTGCAGTTCACTAGAGCTTTCACCATAGGGTCCAGAAGCACAGCTATTCTCATGGATTTAGGACCACTTTaGGCACTAGATATAGAATGT +
Preference number: 5 (lower is better)
Translates to: LQFTRAFTIGSRSTAILMDLGPL*ALDIEC
Trigger: ACATTCTATATCTAGTGCCAAAAGTGGTCCTAAATC...CATGAGAATAGCTGTGCTTCTGGACCCTATGGTGAAAGCTCTAGTGAACTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAAACAAATAGGCAACAAGTACAAGCTGCTTGGACTATAATCACACACTTGCAGAGCCAGCAACAAGTCTaGAGCTGCTATTCTAACAGT +
Preference number: 5 (lower is better)
Translates to: KTNRQQVQAAWTIITHLQSQQQV*SCYSNS
Trigger: ACTGTTAGAATAGCAGCTCAAGACTTGTTGCTGGCT...CTGCAAGTGTGTGATTATAGTCCAAGCAGCTTGTACTTGTTGCCTATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCATATACGTCTGTAACTaGTGTTATCAGCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPIYVCN*CYQLPS
Trigger: GGAAGGAAGCTGATAACACAAGTTACAGACGTATAT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp AAAAAGGTTCTAGAGATGGCATGTCTTCAGGGGAACTTTGAGAAATGTCCTTTGTATTTCGTACTACTGTaGTCAGGATATCAATGGCTG +
Preference number: 5 (lower is better)
Translates to: KKVLEMACLQGNFEKCPLYFVLL*SGYQWL
Trigger: CAGCCATTGATATCCTGACAACAGTAGTACGAAATA...CAAAGGACATTTCTCAAAGTTCCCCTGAAGACATGCCATCTCTAGAACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCAGATGCCACTTTAGGTaGAGAAGAAAGTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSRCHFR*RRKCIS
Trigger: TGAGATGCACTTTCTTCTCAACCTAAAGTGGCATCT...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp GAGAATGAGTCTCTATCCTGCTACCTGGTTTGTTGTTATTATGGTTTGTTCCCCAAAAGGAAGATCAAATaGCCATCTGTCTGGCTTATT +
Preference number: 5 (lower is better)
Translates to: ENESLSCYLVCCYYGLFPKRKIK*PSVWLI
Trigger: AATAAGCCAGACAGATGGCAATTTGATCTTCCTTTT...GGGGAACAAACCATAATAACAACAAACCAGGTAGCAGGATAGAGACTCATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCTTATTGCGATTACTTTaGGGTGCTTTGCTACTGGAA +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSLLRLL*GALLLE
Trigger: TTCCAGTAGCAAAGCACCCAAAAGTAATCGCAATAA...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS-3UTR CAA 90 bp CAAAGTGGACTACTTTGTAAGGTTAGTAGGTGGTCTGAGGTAAAAGTATTTAGCATCCTCATTTACTCTTaGAACCCCAAACAGACTAAA +
Preference number: 5 (lower is better)
Translates to: QSGLLCKVSRWSEVKVFSILIYS*NPKQTK
Trigger: TTTAGTCTGTTTGGGGTTCAAAGAGTAAATGAGGAT...GCTAAATACTTTTACCTCAGACCACCTACTAACCTTACAAAGTAGTCCACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp GTGCCCGCCACATGCCCAGGAGTGCGTCTGGATCCTTaGGGGGCGCCCTTCGCAGGTGGACAGTGCTTACGC +
Preference number: 6 (lower is better)
Translates to: VPATCPGVRLDP*GAPFAGGQCLR
Trigger: GCGTAAGCACTGTCCACCTGCGAAGGGCGCCCCTCAAGGATCCAGACGCACTCCTGGGCATGTGGCGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464348.5
CDS GCA 72 bp CTTTTTCCGAGCGTGGCCGCCTTCCGCTCGGCTCAGTaGCCGCCACATGCCCAGGAGTGCGTCTGGATCCTT +
Preference number: 6 (lower is better)
Translates to: LFPSVAAFRSAQ*PPHAQECVWIL
Trigger: AAGGATCCAGACGCACTCCTGGGCATGTGGCGGGCACTGAGCCGAGCGGAAGGCGGCCACGCTCGGAAAAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464348.5
CDS CAA 90 bp GCTCGGCTCAGTGCCCGCCACATGCCCAGGAGTGCGTCTGGATCCTaGAGGGGCGCCCTTCGCAGGTGGACAGTGCTTACGCTATACCTC +
Preference number: 6 (lower is better)
Translates to: ARLSARHMPRSASGS*RGALRRWTVLTLYL
Trigger: GAGGTATAGCGTAAGCACTGTCCACCTGCGAAGGGCGCCCCTCAAGGATCCAGACGCACTCCTGGGCATGTGGCGGGCACTGAGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464348.5
CDS TCA 72 bp CTAGATTCTCCCCGAGTTCCCGCCCTGCCTTGGAGATaGGGGTGGAAACAAGGCGGCCCACAAAGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: LDSPRVPALPWR*GWKQGGPQRPQ
Trigger: CTGCGGCCTTTGTGGGCCGCCTTGTTTCCACCCTCATCTCCAAGGCAGGGCGGGAACTCGGGGAGAATCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp GTTGGGGCCAAGCTTCAGGCCAGTCCCAGTGGGCAATaGCTGACACTGCATAGGCCACACTGGAGCGCACTT +
Preference number: 6 (lower is better)
Translates to: VGAKLQASPSGQ*LTLHRPHWSAL
Trigger: AAGTGCGCTCCAGTGTGGCCTATGCAGTGTCAGCCATTGCCCACTGGGACTGGCCTGAAGCTTGGCCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS CCA 72 bp AGTGCGTCTGGATCCTTGAGGGGCGCCCTTCGCAGGTaGACAGTGCTTACGCTATACCTCCGTCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: SASGSLRGALRR*TVLTLYLRHLQ
Trigger: CTGGAGGTGACGGAGGTATAGCGTAAGCACTGTCCACCTGCGAAGGGCGCCCCTCAAGGATCCAGACGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464348.5
CDS CAA 90 bp GCACGAAGAATCTGGTCTAGATTCTCCCCGAGTTCCCGCCCTGCCTaGGAGATGAGGGTGGAAACAAGGCGGCCCACAAAGGCCGCAGTG +
Preference number: 6 (lower is better)
Translates to: ARRIWSRFSPSSRPA*EMRVETRRPTKAAV
Trigger: CACTGCGGCCTTTGTGGGCCGCCTTGTTTCCACCCTCATCTCCAAGGCAGGGCGGGAACTCGGGGAGAATCTAGACCAGATTCTTCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp TCTGAGGTGCGGGGGTCCAGGAGCTGGCTCACCACTTaGATCACATACCACAGTCCATTGTGGCCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SEVRGSRSWLTT*ITYHSPLWPCS
Trigger: TGAGCAGGGCCACAATGGACTGTGGTATGTGATGCAAGTGGTGAGCCAGCTCCTGGACCCCCGCACCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp GCCGCAGTGAACTCTGAGGTGCGGGGGTCCAGGAGCTaGCTCACCACTTGCATCACATACCACAGTCCATTG +
Preference number: 6 (lower is better)
Translates to: AAVNSEVRGSRS*LTTCITYHSPL
Trigger: CAATGGACTGTGGTATGTGATGCAAGTGGTGAGCCAGCTCCTGGACCCCCGCACCTCAGAGTTCACTGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp CTCCTCCTGGTCCTCCCACATATCATTGGAGTCATCTaGACTCCACTCTGCAGGAGTGGCCTGGCGAGCGGC +
Preference number: 6 (lower is better)
Translates to: LLLVLPHIIGVI*TPLCRSGLASG
Trigger: GCCGCTCGCCAGGCCACTCCTGCAGAGTGGAGTCAAGATGACTCCAATGATATGTGGGAGGACCAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS TCA 72 bp TCCTCCTGGTCCTCCCACATATCATTGGAGTCATCTTaGCTCCACTCTGCAGGAGTGGCCTGGCGAGCGGCA +
Preference number: 6 (lower is better)
Translates to: SSWSSHISLESS*LHSAGVAWRAA
Trigger: TGCCGCTCGCCAGGCCACTCCTGCAGAGTGGAGTCAAGATGACTCCAATGATATGTGGGAGGACCAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS CCA 72 bp CCGCTCACCAACATCTCCATGAGCAGGTTGAAGAGTTaGGGCCAAGCTTCAGGCCAGTCCCAGTGGGCAATG +
Preference number: 6 (lower is better)
Translates to: PLTNISMSRLKS*GQASGQSQWAM
Trigger: CATTGCCCACTGGGACTGGCCTGAAGCTTGGCCCCAACTCTTCAACCTGCTCATGGAGATGTTGGTGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS TCA 72 bp CCGCCCGCACCTCCTGTACTGGGGATAGGATCCCGGTaGGCGTATCCACTAACGCTTCCTTTAATCCTTGTG +
Preference number: 6 (lower is better)
Translates to: PPAPPVLGIGSR*AYPLTLPLILV
Trigger: CACAAGGATTAAAGGAAGCGTTAGTGGATACGCTCACCGGGATCCTATCCCCAGTACAGGAGGTGCGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000464348.5
CDS TCA 72 bp CTCATCATGCCACTGGGCTACTTGTTCCAGGGTCACTaGCACATAGGCCCGCAAGCACTCTCCGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: LIMPLGYLFQGH*HIGPQALSAIL
Trigger: CAGAATGGCGGAGAGTGCTTGCGGGCCTATGTGTCAGTGACCCTGGAACAAGTAGCCCAGTGGCATGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp GGCTGTCGCACAAAGCCCTGCAGGAATCTTGTCTGCTaGGGCCTGCATTATGCTGACCAGAGTGGGAATCAG +
Preference number: 6 (lower is better)
Translates to: GCRTKPCRNLVC*GLHYADQSGNQ
Trigger: CTGATTCCCACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCTTTGTGCGACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp GCCTGCTGCATCTTACTGAGGATGGCACGAAGAATCTaGTCTAGATTCTCCCCGAGTTCCCGCCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: ACCILLRMARRI*SRFSPSSRPAL
Trigger: CAAGGCAGGGCGGGAACTCGGGGAGAATCTAGACCAGATTCTTCGTGCCATCCTCAGTAAGATGCAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp TCCGCTCACCAACATCTCCATGAGCAGGTTGAAGAGTaGGGGCCAAGCTTCAGGCCAGTCCCAGTGGGCAAT +
Preference number: 6 (lower is better)
Translates to: SAHQHLHEQVEE*GPSFRPVPVGN
Trigger: ATTGCCCACTGGGACTGGCCTGAAGCTTGGCCCCAACTCTTCAACCTGCTCATGGAGATGTTGGTGAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS CAA 90 bp TGGACGGCATTTAAGTCTCCGCTCACCAACATCTCCATGAGCAGGTaGAAGAGTTGGGGCCAAGCTTCAGGCCAGTCCCAGTGGGCAATG +
Preference number: 6 (lower is better)
Translates to: WTAFKSPLTNISMSR*KSWGQASGQSQWAM
Trigger: CATTGCCCACTGGGACTGGCCTGAAGCTTGGCCCCAACTCTTCAACCTGCTCATGGAGATGTTGGTGAGCGGAGACTTAAATGCCGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS TCA 72 bp AGGTTGAGGACCTCTGAGCTGAACTGGGCTGCTAGGTaGATTAAGCCATCAAGGATGCTGGGGAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RLRTSELNWAAR*IKPSRMLGRKG
Trigger: GCCCTTCCTCCCCAGCATCCTTGATGGCTTAATTCACCTAGCAGCCCAGTTCAGCTCAGAGGTCCTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp GATTGCCAGTGCCCCCTGGGGATCTACAGTCAGTTCTaGCAAGTGAACACCAAATTCCTCCGTCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: DCQCPLGIYSQF*QVNTKFLRHLQ
Trigger: CTGGAGGTGACGGAGGAATTTGGTGTTCACTTGGCAGAACTGACTGTAGATCCCCAGGGGGCACTGGCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp CTCCCACATATCATTGGAGTCATCTTGACTCCACTCTaGAGGAGTGGCCTGGCGAGCGGCATTAGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: LPHIIGVILTPL*RSGLASGISLH
Trigger: ATGGAGGCTAATGCCGCTCGCCAGGCCACTCCTGCAGAGTGGAGTCAAGATGACTCCAATGATATGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS CAA 72 bp GGAGTGGCCTGGCGAGCGGCATTAGCCTCCATGACGTaGGAGAGCTCGTTGATGATCAGCTTTAGGATCTTG +
Preference number: 6 (lower is better)
Translates to: GVAWRAALASMT*ESSLMISFRIL
Trigger: CAAGATCCTAAAGCTGATCATCAACGAGCTCTCCAACGTCATGGAGGCTAATGCCGCTCGCCAGGCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp TGCTGGGGCCTGCATTATGCTGACCAGAGTGGGAATCAGCCTCATTaGCATTGGGCCCTGACAGGCTTCAATCTGGGACAGCTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: CWGLHYADQSGNQPH*HWALTGFNLGQLLE
Trigger: TTCAAGGAGCTGTCCCAGATTGAAGCCTGTCAGGGCCCAATGCAAATGAGGCTGATTCCCACTCTGGTCAGCATAATGCAGGCCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp CACTCTGCAGGAGTGGCCTGGCGAGCGGCATTAGCCTCCATGACGTaGGAGAGCTCGTTGATGATCAGCTTTAGGATCTTGACCAGCAAA +
Preference number: 6 (lower is better)
Translates to: HSAGVAWRAALASMT*ESSLMISFRILTSK
Trigger: TTTGCTGGTCAAGATCCTAAAGCTGATCATCAACGAGCTCTCCAACGTCATGGAGGCTAATGCCGCTCGCCAGGCCACTCCTGCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp AGTGCCCCCTGGGGATCTACAGTCAGTTCTGCCAAGTaGACACCAAATTCCTCCGTCACCTCCAGCACCTTA +
Preference number: 6 (lower is better)
Translates to: SAPWGSTVSSAK*TPNSSVTSSTL
Trigger: TAAGGTGCTGGAGGTGACGGAGGAATTTGGTGTTCACTTGGCAGAACTGACTGTAGATCCCCAGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp GGGCACACCAGTGAGTCTCCACATATTGTTTCAAGATaGCTGATGCCAGCTGACGGATTGCCAGTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: GHTSESPHIVSR*LMPADGLPVPP
Trigger: AGGGGGCACTGGCAATCCGTCAGCTGGCATCAGTCATCTTGAAACAATATGTGGAGACTCACTGGTGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS TCA 72 bp CAGGCTTCAATCTGGGACAGCTCCTTGAAGATGTCCTaGGCCAGTGAGGCGACGACGGGATCATTACTGTAC +
Preference number: 6 (lower is better)
Translates to: QASIWDSSLKMS*ASEATTGSLLY
Trigger: GTACAGTAATGATCCCGTCGTCGCCTCACTGGCTCAGGACATCTTCAAGGAGCTGTCCCAGATTGAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp GCACAAAGCCCTGCAGGAATCTTGTCTGCTGGGGCCTaGATTATGCTGACCAGAGTGGGAATCAGCCTCATT +
Preference number: 6 (lower is better)
Translates to: AQSPAGILSAGA*IMLTRVGISLI
Trigger: AATGAGGCTGATTCCCACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp AATGGCTGTCGCACAAAGCCCTGCAGGAATCTTGTCTaGTGGGGCCTGCATTATGCTGACCAGAGTGGGAAT +
Preference number: 6 (lower is better)
Translates to: NGCRTKPCRNLV*WGLHYADQSGN
Trigger: ATTCCCACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCTTTGTGCGACAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp ACCACTTGCATCACATACCACAGTCCATTGTGGCCCTaGTCATCATGCCACTGGGCTACTTGTTCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: TTCITYHSPLWP*SSCHWATCSRV
Trigger: GACCCTGGAACAAGTAGCCCAGTGGCATGATGAGCAGGGCCACAATGGACTGTGGTATGTGATGCAAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp CCCAGTGGGCAATGGCTGACACTGCATAGGCCACACTaGAGCGCACTTTGCTTATCGATTCTCTCAACCCAT +
Preference number: 6 (lower is better)
Translates to: PSGQWLTLHRPH*SALCLSILSTH
Trigger: ATGGGTTGAGAGAATCGATAAGCAAAGTGCGCTCCAGTGTGGCCTATGCAGTGTCAGCCATTGCCCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS CCA 72 bp TGGCTCACCACTTGCATCACATACCACAGTCCATTGTaGCCCTGCTCATCATGCCACTGGGCTACTTGTTCC +
Preference number: 6 (lower is better)
Translates to: WLTTCITYHSPL*PCSSCHWATCS
Trigger: GGAACAAGTAGCCCAGTGGCATGATGAGCAGGGCCACAATGGACTGTGGTATGTGATGCAAGTGGTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp TGTGTGAAGGGTACACTGTGCCACAGCAGGGAAAGCTaGGCAGATGAGAAGCTGGGAAAGGGGAGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: CVKGTLCHSRES*ADEKLGKGRLC
Trigger: ACAAAGCCTCCCCTTTCCCAGCTTCTCATCTGCCAAGCTTTCCCTGCTGTGGCACAGTGTACCCTTCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp CTTGTCCACTCAGCCATCACAAACTCTAGAGCAGGTTaGCCAGTAGGTCCTGGGAGGCTACACAGGAACTCC +
Preference number: 6 (lower is better)
Translates to: LVHSAITNSRAG*PVGPGRLHRNS
Trigger: GGAGTTCCTGTGTAGCCTCCCAGGACCTACTGGCAAACCTGCTCTAGAGTTTGTGATGGCTGAGTGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp GTTGTCAGGATATCAATGGCTGTCGCACAAAGCCCTGCAGGAATCTaGTCTGCTGGGGCCTGCATTATGCTGACCAGAGTGGGAATCAGC +
Preference number: 6 (lower is better)
Translates to: VVRISMAVAQSPAGI*SAGACIMLTRVGIS
Trigger: GCTGATTCCCACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCTTTGTGCGACAGCCATTGATATCCTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp CATCTGGTATCTGGAGGGCCTGAACAAAGGCCTCTGTaGACTGCTGTACCACGGGAAAGATCAGGACTTTGG +
Preference number: 6 (lower is better)
Translates to: HLVSGGPEQRPL*TAVPRERSGLW
Trigger: CCAAAGTCCTGATCTTTCCCGTGGTACAGCAGTTCACAGAGGCCTTTGTTCAGGCCCTCCAGATACCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp ATCACATACCACAGTCCATTGTGGCCCTGCTCATCATaGCACTGGGCTACTTGTTCCAGGGTCACTGACACA +
Preference number: 6 (lower is better)
Translates to: ITYHSPLWPCSS*HWATCSRVTDT
Trigger: TGTGTCAGTGACCCTGGAACAAGTAGCCCAGTGGCATGATGAGCAGGGCCACAATGGACTGTGGTATGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp ATCAGGGACTGCATGACACTGAGCGTCTCTGCCTGCTaGATCTTACTGAGGATGGCACGAAGAATCTGGTCT +
Preference number: 6 (lower is better)
Translates to: IRDCMTLSVSAC*ILLRMARRIWS
Trigger: AGACCAGATTCTTCGTGCCATCCTCAGTAAGATGCAGCAGGCAGAGACGCTCAGTGTCATGCAGTCCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp CACCATGATCAGGGACTGCATGACACTGAGCGTCTCTaGCTGCTGCATCTTACTGAGGATGGCACGAAGAAT +
Preference number: 6 (lower is better)
Translates to: HHDQGLHDTERL*LLHLTEDGTKN
Trigger: ATTCTTCGTGCCATCCTCAGTAAGATGCAGCAGGCAGAGACGCTCAGTGTCATGCAGTCCCTGATCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp TCACGAGTGAATTCTGTCAGCACACGCATGGCTCCATaGACGGCATTTAAGTCTCCGCTCACCAACATCTCC +
Preference number: 6 (lower is better)
Translates to: SRVNSVSTRMAP*TAFKSPLTNIS
Trigger: GGAGATGTTGGTGAGCGGAGACTTAAATGCCGTCCATGGAGCCATGCGTGTGCTGACAGAATTCACTCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000464348.5
CDS CCA 72 bp AGTTGGTTCTCATCTGTCAGCACACGCATGGCTCCATaGACGGCATTTAAGTCTCCGCTCACCAACATCTCC +
Preference number: 6 (lower is better)
Translates to: SWFSSVSTRMAP*TAFKSPLTNIS
Trigger: GGAGATGTTGGTGAGCGGAGACTTAAATGCCGTCCATGGAGCCATGCGTGTGCTGACAGATGAGAACCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479374.1
CDS CAA 72 bp ATATCAATGGCTGTCGCACAAAGCCCTGCAGGAATCTaGTCTGCTGGGGCCTGCATTATGCTGACCAGAGTG +
Preference number: 6 (lower is better)
Translates to: ISMAVAQSPAGI*SAGACIMLTRV
Trigger: CACTCTGGTCAGCATAATGCAGGCCCCAGCAGACAAGATTCCTGCAGGGCTTTGTGCGACAGCCATTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp TCCTCTCCCTTCACACGGATATCCTGTAGCCGTTTGTCATCTGCATaGATGCCATGCTGGAGCAGCTTACAGAGTGCCACAGAGCTGACT +
Preference number: 6 (lower is better)
Translates to: SSPFTRISCSRLSSA*MPCWSSLQSATELT
Trigger: AGTCAGCTCTGTGGCACTCTGTAAGCTGCTCCAGCATGGCATCAATGCAGATGACAAACGGCTACAGGATATCCGTGTGAAGGGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp GTGGCCTGGCGAGCGGCATTAGCCTCCATGACGTTGGAGAGCTCGTaGATGATCAGCTTTAGGATCTTGACCAGCAAAGGAATGTTTGTC +
Preference number: 6 (lower is better)
Translates to: VAWRAALASMTLESS*MISFRILTSKGMFV
Trigger: GACAAACATTCCTTTGCTGGTCAAGATCCTAAAGCTGATCATCAACGAGCTCTCCAACGTCATGGAGGCTAATGCCGCTCGCCAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp ACTGCAGAAATTCGAACTGATGGGGGCTGTGTCTCGTaGAGACCACTAACTGTTGCCTGTAGGAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: TAEIRTDGGCVS*RPLTVACRNCW
Trigger: CCAGCAGTTCCTACAGGCAACAGTTAGTGGTCTTCACGAGACACAGCCCCCATCAGTTCGAATTTCTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp TCACACGGATATCCTGTAGCCGTTTGTCATCTGCATTaGTGCCATGCTGGAGCAGCTTACAGAGTGCCACAG +
Preference number: 6 (lower is better)
Translates to: SHGYPVAVCHLH*CHAGAAYRVPQ
Trigger: CTGTGGCACTCTGTAAGCTGCTCCAGCATGGCATCAATGCAGATGACAAACGGCTACAGGATATCCGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp TCCTGTAGCCGTTTGTCATCTGCATTGATGCCATGCTaGAGCAGCTTACAGAGTGCCACAGAGCTGACTTTG +
Preference number: 6 (lower is better)
Translates to: SCSRLSSALMPC*SSLQSATELTL
Trigger: CAAAGTCAGCTCTGTGGCACTCTGTAAGCTGCTCCAGCATGGCATCAATGCAGATGACAAACGGCTACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp CGAGCGGCATTAGCCTCCATGACGTTGGAGAGCTCGTaGATGATCAGCTTTAGGATCTTGACCAGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: RAALASMTLESS*MISFRILTSKG
Trigger: TCCTTTGCTGGTCAAGATCCTAAAGCTGATCATCAACGAGCTCTCCAACGTCATGGAGGCTAATGCCGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp ATTGTCATCTGTGTGAAGGGTACACTGTGCCACAGCAGGGAAAGCTaGGCAGATGAGAAGCTGGGAAAGGGGAGGCTTTGTATTTCGTAC +
Preference number: 6 (lower is better)
Translates to: IVICVKGTLCHSRES*ADEKLGKGRLCISY
Trigger: GTACGAAATACAAAGCCTCCCCTTTCCCAGCTTCTCATCTGCCAAGCTTTCCCTGCTGTGGCACAGTGTACCCTTCACACAGATGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp ATAACCCCAGATGGCTCTCACTGCAGAAATTCGAACTaGTGGGGGCTGTGTCTCGTGAAGACCACTAACTGT +
Preference number: 6 (lower is better)
Translates to: ITPDGSHCRNSN*WGLCLVKTTNC
Trigger: ACAGTTAGTGGTCTTCACGAGACACAGCCCCCATCAGTTCGAATTTCTGCAGTGAGAGCCATCTGGGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp ACAATAGGCAGAATCTGCTGCATGGAGGACACCATGTaGTTTGGGAAGTTTTTCACTAGGGCTGTCACTGCC +
Preference number: 6 (lower is better)
Translates to: TIGRICCMEDTM*FGKFFTRAVTA
Trigger: GGCAGTGACAGCCCTAGTGAAAAACTTCCCAAAGCACATGGTGTCCTCCATGCAGCAGATTCTGCCTATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp ATATCCTGTAGCCGTTTGTCATCTGCATTGATGCCATaGTGGAGCAGCTTACAGAGTGCCACAGAGCTGACT +
Preference number: 6 (lower is better)
Translates to: ISCSRLSSALMP*WSSLQSATELT
Trigger: AGTCAGCTCTGTGGCACTCTGTAAGCTGCTCCAGCATGGCATCAATGCAGATGACAAACGGCTACAGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp GCACCCTTTTCCAGCTCCTCCATGTTACAGATCATATaGGCACAAGTGGTAAAAATCTCCACGGCTCGGGAA +
Preference number: 6 (lower is better)
Translates to: APFSSSSMLQII*AQVVKISTARE
Trigger: TTCCCGAGCCGTGGAGATTTTTACCACTTGTGCCCATATGATCTGTAACATGGAGGAGCTGGAAAAGGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp GCTGGGAAAGGGGAGGCTTTGTATTTCGTACTACTGTaGTCAGGATATCAATGGCTGTCGCACAAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: AGKGEALYFVLL*SGYQWLSHKAL
Trigger: CAGGGCTTTGTGCGACAGCCATTGATATCCTGACAACAGTAGTACGAAATACAAAGCCTCCCCTTTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp TGCCTTCATACTGTCCATAGAACAGGTGCTGTCGGCTaGTCCACTCAGCCATCACAAACTCTAGAGCAGGTT +
Preference number: 6 (lower is better)
Translates to: CLHTVHRTGAVG*STQPSQTLEQV
Trigger: AACCTGCTCTAGAGTTTGTGATGGCTGAGTGGACAAGCCGACAGCACCTGTTCTATGGACAGTATGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp GCCTCCATGACGTTGGAGAGCTCGTTGATGATCAGCTTTAGGATCTaGACCAGCAAAGGAATGTTTGTCCAGCGTTCTGGGTTTTTGGCT +
Preference number: 6 (lower is better)
Translates to: ASMTLESSLMISFRI*TSKGMFVQRSGFLA
Trigger: AGCCAAAAACCCAGAACGCTGGACAAACATTCCTTTGCTGGTCAAGATCCTAAAGCTGATCATCAACGAGCTCTCCAACGTCATGGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp CTCTCGGTTAGGGTGTTCCAAACAATAGGCAGAATCTaGTGCATGGAGGACACCATGTGCTTTGGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: LSVRVFQTIGRI*CMEDTMCFGKF
Trigger: AAACTTCCCAAAGCACATGGTGTCCTCCATGCAGCAGATTCTGCCTATTGTTTGGAACACCCTAACCGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS GCA 72 bp TCGGTTAGGGTGTTCCAAACAATAGGCAGAATCTGCTaGATGGAGGACACCATGTGCTTTGGGAAGTTTTTC +
Preference number: 6 (lower is better)
Translates to: SVRVFQTIGRIC*MEDTMCFGKFF
Trigger: GAAAAACTTCCCAAAGCACATGGTGTCCTCCATGCAGCAGATTCTGCCTATTGTTTGGAACACCCTAACCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS TCA 72 bp TCAGGAGGCCTAAATTTCTCTGATTGGGCACACCAGTaGGTCTCCACATATTGTTTCAAGATGACTGATGCC +
Preference number: 6 (lower is better)
Translates to: SGGLNFSDWAHQ*VSTYCFKMTDA
Trigger: GGCATCAGTCATCTTGAAACAATATGTGGAGACTCACTGGTGTGCCCAATCAGAGAAATTTAGGCCTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361565.9
ENST00000464348.5
ENST00000479374.1
CDS TCA 72 bp AGGATGACATTGGTCAGGAACCCATGCATGTCAAAATaGATCCTGCCATTTTTCACACTGTCAGTGATGATG +
Preference number: 6 (lower is better)
Translates to: RMTLVRNPCMSK*ILPFFTLSVMM
Trigger: CATCATCACTGACAGTGTGAAAAATGGCAGGATTCATTTTGACATGCATGGGTTCCTGACCAATGTCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CCA 72 bp TCATATTTACTTGTAGCAAGAATGTCAGATAAAAGTTaGCCAGCTAAACCATCCTCCTCCTCCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SYLLVARMSDKS*PAKPSSSSSSS
Trigger: GGAAGAGGAGGAGGAGGAGGATGGTTTAGCTGGCCAACTTTTATCTGACATTCTTGCTACAAGTAAATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361565.9
ENST00000456707.1
CDS CAA 72 bp GGAGAATGTATCATCATCTTCATCTTCTACAAATTGTaGGGGGTTGGCTGTCCATACTTTAATCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GECIIIFIFYKL*GVGCPYFNLLL
Trigger: GAGGAGCAGATTAAAGTATGGACAGCCAACCCCCAACAATTTGTAGAAGATGAAGATGATGATACATTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp AACAGTATAGGAGAATGTATCATCATCTTCATCTTCTACAAATTGTaGGGGGTTGGCTGTCCATACTTTAATCTGCTCCTCAGTGATTTG +
Preference number: 6 (lower is better)
Translates to: NSIGECIIIFIFYKL*GVGCPYFNLLLSDL
Trigger: CAAATCACTGAGGAGCAGATTAAAGTATGGACAGCCAACCCCCAACAATTTGTAGAAGATGAAGATGATGATACATTCTCCTATACTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 90 bp TCTAACAGTATAGGAGAATGTATCATCATCTTCATCTTCTACAAATaGTTGGGGGTTGGCTGTCCATACTTTAATCTGCTCCTCAGTGAT +
Preference number: 6 (lower is better)
Translates to: SNSIGECIIIFIFYK*LGVGCPYFNLLLSD
Trigger: ATCACTGAGGAGCAGATTAAAGTATGGACAGCCAACCCCCAACAATTTGTAGAAGATGAAGATGATGATACATTCTCCTATACTGTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9
CDS CAA 72 bp ATAGGAGAATGTATCATCATCTTCATCTTCTACAAATaGTTGGGGGTTGGCTGTCCATACTTTAATCTGCTC +
Preference number: 6 (lower is better)
Translates to: IGECIIIFIFYK*LGVGCPYFNLL
Trigger: GAGCAGATTAAAGTATGGACAGCCAACCCCCAACAATTTGTAGAAGATGAAGATGATGATACATTCTCCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361565.9