RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IPO5 (Homo sapiens)

Ensembl gene IDs: ENSG00000065150

Ensembl transcript IDs: ENST00000261574.10, ENST00000357602.7, ENST00000403772.8, ENST00000421861.7, ENST00000460070.6, ENST00000463157.6, ENST00000468620.1, ENST00000469360.5, ENST00000470493.1, ENST00000471898.5, ENST00000473582.1, ENST00000475420.5, ENST00000479736.1, ENST00000480611.6, ENST00000480641.2, ENST00000481455.6, ENST00000481689.6, ENST00000482642.1, ENST00000485433.6, ENST00000489058.6, ENST00000490369.6, ENST00000490680.5, ENST00000491555.5, ENST00000493122.1, ENST00000493281.6, ENST00000493492.2, ENST00000496368.6, ENST00000497270.5, ENST00000631030.1, ENST00000651721.2

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATaGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: PQGFQELLQWSGRNP*KLHSATQRCSSCLW
Trigger: CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
3UTR CCA 90 bp CCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTaGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTT +
Preference number: 1 (lower is better)
Translates to: PWKLHSATQRCSSCL*LSRRMAYTQHYRSL
Trigger: AAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR GCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTaGTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGA +
Preference number: 1 (lower is better)
Translates to: RNPWKLHSATQRCSS*LWLSRRMAYTQHYR
Trigger: TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR GCA 90 bp TGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTaGTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAA +
Preference number: 1 (lower is better)
Translates to: WSGRNPWKLHSATQR*SSCLWLSRRMAYTQ
Trigger: TTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR CCA 90 bp CTGCAACACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATaGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAA +
Preference number: 1 (lower is better)
Translates to: LQHSAALPACGSPEE*PTHNTTDLFCSKTK
Trigger: TTTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR GCA 90 bp GCCTACATTGCTCTAGCTGATTGGCATCAGTACATGAATCGGCTTTaGAGATGCTACATAAGAAAGCAGAAAGGGGTTGTCTTGACACAC +
Preference number: 1 (lower is better)
Translates to: AYIALADWHQYMNRL*RCYIRKQKGVVLTH
Trigger: GTGTGTCAAGACAACCCCTTTCTGCTTTCTTATGTAGCATCTGCAAAGCCGATTCATGTACTGATGCCAATCAGCTAGAGCAATGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR TCA 90 bp CCAAATATTACCACACATTACAAGAGCCCACAGGTATTCATCCACTaGACACAAGGACTGCGCAGGTGGAGTCATTTAATATGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: PNITTHYKSPQVFIH*TQGLRRWSHLICCF
Trigger: AAAGCAGCATATTAAATGACTCCACCTGCGCAGTCCTTGTGTTCAGTGGATGAATACCTGTGGGCTCTTGTAATGTGTGGTAATATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR GCA 90 bp ACTCCAATTACCTCTTTGCTTTTCTGCTTTTATCAAGGAGGATGCTaGCAGTCTGCATCTAACAGAGCGCTTCTTTCAGAGCTCTTAGAA +
Preference number: 1 (lower is better)
Translates to: TPITSLLFCFYQGGC*QSASNRALLSELLE
Trigger: TTCTAAGAGCTCTGAAAGAAGCGCTCTGTTAGATGCAGACTGGCAGCATCCTCCTTGATAAAAGCAGAAAAGCAAAGAGGTAATTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR TCA 90 bp TTCTACCCTACAGAAAGACTCACACTCCCAATTCACAATGAACACTaGATGCAGAGCAATTTGTGTGAACACACATCTACGCTGAGTAAC +
Preference number: 1 (lower is better)
Translates to: FYPTERLTLPIHNEH*MQSNLCEHTSTLSN
Trigger: GTTACTCAGCGTAGATGTGTGTTCACACAAATTGCTCTGCATTCAGTGTTCATTGTGAATTGGGAGTGTGAGTCTTTCTGTAGGGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
3UTR TCA 90 bp TCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAACTTaGTTCAACTCCAATTACCTCTTTGCTTTTCTGCTTTTATCAAGG +
Preference number: 1 (lower is better)
Translates to: SCHTNSIYYQPSLLT*FNSNYLFAFLLLSR
Trigger: CCTTGATAAAAGCAGAAAAGCAAAGAGGTAATTGGAGTTGAATCAAGTTAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR GCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATCAGCGCTGCTCTTCCTaGTTGTGGCTCTCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHQRCSS*LWLSRR
Trigger: TCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTG...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
3UTR CAA 90 bp AATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTaGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCT +
Preference number: 2 (lower is better)
Translates to: NPWKLHSATQRCSSC*WLSRRMAYTQHYRS
Trigger: AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR-3UTR TCA 90 bp TATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCAAACGCAGAGCAATTTGTGTaGACACACATCTACGCTGAG +
Preference number: 2 (lower is better)
Translates to: YAALLDSEASGQWCCAANAEQFV*THIYAE
Trigger: CTCAGCGTAGATGTGTGTTCACACAAATTGCTCTGC...GTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR CCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATGGCTCTCCAGAAGAATaGCCTACACACAACACTACC +
Preference number: 2 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHGSPEE*PTHNTT
Trigger: GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCC...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
3UTR-3UTR CCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCTGCTCTTCCTGCTTGTaGCTCTCCAGAAGAATGGCC +
Preference number: 2 (lower is better)
Translates to: AGYTNRKIVFSASYRRASCSSCL*LSRRMA
Trigger: GGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
3UTR-3UTR CCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGTGCTCTTCCTGCTTGTaGCTCTCCAGAAGAATGGCC +
Preference number: 2 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQCSSCL*LSRRMA
Trigger: GGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR-3UTR CCA 90 bp TTAATATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCGGTCTACTGGTTTGCTaGGTAGGAGGCTTCTTTCTA +
Preference number: 2 (lower is better)
Translates to: LICCFARFGSLRAMVLCCGLLVC*VGGFFL
Trigger: TAGAAAGAAGCCTCCTACCCAGCAAACCAGTAGACC...GCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR GCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTATTGGGTCTACTGGTTTaGTGGGTAGGAGGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLLGLLV*WVGGFF
Trigger: AAAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAA...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR TCA 90 bp TTTACTGATGGTTCTGTCAAACTACAACTCCAGAGTTATAAGGTTGCCTCTCATCAAGCCAGACAGTACTaGGTTTTTACACAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: FTDGSVKLQLQSYKVASHQARQY*VFTQAS
Trigger: AGAGGCTTGTGTAAAAACTCAGTACTGTCTGGCTTG...ATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCATCAGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR TCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACAGACCACACTGTCATCTaGAATTCTGCAGGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTDHTVI*NSAGVP
Trigger: TGGCACACCTGCAGAATTTCAGATGACAGTGTGGTC...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR CCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCCAGGAACTCCTTCAGTaGTCTGGTAGAAATCCATGG +
Preference number: 2 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSQELLQ*SGRNPW
Trigger: CCATGGATTTCTACCAGACCACTGAAGGAGTTCCTG...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR GCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAAATCGGCTTTGCAGATaGTACATAAGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLNRLCR*YIRKQK
Trigger: TTTCTGCTTTCTTATGTAGCATCTGCAAAGCCGATT...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR GCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCACAATGAACACTGAATaGAGAGCAATTTGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSTMNTE*RAICVN
Trigger: GTTCACACAAATTGCTCTGCATTCAGTGTTCATTGT...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR GCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACAATGGTAAAAACTCGATaGTTAAGTCTGAATTGCACA +
Preference number: 2 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTMVKTR*LSLNCT
Trigger: TGTGCAATTCAGACTTAAGCATCGAGTTTTTACCAT...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR CCA 72 bp CTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTaGCTCTCCAGAAGAATGGCCTACACACAACACTAC +
Preference number: 3 (lower is better)
Translates to: LHSATQRCSSCL*LSRRMAYTQHY
Trigger: GTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR GCA 72 bp TGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTaGTTGTGGCTCTCCAGAAGAATGGCCTACACACAA +
Preference number: 3 (lower is better)
Translates to: WKLHSATQRCSS*LWLSRRMAYTQ
Trigger: TTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR GCA 72 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTaGTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCC +
Preference number: 3 (lower is better)
Translates to: RNPWKLHSATQR*SSCLWLSRRMA
Trigger: GGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR GCA 72 bp ACACAAGGACTGCGCAGGTGGAGTCATTTAATATGCTaGTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTG +
Preference number: 3 (lower is better)
Translates to: TQGLRRWSHLIC*FARFGSLRAMV
Trigger: CACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATATTAAATGACTCCACCTGCGCAGTCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR CCA 72 bp AGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATaGCCTACACACAACACTACCGATCTCTTTTGCTCA +
Preference number: 3 (lower is better)
Translates to: SAALPACGSPEE*PTHNTTDLFCS
Trigger: TGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
3UTR TCA 72 bp ACCACACATTACAAGAGCCCACAGGTATTCATCCACTaGACACAAGGACTGCGCAGGTGGAGTCATTTAATA +
Preference number: 3 (lower is better)
Translates to: TTHYKSPQVFIH*TQGLRRWSHLI
Trigger: TATTAAATGACTCCACCTGCGCAGTCCTTGTGTTCAGTGGATGAATACCTGTGGGCTCTTGTAATGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR GCA 72 bp TTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTaGTGCAAACGTAAAATATATTTGAAGGGCATCTGC +
Preference number: 3 (lower is better)
Translates to: FARFGSLRAMVL*CKRKIYLKGIC
Trigger: GCAGATGCCCTTCAAATATATTTTACGTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR GCA 72 bp GCTCTAGCTGATTGGCATCAGTACATGAATCGGCTTTaGAGATGCTACATAAGAAAGCAGAAAGGGGTTGTC +
Preference number: 3 (lower is better)
Translates to: ALADWHQYMNRL*RCYIRKQKGVV
Trigger: GACAACCCCTTTCTGCTTTCTTATGTAGCATCTGCAAAGCCGATTCATGTACTGATGCCAATCAGCTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR CAA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTATTTGGGTCTACTGGTTaGCTGGGTAGGAGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLFGSTG*LGRRLL
Trigger: AAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAAA...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR TCA 72 bp GGGCAATGGTGTTGTGCTGCAAACGTAAAATATATTTaGAGGGCATCTGCTAACAAGGAAACCATCTGTATG +
Preference number: 3 (lower is better)
Translates to: GQWCCAANVKYI*RASANKETICM
Trigger: CATACAGATGGTTTCCTTGTTAGCAGATGCCCTTCAAATATATTTTACGTTTGCAGCACAACACCATTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR-3UTR CAA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCGAAGGTAGGAGGTTCTaGCTCCCAAAGTGCTTAGCA +
Preference number: 3 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSEGRRF*LPKCLA
Trigger: TGCTAAGCACTTTGGGAGCAAGAACCTCCTACCTTC...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR TCA 72 bp ACTAACAGCATTTACTACCAACCTTCCCTATTAACTTaGTTCAACTCCAATTACCTCTTTGCTTTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: TNSIYYQPSLLT*FNSNYLFAFLL
Trigger: AAGCAGAAAAGCAAAGAGGTAATTGGAGTTGAATCAAGTTAATAGGGAAGGTTGGTAGTAAATGCTGTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACGTCGCGCTCTCCAGTaGCTCACGCCTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTRRALQ*LTPGAY
Trigger: ATAAGCCCCAGGCGTGAGTCACTGGAGAGCGCGACG...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS-3UTR GCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTCGGGGAGGTAACTGGTaGCAGGCGCCGCGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISRGGNW*QAPRQQ
Trigger: TTGCTGCCGCGGCGCCTGGCACCAGTTACCTCCCCG...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469360.5
CDS-3UTR GCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACCGCGGCCGCCGCCATTaGGCTTCTACTCACGGACTT +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNRGRRH*ASTHGL
Trigger: AAGTCCGTGAGTAGAAGCGCAATGGCGGCGGCCGCG...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS-3UTR CCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACATCAGGAGCTCCTGAATaGCGGCCTGCTGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTSGAPE*RPAAQD
Trigger: GTCCTGAGCAGCAGGCCGCCATTCAGGAGCTCCTGA...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACCCTCCCCCAGGGCTGTaGACTCAGGGCGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHPPPGL*TQGAPS
Trigger: GGAAGGGGCGCCCTGAGTCCACAGCCCTGGGGGAGG...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS-3UTR TCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACGAGTTCAGGAGCTCCTaGATGGCGGCCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNEFRSS*MAACCS
Trigger: TGAGCAGCAGGCCGCCATTCAGGAGCTCCTGAACTC...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATGAGTTCAGGAGCTCCTaGATGGCGGCCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDEFRSS*MAACCS
Trigger: TGAGCAGCAGGCCGCCATTCAGGAGCTCCTGAACTC...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCATGCAGCTGCTTGCCTaGCTTCTGGGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTMQLLA*LLGCCH
Trigger: GTGACAACAGCCCAGAAGTCAGGCAAGCAGCTGCAT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTGAGTTCAGGAGCTCCTaGATGGCGGCCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSEFRSS*MAACCS
Trigger: TGAGCAGCAGGCCGCCATTCAGGAGCTCCTGAACTC...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGAAATGAGGGCAGCAGCTaGATGGGCCTGCACACGTTG +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRNEGSS*MGLHTL
Trigger: CAACGTGTGCAGGCCCATGCAGCTGCTGCCCTCATT...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACATGGATTCCGCTGCTaGCACTCGAACACCATCGTG +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTHGFRC*HSNTIV
Trigger: CACGATGGTGTTCGAGTGGCAGCAGCGGAATCCATG...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCCCCGGAACCACTGTaGTCAGAGCTGTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHSPEPL*SELFPA
Trigger: AGCCGGGAACAGCTCTGACCACAGTGGTTCCGGGGA...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCAGGAGCTCCTGAATaGCGGCCTGCTGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHSGAPE*RPAAQD
Trigger: GTCCTGAGCAGCAGGCCGCCATTCAGGAGCTCCTGA...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCCAGTCTCAGAGAGGGTaGCGATCACTTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTQSQRG*RSLQGQ
Trigger: TTGCCCTTGAAGTGATCGTCACCCTCTCTGAGACTG...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCAAACTGGGCCTGCACACGTTaGTTGCCTTGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: YAALLDSEASGQWCCAANWACTR*LPWSSM
Trigger: CATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCA...GTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCCTGCTGCTCAGGACTaGGCTGTGCTATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSPAAQD*AVLCTQ
Trigger: CTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGG...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCCTGCTGCTCAGGACTaGGCTGTGCTATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPAPAAQD*AVLCTQ
Trigger: CTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCCCTGCTGCTCAGGACTaGGCTGTGCTATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCPAAQD*AVLCTQ
Trigger: CTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGG...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCTGGTCTTCCATGGTCTaGAGCAGAGCTGCAATCACC +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTWSSMV*SRAAIT
Trigger: GGTGATTGCAGCTCTGCTGCAGACCATGGAAGACCA...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTAATGAGGGCAGCAGCTaGATGGGCCTGCACACGTTG +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPANEGSS*MGLHTL
Trigger: CAACGTGTGCAGGCCCATGCAGCTGCTGCCCTCATT...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGACATGGATTCCGCTGCTaGCACTCGAACACCATCGTG +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRHGFRC*HSNTIV
Trigger: CACGATGGTGTTCGAGTGGCAGCAGCGGAATCCATG...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACCCTACACATGGGTCCTaGAAAGGCTTCTCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNPTHGS*KGFSPE
Trigger: TTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGG...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCTCAGGAGCTCCTGAATaGCGGCCTGCTGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLSGAPE*RPAAQD
Trigger: GTCCTGAGCAGCAGGCCGCCATTCAGGAGCTCCTGA...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCCCACATTGTCGGGGCTaGGCAGGTTTCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRPHCRG*AGFPGA
Trigger: TGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGG...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGACAGTCTCAGAGAGGGTaGCGATCACTTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRQSQRG*RSLQGQ
Trigger: TTGCCCTTGAAGTGATCGTCACCCTCTCTGAGACTG...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTTGGGCCTGCACACGTTaGTTGCCTTGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSWACTR*LPWSSM
Trigger: CATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCA...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGATGCAGCTGCTTGCCTaGCTTCTGGGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWMQLLA*LLGCCH
Trigger: GTGACAACAGCCCAGAAGTCAGGCAAGCAGCTGCAT...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTAATGAGGGCAGCAGCTaGATGGGCCTGCACACGTTG +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSINEGSS*MGLHTL
Trigger: CAACGTGTGCAGGCCCATGCAGCTGCTGCCCTCATT...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCAAACCTCAGGACTGAGCTGTaGTATGCACTCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: YAALLDSEASGQWCCAANLRTEL*YALSPQ
Trigger: CTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAG...GTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGCAGCGCTGCTCTTCCTaGTTGTGGCTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLQRCSS*LWLSRR
Trigger: TCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTG...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTCAGCGCTGCTCTTCCTaGTTGTGGCTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISQRCSS*LWLSRR
Trigger: TCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTG...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTCTGCAACACAGCGCTaGTCTTCCTGCTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWSATQR*SSCLWL
Trigger: GAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGACGTCTTAGGAGAACGGCGGCCATTTGTCTAGCCTCTTCAGCAGCTGTTGTACCAGACACACACCTCTaGCTGTTTCCGGACCACATT +
Preference number: 4 (lower is better)
Translates to: RRLRRTAAICLASSAAVVPDTHL*LFPDHI
Trigger: AATGTGGTCCGGAAACAGGCAGAGGTGTGTGTCTGG...TACAACAGCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTCCTAAGACGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR CCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCAGTTGTGCCTACACATaGGTCCTGGAAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTSCAYT*VLERLL
Trigger: GAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTGCCTTGGTCTTCCATaGTCTGCAGCAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNCLGLP*SAAELQ
Trigger: TTGCAGCTCTGCTGCAGACCATGGAAGACCAAGGCA...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACATCCCCATTGTCTGTCTaGCCATGGTCTATGTGGACA +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTSPLSV*PWSMWT
Trigger: TGTCCACATAGACCATGGCCAGACAGACAATGGGGA...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACAGGCTCTCCAGAAGAATaGCCTACACACAACACTACC +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTGSPEE*PTHNTT
Trigger: GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCC...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATTGCTCTTCCTGCTTGTaGCTCTCCAGAAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDCSSCL*LSRRMA
Trigger: GGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACAGAGGAATGTGATCTTTaGCTGGCCTGGGATATTCTC +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTEECDL*LAWDIL
Trigger: GAGAATATCCCAGGCCAGTCAAAGATCACATTCCTC...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGACGTCTTAGGAGAACGGCGGCCATTTGTCTAGCCTCTTCAGCAGCTGTTGTACTCTTGATGGCAGTCTaGACATCAGAGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: RRLRRTAAICLASSAAVVLLMAV*TSEGSA
Trigger: AGCACTTCCCTCTGATGTTCAGACTGCCATCAAGAG...TACAACAGCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTCCTAAGACGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR TCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTTGGGCCTGCACACGTTaGTTGCCTTGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAWACTR*LPWSSM
Trigger: CATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCA...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCTGGGCCTGCACACGTTaGTTGCCTTGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASWACTR*LPWSSM
Trigger: CATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCA...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCCATTCTGGCCCATGCTaGGATCATGTAAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTHSGPC*DHVRDL
Trigger: CAGATCTCTTACATGATCTCAGCATGGGCCAGAATG...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTATGCAGCTGCTTGCCTaGCTTCTGGGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAMQLLA*LLGCCH
Trigger: GTGACAACAGCCCAGAAGTCAGGCAAGCAGCTGCAT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCCTGCTGCTCAGGACTaGGCTGTGCTATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQPAAQD*AVLCTQ
Trigger: CTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGG...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCCAGGTATTCATCCACTaGACACAAGGACTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCQVFIH*TQGLRR
Trigger: CCTGCGCAGTCCTTGTGTTCAGTGGATGAATACCTG...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCAGGGAAAACAGTTGTaGCTACACATGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDQGKQL*LHMGPG
Trigger: TCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTG...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTTTCCTCTGTTGAGTaGCGCAAGTATCCTGATCAG +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTLSSVE*RKYPDQ
Trigger: CTGATCAGGATACTTGCGGCACTCAACAGAGGAAAG...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGAAGGGCAAGCTGGCGTTaGATATTGTTGAGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRRASWR*ILLRLV
Trigger: CACTAGCCTCAACAATATGCAACGCCAGCTTGCCCT...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCCACGGCATTACAGGCTaGATACCTTACTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTHGITG*IPYSWM
Trigger: CATCCAAGAGTAAGGTATGCAGCCTGTAATGCCGTG...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTTGGTCTTCCATGGTCTaGAGCAGAGCTGCAATCACC +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGWSSMV*SRAAIT
Trigger: GGTGATTGCAGCTCTGCTGCAGACCATGGAAGACCA...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTGGTCTTCCATGGTCTaGAGCAGAGCTGCAATCACC +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWWSSMV*SRAAIT
Trigger: GGTGATTGCAGCTCTGCTGCAGACCATGGAAGACCA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACCCTGCACACGTTGATTaGCTTGGTCTTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNPAHVD*LGLPWS
Trigger: AGACCATGGAAGACCAAGGCAATCAACGTGTGCAGG...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCATGGATTCCGCTGCTaGCACTCGAACACCATCGTG +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSIHGFRC*HSNTIV
Trigger: CACGATGGTGTTCGAGTGGCAGCAGCGGAATCCATG...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGCTCAGGACTGAGCTGTaGTATGCACTCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLLRTEL*YALSPQ
Trigger: CTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAG...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCTCAGGACTGAGCTGTaGTATGCACTCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPALRTEL*YALSPQ
Trigger: CTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCAGCGCTGCTCTTCCTaGTTGTGGCTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSIQRCSS*LWLSRR
Trigger: TCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTG...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCATGGAAACTCCATTCTaGAACACAGCGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTMETPF*NTALLF
Trigger: GAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCAT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTTCCCCGGAACCACTGTaGTCAGAGCTGTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTSPEPL*SELFPA
Trigger: AGCCGGGAACAGCTCTGACCACAGTGGTTCCGGGGA...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTGCCTTGGTCTTCCATaGTCTGCAGCAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCCLGLP*SAAELQ
Trigger: TTGCAGCTCTGCTGCAGACCATGGAAGACCAAGGCA...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGCCTTGGTCTTCCATaGTCTGCAGCAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPACLGLP*SAAELQ
Trigger: TTGCAGCTCTGCTGCAGACCATGGAAGACCAAGGCA...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCCCCATTGTCTGTCTaGCCATGGTCTATGTGGACA +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRSPLSV*PWSMWT
Trigger: TGTCCACATAGACCATGGCCAGACAGACAATGGGGA...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACCCTTTCCCCTTCAGGTaGGCGGGTTATACCAATAGA +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNPFPFR*AGYTNR
Trigger: TCTATTGGTATAACCCGCCCACCTGAAGGGGAAAGG...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
3UTR CAA 72 bp AAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTaGTGGCTCTCCAGAAGAATGGCCTACACACAACAC +
Preference number: 4 (lower is better)
Translates to: KLHSATQRCSSC*WLSRRMAYTQH
Trigger: GTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTGTGCCGCAAGTATCCTaGTCAGGGAAAACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISVPQVS*SGKTVV
Trigger: CACAACTGTTTTCCCTGATCAGGATACTTGCGGCAC...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGACTTGTAAGAGGAATGTaGTCTTTGACTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRLVRGM*SLTGLG
Trigger: TCCCAGGCCAGTCAAAGATCACATTCCTCTTACAAG...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGCTCTTGATGGCAGTCTaGACATCAGAGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWLLMAV*TSEGSA
Trigger: AGCACTTCCCTCTGATGTTCAGACTGCCATCAAGAG...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTCTTGATGGCAGTCTaGACATCAGAGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSLLMAV*TSEGSA
Trigger: AGCACTTCCCTCTGATGTTCAGACTGCCATCAAGAG...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGCTCTTGATGGCAGTCTaGACATCAGAGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLLLMAV*TSEGSA
Trigger: AGCACTTCCCTCTGATGTTCAGACTGCCATCAAGAG...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCTCTTGATGGCAGTCTaGACATCAGAGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPALLMAV*TSEGSA
Trigger: AGCACTTCCCTCTGATGTTCAGACTGCCATCAAGAG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGATGCAGCTGCTTGCCTaGCTTCTGGGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQMQLLA*LLGCCH
Trigger: GTGACAACAGCCCAGAAGTCAGGCAAGCAGCTGCAT...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTAATATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCGACCACACTGTCATCTaGAATTCTGCAGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LICCFARFGSLRAMVLCCDHTVI*NSAGVP
Trigger: TGGCACACCTGCAGAATTTCAGATGACAGTGTGGTC...GCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCCTCATAGGTTTCCTCTaGCTGTTTCCGGACCACATT +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLLIGFL*LFPDHI
Trigger: AATGTGGTCCGGAAACAGGCAGAGGAAACCTATGAG...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTAGGGCAAGCTGGCGTTaGATATTGTTGAGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSRASWR*ILLRLV
Trigger: CACTAGCCTCAACAATATGCAACGCCAGCTTGCCCT...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGTGGTCTTCCATGGTCTaGAGCAGAGCTGCAATCACC +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLWSSMV*SRAAIT
Trigger: GGTGATTGCAGCTCTGCTGCAGACCATGGAAGACCA...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCCTGCACACGTTGATTaGCTTGGTCTTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSPAHVD*LGLPWS
Trigger: AGACCATGGAAGACCAAGGCAATCAACGTGTGCAGG...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTACCAGCAGGGGAAGTaGTTCTGTACAAAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLYQQGK*FCTKRA
Trigger: CGCCCTTTTTGTACAGAAGCACTTCCCCTGCTGGTA...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTCTCAGGACTGAGCTGTaGTATGCACTCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACLRTEL*YALSPQ
Trigger: CTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAG...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACTCTGCAACACAGCGCTaGTCTTCCTGCTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHSATQR*SSCLWL
Trigger: GAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGA...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACACTTCAAGGGCAAGCTaGCGTTGCATATTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNTSRAS*RCILLR
Trigger: CCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGT...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATACTTCAAGGGCAAGCTaGCGTTGCATATTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDTSRAS*RCILLR
Trigger: CCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGT...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCACTTCAAGGGCAAGCTaGCGTTGCATATTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLTSRAS*RCILLR
Trigger: CCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGT...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTCCCCATTGTCTGTCTaGCCATGGTCTATGTGGACA +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWSPLSV*PWSMWT
Trigger: TGTCCACATAGACCATGGCCAGACAGACAATGGGGA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTTGCTCTTCCTGCTTGTaGCTCTCCAGAAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSICSSCL*LSRRMA
Trigger: GGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCCAGTGACTCACGCCTaGGGCTTATTGTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGPVTHA*GLLCFL
Trigger: CAGAAAACACAATAAGCCCCAGGCGTGAGTCACTGG...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS-3UTR TCA 90 bp ATTTGTCTAGCCTCTTCAGCAGCTGTTGTATTTCTGATGGCTTGTAAGAGGAATCCACATTGTCGGGGCTaGGCAGGTTTCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ICLASSAAVVFLMACKRNPHCRG*AGFPGA
Trigger: TGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGG...ATTCCTCTTACAAGCCATCAGAAATACAACAGCTGCTGAAGAGGCTAGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR TCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTGAGGAATGTGATCTTTaGCTGGCCTGGGATATTCTC +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISEECDL*LAWDIL
Trigger: GAGAATATCCCAGGCCAGTCAAAGATCACATTCCTC...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTGAGGAATGTGATCTTTaGCTGGCCTGGGATATTCTC +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPAEECDL*LAWDIL
Trigger: GAGAATATCCCAGGCCAGTCAAAGATCACATTCCTC...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTGTAAGAGGAATGTaGTCTTTGACTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSLVRGM*SLTGLG
Trigger: TCCCAGGCCAGTCAAAGATCACATTCCTCTTACAAG...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGCTTGTAAGAGGAATGTaGTCTTTGACTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWLVRGM*SLTGLG
Trigger: TCCCAGGCCAGTCAAAGATCACATTCCTCTTACAAG...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCGCAGTCCCACATTTTaGGAGCTGACTGAATCAAAA +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDRSPTF*ELTESK
Trigger: TTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCG...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGCAGTATCGGCAACTaGTGCAATGGATGTCACAAC +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPACSIGN*CNGCHN
Trigger: GTTGTGACATCCATTGCATCAGTTGCCGATACTGCA...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCATTCTGGCCCATGCTaGGATCATGTAAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPAHSGPC*DHVRDL
Trigger: CAGATCTCTTACATGATCTCAGCATGGGCCAGAATG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTAAGGGACCATCAGTTTaGCAACCTGTTCGGTGTACT +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISKGPSV*QPVRCT
Trigger: AGTACACCGAACAGGTTGTCAAACTGATGGTCCCTT...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCGACCACACTGTCATCTaGAATTCTGCAGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASDHTVI*NSAGVP
Trigger: TGGCACACCTGCAGAATTTCAGATGACAGTGTGGTC...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTCTCATAGGTTTCCTCTaGCTGTTTCCGGACCACATT +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISLIGFL*LFPDHI
Trigger: AATGTGGTCCGGAAACAGGCAGAGGAAACCTATGAG...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTCATAGGTTTCCTCTaGCTGTTTCCGGACCACATT +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGLIGFL*LFPDHI
Trigger: AATGTGGTCCGGAAACAGGCAGAGGAAACCTATGAG...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTAGGGCAAGCTGGCGTTaGATATTGTTGAGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SFSGLVEIHGNSILQHSARASWR*ILLRLV
Trigger: CACTAGCCTCAACAATATGCAACGCCAGCTTGCCCT...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCCACGGCATTACAGGCTaGATACCTTACTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCHGITG*IPYSWM
Trigger: CATCCAAGAGTAAGGTATGCAGCCTGTAATGCCGTG...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGGGTCTGCAGCAGAGCTaGAATCACCTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLGLQQS*NHLLMK
Trigger: TTTCATGAGAAGGTGATTGCAGCTCTGCTGCAGACC...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTGGTCTGCAGCAGAGCTaGAATCACCTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGGLQQS*NHLLMK
Trigger: TTTCATGAGAAGGTGATTGCAGCTCTGCTGCAGACC...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTCCTGCACACGTTGATTaGCTTGGTCTTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACPAHVD*LGLPWS
Trigger: AGACCATGGAAGACCAAGGCAATCAACGTGTGCAGG...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCTACCAGCAGGGGAAGTaGTTCTGTACAAAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASYQQGK*FCTKRA
Trigger: CGCCCTTTTTGTACAGAAGCACTTCCCCTGCTGGTA...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCTACCAGCAGGGGAAGTaGTTCTGTACAAAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLYQQGK*FCTKRA
Trigger: CGCCCTTTTTGTACAGAAGCACTTCCCCTGCTGGTA...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTATGGAAACTCCATTCTaGAACACAGCGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGMETPF*NTALLF
Trigger: GAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCAT...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCATGGAAACTCCATTCTaGAACACAGCGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCMETPF*NTALLF
Trigger: GAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCAT...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTTGGGTCTACTGGTTTaGTGGGTAGGAGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWLGLLV*WVGGFF
Trigger: AAAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAATCCCCGGAACCACTGTaGTCAGAGCTGTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKSPEPL*SELFPA
Trigger: AGCCGGGAACAGCTCTGACCACAGTGGTTCCGGGGA...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTCCTACACATGGGTCCTaGAAAGGCTTCTCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTPTHGS*KGFSPE
Trigger: TTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGG...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCATCAGAGGGAAGTGCTaGATAGACTTCATCAAATGC +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTIRGKC*IDFIKC
Trigger: GCATTTGATGAAGTCTATCCAGCACTTCCCTCTGAT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGAAGGCCCCATAACCACTaGAAGGTATTGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRRPHNH*KVLLKF
Trigger: GAATTTCAGCAATACCTTCCAGTGGTTATGGGGCCT...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACTGCTCTTCCTGCTTGTaGCTCTCCAGAAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHCSSCL*LSRRMA
Trigger: GGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCAGGAACTCCTTCAGTaGTCTGGTAGAAATCCATGG +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPAQELLQ*SGRNPW
Trigger: CCATGGATTTCTACCAGACCACTGAAGGAGTTCCTG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCCAGGAACTCCTTCAGTaGTCTGGTAGAAATCCATGG +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCQELLQ*SGRNPW
Trigger: CCATGGATTTCTACCAGACCACTGAAGGAGTTCCTG...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATGGTCTACTGGTTTGCTaGGTAGGAGGCTTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHGLLVC*VGGFFL
Trigger: TAGAAAGAAGCCTCCTACCCAGCAAACCAGTAGACC...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTGGTCTACTGGTTTGCTaGGTAGGAGGCTTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISGLLVC*VGGFFL
Trigger: TAGAAAGAAGCCTCCTACCCAGCAAACCAGTAGACC...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCAAGGACTGCGCAGGTaGAGTCATTTAATATGCTGC +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPAQGLRR*SHLICC
Trigger: GCAGCATATTAAATGACTCCACCTGCGCAGTCCTTG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTACCACATTGTCGGGGCTaGGCAGGTTTCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLPHCRG*AGFPGA
Trigger: TGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGG...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACCAGTCTCAGAGAGGGTaGCGATCACTTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNQSQRG*RSLQGQ
Trigger: TTGCCCTTGAAGTGATCGTCACCCTCTCTGAGACTG...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCCATTCTGGCCCATGCTaGGATCATGTAAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLHSGPC*DHVRDL
Trigger: CAGATCTCTTACATGATCTCAGCATGGGCCAGAATG...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACAATACCAAAGCTTTGCTaGTCTCCAAGGTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTIPKLC*SPRFTN
Trigger: ATTTGTGAACCTTGGAGATCAGCAAAGCTTTGGTAT...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAGGGACCATCAGTTTaGCAACCTGTTCGGTGTACT +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLKGPSV*QPVRCT
Trigger: AGTACACCGAACAGGTTGTCAAACTGATGGTCCCTT...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTAAGGGACCATCAGTTTaGCAACCTGTTCGGTGTACT +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAKGPSV*QPVRCT
Trigger: AGTACACCGAACAGGTTGTCAAACTGATGGTCCCTT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTGCAGAGCAATTTGTGTaGACACACATCTACGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAAEQFV*THIYAE
Trigger: CTCAGCGTAGATGTGTGTTCACACAAATTGCTCTGC...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCAAGCCAGACAGTACTaGGTTTTTACACAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGQARQY*VFTQAS
Trigger: AGAGGCTTGTGTAAAAACTCAGTACTGTCTGGCTTG...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTATTGGCATCAGTACATaGATCGGCTTTGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSIGIST*IGFADA
Trigger: AGCATCTGCAAAGCCGATTCATGTACTGATGCCAAT...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATATTGGCATCAGTACATaGATCGGCTTTGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHIGIST*IGFADA
Trigger: AGCATCTGCAAAGCCGATTCATGTACTGATGCCAAT...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCATAGACTTCATCAAATaGAGAGGACAAGAGACGTCT +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTIDFIK*RGQETS
Trigger: AGACGTCTCTTGTCCTCTGCATTTGATGAAGTCTAT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCATTCCTGGCCAGTTCTaGCGCAATATCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLIPGQF*RNITNF
Trigger: AAAGTTTGTGATATTGCGGCAGAACTGGCCAGGAAT...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTTTGGAACAGTATCTaGAATCTCAACGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTLWNSI*NLNEGF
Trigger: AAATCCCTCGTTGAGATTGCAGATACTGTTCCAAAG...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGAGGGCAAGCTGGCGTTaGATATTGTTGAGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQRASWR*ILLRLV
Trigger: CACTAGCCTCAACAATATGCAACGCCAGCTTGCCCT...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCGCCTGCAACTGCATTaGTGTCAAAATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDRLQLH*CQNHHL
Trigger: AAGATGATGATTTTGACAGCAATGCAGTTGCAGGCG...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTACTCTCGCCTGCAACTaGATTGCTGTCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGTLACN*IAVKII
Trigger: GATGATTTTGACAGCAATGCAGTTGCAGGCGAGAGT...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACATGTTTAATTGCCTCGTaGATTTCTCCTTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: TALLFLLVALQKNGLHTTCLIAS*ISPSAI
Trigger: AATTGCGGAAGGAGAAATGCACGAGGCAATTAAACA...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATCTGCAACACAGCGCTaGTCTTCCTGCTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQSATQR*SSCLWL
Trigger: GAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCTTGGGTCTACTGGTTTaGTGGGTAGGAGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASLGLLV*WVGGFF
Trigger: AAAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAA...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTATCAAGGAGGATaGTGCCAGTCTGCATCTAAC +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLFYQGG*CQSASN
Trigger: GTTAGATGCAGACTGGCAGCATCCTCCTTGATAAAA...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGTTGTGCCTACACATaGGTCCTGGAAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRSCAYT*VLERLL
Trigger: GAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACT...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCCATCTATTAAATTCCTaGCCAGTTCTGCCGCAATAT +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTHLLNS*PVLPQY
Trigger: ATATTGCGGCAGAACTGGCCAGGAATTTAATAGATG...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTACTTCAAGGGCAAGCTaGCGTTGCATATTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFATSRAS*RCILLR
Trigger: CCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATGGCCATGGTCTATGTaGACAAATGAGGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRWPWSM*TNEVDN
Trigger: ATTGTCAACCTCATTTGTCCACATAGACCATGGCCA...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACTCCCCATTGTCTGTCTaGCCATGGTCTATGTGGACA +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHSPLSV*PWSMWT
Trigger: TGTCCACATAGACCATGGCCAGACAGACAATGGGGA...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCCAAGACAACCAGTGTaGAAGGACCTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSIPRQPV*KDLFNV
Trigger: AACGTTGAAGAGGTCCTTCCACACTGGTTGTCTTGG...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTCCAAGACAACCAGTGTaGAAGGACCTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACPRQPV*KDLFNV
Trigger: AACGTTGAAGAGGTCCTTCCACACTGGTTGTCTTGG...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTATCAGGAGCTCCTGAATaGCGGCCTGCTGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLSGAPE*RPAAQD
Trigger: GTCCTGAGCAGCAGGCCGCCATTCAGGAGCTCCTGA...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACCCTTTCCCCTTCAGGTaGGCGGGTTATACCAATAGA +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHPFPFR*AGYTNR
Trigger: TCTATTGGTATAACCCGCCCACCTGAAGGGGAAAGG...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTGGTCTACTGGTTTGCTaGGTAGGAGGCTTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSIGLLVC*VGGFFL
Trigger: TAGAAAGAAGCCTCCTACCCAGCAAACCAGTAGACC...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATATTGCTCTAGCTGATTaGCATCAGTACATGAATCGG +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDIALAD*HQYMNR
Trigger: CCGATTCATGTACTGATGCCAATCAGCTAGAGCAAT...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGACTAAACCAATATTTGTaGAGAGGGAGAATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRLNQYL*RGRMGR
Trigger: TCTCCCCATTCTCCCTCTCCACAAATATTGGTTTAG...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCAGCTGTTGTATTTCTaGTGGCTTGTAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPAQLLYF*WLVRGM
Trigger: CATTCCTCTTACAAGCCATCAGAAATACAACAGCTG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCCAGCTGTTGTATTTCTaGTGGCTTGTAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCQLLYF*WLVRGM
Trigger: CATTCCTCTTACAAGCCATCAGAAATACAACAGCTG...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCAGCTGTTGTATTTCTaGTGGCTTGTAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSQLLYF*WLVRGM
Trigger: CATTCCTCTTACAAGCCATCAGAAATACAACAGCTG...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTCGCAGTCCCACATTTTaGGAGCTGACTGAATCAAAA +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACRSPTF*ELTESK
Trigger: TTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCG...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTAGAGTTGCTTCCAAGTaGGGACGCAAATACTTTGGA +
Preference number: 4 (lower is better)
Translates to: SFSGLVEIHGNSILQHSARVASK*GRKYFG
Trigger: TCCAAAGTATTTGCGTCCTCACTTGGAAGCAACTCT...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCTGCAGTATCGGCAACTaGTGCAATGGATGTCACAAC +
Preference number: 4 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRCSIGN*CNGCHN
Trigger: GTTGTGACATCCATTGCATCAGTTGCCGATACTGCA...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTAGTCTCAGTTCTTTTTaGACCGCATTCTCAACGATG +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISSLSSF*TAFSTM
Trigger: CATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACT...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTAGTCTCAGTTCTTTTTaGACCGCATTCTCAACGATG +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPASLSSF*TAFSTM
Trigger: CATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACT...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCGCAGAGCAATTTGTGTaGACACACATCTACGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRAEQFV*THIYAE
Trigger: CTCAGCGTAGATGTGTGTTCACACAAATTGCTCTGC...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCATTCACAATGAACACTaGATGCAGAGCAATTTGTGT +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTIHNEH*MQSNLC
Trigger: ACACAAATTGCTCTGCATTCAGTGTTCATTGTGAAT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTACTCCCAATTCACAATaGACACTGAATGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSTPNSQ*TLNAEQ
Trigger: TTGCTCTGCATTCAGTGTTCATTGTGAATTGGGAGT...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTACTCCCAATTCACAATaGACACTGAATGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGTPNSQ*TLNAEQ
Trigger: TTGCTCTGCATTCAGTGTTCATTGTGAATTGGGAGT...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGACTCCCAATTCACAATaGACACTGAATGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWTPNSQ*TLNAEQ
Trigger: TTGCTCTGCATTCAGTGTTCATTGTGAATTGGGAGT...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTCAGGGAAAACAGTTGTaGCTACACATGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTQGKQL*LHMGPG
Trigger: TCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTG...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR GCA 90 bp AGACGTCTTAGGAGAACGGCGGCCATTTGTCTAGCCTCTTCAGCAGCTGTTGTAATAGACTTCATCAAATaGAGAGGACAAGAGACGTCT +
Preference number: 4 (lower is better)
Translates to: RRLRRTAAICLASSAAVVIDFIK*RGQETS
Trigger: AGACGTCTCTTGTCCTCTGCATTTGATGAAGTCTAT...TACAACAGCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTCCTAAGACGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR GCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGATTCCTGGCCAGTTCTaGCGCAATATCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWIPGQF*RNITNF
Trigger: AAAGTTTGTGATATTGCGGCAGAACTGGCCAGGAAT...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTATTCCTGGCCAGTTCTaGCGCAATATCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISIPGQF*RNITNF
Trigger: AAAGTTTGTGATATTGCGGCAGAACTGGCCAGGAAT...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCGCCTGCAACTGCATTaGTGTCAAAATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGRLQLH*CQNHHL
Trigger: AAGATGATGATTTTGACAGCAATGCAGTTGCAGGCG...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGCGCCTGCAACTGCATTaGTGTCAAAATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWRLQLH*CQNHHL
Trigger: AAGATGATGATTTTGACAGCAATGCAGTTGCAGGCG...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCGCCTGCAACTGCATTaGTGTCAAAATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPARLQLH*CQNHHL
Trigger: AAGATGATGATTTTGACAGCAATGCAGTTGCAGGCG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCACTCTCGCCTGCAACTaGATTGCTGTCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASTLACN*IAVKII
Trigger: GATGATTTTGACAGCAATGCAGTTGCAGGCGAGAGT...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCACTCTCGCCTGCAACTaGATTGCTGTCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLTLACN*IAVKII
Trigger: GATGATTTTGACAGCAATGCAGTTGCAGGCGAGAGT...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACGGTCTGCAGCAGAGCTaGAATCACCTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHGLQQS*NHLLMK
Trigger: TTTCATGAGAAGGTGATTGCAGCTCTGCTGCAGACC...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGGGTCTGCAGCAGAGCTaGAATCACCTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQGLQQS*NHLLMK
Trigger: TTTCATGAGAAGGTGATTGCAGCTCTGCTGCAGACC...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGAACATCTGATGCATCCTaGATGAATTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRTSDAS*MNFSFP
Trigger: TGGGAAGGAAAAATTCATGCAGGATGCATCAGATGT...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCACATCTGATGCATCCTaGATGAATTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLTSDAS*MNFSFP
Trigger: TGGGAAGGAAAAATTCATGCAGGATGCATCAGATGT...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCATCTTCATGTTTAATTaGCTCGTGCATTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AALPACGSPEEWPTHNTTIFMFN*LVHFSF
Trigger: GAAGGAGAAATGCACGAGGCAATTAAACATGAAGAT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAACAGCGCTGCTCTTCCTaGTTGTGGCTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKQRCSS*LWLSRR
Trigger: TCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTG...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCTTGGGTCTACTGGTTTaGTGGGTAGGAGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRLGLLV*WVGGFF
Trigger: AAAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAA...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCAAACACCTCTTTGCTTTTCTaGTTTTATCAAGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: YAALLDSEASGQWCCAANTSLLF*FYQGGC
Trigger: GCATCCTCCTTGATAAAAGCAGAAAAGCAAAGAGGT...GTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTAGTTGTGCCTACACATaGGTCCTGGAAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTSCAYT*VLERLL
Trigger: GAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACT...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTATCAGAGGGAAGTGCTaGATAGACTTCATCAAATGC +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISIRGKC*IDFIKC
Trigger: GCATTTGATGAAGTCTATCCAGCACTTCCCTCTGAT...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTCATTGAAGTCTGTCTaGGTCTTTAACAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLSLKSV*VFNKSC
Trigger: GCAGCTTTTGTTAAAGACCCAGACAGACTTCAATGA...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGCCCCATAACCACTaGAAGGTATTGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASRPHNH*KVLLKF
Trigger: GAATTTCAGCAATACCTTCCAGTGGTTATGGGGCCT...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTAGGCCCCATAACCACTaGAAGGTATTGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSIRPHNH*KVLLKF
Trigger: GAATTTCAGCAATACCTTCCAGTGGTTATGGGGCCT...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTGGCCATGGTCTATGTaGACAAATGAGGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWWPWSM*TNEVDN
Trigger: ATTGTCAACCTCATTTGTCCACATAGACCATGGCCA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCCAAGACAACCAGTGTaGAAGGACCTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQPRQPV*KDLFNV
Trigger: AACGTTGAAGAGGTCCTTCCACACTGGTTGTCTTGG...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCAGATTGGTATTGTTTaGGCCAAGAACAATTGGATG +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDQIGIV*AKNNWM
Trigger: CATCCAATTGTTCTTGGCCCAAACAATACCAATCTG...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AATAGCAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTGCCGCAAGTATCCTaGTCAGGGAAAACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: NSRQNSGPLRPTIFKISLVPQVS*SGKTVV
Trigger: CACAACTGTTTTCCCTGATCAGGATACTTGCGGCAC...CAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR TCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTGAGGAATGTGATCTTTaGCTGGCCTGGGATATTCTC +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTEECDL*LAWDIL
Trigger: GAGAATATCCCAGGCCAGTCAAAGATCACATTCCTC...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR TCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCCAGCTGTTGTATTTCTaGTGGCTTGTAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASQLLYF*WLVRGM
Trigger: CATTCCTCTTACAAGCCATCAGAAATACAACAGCTG...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACGATTGTGTTTCCATCTaGATAATCATGAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNDCVSI*IIMSSS
Trigger: TGAGCTACTCATGATTATTCAGATGGAAACACAATC...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGAGTTGCTTCCAAGTaGGGACGCAAATACTTTGGA +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHRVASK*GRKYFG
Trigger: TCCAAAGTATTTGCGTCCTCACTTGGAAGCAACTCT...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTTCCAGTCAGGATTTTaGAGCATTTGCATAATGTGT +
Preference number: 4 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNFQSGF*SICIMC
Trigger: ACACATTATGCAAATGCTTCAAAATCCTGACTGGAA...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCTACCTTACTCTTGGATaGGGATCCTGGAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLYLTLG*GSWRKS
Trigger: ACTTTTTCTCCAGGATCCTCATCCAAGAGTAAGGTA...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACTGCAGTATCGGCAACTaGTGCAATGGATGTCACAAC +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNCSIGN*CNGCHN
Trigger: GTTGTGACATCCATTGCATCAGTTGCCGATACTGCA...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TTAATATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCATACCAAAGCTTTGCTaGTCTCCAAGGTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: LICCFARFGSLRAMVLCCIPKLC*SPRFTN
Trigger: ATTTGTGAACCTTGGAGATCAGCAAAGCTTTGGTAT...GCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTTTCTGCGTATTTAAATaGGGCTGGACTACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAFCVFK*GWTTVF
Trigger: GAACACTGTAGTCCAGCCTCATTTAAATACGCAGAA...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTACATTGCTCTAGCTaGTTGGCATCAGTACATGAA +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSILHCSS*LASVHE
Trigger: TTCATGTACTGATGCCAATCAGCTAGAGCAATGTAG...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGCCTTCCCTATTAACTTaGTTCAACTCCAATTACCTC +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWPSLLT*FNSNYL
Trigger: GAGGTAATTGGAGTTGAATCAAGTTAATAGGGAAGG...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCATATATATCACTTGCTaGCATGCAAGACCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLIYITC*HARPLN
Trigger: ATTTAGGGGTCTTGCATGTCAGCAAGTGATATATAT...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAACAGGGAAAACAGTTGTaGCTACACATGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQQGKQL*LHMGPG
Trigger: TCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTG...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTCTTTCCTCTGTTGAGTaGCGCAAGTATCCTGATCAG +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTLSSVE*RKYPDQ
Trigger: CTGATCAGGATACTTGCGGCACTCAACAGAGGAAAG...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR GCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGAACATCAGAGGGAAGTaGTGGATAGACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLNIRGK*WIDFIK
Trigger: TTTGATGAAGTCTATCCAGCACTTCCCTCTGATGTT...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGCTTTGGAACAGTATCTaGAATCTCAACGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWLWNSI*NLNEGF
Trigger: AAATCCCTCGTTGAGATTGCAGATACTGTTCCAAAG...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTGTTTAATTGCCTCGTaGATTTCTCCTTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: FLLVALQKNGLHTTLPISCLIAS*ISPSAI
Trigger: AATTGCGGAAGGAGAAATGCACGAGGCAATTAAACA...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCACAATGAACACTGAATaGAGAGCAATTTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLTMNTE*RAICVN
Trigger: GTTCACACAAATTGCTCTGCATTCAGTGTTCATTGT...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTGGAGTCATTTAATATaGTGCTTTGCTAGATTCGGA +
Preference number: 4 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLWSHLI*CFARFG
Trigger: TCCGAATCTAGCAAAGCAGCATATTAAATGACTCCA...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTATCAGAGGGAAGTGCTaGATAGACTTCATCAAATGC +
Preference number: 4 (lower is better)
Translates to: SFSGLVEIHGNSILQHSAIRGKC*IDFIKC
Trigger: GCATTTGATGAAGTCTATCCAGCACTTCCCTCTGAT...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTATCAGAGGGAAGTGCTaGATAGACTTCATCAAATGC +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACIRGKC*IDFIKC
Trigger: GCATTTGATGAAGTCTATCCAGCACTTCCCTCTGAT...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCCATCTATTAAATTCCTaGCCAGTTCTGCCGCAATAT +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCHLLNS*PVLPQY
Trigger: ATATTGCGGCAGAACTGGCCAGGAATTTAATAGATG...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCGTTCCAAAACTAACTTaGTGCCTTTCTGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCVPKLT*CLSESA
Trigger: AGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAAC...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTCATTGAAGTCTGTCTaGGTCTTTAACAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWSLKSV*VFNKSC
Trigger: GCAGCTTTTGTTAAAGACCCAGACAGACTTCAATGA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTTCATTGAAGTCTGTCTaGGTCTTTAACAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSSLKSV*VFNKSC
Trigger: GCAGCTTTTGTTAAAGACCCAGACAGACTTCAATGA...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCAGATTGGTATTGTTTaGGCCAAGAACAATTGGATG +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGQIGIV*AKNNWM
Trigger: CATCCAATTGTTCTTGGCCCAAACAATACCAATCTG...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAACCTTTCCCCTTCAGGTaGGCGGGTTATACCAATAGA +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQPFPFR*AGYTNR
Trigger: TCTATTGGTATAACCCGCCCACCTGAAGGGGAAAGG...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CCA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTGAAGCCTCCGGGCAATaGTGTTGTGCTGCAAACGTA +
Preference number: 4 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFEASGQ*CCAANV
Trigger: TACGTTTGCAGCACAACACCATTGCCCGGAGGCTTC...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCATTGCTCTAGCTGATTaGCATCAGTACATGAATCGG +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLIALAD*HQYMNR
Trigger: CCGATTCATGTACTGATGCCAATCAGCTAGAGCAAT...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp AGACGTCTTAGGAGAACGGCGGCCATTTGTCTAGCCTCTTCAGCAGCTGTTGTATGGATGATGTACAACTaGTTCAAATTACCACTGCTT +
Preference number: 4 (lower is better)
Translates to: RRLRRTAAICLASSAAVVWMMYN*FKLPLL
Trigger: AAGCAGTGGTAATTTGAACCAGTTGTACATCATCCA...TACAACAGCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTCCTAAGACGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
3UTR CAA 72 bp TGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTaGTGCTGCAAACGTAAAATATATTTGAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: CFARFGSLRAMV*CCKRKIYLKGI
Trigger: GATGCCCTTCAAATATATTTTACGTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp AATAGCAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGCTTGTAAGAGGAATGTaGTCTTTGACTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: NSRQNSGPLRPTIFKISLLVRGM*SLTGLG
Trigger: TCCCAGGCCAGTCAAAGATCACATTCCTCTTACAAG...CAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR TCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTGATTGTGTTTCCATCTaGATAATCATGAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPADCVSI*IIMSSS
Trigger: TGAGCTACTCATGATTATTCAGATGGAAACACAATC...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTTCCAGTCAGGATTTTaGAGCATTTGCATAATGTGT +
Preference number: 4 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWFQSGF*SICIMC
Trigger: ACACATTATGCAAATGCTTCAAAATCCTGACTGGAA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGTACCTTACTCTTGGATaGGGATCCTGGAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQYLTLG*GSWRKS
Trigger: ACTTTTTCTCCAGGATCCTCATCCAAGAGTAAGGTA...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCATACCAAAGCTTTGCTaGTCTCCAAGGTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASIPKLC*SPRFTN
Trigger: ATTTGTGAACCTTGGAGATCAGCAAAGCTTTGGTAT...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGTTCTGCGTATTTAAATaGGGCTGGACTACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQFCVFK*GWTTVF
Trigger: GAACACTGTAGTCCAGCCTCATTTAAATACGCAGAA...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTAACACACATCTACGCTaGGTAACTGTTCTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFANTHLR*VTVLKA
Trigger: AGCTTTAAGAACAGTTACTCAGCGTAGATGTGTGTT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTACAGGTATTCATCCACTaGACACAAGGACTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLQVFIH*TQGLRR
Trigger: CCTGCGCAGTCCTTGTGTTCAGTGGATGAATACCTG...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATATATATATCACTTGCTaGCATGCAAGACCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHIYITC*HARPLN
Trigger: ATTTAGGGGTCTTGCATGTCAGCAAGTGATATATAT...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCATAGACTTCATCAAATaGAGAGGACAAGAGACGTCT +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASIDFIK*RGQETS
Trigger: AGACGTCTCTTGTCCTCTGCATTTGATGAAGTCTAT...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGAACATCAGAGGGAAGTaGTGGATAGACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLNIRGK*WIDFIK
Trigger: TTTGATGAAGTCTATCCAGCACTTCCCTCTGATGTT...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACATTCCTGGCCAGTTCTaGCGCAATATCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHIPGQF*RNITNF
Trigger: AAAGTTTGTGATATTGCGGCAGAACTGGCCAGGAAT...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCTTTGGAACAGTATCTaGAATCTCAACGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFALWNSI*NLNEGF
Trigger: AAATCCCTCGTTGAGATTGCAGATACTGTTCCAAAG...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTTTGGAACAGTATCTaGAATCTCAACGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLLWNSI*NLNEGF
Trigger: AAATCCCTCGTTGAGATTGCAGATACTGTTCCAAAG...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGACTGAGGAATAGTCTGTaGAACAATATTGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRLRNSL*NNIGMF
Trigger: AAACATACCAATATTGTTGCACAGACTATTCCTCAG...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTGAGGAATAGTCTGTaGAACAATATTGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDLRNSL*NNIGMF
Trigger: AAACATACCAATATTGTTGCACAGACTATTCCTCAG...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAACACGGCATTACAGGCTaGATACCTTACTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQHGITG*IPYSWM
Trigger: CATCCAAGAGTAAGGTATGCAGCCTGTAATGCCGTG...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAACCTGCACACGTTGATTaGCTTGGTCTTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKPAHVD*LGLPWS
Trigger: AGACCATGGAAGACCAAGGCAATCAACGTGTGCAGG...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCGCATTCTCAACGATGTaGTTCAGTGATGGCATAAAT +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLAFSTM*FSDGIN
Trigger: ATTTATGCCATCACTGAAGCACATCGTTGAGAATGC...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGATGTTCTTCAAGCTTTaGTTTCAATATACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLMFFKL*FQYTSQ
Trigger: CTGGGAGGTATATTGAAAGCAAAGCTTGAAGAACAT...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTACAATGAACACTGAATaGAGAGCAATTTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LVEIHGNSILQHSAALPATMNTE*RAICVN
Trigger: GTTCACACAAATTGCTCTGCATTCAGTGTTCATTGT...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp CAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATACAATGAACACTGAATaGAGAGCAATTTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QGFQELLQWSGRNPWKLHTMNTE*RAICVN
Trigger: GTTCACACAAATTGCTCTGCATTCAGTGTTCATTGT...ATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTCGGGCAATGGTGTTGTaGTGCAAACGTAAAATATAT +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACRAMVL*CKRKIY
Trigger: ATATATTTTACGTTTGCAGCACAACACCATTGCCCG...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTCGGGCAATGGTGTTGTaGTGCAAACGTAAAATATAT +
Preference number: 4 (lower is better)
Translates to: SFSGLVEIHGNSILQHSARAMVL*CKRKIY
Trigger: ATATATTTTACGTTTGCAGCACAACACCATTGCCCG...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCAATCGGCTTTGCAGATaGTACATAAGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCNRLCR*YIRKQK
Trigger: TTTCTGCTTTCTTATGTAGCATCTGCAAAGCCGATT...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTTGTCATCTGAAATTCTaGAGGTGTGCCATGATTTTA +
Preference number: 4 (lower is better)
Translates to: KIVFSASYRRASRNSFSGCHLKF*RCAMIL
Trigger: TAAAATCATGGCACACCTGCAGAATTTCAGATGACA...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGGTTCCAAAACTAACTTaGTGCCTTTCTGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLVPKLT*CLSESA
Trigger: AGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAAC...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTGTTCCAAAACTAACTTaGTGCCTTTCTGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAVPKLT*CLSESA
Trigger: AGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAAC...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTTCATTGAAGTCTGTCTaGGTCTTTAACAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACSLKSV*VFNKSC
Trigger: GCAGCTTTTGTTAAAGACCCAGACAGACTTCAATGA...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCATATTCTCCATGTCTTaGGTATCTAAAAGGGCTACT +
Preference number: 4 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCIFSMS*VSKRAT
Trigger: AGTAGCCCTTTTAGATACCCAAGACATGGAGAATAT...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAACCAAGACAACCAGTGTaGAAGGACCTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQPRQPV*KDLFNV
Trigger: AACGTTGAAGAGGTCCTTCCACACTGGTTGTCTTGG...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGATATTTTGGGCAGATTaGTATTGTTTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLIFWAD*YCLGQE
Trigger: TTCTTGGCCCAAACAATACCAATCTGCCCAAAATAT...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTATATTTTGGGCAGATTaGTATTGTTTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSIFWAD*YCLGQE
Trigger: TTCTTGGCCCAAACAATACCAATCTGCCCAAAATAT...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAGGCTCTCCAGAAGAATaGCCTACACACAACACTACC +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKGSPEE*PTHNTT
Trigger: GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCC...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTTGACTGGCCTGGGATATTCTCATAGGTTTCATCATGAGAAACTGTTTCGTGAGGAATGTGATCTTTaGCTGGCCTGGGATATTCTC +
Preference number: 4 (lower is better)
Translates to: SLTGLGYSHRFHHEKLFREECDL*LAWDIL
Trigger: GAGAATATCCCAGGCCAGTCAAAGATCACATTCCTC...ACGAAACAGTTTCTCATGATGAAACCTATGAGAATATCCCAGGCCAGTCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR TCA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTCTTGTAAGAGGAATGTaGTCTTTGACTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFLVRGM*SLTGLG
Trigger: TCCCAGGCCAGTCAAAGATCACATTCCTCTTACAAG...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTTGACTGGCCTGGGATATTCTCATAGGTTTCATCATGAGAAACTGTTTCGTCTTGTAAGAGGAATGTaGTCTTTGACTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLTGLGYSHRFHHEKLFRLVRGM*SLTGLG
Trigger: TCCCAGGCCAGTCAAAGATCACATTCCTCTTACAAG...ACGAAACAGTTTCTCATGATGAAACCTATGAGAATATCCCAGGCCAGTCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR TCA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCGATTGTGTTTCCATCTaGATAATCATGAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLDCVSI*IIMSSS
Trigger: TGAGCTACTCATGATTATTCAGATGGAAACACAATC...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACTACCTTACTCTTGGATaGGGATCCTGGAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNYLTLG*GSWRKS
Trigger: ACTTTTTCTCCAGGATCCTCATCCAAGAGTAAGGTA...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAACACACATCTACGCTaGGTAACTGTTCTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHNTHLR*VTVLKA
Trigger: AGCTTTAAGAACAGTTACTCAGCGTAGATGTGTGTT...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGATTCACAATGAACACTaGATGCAGAGCAATTTGTGT +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLIHNEH*MQSNLC
Trigger: ACACAAATTGCTCTGCATTCAGTGTTCATTGTGAAT...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTATTCACAATGAACACTaGATGCAGAGCAATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAIHNEH*MQSNLC
Trigger: ACACAAATTGCTCTGCATTCAGTGTTCATTGTGAAT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR TCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACCCTTCCCTATTAACTTaGTTCAACTCCAATTACCTC +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHPSLLT*FNSNYL
Trigger: GAGGTAATTGGAGTTGAATCAAGTTAATAGGGAAGG...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACATAGACTTCATCAAATaGAGAGGACAAGAGACGTCT +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHIDFIK*RGQETS
Trigger: AGACGTCTCTTGTCCTCTGCATTTGATGAAGTCTAT...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACGCATTCTCAACGATGTaGTTCAGTGATGGCATAAAT +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHAFSTM*FSDGIN
Trigger: ATTTATGCCATCACTGAAGCACATCGTTGAGAATGC...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCCATGGATTCCGCTGCTaGCACTCGAACACCATCGTG +
Preference number: 4 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSHGFRC*HSNTIV
Trigger: CACGATGGTGTTCGAGTGGCAGCAGCGGAATCCATG...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGATGTTCTTCAAGCTTTaGTTTCAATATACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLMFFKL*FQYTSQ
Trigger: CTGGGAGGTATATTGAAAGCAAAGCTTGAAGAACAT...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTATGTTCTTCAAGCTTTaGTTTCAATATACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAMFFKL*FQYTSQ
Trigger: CTGGGAGGTATATTGAAAGCAAAGCTTGAAGAACAT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACTGTTTAATTGCCTCGTaGATTTCTCCTTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHCLIAS*ISPSAI
Trigger: AATTGCGGAAGGAGAAATGCACGAGGCAATTAAACA...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGATCTTCATGTTTAATTaGCTCGTGCATTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLIFMFN*LVHFSF
Trigger: GAAGGAGAAATGCACGAGGCAATTAAACATGAAGAT...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTATCTTCATGTTTAATTaGCTCGTGCATTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VEIHGNSILQHSAALPACIFMFN*LVHFSF
Trigger: GAAGGAGAAATGCACGAGGCAATTAAACATGAAGAT...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCTCTGCAACACAGCGCTaGTCTTCCTGCTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSSATQR*SSCLWL
Trigger: GAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGA...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTAGTCATTTAATATGCTaGTTTGCTAGATTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSISHLIC*FARFGS
Trigger: GCTTCCGAATCTAGCAAAGCAGCATATTAAATGACT...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTAAACATATCTGTCTCTaGCTGTTTCCGGACCACATT +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTKHICL*LFPDHI
Trigger: AATGTGGTCCGGAAACAGGCAGAGACAGATATGTTT...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCATCTATTAAATTCCTaGCCAGTTCTGCCGCAATAT +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQHLLNS*PVLPQY
Trigger: ATATTGCGGCAGAACTGGCCAGGAATTTAATAGATG...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTATATTCTCCATGTCTTaGGTATCTAAAAGGGCTACT +
Preference number: 4 (lower is better)
Translates to: LVALQKNGLHTTLPISFAIFSMS*VSKRAT
Trigger: AGTAGCCCTTTTAGATACCCAAGACATGGAGAATAT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACTGGCCATGGTCTATGTaGACAAATGAGGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNWPWSM*TNEVDN
Trigger: ATTGTCAACCTCATTTGTCCACATAGACCATGGCCA...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTCAGGAACTCCTTCAGTaGTCTGGTAGAAATCCATGG +
Preference number: 4 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFQELLQ*SGRNPW
Trigger: CCATGGATTTCTACCAGACCACTGAAGGAGTTCCTG...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp AGCTTAAAGTGGAAGATGGTAAAAACTCGATGCTTAAGTCTGAATTGCACAAGGGAGGAATGTGATCTTTaGCTGGCCTGGGATATTCTC +
Preference number: 4 (lower is better)
Translates to: SLKWKMVKTRCLSLNCTREECDL*LAWDIL
Trigger: GAGAATATCCCAGGCCAGTCAAAGATCACATTCCTC...CCTTGTGCAATTCAGACTTAAGCATCGAGTTTTTACCATCTTCCACTTTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAACGCAGTCCCACATTTTaGGAGCTGACTGAATCAAAA +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKRSPTF*ELTESK
Trigger: TTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCG...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAAGAGTTGCTTCCAAGTaGGGACGCAAATACTTTGGA +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKRVASK*GRKYFG
Trigger: TCCAAAGTATTTGCGTCCTCACTTGGAAGCAACTCT...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATACCTTACTCTTGGATaGGGATCCTGGAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQYLTLG*GSWRKS
Trigger: ACTTTTTCTCCAGGATCCTCATCCAAGAGTAAGGTA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATTCTGCGTATTTAAATaGGGCTGGACTACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQFCVFK*GWTTVF
Trigger: GAACACTGTAGTCCAGCCTCATTTAAATACGCAGAA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp AGCTTAAAGTGGAAGATGGTAAAAACTCGATGCTTAAGTCTGAATTGCACAAGGGCAGAGCAATTTGTGTaGACACACATCTACGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLKWKMVKTRCLSLNCTRAEQFV*THIYAE
Trigger: CTCAGCGTAGATGTGTGTTCACACAAATTGCTCTGC...CCTTGTGCAATTCAGACTTAAGCATCGAGTTTTTACCATCTTCCACTTTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTCTGAGGAATAGTCTGTaGAACAATATTGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: SFSGLVEIHGNSILQHSALRNSL*NNIGMF
Trigger: AAACATACCAATATTGTTGCACAGACTATTCCTCAG...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGAGGAATAGTCTGTaGAACAATATTGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: RASRNSFSGLVEIHGNSILRNSL*NNIGMF
Trigger: AAACATACCAATATTGTTGCACAGACTATTCCTCAG...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAACTCTCGCCTGCAACTaGATTGCTGTCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKTLACN*IAVKII
Trigger: GATGATTTTGACAGCAATGCAGTTGCAGGCGAGAGT...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AGCTTAAAGTGGAAGATGGTAAAAACTCGATGCTTAAGTCTGAATTGCACAAGGCACGGCATTACAGGCTaGATACCTTACTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: SLKWKMVKTRCLSLNCTRHGITG*IPYSWM
Trigger: CATCCAAGAGTAAGGTATGCAGCCTGTAATGCCGTG...CCTTGTGCAATTCAGACTTAAGCATCGAGTTTTTACCATCTTCCACTTTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACGCATTCTCAACGATGTaGTTCAGTGATGGCATAAAT +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNAFSTM*FSDGIN
Trigger: ATTTATGCCATCACTGAAGCACATCGTTGAGAATGC...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACACATCTGATGCATCCTaGATGAATTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNTSDAS*MNFSFP
Trigger: TGGGAAGGAAAAATTCATGCAGGATGCATCAGATGT...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGATGTTCTTCAAGCTTTaGTTTCAATATACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQMFFKL*FQYTSQ
Trigger: CTGGGAGGTATATTGAAAGCAAAGCTTGAAGAACAT...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TTTACTGATGGTTCTGTCAAACTACAACTCCAGAGTTATAAGGTTGCCTCTCATATGGAAACTCCATTCTaGAACACAGCGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FTDGSVKLQLQSYKVASHMETPF*NTALLF
Trigger: GAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCAT...ATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCATCAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCATGGTAAAAACTCGATaGTTAAGTCTGAATTGCACA +
Preference number: 4 (lower is better)
Translates to: AGYTNRKIVFSASYRRASMVKTR*LSLNCT
Trigger: TGTGCAATTCAGACTTAAGCATCGAGTTTTTACCAT...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGGCAATGGTGTTGTGCTaGAAACGTAAAATATATTTG +
Preference number: 4 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLAMVLC*KRKIYL
Trigger: CAAATATATTTTACGTTTGCAGCACAACACCATTGC...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCTGGAGTCATTTAATATaGTGCTTTGCTAGATTCGGA +
Preference number: 4 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRWSHLI*CFARFG
Trigger: TCCGAATCTAGCAAAGCAGCATATTAAATGACTCCA...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACTGTCATCTGAAATTCTaGAGGTGTGCCATGATTTTA +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHCHLKF*RCAMIL
Trigger: TAAAATCATGGCACACCTGCAGAATTTCAGATGACA...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACACCTCTTTGCTTTTCTaGTTTTATCAAGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNTSLLF*FYQGGC
Trigger: GCATCCTCCTTGATAAAAGCAGAAAAGCAAAGAGGT...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACAGAAGCCTCCGGGCAATaGTGTTGTGCTGCAAACGTA +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTEASGQ*CCAANV
Trigger: TACGTTTGCAGCACAACACCATTGCCCGGAGGCTTC...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp ATTTGTCTAGCCTCTTCAGCAGCTGTTGTATTTCTGATGGCTTGTAAGAGGAATCAGCTGTTGTATTTCTaGTGGCTTGTAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: ICLASSAAVVFLMACKRNQLLYF*WLVRGM
Trigger: CATTCCTCTTACAAGCCATCAGAAATACAACAGCTG...ATTCCTCTTACAAGCCATCAGAAATACAACAGCTGCTGAAGAGGCTAGACAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR TCA 90 bp TTTACTGATGGTTCTGTCAAACTACAACTCCAGAGTTATAAGGTTGCCTCTCATCGCAGTCCCACATTTTaGGAGCTGACTGAATCAAAA +
Preference number: 4 (lower is better)
Translates to: FTDGSVKLQLQSYKVASHRSPTF*ELTESK
Trigger: TTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCG...ATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCATCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAAGAGTTGCTTCCAAGTaGGGACGCAAATACTTTGGA +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLRVASK*GRKYFG
Trigger: TCCAAAGTATTTGCGTCCTCACTTGGAAGCAACTCT...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTACAAGCCAGACAGTACTaGGTTTTTACACAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLQARQY*VFTQAS
Trigger: AGAGGCTTGTGTAAAAACTCAGTACTGTCTGGCTTG...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TCTTTGACTGGCCTGGGATATTCTCATAGGTTTCATCATGAGAAACTGTTTCGTATTCCTGGCCAGTTCTaGCGCAATATCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: SLTGLGYSHRFHHEKLFRIPGQF*RNITNF
Trigger: AAAGTTTGTGATATTGCGGCAGAACTGGCCAGGAAT...ACGAAACAGTTTCTCATGATGAAACCTATGAGAATATCCCAGGCCAGTCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR GCA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACATGGTAAAAACTCGATaGTTAAGTCTGAATTGCACA +
Preference number: 4 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHMVKTR*LSLNCT
Trigger: TGTGCAATTCAGACTTAAGCATCGAGTTTTTACCAT...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAGTCATTTAATATGCTaGTTTGCTAGATTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNSHLIC*FARFGS
Trigger: GCTTCCGAATCTAGCAAAGCAGCATATTAAATGACT...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp ATTTGTCTAGCCTCTTCAGCAGCTGTTGTATTTCTGATGGCTTGTAAGAGGAATGGTTCAAATTACCACTaGTTAGAACCACCAGACACA +
Preference number: 4 (lower is better)
Translates to: ICLASSAAVVFLMACKRNGSNYH*LEPPDT
Trigger: TGTGTCTGGTGGTTCTAAGCAGTGGTAATTTGAACC...ATTCCTCTTACAAGCCATCAGAAATACAACAGCTGCTGAAGAGGCTAGACAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR CCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACATATTCTCCATGTCTTaGGTATCTAAAAGGGCTACT +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNIFSMS*VSKRAT
Trigger: AGTAGCCCTTTTAGATACCCAAGACATGGAGAATAT...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAACAGATTGGTATTGTTTaGGCCAAGAACAATTGGATG +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQQIGIV*AKNNWM
Trigger: CATCCAATTGTTCTTGGCCCAAACAATACCAATCTG...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACATATTTTGGGCAGATTaGTATTGTTTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNIFWAD*YCLGQE
Trigger: TTCTTGGCCCAAACAATACCAATCTGCCCAAAATAT...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACAGGCTCTCCAGAAGAATaGCCTACACACAACACTACC +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTGSPEE*PTHNTT
Trigger: GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCC...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATTCCAGTCAGGATTTTaGAGCATTTGCATAATGTGT +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQFQSGF*SICIMC
Trigger: ACACATTATGCAAATGCTTCAAAATCCTGACTGGAA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR TCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACATGCAGTATCGGCAACTaGTGCAATGGATGTCACAAC +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTCSIGN*CNGCHN
Trigger: GTTGTGACATCCATTGCATCAGTTGCCGATACTGCA...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TTTACTGATGGTTCTGTCAAACTACAACTCCAGAGTTATAAGGTTGCCTCTCATAGTCTCAGTTCTTTTTaGACCGCATTCTCAACGATG +
Preference number: 4 (lower is better)
Translates to: FTDGSVKLQLQSYKVASHSLSSF*TAFSTM
Trigger: CATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACT...ATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCATCAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACACATTCTGGCCCATGCTaGGATCATGTAAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTHSGPC*DHVRDL
Trigger: CAGATCTCTTACATGATCTCAGCATGGGCCAGAATG...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCAAGGGACCATCAGTTTaGCAACCTGTTCGGTGTACT +
Preference number: 4 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSKGPSV*QPVRCT
Trigger: AGTACACCGAACAGGTTGTCAAACTGATGGTCCCTT...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTATTCTGCGTATTTAAATaGGGCTGGACTACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLFCVFK*GWTTVF
Trigger: GAACACTGTAGTCCAGCCTCATTTAAATACGCAGAA...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAATAGACTTCATCAAATaGAGAGGACAAGAGACGTCT +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKIDFIK*RGQETS
Trigger: AGACGTCTCTTGTCCTCTGCATTTGATGAAGTCTAT...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAGCATTCTCAACGATGTaGTTCAGTGATGGCATAAAT +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKAFSTM*FSDGIN
Trigger: ATTTATGCCATCACTGAAGCACATCGTTGAGAATGC...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAACATCTGATGCATCCTaGATGAATTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKTSDAS*MNFSFP
Trigger: TGGGAAGGAAAAATTCATGCAGGATGCATCAGATGT...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR GCA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTTGTTTAATTGCCTCGTaGATTTCTCCTTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFCLIAS*ISPSAI
Trigger: AATTGCGGAAGGAGAAATGCACGAGGCAATTAAACA...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAATCGGCTTTGCAGATaGTACATAAGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQNRLCR*YIRKQK
Trigger: TTTCTGCTTTCTTATGTAGCATCTGCAAAGCCGATT...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTATTTTATCAAGGAGGATaGTGCCAGTCTGCATCTAAC +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLFYQGG*CQSASN
Trigger: GTTAGATGCAGACTGGCAGCATCCTCCTTGATAAAA...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTGTTCTATTTATGCAGTaGTACACAGGTTTCAAACTT +
Preference number: 4 (lower is better)
Translates to: QTELWSSKANHIQNLSGTVLFMQ*YTGFKL
Trigger: AAGTTTGAAACCTGTGTAGCACTGCATAAATAGAAC...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CCA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTCATCTATTAAATTCCTaGCCAGTTCTGCCGCAATAT +
Preference number: 4 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFHLLNS*PVLPQY
Trigger: ATATTGCGGCAGAACTGGCCAGGAATTTAATAGATG...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACACAAGGACTGCGCAGGTaGAGTCATTTAATATGCTGC +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTQGLRR*SHLICC
Trigger: GCAGCATATTAAATGACTCCACCTGCGCAGTCCTTG...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCTTTGACTGGCCTGGGATATTCTCATAGGTTTCATCATGAGAAACTGTTTCGTGATTGTGTTTCCATCTaGATAATCATGAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLTGLGYSHRFHHEKLFRDCVSI*IIMSSS
Trigger: TGAGCTACTCATGATTATTCAGATGGAAACACAATC...ACGAAACAGTTTCTCATGATGAAACCTATGAGAATATCCCAGGCCAGTCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR TCA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTGATTGTGTTTCCATCTaGATAATCATGAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFDCVSI*IIMSSS
Trigger: TGAGCTACTCATGATTATTCAGATGGAAACACAATC...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAATACCAAAGCTTTGCTaGTCTCCAAGGTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLIPKLC*SPRFTN
Trigger: ATTTGTGAACCTTGGAGATCAGCAAAGCTTTGGTAT...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAAACACACATCTACGCTaGGTAACTGTTCTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLNTHLR*VTVLKA
Trigger: AGCTTTAAGAACAGTTACTCAGCGTAGATGTGTGTT...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAGTTCCAAAACTAACTTaGTGCCTTTCTGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLVPKLT*CLSESA
Trigger: AGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAAC...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTACAGATTGGTATTGTTTaGGCCAAGAACAATTGGATG +
Preference number: 4 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLQIGIV*AKNNWM
Trigger: CATCCAATTGTTCTTGGCCCAAACAATACCAATCTG...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTATATTTTGGGCAGATTaGTATTGTTTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFIFWAD*YCLGQE
Trigger: TTCTTGGCCCAAACAATACCAATCTGCCCAAAATAT...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACAAGTCTCAGTTCTTTTTaGACCGCATTCTCAACGATG +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTSLSSF*TAFSTM
Trigger: CATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACT...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR TCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACACTACATTGCTCTAGCTaGTTGGCATCAGTACATGAA +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTLHCSS*LASVHE
Trigger: TTCATGTACTGATGCCAATCAGCTAGAGCAATGTAG...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TTTACTGATGGTTCTGTCAAACTACAACTCCAGAGTTATAAGGTTGCCTCTCATATCTTCATGTTTAATTaGCTCGTGCATTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FTDGSVKLQLQSYKVASHIFMFN*LVHFSF
Trigger: GAAGGAGAAATGCACGAGGCAATTAAACATGAAGAT...ATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCATCAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CCA 90 bp GTTTCGTTAACATTTTTAGACTGGATGATGTACAACTGGTTCAAATTACCACTGATCAGAGGGAAGTGCTaGATAGACTTCATCAAATGC +
Preference number: 4 (lower is better)
Translates to: VSLTFLDWMMYNWFKLPLIRGKC*IDFIKC
Trigger: GCATTTGATGAAGTCTATCCAGCACTTCCCTCTGAT...CAGTGGTAATTTGAACCAGTTGTACATCATCCAGTCTAAAAATGTTAACGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR CCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCTGGCCATGGTCTATGTaGACAAATGAGGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSWPWSM*TNEVDN
Trigger: ATTGTCAACCTCATTTGTCCACATAGACCATGGCCA...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCAACATCAGAGGGAAGTaGTGGATAGACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSNIRGK*WIDFIK
Trigger: TTTGATGAAGTCTATCCAGCACTTCCCTCTGATGTT...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp GTTTCGTTAACATTTTTAGACTGGATGATGTACAACTGGTTCAAATTACCACTGAACATCAGAGGGAAGTaGTGGATAGACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: VSLTFLDWMMYNWFKLPLNIRGK*WIDFIK
Trigger: TTTGATGAAGTCTATCCAGCACTTCCCTCTGATGTT...CAGTGGTAATTTGAACCAGTTGTACATCATCCAGTCTAAAAATGTTAACGAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR CCA 90 bp GTTTCGTTAACATTTTTAGACTGGATGATGTACAACTGGTTCAAATTACCACTGCATCTATTAAATTCCTaGCCAGTTCTGCCGCAATAT +
Preference number: 4 (lower is better)
Translates to: VSLTFLDWMMYNWFKLPLHLLNS*PVLPQY
Trigger: ATATTGCGGCAGAACTGGCCAGGAATTTAATAGATG...CAGTGGTAATTTGAACCAGTTGTACATCATCCAGTCTAAAAATGTTAACGAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR TCA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACATTCCAGTCAGGATTTTaGAGCATTTGCATAATGTGT +
Preference number: 4 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTFQSGF*SICIMC
Trigger: ACACATTATGCAAATGCTTCAAAATCCTGACTGGAA...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
3UTR CAA 72 bp ATGGTTCTGTCAAACTACAACTCCAGAGTTATAAGGTaGCCTCTCATTACAGAAGTGTCAATTAGATTTAAG +
Preference number: 4 (lower is better)
Translates to: MVLSNYNSRVIR*PLITEVSIRFK
Trigger: CTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR GCA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCGCAATGGTGTTGTGCTaGAAACGTAAAATATATTTG +
Preference number: 4 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSAMVLC*KRKIYL
Trigger: CAAATATATTTTACGTTTGCAGCACAACACCATTGC...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCAAACGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: YAALLDSEASGQWCCAANEQVEL*LLRRGR
Trigger: GCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTC...GTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCCGCGGCCGCCGCCATaGCGCTTCTACTCACGGACT +
Preference number: 5 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDPRPPP*RFYSRT
Trigger: AGTCCGTGAGTAGAAGCGCAATGGCGGCGGCCGCGG...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS GCA 90 bp GTTCAGGAGCTCCTGAATGGCGGCCTGCTGCTCAGGACTGAGCTGTaGTATGCACTCAGTCCACAGTCCTCCAGAAGTCTGTACTTGGCG +
Preference number: 5 (lower is better)
Translates to: VQELLNGGLLLRTEL*YALSPQSSRSLYLA
Trigger: CGCCAAGTACAGACTTCTGGAGGACTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGGCCGCCATTCAGGAGCTCCTGAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000491555.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LVEIHGNSILQHSAALPAEQVEL*LLRRGR
Trigger: GCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTC...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHEQVEL*LLRRGR
Trigger: GCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTC...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS CCA 90 bp AGTGCCGCAAGTATCCTGATCAGGGAAAACAGTTGTGCCTACACATaGGTCCTGGAAAGGCTTCTCCCCGGAACCACTGTGGTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SAASILIRENSCAYT*VLERLLPGTTVVRA
Trigger: AGCTCTGACCACAGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261574.10
ENST00000463157.6
ENST00000471898.5
ENST00000490369.6
ENST00000493281.6
ENST00000651721.2
CDS-3UTR CAA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACATGTTTCCGGACCACATaGTCGGGGCTGAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: TALLFLLVALQKNGLHTTCFRTT*SGLSRF
Trigger: AAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACA...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCGAGAACGGCGGCCATTaGTCTAGCCTCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLENGGH*SSLFSS
Trigger: GCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTC...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS GCA 90 bp TCCTCTGTTGAGTGCCGCAAGTATCCTGATCAGGGAAAACAGTTGTaGCTACACATGGGTCCTGGAAAGGCTTCTCCCCGGAACCACTGT +
Preference number: 5 (lower is better)
Translates to: SSVECRKYPDQGKQL*LHMGPGKASPRNHC
Trigger: ACAGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACTCAACAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000471898.5
ENST00000490369.6
ENST00000651721.2
CDS GCA 90 bp TCCTCTGTTGAGTGCCGCAAGTATCCTGATCAGGGAAAACAGTTGTaGCTACACATGGGTCCTGGAAAGGCTTCTCCCCGGAACCACCTA +
Preference number: 5 (lower is better)
Translates to: SSVECRKYPDQGKQL*LHMGPGKASPRNHL
Trigger: TAGGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACTCAACAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480611.6
ENST00000481455.6
ENST00000482642.1
ENST00000485433.6
CDS GCA 90 bp TCCTCTGTTGAGTGCCGCAAGTATCCTGATCAGGGAAAACAGTTGTaGCTACACATGGGTCCTGGAAAGGCTTCTCCCCGGAACCACTTG +
Preference number: 5 (lower is better)
Translates to: SSVECRKYPDQGKQL*LHMGPGKASPRNHL
Trigger: CAAGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACTCAACAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489058.6
CDS-3UTR CAA 90 bp AATAGCAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: NSRQNSGPLRPTIFKISLEQVEL*LLRRGR
Trigger: GCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTC...CAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CAA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTGAGAACGGCGGCCATTaGTCTAGCCTCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FLLVALQKNGLHTTLPISENGGH*SSLFSS
Trigger: GCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTC...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGGAGAACGGCGGCCATTaGTCTAGCCTCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLENGGH*SSLFSS
Trigger: GCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTC...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACACACGTTGATTGCCTaGGTCTTCCATGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TALLFLLVALQKNGLHTTHTLIA*VFHGLQ
Trigger: CTGCAGACCATGGAAGACCAAGGCAATCAACGTGTG...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTTGTTTCCGGACCACATaGTCGGGGCTGAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: KIVFSASYRRASRNSFSGCFRTT*SGLSRF
Trigger: AAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACA...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACAAAGGGCAAGCTGGCGTaGCATATTGTTGAGGCTAGT +
Preference number: 5 (lower is better)
Translates to: TALLFLLVALQKNGLHTTKGKLA*HIVEAS
Trigger: ACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTT...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCACTTGGCGAACGACATaGGCCAGACGTTTGGCACAA +
Preference number: 5 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLTWRTT*ARRLAQ
Trigger: TTGTGCCAAACGTCTGGCCAATGTCGTTCGCCAAGT...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS GCA 90 bp AGAATTCTTGAGTGCCGCAAGTATCCTGATCAGGGAAAACAGTTGTaGCTACACATGGGTCCTGGAAAGGCTTCTCCCCGGAACCACTGT +
Preference number: 5 (lower is better)
Translates to: RILECRKYPDQGKQL*LHMGPGKASPRNHC
Trigger: ACAGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACTCAAGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463157.6
ENST00000493281.6
CDS CCA 90 bp GCAGCTGCAGTCTCAGAGAGGGTGACGATCACTTCAAGGGCAAGCTaGCGTTGCATATTGTTGAGGCTAGTGTCTCCACACAACTTTAGA +
Preference number: 5 (lower is better)
Translates to: AAAVSERVTITSRAS*RCILLRLVSPHNFR
Trigger: TCTAAAGTTGTGTGGAGACACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGTGATCGTCACCCTCTCTGAGACTGCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTTGTTTCCGGACCACATaGTCGGGGCTGAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VEIHGNSILQHSAALPACCFRTT*SGLSRF
Trigger: AAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACA...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATGACTTAGCTGTAGAGTaGCTTCCAAGTGAGGACGCA +
Preference number: 5 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDDLAVE*LPSEDA
Trigger: TGCGTCCTCACTTGGAAGCAACTCTACAGCTAAGTC...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCAAACAAGGGCAAGCTGGCGTaGCATATTGTTGAGGCTAGT +
Preference number: 5 (lower is better)
Translates to: YAALLDSEASGQWCCAANKGKLA*HIVEAS
Trigger: ACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTT...GTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCCACACGTTGATTGCCTaGGTCTTCCATGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCHTLIA*VFHGLQ
Trigger: CTGCAGACCATGGAAGACCAAGGCAATCAACGTGTG...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCACACGTTGATTGCCTaGGTCTTCCATGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LVEIHGNSILQHSAALPAHTLIA*VFHGLQ
Trigger: CTGCAGACCATGGAAGACCAAGGCAATCAACGTGTG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCACACGTTGATTGCCTaGGTCTTCCATGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KIVFSASYRRASRNSFSGHTLIA*VFHGLQ
Trigger: CTGCAGACCATGGAAGACCAAGGCAATCAACGTGTG...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTATGGGCCTGCACACGTaGATTGCCTTGGTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FLLVALQKNGLHTTLPISMGLHT*IALVFH
Trigger: ATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCAT...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCGCCATATGCAGCTGCTaGCCTGACTTCTGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: AGYTNRKIVFSASYRRASAICSC*PDFWAV
Trigger: AACAGCCCAGAAGTCAGGCAAGCAGCTGCATATGGC...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATTTTGGGTCTACTGGTTaGCTGGGTAGGAGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDFGSTG*LGRRLL
Trigger: AAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAAA...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTGATCAGGGAAAACAGTaGTGCCTACACATGGGTCCT +
Preference number: 5 (lower is better)
Translates to: FLLVALQKNGLHTTLPISDQGKQ*CLHMGP
Trigger: AGGACCCATGTGTAGGCACAACTGTTTTCCCTGATC...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp AATAGCAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGCCGCGGCCGCCGCCATaGCGCTTATTGTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: NSRQNSGPLRPTIFKISLPRPPP*RLLCFL
Trigger: CAGAAAACACAATAAGCGCAATGGCGGCGGCCGCGG...CAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACGAGAACGGCGGCCATTaGTCTAGCCTCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNENGGH*SSLFSS
Trigger: GCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTC...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTTGGCGTTGCATATTGTaGAGGCTAGTGTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: KIVFSASYRRASRNSFSGWRCIL*RLVSPH
Trigger: GTGTGGAGACACTAGCCTCAACAATATGCAACGCCA...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTTGGCGTTGCATATTGTaGAGGCTAGTGTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSWRCIL*RLVSPH
Trigger: GTGTGGAGACACTAGCCTCAACAATATGCAACGCCA...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGAGCTGGCGTTGCATATaGTTGAGGCTAGTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWSWRCI*LRLVSP
Trigger: TGGAGACACTAGCCTCAACAATATGCAACGCCAGCT...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTAAGGGCAAGCTGGCGTaGCATATTGTTGAGGCTAGT +
Preference number: 5 (lower is better)
Translates to: LVEIHGNSILQHSAALPAKGKLA*HIVEAS
Trigger: ACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTT...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGACTGCATACCTTACTCTaGGATGAGGATCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRLHTLL*DEDPGE
Trigger: TTCTCCAGGATCCTCATCCAAGAGTAAGGTATGCAG...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGAAAAGGGACCATCAGTTaGACAACCTGTTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRKGTIS*TTCSVY
Trigger: GTACACCGAACAGGTTGTCAAACTGATGGTCCCTTT...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACGCCATATGCAGCTGCTaGCCTGACTTCTGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHAICSC*PDFWAV
Trigger: AACAGCCCAGAAGTCAGGCAAGCAGCTGCATATGGC...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTACTTGGCGAACGACATaGGCCAGACGTTTGGCACAA +
Preference number: 5 (lower is better)
Translates to: SFSGLVEIHGNSILQHSATWRTT*ARRLAQ
Trigger: TTGTGCCAAACGTCTGGCCAATGTCGTTCGCCAAGT...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGACTCCGGGCAATGGTGTaGTGCTGCAAACGTAAAATA +
Preference number: 5 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRLRAMV*CCKRKI
Trigger: TATTTTACGTTTGCAGCACAACACCATTGCCCGGAG...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS TCA 90 bp AATGTGAAGGGCAGCTTCCCGCAGTCCCACATTTTGAGAGCTGACTaGATCAAAAAGGAACTTCAAACCTTCGGGCCACTGGTTATTGCC +
Preference number: 5 (lower is better)
Translates to: NVKGSFPQSHILRAD*IKKELQTFGPLVIA
Trigger: GGCAATAACCAGTGGCCCGAAGGTTTGAAGTTCCTTTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCGGGAAGCTGCCCTTCACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000403772.8
ENST00000469360.5
ENST00000473582.1
ENST00000475420.5
ENST00000490680.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCAAACAATTTCTTTCCTCTGTaGAGTGCCGCAAGTATCCTG +
Preference number: 5 (lower is better)
Translates to: YAALLDSEASGQWCCAANNFFPL*SAASIL
Trigger: CAGGATACTTGCGGCACTCAACAGAGGAAAGAAATT...GTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTGATCCTCAGGCATTaGAAGACATGCTGCAGTACT +
Preference number: 5 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLLILRH*KTCCST
Trigger: AGTACTGCAGCATGTCTTCAAATGCCTGAGGATCAA...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATTGATCCTCAGGCATTaGAAGACATGCTGCAGTACT +
Preference number: 5 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRLILRH*KTCCST
Trigger: AGTACTGCAGCATGTCTTCAAATGCCTGAGGATCAA...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp GTTTCGTTAACATTTTTAGACTGGATGATGTACAACTGGTTCAAATTACCACTGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: VSLTFLDWMMYNWFKLPLEQVEL*LLRRGR
Trigger: GCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTC...CAGTGGTAATTTGAACCAGTTGTACATCATCCAGTCTAAAAATGTTAACGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR CAA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTTGTTTCCGGACCACATaGTCGGGGCTGAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: QTELWSSKANHIQNLSGTCFRTT*SGLSRF
Trigger: AAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACA...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CAA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTGACTTAGCTGTAGAGTaGCTTCCAAGTGAGGACGCA +
Preference number: 5 (lower is better)
Translates to: LVALQKNGLHTTLPISFADLAVE*LPSEDA
Trigger: TGCGTCCTCACTTGGAAGCAACTCTACAGCTAAGTC...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGTGGCGTTGCATATTGTaGAGGCTAGTGTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLWRCIL*RLVSPH
Trigger: GTGTGGAGACACTAGCCTCAACAATATGCAACGCCA...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAGCTGGCGTTGCATATaGTTGAGGCTAGTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLSWRCI*LRLVSP
Trigger: TGGAGACACTAGCCTCAACAATATGCAACGCCAGCT...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCGCCTGCAACTGCATaGCTGTCAAAATCATCATCT +
Preference number: 5 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRSPATA*LSKSSS
Trigger: AGATGATGATTTTGACAGCAATGCAGTTGCAGGCGA...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTTGCATAATGTGTTCCTaGATCATCGGCAGAACGAGC +
Preference number: 5 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSCIMCS*IIGRTS
Trigger: GCTCGTTCTGCCGATGATCAAGGAACACATTATGCA...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTCTGCATACCTTACTCTaGGATGAGGATCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: LVEIHGNSILQHSAALPALHTLL*DEDPGE
Trigger: TTCTCCAGGATCCTCATCCAAGAGTAAGGTATGCAG...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGCTGCATACCTTACTCTaGGATGAGGATCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLLHTLL*DEDPGE
Trigger: TTCTCCAGGATCCTCATCCAAGAGTAAGGTATGCAG...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGATGGGCCTGCACACGTaGATTGCCTTGGTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQMGLHT*IALVFH
Trigger: ATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCAT...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTAAAGGGACCATCAGTTaGACAACCTGTTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSKGTIS*TTCSVY
Trigger: GTACACCGAACAGGTTGTCAAACTGATGGTCCCTTT...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGCTGACTTCTGGGCTGTaGTCACATACATATTGGAGC +
Preference number: 5 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLLTSGL*SHTYWS
Trigger: GCTCCAATATGTATGTGACAACAGCCCAGAAGTCAG...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTTTTGGGTCTACTGGTTaGCTGGGTAGGAGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SFSGLVEIHGNSILQHSAFGSTG*LGRRLL
Trigger: AAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAAA...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS CCA 90 bp CTTAAATGGTTTCATCTGAATGTGAGGTTTTGGGATGACTTACTGTaGTCAGAGCTGTTCCCGGCTGCTCCAGTTGTGGGAGGTCATCAA +
Preference number: 5 (lower is better)
Translates to: LKWFHLNVRFWDDLL*SELFPAAPVVGGHQ
Trigger: TTGATGACCTCCCACAACTGGAGCAGCCGGGAACAGCTCTGACCACAGTAAGTCATCCCAAAACCTCACATTCAGATGAAACCATTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482642.1
CDS-3UTR CAA 90 bp TTAATATGCTGCTTTGCTAGATTCGGAAGCCTCCGGGCAATGGTGTTGTGCTGCCCGCCATTGCGCTTATaGTGTTTTCTGTTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: LICCFARFGSLRAMVLCCPPLRL*CFLLLL
Trigger: TAGAAGCAACAGAAAACACAATAAGCGCAATGGCGG...GCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTACCGCGGCCGCCGCCATaGCGCTTATTGTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLPRPPP*RLLCFL
Trigger: CAGAAAACACAATAAGCGCAATGGCGGCGGCCGCGG...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TTTACTGATGGTTCTGTCAAACTACAACTCCAGAGTTATAAGGTTGCCTCTCATCCGCGGCCGCCGCCATaGCGCTTATTGTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: FTDGSVKLQLQSYKVASHPRPPP*RLLCFL
Trigger: CAGAAAACACAATAAGCGCAATGGCGGCGGCCGCGG...ATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCATCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTTGACTGGCCTGGGATATTCTCATAGGTTTCATCATGAGAAACTGTTTCGTGAGAACGGCGGCCATTaGTCTAGCCTCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLTGLGYSHRFHHEKLFRENGGH*SSLFSS
Trigger: GCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTC...ACGAAACAGTTTCTCATGATGAAACCTATGAGAATATCCCAGGCCAGTCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR CAA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGCTGGCGTTGCATATaGTTGAGGCTAGTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRSWRCI*LRLVSP
Trigger: TGGAGACACTAGCCTCAACAATATGCAACGCCAGCT...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp CTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTCGCCTGCAACTGCATaGCTGTCAAAATCATCATCT +
Preference number: 5 (lower is better)
Translates to: LVEIHGNSILQHSAALPASPATA*LSKSSS
Trigger: AGATGATGATTTTGACAGCAATGCAGTTGCAGGCGA...AGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGTCGCCTGCAACTGCATaGCTGTCAAAATCATCATCT +
Preference number: 5 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWSPATA*LSKSSS
Trigger: AGATGATGATTTTGACAGCAATGCAGTTGCAGGCGA...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTTCGCCTGCAACTGCATaGCTGTCAAAATCATCATCT +
Preference number: 5 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSSPATA*LSKSSS
Trigger: AGATGATGATTTTGACAGCAATGCAGTTGCAGGCGA...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTTGCATAATGTGTTCCTaGATCATCGGCAGAACGAGC +
Preference number: 5 (lower is better)
Translates to: LVALQKNGLHTTLPISFACIMCS*IIGRTS
Trigger: GCTCGTTCTGCCGATGATCAAGGAACACATTATGCA...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACGGAATAAGTAGTGACTaGGGACAGTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNGISSD*GQSSVK
Trigger: CTTTACTGAAGACTGTCCCAAGTCACTACTTATTCC...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACAAAGTCTCAGTTCTTTTaGAACCGCATTCTCAACGAT +
Preference number: 5 (lower is better)
Translates to: TALLFLLVALQKNGLHTTKSQFF*NRILND
Trigger: ATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACTT...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTAAAGGGACCATCAGTTaGACAACCTGTTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LVALQKNGLHTTLPISFAKGTIS*TTCSVY
Trigger: GTACACCGAACAGGTTGTCAAACTGATGGTCCCTTT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATTGTGGACAAATGAGGTaGACAATTAATGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDCGQMR*TINGSS
Trigger: GCTGCTTCCATTAATTGTCAACCTCATTTGTCCACA...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCTGACTTCTGGGCTGTaGTCACATACATATTGGAGC +
Preference number: 5 (lower is better)
Translates to: LVALQKNGLHTTLPISFALTSGL*SHTYWS
Trigger: GCTCCAATATGTATGTGACAACAGCCCAGAAGTCAG...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAGCCATATGCAGCTGCTaGCCTGACTTCTGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQAICSC*PDFWAV
Trigger: AACAGCCCAGAAGTCAGGCAAGCAGCTGCATATGGC...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATTTGGGCAGATTGGTATaGTTTGGGCCAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDLGRLV*FGPRTI
Trigger: AATTGTTCTTGGCCCAAACAATACCAATCTGCCCAA...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGGAAGGTAGGAGGTTCTaGCTCCCAAAGTGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQEGRRF*LPKCLA
Trigger: TGCTAAGCACTTTGGGAGCAAGAACCTCCTACCTTC...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTTGACTGGCCTGGGATATTCTCATAGGTTTCATCATGAGAAACTGTTTCGTTGTTTCCGGACCACATaGTCGGGGCTGAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: SLTGLGYSHRFHHEKLFRCFRTT*SGLSRF
Trigger: AAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACA...ACGAAACAGTTTCTCATGATGAAACCTATGAGAATATCCCAGGCCAGTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACGACTTAGCTGTAGAGTaGCTTCCAAGTGAGGACGCA +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNDLAVE*LPSEDA
Trigger: TGCGTCCTCACTTGGAAGCAACTCTACAGCTAAGTC...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCCTGCATACCTTACTCTaGGATGAGGATCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRLHTLL*DEDPGE
Trigger: TTCTCCAGGATCCTCATCCAAGAGTAAGGTATGCAG...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAATGGGCCTGCACACGTaGATTGCCTTGGTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQMGLHT*IALVFH
Trigger: ATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCAT...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTGGAATAAGTAGTGACTaGGGACAGTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSGISSD*GQSSVK
Trigger: CTTTACTGAAGACTGTCCCAAGTCACTACTTATTCC...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAAAGGGACCATCAGTTaGACAACCTGTTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHKGTIS*TTCSVY
Trigger: GTACACCGAACAGGTTGTCAAACTGATGGTCCCTTT...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCAATGTTCTTCAAGCTTaGCTTTCAATATACCTCCCA +
Preference number: 5 (lower is better)
Translates to: AALPACGSPEEWPTHNTTNVLQA*LSIYLP
Trigger: TGGGAGGTATATTGAAAGCAAAGCTTGAAGAACATT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTGTGGACAAATGAGGTaGACAATTAATGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SGRNPWKLHSATQRCSSCCGQMR*TINGSS
Trigger: GCTGCTTCCATTAATTGTCAACCTCATTTGTCCACA...GCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTGTGGACAAATGAGGTaGACAATTAATGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: FLLVALQKNGLHTTLPISCGQMR*TINGSS
Trigger: GCTGCTTCCATTAATTGTCAACCTCATTTGTCCACA...AGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAGCCATATGCAGCTGCTaGCCTGACTTCTGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKAICSC*PDFWAV
Trigger: AACAGCCCAGAAGTCAGGCAAGCAGCTGCATATGGC...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGGCATTGACATTTTCTTaGGTCTTAGAATCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: GRNPWKLHSATQRCSSCLALTFS*VLESAD
Trigger: GTCTGCGGATTCTAAGACCAAAGAAAATGTCAATGC...CAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp ACAGCGCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACATTGGGCCAAGAACAATaGGATGATTACTTTCAATCA +
Preference number: 5 (lower is better)
Translates to: TALLFLLVALQKNGLHTTLGQEQ*DDYFQS
Trigger: TGATTGAAAGTAATCATCCAATTGTTCTTGGCCCAA...TGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTTTGGGCAGATTGGTATaGTTTGGGCCAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: SSCLWLSRRMAYTQHYRSLGRLV*FGPRTI
Trigger: AATTGTTCTTGGCCCAAACAATACCAATCTGCCCAA...AGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGAAATATTTTGGGCAGATaGGTATTGTTTGGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: CSSCLWLSRRMAYTQHYRNILGR*VLFGPR
Trigger: TCTTGGCCCAAACAATACCAATCTGCCCAAAATATT...TCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTGCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCACCTTCCCTATTAACTaGATTCAACTCCAATTACCT +
Preference number: 5 (lower is better)
Translates to: AALPACGSPEEWPTHNTTTFPIN*IQLQLP
Trigger: AGGTAATTGGAGTTGAATCAAGTTAATAGGGAAGGT...GGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTTCCTTCCCATCTTTTaGCTACTTACAGCAAGTATC +
Preference number: 5 (lower is better)
Translates to: YRRASRNSFSGLVEIHGNFLPIF*LLTASI
Trigger: GATACTTGCTGTAAGTAGCAAAAAGATGGGAAGGAA...GTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS-3UTR CAA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCCACGCCTGGGGCTTATaGTGTTTTCTGTTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRHAWGL*CFLLLL
Trigger: TAGAAGCAACAGAAAACACAATAAGCCCCAGGCGTG...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS-3UTR CAA 90 bp AATAGCAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGATCAGGGAAAACAGTaGTGCCTACACATGGGTCCT +
Preference number: 5 (lower is better)
Translates to: NSRQNSGPLRPTIFKISLDQGKQ*CLHMGP
Trigger: AGGACCCATGTGTAGGCACAACTGTTTTCCCTGATC...CAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATGGCGTTGCATATTGTaGAGGCTAGTGTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQWRCIL*RLVSPH
Trigger: GTGTGGAGACACTAGCCTCAACAATATGCAACGCCA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACTGCATAATGTGTTCCTaGATCATCGGCAGAACGAGC +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNCIMCS*IIGRTS
Trigger: GCTCGTTCTGCCGATGATCAAGGAACACATTATGCA...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTCCAGTCAGGATTTaGAAGCATTTGCATAATGTG +
Preference number: 5 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLFPVRI*KHLHNV
Trigger: CACATTATGCAAATGCTTCAAAATCCTGACTGGAAA...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATTTTCCAGTCAGGATTTaGAAGCATTTGCATAATGTG +
Preference number: 5 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDFPVRI*KHLHNV
Trigger: CACATTATGCAAATGCTTCAAAATCCTGACTGGAAA...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTATGGGCCTGCACACGTaGATTGCCTTGGTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFMGLHT*IALVFH
Trigger: ATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCAT...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTAAGTCTCAGTTCTTTTaGAACCGCATTCTCAACGAT +
Preference number: 5 (lower is better)
Translates to: KIVFSASYRRASRNSFSGKSQFF*NRILND
Trigger: ATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACTT...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp AGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGGAAGTCTCAGTTCTTTTaGAACCGCATTCTCAACGAT +
Preference number: 5 (lower is better)
Translates to: RNPWKLHSATQRCSSCLWKSQFF*NRILND
Trigger: ATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACTT...CCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACCTGACTTCTGGGCTGTaGTCACATACATATTGGAGC +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNLTSGL*SHTYWS
Trigger: GCTCCAATATGTATGTGACAACAGCCCAGAAGTCAG...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCGCATTGACATTTTCTTaGGTCTTAGAATCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLALTFS*VLESAD
Trigger: GTCTGCGGATTCTAAGACCAAAGAAAATGTCAATGC...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTGCATTGACATTTTCTTaGGTCTTAGAATCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: VEIHGNSILQHSAALPACALTFS*VLESAD
Trigger: GTCTGCGGATTCTAAGACCAAAGAAAATGTCAATGC...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCAGGAACTCCTTCAGTGGTTTTACACAGTCAGGCTaGAACTTCATGATTTTCCCT +
Preference number: 5 (lower is better)
Translates to: KIVFSASYRRASRNSFSGFTQSG*NFMIFP
Trigger: AGGGAAAATCATGAAGTTCAAGCCTGACTGTGTAAA...ACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp GCTCTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATTTGGGCCAAGAACAATaGGATGATTACTTTCAATCA +
Preference number: 5 (lower is better)
Translates to: ALPACGSPEEWPTHNTTDLGQEQ*DDYFQS
Trigger: TGATTGAAAGTAATCATCCAATTGTTCTTGGCCCAA...ATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGTTGGGCAGATTGGTATaGTTTGGGCCAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLLGRLV*FGPRTI
Trigger: AATTGTTCTTGGCCCAAACAATACCAATCTGCCCAA...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAACTTGGCGAACGACATaGGCCAGACGTTTGGCACAA +
Preference number: 5 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKTWRTT*ARRLAQ
Trigger: TTGTGCCAAACGTCTGGCCAATGTCGTTCGCCAAGT...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTCCTGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCAGATTCAGATATGATTaGGTCTGTAGACTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPACGSPEEWPTHNTTDLRFRYD*VCRLSF
Trigger: GAAGGAAAGTCTACAGACCAAATCATATCTGAATCT...GAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357602.7
CDS GCA 90 bp AGGCTGTTGGAGCCCCGTTGTTTGGTCAAACAGCAGTCTAGATGTTaGTGGGAAAGTATAGCAAGTATCTTACAATTTGGACACATGACA +
Preference number: 5 (lower is better)
Translates to: RLLEPRCLVKQQSRC*WESIASILQFGHMT
Trigger: TGTCATGTGTCCAAATTGTAAGATACTTGCTATACTTTCCCAGCAACATCTAGACTGCTGTTTGACCAAACAACGGGGCTCCAACAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496368.6
CDS CCA 90 bp AGTGCAGATGAAATTCTTAAATGGTTTCATCTGAATGTGAGGTTTTaGGATGACTTACTGTGGTCAGAGCTGTTCCCGGCTGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SADEILKWFHLNVRF*DDLLWSELFPAAPV
Trigger: AACTGGAGCAGCCGGGAACAGCTCTGACCACAGTAAGTCATCCCAAAACCTCACATTCAGATGAAACCATTTAAGAATTTCATCTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482642.1
CDS-3UTR CAA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTGATCAGGGAAAACAGTaGTGCCTACACATGGGTCCT +
Preference number: 5 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFDQGKQ*CLHMGP
Trigger: AGGACCCATGTGTAGGCACAACTGTTTTCCCTGATC...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTAATTTCTTTCCTCTGTaGAGTGCCGCAAGTATCCTG +
Preference number: 5 (lower is better)
Translates to: QTELWSSKANHIQNLSGTNFFPL*SAASIL
Trigger: CAGGATACTTGCGGCACTCAACAGAGGAAAGAAATT...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACTTGATCCTCAGGCATTaGAAGACATGCTGCAGTACT +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNLILRH*KTCCST
Trigger: AGTACTGCAGCATGTCTTCAAATGCCTGAGGATCAA...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp CAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGGTACTCCGCCATTGCGCTTATaGTGTTTTCTGTTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: QTELWSSKANHIQNLSGTPPLRL*CFLLLL
Trigger: TAGAAGCAACAGAAAACACAATAAGCGCAATGGCGG...AGTACCAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATGCATAATGTGTTCCTaGATCATCGGCAGAACGAGC +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQCIMCS*IIGRTS
Trigger: GCTCGTTCTGCCGATGATCAAGGAACACATTATGCA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGTTTAATACCAAAGCTTaGCTGATCTCCAAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLFNTKA*LISKVH
Trigger: GTGAACCTTGGAGATCAGCAAAGCTTTGGTATTAAA...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTTTTACACAGTCAGGCTaGAACTTCATGATTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RASRNSFSGLVEIHGNSIFTQSG*NFMIFP
Trigger: AGGGAAAATCATGAAGTTCAAGCCTGACTGTGTAAA...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGTTTACACAGTCAGGCTaGAACTTCATGATTTTCCCT +
Preference number: 5 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLFTQSG*NFMIFP
Trigger: AGGGAAAATCATGAAGTTCAAGCCTGACTGTGTAAA...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGGCAGATTGGTATTGTTaGGGCCAAGAACAATTGGAT +
Preference number: 5 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQADWYC*GQEQLD
Trigger: ATCCAATTGTTCTTGGCCCAAACAATACCAATCTGC...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTAATATTTTGGGCAGATaGGTATTGTTTGGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: SFSGLVEIHGNSILQHSANILGR*VLFGPR
Trigger: TCTTGGCCCAAACAATACCAATCTGCCCAAAATATT...AGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTTTTGGGTCTACTGGTTaGCTGGGTAGGAGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFFGSTG*LGRRLL
Trigger: AAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAAA...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp AAACATCTTCTGACCACACTGTCATCTGAAATTCTGCAGGTGTGCCATGATTTTGAAGGTAGGAGGTTCTaGCTCCCAAAGTGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: KHLLTTLSSEILQVCHDFEGRRF*LPKCLA
Trigger: TGCTAAGCACTTTGGGAGCAAGAACCTCCTACCTTC...AAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp GTAGAAATCCATGGAAACTCCATTCTGCAACACAGCGCTGCTCTTCCTGCTTGTAACAATATATATCACTaGCTGACATGCAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: VEIHGNSILQHSAALPACNNIYH*LTCKTP
Trigger: AGGGGTCTTGCATGTCAGCAAGTGATATATATTGTT...ACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp AGGGCTTCCAGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTAACAATATATATCACTaGCTGACATGCAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: RASRNSFSGLVEIHGNSINNIYH*LTCKTP
Trigger: AGGGGTCTTGCATGTCAGCAAGTGATATATATTGTT...AATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp AATAGCAGACAGAACTCTGGTCCTCTAAGGCCAACCATATTCAAAATCTCTCTGTTGATCCTCAGGCATTaGAAGACATGCTGCAGTACT +
Preference number: 5 (lower is better)
Translates to: NSRQNSGPLRPTIFKISLLILRH*KTCCST
Trigger: AGTACTGCAGCATGTCTTCAAATGCCTGAGGATCAA...CAGAGAGATTTTGAATATGGTTGGCCTTAGAGGACCAGAGTTCTGTCTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490369.6
CDS-3UTR CAA 90 bp GCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAGGGCTTCCTTTCCAGTCAGGATTTaGAAGCATTTGCATAATGTG +
Preference number: 5 (lower is better)
Translates to: AGYTNRKIVFSASYRRASFPVRI*KHLHNV
Trigger: CACATTATGCAAATGCTTCAAAATCCTGACTGGAAA...GGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGTTTCTGAATCAGCTCTaGAAGCTTCAGTACCATAAT +
Preference number: 5 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLFLNQL*KLQYHN
Trigger: ATTATGGTACTGAAGCTTCAAGAGCTGATTCAGAAA...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAAGTCTCAGTTCTTTTaGAACCGCATTCTCAACGAT +
Preference number: 5 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRKSQFF*NRILND
Trigger: ATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACTT...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGTTTAATACCAAAGCTTaGCTGATCTCCAAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQFNTKA*LISKVH
Trigger: GTGAACCTTGGAGATCAGCAAAGCTTTGGTATTAAA...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AGGAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACTTTAATACCAAAGCTTaGCTGATCTCCAAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: RNSFSGLVEIHGNSILQHFNTKA*LISKVH
Trigger: GTGAACCTTGGAGATCAGCAAAGCTTTGGTATTAAA...GTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TGCTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGAATGTTCTTCAAGCTTaGCTTTCAATATACCTCCCA +
Preference number: 5 (lower is better)
Translates to: CLWLSRRMAYTQHYRSLLNVLQA*LSIYLP
Trigger: TGGGAGGTATATTGAAAGCAAAGCTTGAAGAACATT...CAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAACTGACTTCTGGGCTGTaGTCACATACATATTGGAGC +
Preference number: 5 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKLTSGL*SHTYWS
Trigger: GCTCCAATATGTATGTGACAACAGCCCAGAAGTCAG...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACGCATTGACATTTTCTTaGGTCTTAGAATCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNALTFS*VLESAD
Trigger: GTCTGCGGATTCTAAGACCAAAGAAAATGTCAATGC...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCTTGGGCCAAGAACAATaGGATGATTACTTTCAATCA +
Preference number: 5 (lower is better)
Translates to: LWLSRRMAYTQHYRSLLLLGQEQ*DDYFQS
Trigger: TGATTGAAAGTAATCATCCAATTGTTCTTGGCCCAA...GAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACGCAGATTGGTATTGTTaGGGCCAAGAACAATTGGAT +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNADWYC*GQEQLD
Trigger: ATCCAATTGTTCTTGGCCCAAACAATACCAATCTGC...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTCAGGTGGGCGGGTTATACCAATAGAAAAATAGTCTTCAGTGCTAGCTACCGCAATATTTTGGGCAGATaGGTATTGTTTGGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: FRWAGYTNRKIVFSASYRNILGR*VLFGPR
Trigger: TCTTGGCCCAAACAATACCAATCTGCCCAAAATATT...GCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000651721.2
CDS-3UTR CAA 90 bp CTTGTGGCTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTACTTGTGCGTGTAACTaGTTACAAAATTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LVALQKNGLHTTLPISFATCACN*LQNSQK
Trigger: TTTCTGGGAATTTTGTAACAAGTTACACGCACAAGT...AGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp GAACTCCTTCAGTGGTCTGGTAGAAATCCATGGAAACTCCATTCTGCAACACAGTTTCCAGTCAGGATTTaGAAGCATTTGCATAATGTG +
Preference number: 5 (lower is better)
Translates to: ELLQWSGRNPWKLHSATQFPVRI*KHLHNV
Trigger: CACATTATGCAAATGCTTCAAAATCCTGACTGGAAA...CTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAGGAATAAGTAGTGACTaGGGACAGTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQGISSD*GQSSVK
Trigger: CTTTACTGAAGACTGTCCCAAGTCACTACTTATTCC...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATGTGGACAAATGAGGTaGACAATTAATGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQCGQMR*TINGSS
Trigger: GCTGCTTCCATTAATTGTCAACCTCATTTGTCCACA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAGCAGATTGGTATTGTTaGGGCCAAGAACAATTGGAT +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQADWYC*GQEQLD
Trigger: ATCCAATTGTTCTTGGCCCAAACAATACCAATCTGC...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TTGAGTTATGCCAAAGTTTCTAACACTTGTGCGTGTAACTTGTTACAAAATTCCGACTTAGCTGTAGAGTaGCTTCCAAGTGAGGACGCA +
Preference number: 5 (lower is better)
Translates to: LSYAKVSNTCACNLLQNSDLAVE*LPSEDA
Trigger: TGCGTCCTCACTTGGAAGCAACTCTACAGCTAAGTC...GGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATTTACACAGTCAGGCTaGAACTTCATGATTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQFTQSG*NFMIFP
Trigger: AGGGAAAATCATGAAGTTCAAGCCTGACTGTGTAAA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAATTGGGCAGATTGGTATaGTTTGGGCCAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKLGRLV*FGPRTI
Trigger: AATTGTTCTTGGCCCAAACAATACCAATCTGCCCAA...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACACTTGTGCGTGTAACTaGTTACAAAATTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LSRRMAYTQHYRSLLLKNTCACN*LQNSQK
Trigger: TTTCTGGGAATTTTGTAACAAGTTACACGCACAAGT...GTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp CTCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAATTTCTGAATCAGCTCTaGAAGCTTCAGTACCATAAT +
Preference number: 5 (lower is better)
Translates to: LQKNGLHTTLPISFAQKQFLNQL*KLQYHN
Trigger: ATTATGGTACTGAAGCTTCAAGAGCTGATTCAGAAA...TTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS CCA 90 bp CAGTATCACGCTAAATTGTTCCTCAGTGCAGATGAAATTCTTAAATaGTTTCATCTGAATGTGAGGTTTTGGGATGACTTACTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QYHAKLFLSADEILK*FHLNVRFWDDLLWS
Trigger: TGACCACAGTAAGTCATCCCAAAACCTCACATTCAGATGAAACCATTTAAGAATTTCATCTGCACTGAGGAACAATTTAGCGTGATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482642.1
ENST00000489058.6
CDS-3UTR CAA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACACCGCCATTGCGCTTATaGTGTTTTCTGTTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTPPLRL*CFLLLL
Trigger: TAGAAGCAACAGAAAACACAATAAGCGCAATGGCGG...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAATTTCTGAATCAGCTCTaGAAGCTTCAGTACCATAAT +
Preference number: 5 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKFLNQL*KLQYHN
Trigger: ATTATGGTACTGAAGCTTCAAGAGCTGATTCAGAAA...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAAAATGTTCTTCAAGCTTaGCTTTCAATATACCTCCCA +
Preference number: 5 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKNVLQA*LSIYLP
Trigger: TGGGAGGTATATTGAAAGCAAAGCTTGAAGAACATT...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAAGAATGGCCTACACACAACACTACCGATCTCTTTTGCTCAAAAACAAATTGGGCCAAGAACAATaGGATGATTACTTTCAATCA +
Preference number: 5 (lower is better)
Translates to: SRRMAYTQHYRSLLLKNKLGQEQ*DDYFQS
Trigger: TGATTGAAAGTAATCATCCAATTGTTCTTGGCCCAA...TTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000651721.2
CDS-3UTR CAA 90 bp AGCTTAAAGTGGAAGATGGTAAAAACTCGATGCTTAAGTCTGAATTGCACAAGGAATATTTTGGGCAGATaGGTATTGTTTGGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: SLKWKMVKTRCLSLNCTRNILGR*VLFGPR
Trigger: TCTTGGCCCAAACAATACCAATCTGCCCAAAATATT...CCTTGTGCAATTCAGACTTAAGCATCGAGTTTTTACCATCTTCCACTTTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTATTTCTGAATCAGCTCTaGAAGCTTCAGTACCATAAT +
Preference number: 5 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLFLNQL*KLQYHN
Trigger: ATTATGGTACTGAAGCTTCAAGAGCTGATTCAGAAA...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAAATGTTCTTCAAGCTTaGCTTTCAATATACCTCCCA +
Preference number: 5 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLNVLQA*LSIYLP
Trigger: TGGGAGGTATATTGAAAGCAAAGCTTGAAGAACATT...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TGGGTTTCAGAATCATGTCACACTAACAGCATTTACTACCAACCTTCCCTATTAACCTTCCCTATTAACTaGATTCAACTCCAATTACCT +
Preference number: 5 (lower is better)
Translates to: WVSESCHTNSIYYQPSLLTFPIN*IQLQLP
Trigger: AGGTAATTGGAGTTGAATCAAGTTAATAGGGAAGGT...TAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS-3UTR CAA 90 bp TCCAGAGTTATAAGGTTGCCTCTCATTACAGAAGTGTCAATTAGATTTAAGACATTTAATACCAAAGCTTaGCTGATCTCCAAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: SRVIRLPLITEVSIRFKTFNTKA*LISKVH
Trigger: GTGAACCTTGGAGATCAGCAAAGCTTTGGTATTAAA...TGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261574.10
ENST00000651721.2
CDS GCA 72 bp GTAGAACTGTTGCTGCTCCGCCGCGGCCGCCGCCATTaGGCCCGCCGCGGCCGCCGGCGCCGGCGCCTCACT +
Preference number: 6 (lower is better)
Translates to: VELLLLRRGRRH*ARRGRRRRRLT
Trigger: AGTGAGGCGCCGGCGCCGGCGGCCGCGGCGGGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS CAA 90 bp CACATTGTCGGGGCTGAGCAGGTTTCCCAGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGCCGCCATTGCGCCCGCCGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: HIVGAEQVSQEQVEL*LLRRGRRHCARRGR
Trigger: GCGGCCGCGGCGGGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS CAA 72 bp GGGGCTGAGCAGGTTTCCCAGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGCCGCCATTGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: GAEQVSQEQVEL*LLRRGRRHCAR
Trigger: GCGGGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480641.2
CDS CCA 72 bp CCCTTCCTCCCGTCGCGCTCTCCAGTGACTCACGCCTaGGGCTTGCCCGGAAGAGGGGTTACTCAGCCCGGG +
Preference number: 6 (lower is better)
Translates to: PFLPSRSPVTHA*GLPGRGVTQPG
Trigger: CCCGGGCTGAGTAACCCCTCTTCCGGGCAAGCCCCAGGCGTGAGTCACTGGAGAGCGCGACGGGAGGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475420.5
CDS CAA 72 bp GGGGCTGAGCAGGTTTCCCAGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGCCGCCATTGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: GAEQVSQEQVEL*LLRRGRRHCAS
Trigger: AGAAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357602.7
ENST00000471898.5
ENST00000475420.5
CDS CAA 72 bp GGGGCTGAGCAGGTTTCCCAGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGCCGCCATTGCGCTTAT +
Preference number: 6 (lower is better)
Translates to: GAEQVSQEQVEL*LLRRGRRHCAY
Trigger: ATAAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261574.10
ENST00000421861.7
ENST00000460070.6
ENST00000463157.6
ENST00000480611.6
ENST00000481455.6
ENST00000481689.6
ENST00000485433.6
ENST00000489058.6
ENST00000490369.6
ENST00000493281.6
ENST00000496368.6
ENST00000631030.1
ENST00000651721.2
CDS CAA 90 bp CACATTGTCGGGGCTGAGCAGGTTTCCCAGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGCCGCCATTGCGCTAGGCGTGAGAGA +
Preference number: 6 (lower is better)
Translates to: HIVGAEQVSQEQVEL*LLRRGRRHCARRER
Trigger: TCTCTCACGCCTAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490680.5
ENST00000497270.5
CDS CAA 90 bp CACATTGTCGGGGCTGAGCAGGTTTCCCAGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGCCGCCATTGCGCTTCTACTCACGGA +
Preference number: 6 (lower is better)
Translates to: HIVGAEQVSQEQVEL*LLRRGRRHCASTHG
Trigger: TCCGTGAGTAGAAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357602.7
ENST00000471898.5
ENST00000475420.5
CDS CAA 90 bp CACATTGTCGGGGCTGAGCAGGTTTCCCAGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGCCGCCATTGCGCTTATTGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: HIVGAEQVSQEQVEL*LLRRGRRHCAYCVF
Trigger: GAAAACACAATAAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000261574.10
ENST00000421861.7
ENST00000460070.6
ENST00000463157.6
ENST00000480611.6
ENST00000481455.6
ENST00000481689.6
ENST00000485433.6
ENST00000489058.6
ENST00000490369.6
ENST00000493281.6
ENST00000496368.6
ENST00000631030.1
ENST00000651721.2
CDS TCA 72 bp TCAGGAGCTCCTGAATGGCGGCCTGCTGCTCAGGACTaGGCTGTGCTATGCACTCAGTCCACAGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SGAPEWRPAAQD*AVLCTQSTVLQ
Trigger: CTGGAGGACTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGGCCGCCATTCAGGAGCTCCTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000491555.5
ENST00000651721.2
CDS GCA 72 bp CTCCTGAATGGCGGCCTGCTGCTCAGGACTGAGCTGTaGTATGCACTCAGTCCACAGTCCTCCAGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: LLNGGLLLRTEL*YALSPQSSRSL
Trigger: CAGACTTCTGGAGGACTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGGCCGCCATTCAGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000491555.5
ENST00000651721.2
CDS CAA 72 bp GTTAATGAGGGCAGCAGCTGCATGGGCCTGCACACGTaGATTGCCTTGGTCTTCCATGGTCTGCAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: VNEGSSCMGLHT*IALVFHGLQQS
Trigger: GCTCTGCTGCAGACCATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCATGCAGCTGCTGCCCTCATTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000479736.1
ENST00000490680.5
ENST00000491555.5
ENST00000651721.2
CDS CAA 90 bp CTTTCCTCTGTTGAGTGCCGCAAGTATCCTGATCAGGGAAAACAGTaGTGCCTACACATGGGTCCTGGAAAGGCTTCTCCCCGGAACCAC +
Preference number: 6 (lower is better)
Translates to: LSSVECRKYPDQGKQ*CLHMGPGKASPRNH
Trigger: GTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACTCAACAGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261574.10
ENST00000471898.5
ENST00000480611.6
ENST00000481455.6
ENST00000482642.1
ENST00000485433.6
ENST00000489058.6
ENST00000490369.6
ENST00000651721.2
CDS CAA 90 bp CGGAGAATTCTTGAGTGCCGCAAGTATCCTGATCAGGGAAAACAGTaGTGCCTACACATGGGTCCTGGAAAGGCTTCTCCCCGGAACCAC +
Preference number: 6 (lower is better)
Translates to: RRILECRKYPDQGKQ*CLHMGPGKASPRNH
Trigger: GTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACTCAAGAATTCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463157.6
ENST00000493281.6
CDS GCA 72 bp ATTTCTTTCCTCTGTGTGGTCAGAGCTGTTCCCGGCTaGTCCAGTTGTGGGAGGTCATCAATCCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: ISFLCVVRAVPG*SSCGRSSIPQF
Trigger: GAACTGTGGGATTGATGACCTCCCACAACTGGAGCAGCCGGGAACAGCTCTGACCACACAGAGGAAAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460070.6
CDS CCA 72 bp AGTATCCTGATCAGGGAAAACAGTTGTGCCTACACATaGGTCCTGGAAAGGCTTCTCCCCGGAACCACTGTG +
Preference number: 6 (lower is better)
Translates to: SILIRENSCAYT*VLERLLPGTTV
Trigger: CACAGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261574.10
ENST00000463157.6
ENST00000471898.5
ENST00000490369.6
ENST00000493281.6
ENST00000651721.2
CDS CCA 72 bp GTCTCAGAGAGGGTGACGATCACTTCAAGGGCAAGCTaGCGTTGCATATTGTTGAGGCTAGTGTCTCCACAC +
Preference number: 6 (lower is better)
Translates to: VSERVTITSRAS*RCILLRLVSPH
Trigger: GTGTGGAGACACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGTGATCGTCACCCTCTCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000651721.2
CDS CCA 72 bp AGTATCCTGATCAGGGAAAACAGTTGTGCCTACACATaGGTCCTGGAAAGGCTTCTCCCCGGAACCACTTGG +
Preference number: 6 (lower is better)
Translates to: SILIRENSCAYT*VLERLLPGTTW
Trigger: CCAAGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489058.6
CDS TCA 72 bp GGCAGCTTCCCGCAGTCCCACATTTTGAGAGCTGACTaGATCAAAAAGGAACTTCAAACCTTCGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: GSFPQSHILRAD*IKKELQTFGPL
Trigger: CAGTGGCCCGAAGGTTTGAAGTTCCTTTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCGGGAAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000403772.8
ENST00000469360.5
ENST00000473582.1
ENST00000475420.5
ENST00000490680.5
ENST00000651721.2
CDS TCA 72 bp GAAGGGCAGCTTCCCGCAGTCCCACATTTTGAGAGCTaGCTGAATCAAAAAGGAACTTCAAACCTTCGGGCC +
Preference number: 6 (lower is better)
Translates to: EGQLPAVPHFES*LNQKGTSNLRA
Trigger: GGCCCGAAGGTTTGAAGTTCCTTTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCGGGAAGCTGCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000403772.8
ENST00000469360.5
ENST00000473582.1
ENST00000475420.5
ENST00000490680.5
ENST00000651721.2
CDS CCA 72 bp TTTCATCTGAATGTGAGGTTTTGGGATGACTTACTGTaGTCAGAGCTGTTCCCGGCTGCTCCAGTTGTGGGA +
Preference number: 6 (lower is better)
Translates to: FHLNVRFWDDLL*SELFPAAPVVG
Trigger: TCCCACAACTGGAGCAGCCGGGAACAGCTCTGACCACAGTAAGTCATCCCAAAACCTCACATTCAGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482642.1
CDS CAA 72 bp AGAGAGGGTGACGATCACTTCAAGGGCAAGCTGGCGTaGCATATTGTTGAGGCTAGTGTCTCCACACAACTT +
Preference number: 6 (lower is better)
Translates to: REGDDHFKGKLA*HIVEASVSTQL
Trigger: AAGTTGTGTGGAGACACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGTGATCGTCACCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000651721.2
CDS CAA 72 bp CCCACCCCAGGATCTGTGACTGTTCCCTTGAATCCCTaGTTTAGGGATTCTGTTCTCGCAATGATTGGGGAA +
Preference number: 6 (lower is better)
Translates to: PTPGSVTVPLNP*FRDSVLAMIGE
Trigger: TTCCCCAATCATTGCGAGAACAGAATCCCTAAACAAGGGATTCAAGGGAACAGTCACAGATCCTGGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475420.5
CDS CAA 72 bp GTTCTCCAAATCATTGTCTCTGACGTTTCCTTCCTCTaGGGTATGACTGTGGTGACGTCAGGAGACGAGCTA +
Preference number: 6 (lower is better)
Translates to: VLQIIVSDVSFL*GMTVVTSGDEL
Trigger: TAGCTCGTCTCCTGACGTCACCACAGTCATACCCAAGAGGAAGGAAACGTCAGAGACAATGATTTGGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481689.6
ENST00000482642.1
ENST00000489058.6
CDS CAA 72 bp ATGTTTCACTTGGCTAGGCTGTTGGAGCCCCGTTGTTaGGTCAAACAGCAGTCTAGATGTTGCTGGGAAAGT +
Preference number: 6 (lower is better)
Translates to: MFHLARLLEPRC*VKQQSRCCWES
Trigger: ACTTTCCCAGCAACATCTAGACTGCTGTTTGACCAAACAACGGGGCTCCAACAGCCTAGCCAAGTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493281.6
ENST00000496368.6
CDS CAA 90 bp GAGAGGGTGACGATCACTTCAAGGGCAAGCTGGCGTTGCATATTGTaGAGGCTAGTGTCTCCACACAACTTTAGACTTAGCTGTAGAGTT +
Preference number: 6 (lower is better)
Translates to: ERVTITSRASWRCIL*RLVSPHNFRLSCRV
Trigger: AACTCTACAGCTAAGTCTAAAGTTGTGTGGAGACACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGTGATCGTCACCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000651721.2
CDS CAA 90 bp TCAGAGAGGGTGACGATCACTTCAAGGGCAAGCTGGCGTTGCATATaGTTGAGGCTAGTGTCTCCACACAACTTTAGACTTAGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: SERVTITSRASWRCI*LRLVSPHNFRLSCR
Trigger: TCTACAGCTAAGTCTAAAGTTGTGTGGAGACACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGTGATCGTCACCCTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000651721.2
CDS CAA 72 bp ACGATCACTTCAAGGGCAAGCTGGCGTTGCATATTGTaGAGGCTAGTGTCTCCACACAACTTTAGACTTAGC +
Preference number: 6 (lower is better)
Translates to: TITSRASWRCIL*RLVSPHNFRLS
Trigger: GCTAAGTCTAAAGTTGTGTGGAGACACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGTGATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000651721.2
CDS CAA 90 bp AAGGATACTGTGATGGTTAGTTTTATGTTTCACTTGGCTAGGCTGTaGGAGCCCCGTTGTTTGGTCAAACAGCAGTCTAGATGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: KDTVMVSFMFHLARL*EPRCLVKQQSRCCW
Trigger: CCAGCAACATCTAGACTGCTGTTTGACCAAACAACGGGGCTCCAACAGCCTAGCCAAGTGAAACATAAAACTAACCATCACAGTATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493281.6
ENST00000496368.6
CDS CAA 72 bp TGTGGAAGGACCTCTTCAACGTTTACACAGTCAGGCTaGAACTTCATGATTTTCCCTACTGCTGAGATGCAG +
Preference number: 6 (lower is better)
Translates to: CGRTSSTFTQSG*NFMIFPTAEMQ
Trigger: CTGCATCTCAGCAGTAGGGAAAATCATGAAGTTCAAGCCTGACTGTGTAAACGTTGAAGAGGTCCTTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000468620.1
ENST00000469360.5
ENST00000490680.5
ENST00000491555.5
ENST00000493122.1
ENST00000651721.2
CDS CAA 72 bp GTGATGGTTAGTTTTATGTTTCACTTGGCTAGGCTGTaGGAGCCCCGTTGTTTGGTCAAACAGCAGTCTAGA +
Preference number: 6 (lower is better)
Translates to: VMVSFMFHLARL*EPRCLVKQQSR
Trigger: TCTAGACTGCTGTTTGACCAAACAACGGGGCTCCAACAGCCTAGCCAAGTGAAACATAAAACTAACCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493281.6
ENST00000496368.6
CDS CAA 90 bp GTTAGTTTTATGTTTCACTTGGCTAGGCTGTTGGAGCCCCGTTGTTaGGTCAAACAGCAGTCTAGATGTTGCTGGGAAAGTATCTTAGTT +
Preference number: 6 (lower is better)
Translates to: VSFMFHLARLLEPRC*VKQQSRCCWESILV
Trigger: AACTAAGATACTTTCCCAGCAACATCTAGACTGCTGTTTGACCAAACAACGGGGCTCCAACAGCCTAGCCAAGTGAAACATAAAACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493281.6
CDS TCA 72 bp GCATTGACATTTTCTTTGGTCTTAGAATCCGCAGACTaGATAACTCTTACCAGCAGGGGAAGTGCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: ALTFSLVLESAD*ITLTSRGSASV
Trigger: TACAGAAGCACTTCCCCTGCTGGTAAGAGTTATTCAGTCTGCGGATTCTAAGACCAAAGAAAATGTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000468620.1
ENST00000469360.5
ENST00000490680.5
ENST00000491555.5
ENST00000651721.2
CDS TCA 72 bp GGTTTTTGTGTAGAATGTTCTCCAAATCATTGTCTCTaGCGTTTCCTTCCTCTTGGGTATGACTGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: GFCVECSPNHCL*RFLPLGYDCGD
Trigger: GTCACCACAGTCATACCCAAGAGGAAGGAAACGTCAGAGACAATGATTTGGAGAACATTCTACACAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481689.6
ENST00000482642.1
ENST00000489058.6
CDS TCA 72 bp TCCCCAGCTCACGTAAGGCACAATACCAAAGAACAATaGGCCATCATGAAATCGTCATTGTTTCATACTTGG +
Preference number: 6 (lower is better)
Translates to: SPAHVRHNTKEQ*AIMKSSLFHTW
Trigger: CCAAGTATGAAACAATGACGATTTCATGATGGCTCATTGTTCTTTGGTATTGTGCCTTACGTGAGCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482642.1
CDS GCA 72 bp GAGCCCCGTTGTTTGGTCAAACAGCAGTCTAGATGTTaGTGGGAAAGTATAGCAAGTATCTTACAATTTGGA +
Preference number: 6 (lower is better)
Translates to: EPRCLVKQQSRC*WESIASILQFG
Trigger: TCCAAATTGTAAGATACTTGCTATACTTTCCCAGCAACATCTAGACTGCTGTTTGACCAAACAACGGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496368.6
CDS CAA 72 bp TCTGTCCCACGGCATTACAGGCTGCATACCTTACTCTaGGATGCTGGAAAATGTTCCCTTTCATTAGTAAAA +
Preference number: 6 (lower is better)
Translates to: SVPRHYRLHTLL*DAGKCSLSLVK
Trigger: TTTTACTAATGAAAGGGAACATTTTCCAGCATCCAAGAGTAAGGTATGCAGCCTGTAATGCCGTGGGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479736.1
CDS CAA 72 bp AACTTCTTTTGCATTAGCTTGAACAATTCTGAGATGTaGGCTGAGAAACACACTGGCCAATGGTCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: NFFCISLNNSEM*AEKHTGQWSLV
Trigger: TACCAAGGACCATTGGCCAGTGTGTTTCTCAGCCAACATCTCAGAATTGTTCAAGCTAATGCAAAAGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493492.2
CDS TCA 72 bp TCTTCTAGTCCTGCAGTTTTAATACCAAAGCTTTGCTaGTCTCCAAGGTTCACAAATTCCCAACCATCATCA +
Preference number: 6 (lower is better)
Translates to: SSSPAVLIPKLC*SPRFTNSQPSS
Trigger: TGATGATGGTTGGGAATTTGTGAACCTTGGAGATCAGCAAAGCTTTGGTATTAAAACTGCAGGACTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000490680.5
ENST00000491555.5
ENST00000651721.2
CDS TCA 72 bp GCTTTAGAAAGGGCACAACTTCACTCTTCTAGCATTTaGAGGACACAGCTTACGATTTTGAAGCATTTGCAT +
Preference number: 6 (lower is better)
Translates to: ALERAQLHSSSI*RTQLTILKHLH
Trigger: ATGCAAATGCTTCAAAATCGTAAGCTGTGTCCTTCAAATGCTAGAAGAGTGAAGTTGTGCCCTTTCTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470493.1
CDS CCA 72 bp ATGCAATGGATGTCACAACTTGTTCCAAAACTAACTTaGTGCCTTTCTGAATCAGCTCTTGAAGCTTCAGTA +
Preference number: 6 (lower is better)
Translates to: MQWMSQLVPKLT*CLSESALEASV
Trigger: TACTGAAGCTTCAAGAGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAACAAGTTGTGACATCCATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261574.10
ENST00000357602.7
ENST00000469360.5
ENST00000479736.1
ENST00000490680.5
ENST00000491555.5
ENST00000493492.2
ENST00000651721.2
CDS CCA 72 bp CCTTCAAACTTCGGAGAATTCCTAAACCAATATTTGTaGAGAGGGAGAATGGGGAGATTCAGATATGATTTG +
Preference number: 6 (lower is better)
Translates to: PSNFGEFLNQYL*RGRMGRFRYDL
Trigger: CAAATCATATCTGAATCTCCCCATTCTCCCTCTCCACAAATATTGGTTTAGGAATTCTCCGAAGTTTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357602.7
ENST00000421861.7
CDS CCA 72 bp GCTAAATTGTTCCTCAGTGCAGATGAAATTCTTAAATaGTTTCATCTGAATGTGAGGTTTTGGGATGACTTA +
Preference number: 6 (lower is better)
Translates to: AKLFLSADEILK*FHLNVRFWDDL
Trigger: TAAGTCATCCCAAAACCTCACATTCAGATGAAACCATTTAAGAATTTCATCTGCACTGAGGAACAATTTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481689.6
ENST00000482642.1
ENST00000489058.6