RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IPO4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196497

Ensembl transcript IDs: ENST00000354464.11, ENST00000557996.1, ENST00000558046.5, ENST00000558193.5, ENST00000558233.1, ENST00000558718.5, ENST00000558780.5, ENST00000559253.1, ENST00000559588.5, ENST00000559635.1, ENST00000560155.5, ENST00000560222.1, ENST00000560798.5, ENST00000560935.1, ENST00000561034.1, ENST00000561090.5, ENST00000561199.5, ENST00000561379.1, ENST00000561462.5, ENST00000642155.1, ENST00000642520.1, ENST00000643287.1, ENST00000643406.1, ENST00000643442.1, ENST00000643542.1, ENST00000643644.1, ENST00000643723.1, ENST00000644546.2, ENST00000644865.1, ENST00000645096.1, ENST00000645873.1, ENST00000646019.1, ENST00000646134.1, ENST00000646358.1, ENST00000646613.1, ENST00000646915.1, ENST00000647033.1, ENST00000647115.1

Found 1687 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGTTGCTCCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGTCGGCCG +
Preference number: 1 (lower is better)
Translates to: PVAPPPAVASGCSVV*GSARPQTGGSGGRP
Trigger: CGGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGGAGCAACGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR CCA 90 bp AGAGGCCCAGACCCAGCTGGCAGCATTCCTCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTGCCAGCACCCCCAGTGTCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: RGPDPAGSIPQPAAS*APPLLVPAPPVSPG
Trigger: GCCTGGAGACACTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp GGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCA +
Preference number: 1 (lower is better)
Translates to: GQGGPHALPARPSRR*HCFAPRGLPLGRCS
Trigger: TGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp TCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCGTATTCAGCCTGTGGAGCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: SPPAAAARAGMASPA*SSNMASYSACGARS
Trigger: TGACCTGGCTCCACAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR CCA 90 bp CGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGCGGCCTCATGGGCTCCCCCACTGCT +
Preference number: 1 (lower is better)
Translates to: RKSGSSTWSQRPRPS*QHSSASGLMGSPTA
Trigger: AGCAGTGGGGGAGCCCATGAGGCCGCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp CTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCACGACTCGGGCCAGGGCAGCCTGCAA +
Preference number: 1 (lower is better)
Translates to: LQHGHHHLAFPLPVH*LHVGWHDSGQGSLQ
Trigger: TTGCAGGCTGCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp GAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGC +
Preference number: 1 (lower is better)
Translates to: ETGKEWGKGVSPSRG*QGRDGLSSVLQQHG
Trigger: GCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp GGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCA +
Preference number: 1 (lower is better)
Translates to: GGPHALPARPSRRWH*FAPRGLPLGRCSTA
Trigger: TGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp ATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCGTATTCAGCCT +
Preference number: 1 (lower is better)
Translates to: MGQRSLPQPRLPGQG*PLQRAPATWRRIQP
Trigger: AGGCTGAATACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp CAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAACAGCACAGGGAGCAGCCGAGACAC +
Preference number: 1 (lower is better)
Translates to: QHAHPEDGIASHLGV*LLGGAQQHREQPRH
Trigger: GTGTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp CACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGCAGCCTGCAAAGCAGCAGTGTTGGG +
Preference number: 1 (lower is better)
Translates to: HHLAFPLPVHCLHVG*HDSGQGSLQSSSVG
Trigger: CCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp CGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGTGGAGCCAGGTCAGGGGCTGATCATC +
Preference number: 1 (lower is better)
Translates to: RLPGQGWPLQRAPAT*RRIQPVEPGQGLII
Trigger: GATGATCAGCCCCTGACCTGGCTCCACAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR TCA 90 bp GGCGGTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTGAATAGTCTCTGCCAAGGTCCCCAC +
Preference number: 1 (lower is better)
Translates to: GGAQQHREQPRHKLG*GSTQALNSLCQGPH
Trigger: GTGGGGACCTTGGCAGAGACTATTCAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp CGCCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGG +
Preference number: 1 (lower is better)
Translates to: RQLRQTARPAPGVQL*AGMGSRSAKPLPTW
Trigger: CCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp GGGCTCTGGTTTCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGC +
Preference number: 1 (lower is better)
Translates to: GLWFPGGTGHQQAGK*PTDVVTDTIMSLPR
Trigger: GCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR CCA 90 bp GCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCCAGCTGGCAGCATTCCTCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: ANRLYVQRRKSGSST*SQRPRPSWQHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp CGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: RRWHCFAPRGLPLGR*STAQGAAETQTGLR
Trigger: CCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp GCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATC +
Preference number: 1 (lower is better)
Translates to: APSDSTASTRSPALR*YGLSLRKASSNMGI
Trigger: GATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGG +
Preference number: 1 (lower is better)
Translates to: PIPKMALLRTSGSAS*AVLNSTGSSRDTNW
Trigger: CCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp CCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACACTT +
Preference number: 1 (lower is better)
Translates to: PTSPRVSFRSRRSSR*WGWKASGREVTTTL
Trigger: AAGTGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR TCA 90 bp GGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCTaGATAGTCTCTGCCAAGGTCCCCACTGCAAAGGACTTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: GSSRDTNWAEAAPRP*IVSAKVPTAKDFSA
Trigger: GGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp TTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCAGCT +
Preference number: 1 (lower is better)
Translates to: LRTTCEGSSRPLHTI*SSGGSSLCLMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp GTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTG +
Preference number: 1 (lower is better)
Translates to: VRQHGQHQESSFALV*ALAPQSLFQHGHQL
Trigger: CAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp ACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACACTTAGC +
Preference number: 1 (lower is better)
Translates to: TSPRVSFRSRRSSRW*GWKASGREVTTTLS
Trigger: GCTAAGTGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR GCA 90 bp TCTGAGAACTGGCCCAGGGCAAACAGCGCAGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTGGG +
Preference number: 1 (lower is better)
Translates to: SENWPRANSAALRTT*EGSSRPLHTICSSG
Trigger: CCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCAGTTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp AGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAGAGCCTCATGGGCTGCCTTCCGCAC +
Preference number: 1 (lower is better)
Translates to: SSVGFRGAALTGLVQ*TAKLTQSLMGCLPH
Trigger: GTGCGGAAGGCAGCCCATGAGGCTCTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTG +
Preference number: 1 (lower is better)
Translates to: QAVSPELLESCRCAV*PGTSGAATVRPWCL
Trigger: CAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR CCA 90 bp CCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAGGTCACCACCACACTTAGCAGCAAA +
Preference number: 1 (lower is better)
Translates to: PRVSFRSRRSSRWWG*KASGREVTTTLSSK
Trigger: TTTGCTGCTAAGTGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR CCA 90 bp GTGGAACGCAGTGACAGCAGCATGAGCGTGGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCCATCAGACCCGATAAGGCTGCAAAT +
Preference number: 1 (lower is better)
Translates to: VERSDSSMSVVICSK*GARPSPIRPDKAAN
Trigger: ATTTGCAGCCTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCACCACGCTCATGCTGCTGTCACTGCGTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp GCTGTAGGTTTTCTGAGAACTGGCCCAGGGCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGCACACAATCT +
Preference number: 1 (lower is better)
Translates to: AVGFLRTGPGQTAQH*VQLARGPPGPCTQS
Trigger: AGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 90 bp GAATGTGAGGACTTCAGAGAGGTAGGGGGTGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTT +
Preference number: 1 (lower is better)
Translates to: ECEDFREVGGDDRHL*LQQFIQSLKGLTGL
Trigger: AAGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATCACCCCCTACCTCTCTGAAGTCCTCACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 90 bp TCAAGATCCCGAGAGAAGTGGGTAGGTACTTACTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGGGACTTGAGGCTCTCCCGTTGCTCC +
Preference number: 1 (lower is better)
Translates to: SRSREKWVGTYSVSL*RAVRIRDLRLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTAAGTACCTACCCACTTCTCTCGGGATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR GCA 90 bp GGCCTTGTGCAGTGCACAGCAAAACTGACCCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTGAGGGCACTCCAGCAGTTTAAATAC +
Preference number: 1 (lower is better)
Translates to: GLVQCTAKLTQSLMG*LPHIQVRALQQFKY
Trigger: GTATTTAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTGGGTCAGTTTTGCTGTGCACTGCACAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp TGGGCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTaGCTAGGTGGTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGG +
Preference number: 1 (lower is better)
Translates to: WALGSPQNSPGHSRP*LGGVCVQEAPTSSR
Trigger: CCTACTTGAAGTCGGTGCCTCTTGGACACACACACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 90 bp CACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTaGAGCCGAAAAGGAAGGCAGAAACCTAGACAAAGTCGTCAAGAT +
Preference number: 1 (lower is better)
Translates to: HLASRTEVPAPQVPA*SRKGRQKPRQSRQD
Trigger: ATCTTGACGACTTTGTCTAGGTTTCTGCCTTCCTTTTCGGCTCCAGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR-3UTR TCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: AAAARAGMASPACSSNMARHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCATGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: GAKESPPAAAARAGMASPWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...TGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: VRVPQLRSTPVRASSTAIPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 2 (lower is better)
Translates to: GAKESPPAAAARAGMASPMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...TGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCGCAGGTGCTCCATGATGGCAGGGAAGTAGGGCAGCAGCGAGGCCTGGGCAGCGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 2 (lower is better)
Translates to: PQVLHDGREVGQQRGLGSGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...GCTGCCCAGGCCTCGCTGCTGCCCTACTTCCCTGCCATCATGGAGCACCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 90 bp GGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGC +
Preference number: 2 (lower is better)
Translates to: GWPPCSASTPIPKMA*LRTSGSASWAVLNS
Trigger: GCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 2 (lower is better)
Translates to: RASSTAITTWRSRSLFTAAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATGGCACGACTCGGGCCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 2 (lower is better)
Translates to: LAFPLPVHCLHVGWHDSGHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...GCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 2 (lower is better)
Translates to: AAAARAGMASPACSSNMASLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 2 (lower is better)
Translates to: RASSTAITTWRSRSLFTAVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: VAMAPRALTASSLARGLLPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...CAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR CAA 90 bp TGGGCAGCCGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGGTTCCTCAGAAGCTGCAGCATGCAT +
Preference number: 2 (lower is better)
Translates to: WAAVAMAPRALTASS*ARGLLGFLRSCSMH
Trigger: ATGCATGCTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACGGCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 2 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 2 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCTGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: WAGWPPCSASTPIPKMALRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGTCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 2 (lower is better)
Translates to: VAMAPRALTASSLARGLLSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...CAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR TCA 90 bp GTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: VAMAPRALTASSLARGLLAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...CAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATGGCACGACTCGGGCCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 2 (lower is better)
Translates to: LAFPLPVHCLHVGWHDSGPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...GCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGCTGTGGGTACTGTGCTaGAGCAGCTGCAAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: AAAARAGMASPACSSNMALWVLC*SSCKSC
Trigger: ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAG...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR GCA 90 bp GGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 2 (lower is better)
Translates to: GAKESPPAAAARAGMASPTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...TGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGCGAGAGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 2 (lower is better)
Translates to: SERHIFSAEVGSHGGQSASRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...CGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCTCTCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 2 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGGTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: ALLRTSGSASWAVLNSTGSSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...CCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCGCAGGTGCTCCATGATGGCAGGGAAGTAGGGCAGCAGCGAGGCCTGGGCAGCCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PQVLHDGREVGQQRGLGSQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...GCTGCCCAGGCCTCGCTGCTGCCCTACTTCCCTGCCATCATGGAGCACCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 2 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPSGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGGGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 2 (lower is better)
Translates to: ALLRTSGSASWAVLNSTGVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...CCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCACGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: GAKESPPAAAARAGMASPRAPAT*RRIQPD
Trigger: ATCAGGCTGAATACGACGCCATGTTGCTGGAGCACG...TGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
3UTR-3UTR TCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 2 (lower is better)
Translates to: CSASTPIPKMALLRTSGSAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 2 (lower is better)
Translates to: SSPGEPTSPRVSFRSRRSSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...GCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTCACTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 2 (lower is better)
Translates to: PHSTLRLELKSLPHKSQPSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...AGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR-3UTR CCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: RANSAALRTTCEGSSRPLGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 2 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPNMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCGTAGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 2 (lower is better)
Translates to: GCQGRDGLSSVLQQHGVVGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...TACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVSQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 2 (lower is better)
Translates to: RKPAKNGAKESPPAAAARSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GGGCAGCCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: GQPAKQQCWVPRGSFDRPPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...AGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR CAA 90 bp TCGCCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATG +
Preference number: 2 (lower is better)
Translates to: SPAPSDSTASTRSPA*RWYGLSLRKASSNM
Trigger: CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTG +
Preference number: 2 (lower is better)
Translates to: AHPEDGIASHLGVCL*GGAQQHREQPRHKL
Trigger: CAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 90 bp CTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTaGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: LVGLAINRRASAPQM*SRTRSCRSRARRGK
Trigger: TTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 2 (lower is better)
Translates to: RSNGSQGAHSQLLGPGTADDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...AGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 2 (lower is better)
Translates to: LAHNLQQWGQQSLPDVVAAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...GGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 2 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGAPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTGGAGCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 2 (lower is better)
Translates to: LHLASRTEVPAPQVPAWSGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...GCTCCAGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR-3UTR GCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 2 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 2 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPLPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 2 (lower is better)
Translates to: CCLARNVRSSNSAALVSGVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: WAGWPPCSASTPIPKMALGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 2 (lower is better)
Translates to: VCVSKRHRLQVGEEQWHYSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...GTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: AGSILSGLAAACSLGEAQSSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATGGCACGACTCGGGCAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 2 (lower is better)
Translates to: LAFPLPVHCLHVGWHDSGSFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...GCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGCACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: RKPAKNGAKESPPAAAARHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGTGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: AGSILSGLAAACSLGEAQWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 2 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 2 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGARGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 2 (lower is better)
Translates to: RSNGSQGAHSQLLGPGTAMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...AGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CGAGGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 2 (lower is better)
Translates to: RGVLQALAHNLQQWGQQSGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...AGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: RASSTAITTWRSRSLFTASREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GGGCAGCCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: GQPAKQQCWVPRGSFDRPPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...AGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: AAAARAGMASPACSSNMASPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 2 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 2 (lower is better)
Translates to: DQSLHGHDQLGHQHPSERRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...CCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGACGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: RHIFSAEVGSHGGQSAQGRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...TCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 2 (lower is better)
Translates to: GSAQAEGPHGLLTGIPAGGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...ACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 2 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHLPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 90 bp AACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATG +
Preference number: 2 (lower is better)
Translates to: NSAALRTTCEGSSRP*HTICSSGGSSLCLM
Trigger: CATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 90 bp CAGGGCAGCCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGCACAGCAAAACTGACCCAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: QGSLQSSSVGFRGAA*TGLVQCTAKLTQSL
Trigger: GAGGCTCTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: PKMALLRTSGSASWAVLNPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: QAVSPELLESCRCAVWPGRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: AGSILSGLAAACSLGEAQEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCGTAGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 2 (lower is better)
Translates to: GCQGRDGLSSVLQQHGVVGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...TACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 2 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGAQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GGGCAGCCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: GQPAKQQCWVPRGSFDRPRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...AGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 2 (lower is better)
Translates to: CMAMISLGTNIRARGTSSRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGGGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 2 (lower is better)
Translates to: ALLRTSGSASWAVLNSTGVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...CCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GTGATCTGTTCCAAGTGGGGCGCCAGGCCCTCACCCATCAGACCCGATAAGGCTAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 2 (lower is better)
Translates to: VICSKWGARPSPIRPDKASLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...AGCCTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHSQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 2 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 2 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR TCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: RASSTAITTWRSRSLFTAGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: RANSAALRTTCEGSSRPLPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCGTCGTATTCAGCCTaGTCATCATCTTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RKPAKNGAKESPPAAAARASYSA*SSSSSS
Trigger: GGAAGAGGAAGATGATGATCAGGCTGAATACGACGC...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
3UTR-3UTR GCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: AGSILSGLAAACSLGEAQPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 2 (lower is better)
Translates to: RKPAKNGAKESPPAAAARGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 2 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 2 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 2 (lower is better)
Translates to: CCLARNVRSSNSAALVSGPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 2 (lower is better)
Translates to: PKMALLRTSGSASWAVLNALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCACGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: CMAMISLGTNIRARGTSSRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: PCQQAVSPELLESCRCAVRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 2 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCANMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 2 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCASFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: PCQQAVSPELLESCRCAVRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 2 (lower is better)
Translates to: PCQQAVSPELLESCRCAVTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 90 bp GGCTGTAGGTTTTCTGAGAACTGGCCCAGGGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGCACACAATC +
Preference number: 2 (lower is better)
Translates to: GCRFSENWPRANSAA*RTTCEGSSRPLHTI
Trigger: GATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCTACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 2 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 2 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 2 (lower is better)
Translates to: RANSAALRTTCEGSSRPLDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 2 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AAATCCTCACTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 2 (lower is better)
Translates to: KSSLHLASRTEVPAPQVPGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...TGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAGTGAGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR-3UTR GCA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 2 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 2 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGATEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGATGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: QAVSPELLESCRCAVWPGCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TCAGACCCGATAAGGCTGCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SDPIRLQIGCTCSAASQGQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTATCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 2 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR TCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 2 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACACCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: RVCMAMISLGTNIRARGTPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...TGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RKPAKNGAKESPPAAAARSPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: QQAVSPELLESCRCAVWPRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 2 (lower is better)
Translates to: ARNVRSSNSAALVSGGILPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: TTCTAKCLGVSPISSISNGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACCTCCCTTGAATAGCTGCCACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: APTSSRRGAVALPPLNSCHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...GCAGCTATTCAAGGGAGGTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 2 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCARFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 2 (lower is better)
Translates to: QAVSPELLESCRCAVWPGRFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: VCVSKRHRLQVGEEQWHYQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...GTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 2 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 2 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRRPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR CCA 90 bp TCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACCTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: SWWDWPSTGGQVPHRCCHLPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...GTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR TCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 2 (lower is better)
Translates to: IRVCMAMISLGTNIRARGRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: PKMALLRTSGSASWAVLNGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp ACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAAGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: TYAYRIAQGHISSYLQAEAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...TTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCTGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 2 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCACCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: CMAMISLGTNIRARGTSSPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 2 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAAGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 2 (lower is better)
Translates to: PCQQAVSPELLESCRCAVHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 2 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPSPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: NVRSSNSAALVSGGILLSGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CTAGGTGGTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: LGGVCVQEAPTSSRRGAVKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...CACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACACCACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: PCQQAVSPELLESCRCAVCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: AGSILSGLAAACSLGEAQGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCACCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 2 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAATGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCACTGTGGGTACTGTGCTaGAGCAGCTGCAAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: NVRSSNSAALVSGGILLSLWVLC*SSCKSC
Trigger: ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAG...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR GCA 90 bp CTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAATGCCGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 2 (lower is better)
Translates to: LIVKQKEGAAPVILRHNAGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...GGCATTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 2 (lower is better)
Translates to: SFALVWALAPQSLFQHGHTCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CAGCGTGCTCCAGCAACATGGCGTCGTATTCAGCCTGATCATCATCTTCCTCTTGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: QRAPATWRRIQPDHHLPLGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...AAGAGGAAGATGATGATCAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
3UTR-3UTR GCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 2 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AACATGGCGTCGTATTCAGCCTGTGGAGCCAGGTCAGGGGCTGATCATCATCTTCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 2 (lower is better)
Translates to: NMASYSACGARSGADHHLHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...AAGATGATGATCAGCCCCTGACCTGGCTCCACAGGCTGAATACGACGCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR CCA 90 bp ACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAAGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: TYAYRIAQGHISSYLQAEGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...TTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 2 (lower is better)
Translates to: QAVSPELLESCRCAVWPGDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 2 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCTTGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: LVQRNAWESPPSAQSPTLAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...AAGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 2 (lower is better)
Translates to: PCQQAVSPELLESCRCAVWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp AAATCCTCACTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCATACTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 2 (lower is better)
Translates to: KSSLHLASRTEVPAPQVPYSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTA...TGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAGTGAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR-3UTR GCA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAAGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 2 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 2 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp CTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCTTATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 2 (lower is better)
Translates to: LVQRNAWESPPSAQSPTLIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...AAGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 2 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 2 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
3UTR-3UTR TCA 90 bp TCTTCCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 2 (lower is better)
Translates to: SSPSLSSSNRRKELLPSYDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...GTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp GTGTGCAGCAAGGGTGGCAGGAGACGATTCTTCAGTAAGGCCTTGCTCTTGACTAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: VCSKGGRRRFFSKALLLTSREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...AGTCAAGAGCAAGGCCTTACTGAAGAATCGTCTCCTGCCACCCTTGCTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp ACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAAAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: TYAYRIAQGHISSYLQAESREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...TTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: TTCTAKCLGVSPISSISNMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
3UTR CAA 90 bp TTGACCAAGAAAGTGAGGCAGCAGAGAATACGTATGCGTATCGCATaGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAATGTGAGG +
Preference number: 2 (lower is better)
Translates to: LTKKVRQQRIRMRIA*PRATFLATSRQNVR
Trigger: CCTCACATTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTGCCTCACTTTCTTGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR GCA 90 bp CTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCTTAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LVQRNAWESPPSAQSPTLSREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...AAGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CCA 90 bp GACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAACTTTAGTCTTCAAACCACAAGTCCCAGCCTaGAGCCGAAAAGGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: DLGLADHHHPSSRTLVFKPQVPA*SRKGRQ
Trigger: CTGCCTTCCTTTTCGGCTCCAGGCTGGGACTTGTGG...TTTGAAGACTAAAGTTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR-3UTR TCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
3UTR GCA 72 bp CCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAAACTGGCGGATCTGGG +
Preference number: 3 (lower is better)
Translates to: PPPAVASGCSVV*GSARPQTGGSG
Trigger: CCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR CCA 72 bp GACCCAGCTGGCAGCATTCCTCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTGCCAGCACCCCCAGTG +
Preference number: 3 (lower is better)
Translates to: DPAGSIPQPAAS*APPLLVPAPPV
Trigger: CACTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTGAGGAATGCTGCCAGCTGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp AGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCGT +
Preference number: 3 (lower is better)
Translates to: RSLPQPRLPGQG*PLQRAPATWRR
Trigger: ACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCATTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: GAKESPPAAAARAGMASPFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...TGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp GGGTCGTCTACCTGGTCGCAGAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGCGGCCTCATGGGCTCC +
Preference number: 3 (lower is better)
Translates to: GSSTWSQRPRPS*QHSSASGLMGS
Trigger: GGAGCCCATGAGGCCGCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCTCTGCGACCAGGTAGACGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: VRVPQLRSTPVRASSTAISIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: AAAARAGMASPACSSNMACKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 72 bp CTGTTTCTCTCTGCAGGGCCGTCAGGATCAGGGACTTaGGGCTCTCCCGTTGCTCCGCCGCCAGCCGTCGCC +
Preference number: 3 (lower is better)
Translates to: LFLSAGPSGSGT*GSPVAPPPAVA
Trigger: GGCGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR GCA 72 bp GGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCACGACTCGGGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: GHHHLAFPLPVH*LHVGWHDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp AAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAG +
Preference number: 3 (lower is better)
Translates to: KEWGKGVSPSRG*QGRDGLSSVLQ
Trigger: CTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCGTATTCAGCCTGTGGA +
Preference number: 3 (lower is better)
Translates to: AAAARAGMASPA*SSNMASYSACG
Trigger: TCCACAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR CCA 72 bp GGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: GPHALPARPSRR*HCFAPRGLPLG
Trigger: CCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: RSNGSQGAHSQLLGPGTASIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...AGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp CCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCTGCAGCATGCATTCCA +
Preference number: 3 (lower is better)
Translates to: PGRSQPAPWPGD*WGSSEAAACIP
Trigger: TGGAATGCATGCTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp CATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGC +
Preference number: 3 (lower is better)
Translates to: HALPARPSRRWH*FAPRGLPLGRC
Trigger: GCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR CCA 72 bp GGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCAGC +
Preference number: 3 (lower is better)
Translates to: GVLQALAHNLQQ*GQQSLPDVVAS
Trigger: GCTGGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp CTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCCAGCTGGCAGCATTCC +
Preference number: 3 (lower is better)
Translates to: LYVQRRKSGSST*SQRPRPSWQHS
Trigger: GGAATGCTGCCAGCTGGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp GCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGCAGCCTGCAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: AFPLPVHCLHVG*HDSGQGSLQSS
Trigger: GCTGCTTTGCAGGCTGCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp GGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGTGGAGCCAGGTCAGGGG +
Preference number: 3 (lower is better)
Translates to: GQGWPLQRAPAT*RRIQPVEPGQG
Trigger: CCCCTGACCTGGCTCCACAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR CCA 72 bp AGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACC +
Preference number: 3 (lower is better)
Translates to: RVSFRSRRSSRW*GWKASGREVTT
Trigger: GGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR CCA 72 bp CCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACC +
Preference number: 3 (lower is better)
Translates to: PRVSFRSRRSSR*WGWKASGREVT
Trigger: GGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GTGGTCGCCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 3 (lower is better)
Translates to: VVASSVRQHGQHQESSFAMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCGACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: PKMALLRTSGSASWAVLNGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGGGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: ALLRTSGSASWAVLNSTGANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...CCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: PCQQAVSPELLESCRCAVLTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHLTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: PKMALLRTSGSASWAVLNFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp CGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTT +
Preference number: 3 (lower is better)
Translates to: RQTARPAPGVQL*AGMGSRSAKPL
Trigger: AAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp ACTTGCGAGGGGTCCTCCAGGCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGG +
Preference number: 3 (lower is better)
Translates to: TCEGSSRPLHTI*SSGGSSLCLMW
Trigger: CCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp CACGGCCAGCACCAGGAGTCCAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGG +
Preference number: 3 (lower is better)
Translates to: HGQHQESSFALV*ALAPQSLFQHG
Trigger: CCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp GACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAAC +
Preference number: 3 (lower is better)
Translates to: DSTASTRSPALR*YGLSLRKASSN
Trigger: GTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp AAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACAGGGAGCAGCCGAGAC +
Preference number: 3 (lower is better)
Translates to: KMALLRTSGSAS*AVLNSTGSSRD
Trigger: GTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp TCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAGGTCACCACCACACTT +
Preference number: 3 (lower is better)
Translates to: SFRSRRSSRWWG*KASGREVTTTL
Trigger: AAGTGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
3UTR-3UTR CAA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRCKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 3 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 72 bp GCACCAACATCCGAGCGAGAGGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGG +
Preference number: 3 (lower is better)
Translates to: APTSEREAHLQC*GREPWWSECAG
Trigger: CCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
3UTR GCA 72 bp TGGCCCAGGGCAAACAGCGCAGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCCTTGCACACAATCTGC +
Preference number: 3 (lower is better)
Translates to: WPRANSAALRTT*EGSSRPLHTIC
Trigger: GCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp GGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAGAGCCTCATGGGCTGC +
Preference number: 3 (lower is better)
Translates to: GFRGAALTGLVQ*TAKLTQSLMGC
Trigger: GCAGCCCATGAGGCTCTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp CATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCAGCCGAGACACAAACT +
Preference number: 3 (lower is better)
Translates to: HCFAPRGLPLGR*STAQGAAETQT
Trigger: AGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: WAGWPPCSASTPIPKMALALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGAANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TCTTCCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: SSPSLSSSNRRKELLPSYLTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...GTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 3 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 72 bp ACCCCCAGTGTCTCCAGGCTCTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTTAACAGGAATTCCCGC +
Preference number: 3 (lower is better)
Translates to: TPSVSRLWICTG*RSSRPVNRNSR
Trigger: GCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCAGAGCCTGGAGACACTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 72 bp CAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTGAATAGTCTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: QQHREQPRHKLG*GSTQALNSLCQ
Trigger: TTGGCAGAGACTATTCAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp TTTCTGAGAACTGGCCCAGGGCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: FLRTGPGQTAQH*VQLARGPPGPC
Trigger: GCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp CAGTGCACAGCAAAACTGACCCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTGAGGGCACTCCAGCAG +
Preference number: 3 (lower is better)
Translates to: QCTAKLTQSLMG*LPHIQVRALQQ
Trigger: CTGCTGGAGTGCCCTCACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTGGGTCAGTTTTGCTGTGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp AGTGACAGCAGCATGAGCGTGGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCCATCAGACCCGATAAG +
Preference number: 3 (lower is better)
Translates to: SDSSMSVVICSK*GARPSPIRPDK
Trigger: CTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCACCACGCTCATGCTGCTGTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp AGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCT +
Preference number: 3 (lower is better)
Translates to: SPELLESCRCAV*PGTSGAATVRP
Trigger: AGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp AGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTGCTCCATGATGGCAGGGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 3 (lower is better)
Translates to: RSSRPVNRNSRRCSMMAGMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CCCTGCCATCATGGAGCACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTGGTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 3 (lower is better)
Translates to: RWYGLSLRKASSNMGISWCTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...CCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 3 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 3 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 3 (lower is better)
Translates to: AGSILSGLAAACSLGEAQSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGGAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: ALLRTSGSASWAVLNSTGSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...CCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 3 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRTRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGCAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 3 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 72 bp GACTTCAGAGAGGTAGGGGGTGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAAAGCCTCAAGGGCCTC +
Preference number: 3 (lower is better)
Translates to: DFREVGGDDRHL*LQQFIQSLKGL
Trigger: GAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATCACCCCCTACCTCTCTGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp CCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCACAATGCCCTCGGTGG +
Preference number: 3 (lower is better)
Translates to: PHHSHRQTEGRS*SRHTEAQCPRW
Trigger: CCACCGAGGGCATTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp ACCCAGGCCCTGAATAGTCTCTGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTT +
Preference number: 3 (lower is better)
Translates to: TQALNSLCQGPH*KGLLCHCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp GGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGATCATCATCTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: GQGWPLQRAPAT*RRIQPDHHLPL
Trigger: AAGAGGAAGATGATGATCAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
3UTR-3UTR CAA 90 bp TCAGACCCGATAAGGCTGCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 3 (lower is better)
Translates to: SDPIRLQIGCTCSAASQGRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGACAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: QAVSPELLESCRCAVWPGQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 72 bp GTCATACTGAGGCACAATGCCCTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGTGATCTGTTCCAAGTG +
Preference number: 3 (lower is better)
Translates to: VILRHNALGGTQ*QQHERGDLFQV
Trigger: CACTTGGAACAGATCACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR TCA 72 bp CCTTGGTGTCTGGTGGGATCTTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAAGCTCGGGAGCCACAT +
Preference number: 3 (lower is better)
Translates to: PWCLVGSCCQPE*GCRYAEAREPH
Trigger: ATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACAAGATCCCACCAGACACCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR GCA 72 bp CGAGAGAAGTGGGTAGGTACTTACTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGGGACTTGAGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: REKWVGTYSVSL*RAVRIRDLRLS
Trigger: GGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTAAGTACCTACCCACTTCTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR CCA 72 bp GGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTaGCTAGGTGGTGTGTGTGTCCAAGAGGCACCGACT +
Preference number: 3 (lower is better)
Translates to: GSPQNSPGHSRP*LGGVCVQEAPT
Trigger: AGTCGGTGCCTCTTGGACACACACACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 3 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: AGSILSGLAAACSLGEAQSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp GGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 3 (lower is better)
Translates to: GSAQAEGPHGLLTGIPAGQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...ACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 3 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 3 (lower is better)
Translates to: PCQQAVSPELLESCRCAVVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR GCA 72 bp TCACAGGCCTTTGCCTCATCTATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTGGGCACCAACATCCGA +
Preference number: 3 (lower is better)
Translates to: SQAFASSMGIRV*MAMISLGTNIR
Trigger: TCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATCCCCATAGATGAGGCAAAGGCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: CCLARNVRSSNSAALVSGSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 3 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR GCA 72 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGCACACCAATAATGGCA +
Preference number: 3 (lower is better)
Translates to: PRSPLQRTSLPL*SPVLSCTPIMA
Trigger: TGCCATTATTGGTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp TCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTaGAGCCGAAAAGGAAGGCAGAAACCTAGACAAAGT +
Preference number: 3 (lower is better)
Translates to: SRTEVPAPQVPA*SRKGRQKPRQS
Trigger: ACTTTGTCTAGGTTTCTGCCTTCCTTTTCGGCTCCAGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR-3UTR CAA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp AGTCCAGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 3 (lower is better)
Translates to: SPALRWYGLSLRKASSNMFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 3 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp TCTTCCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 3 (lower is better)
Translates to: SSPSLSSSNRRKELLPSYQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...GTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CCA 72 bp GTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCTCAATCTCCAACTCTT +
Preference number: 3 (lower is better)
Translates to: VPACPQLVQRNA*ESPPSAQSPTL
Trigger: AAGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAAAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 3 (lower is better)
Translates to: QQRIRMRIALPRATFLATFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR-3UTR CAA 90 bp AGTCTTATTCTTCTGACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAAAATCCTCACTCCACCTaGCGTCTAGAACTGAAGTCC +
Preference number: 3 (lower is better)
Translates to: SLILLTWVWQIIITLPQENPHST*RLELKS
Trigger: GGACTTCAGTTCTAGACGCAAGGTGGAGTGAGGATT...TTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTCAGAAGAATAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR TCA 72 bp TGTTCAAGCAGAAAACAAGCTGCTTTTATTACAGTATaGTGTCATGACTCATTTGTAACAGATCCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: CSSRKQAAFITV*CHDSFVTDPAS
Trigger: TGAGGCTGGATCTGTTACAAATGAGTCATGACATCATACTGTAATAAAAGCAGCTTGTTTTCTGCTTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000561462.5
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: VRVPQLRSTPVRASSTAISPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTTGCTCCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTGCGGGTCAGCGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RCSAASRRQRVFSRLRVSANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...GCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGGAGCAACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR TCA 90 bp GGCCGTCAGGATCAGGGACTTGAGGCTCTCCCGTTGCTCCGCCGCCAGCCGTCGCTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GRQDQGLEALPLLRRQPSLHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...CGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR GCA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VRVPQLRSTPVRASSTAIPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: AAAARAGMASPACSSNMAVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGTTGCTCCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTGCGGGTCAGCGGGGAAGCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RCSAASRRQRVFSRLRVSGEADG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGCTTCCCC...GCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGGAGCAACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VRVPQLRSTPVRASSTAISTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RASSTAITTWRSRSLFTAPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: EEAPGGGVGRPRAGRSPPPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...TGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCGCAGGTGCTCCATGATGGCAGGGAAGTAGGGCAGCAGCGAGGCCTGGGCAGCCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PQVLHDGREVGQQRGLGSHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...GCTGCCCAGGCCTCGCTGCTGCCCTACTTCCCTGCCATCATGGAGCACCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRSPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGGCCCGGCTGACTCCATaGCAGCAACTGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RVFSRLRVSTAANWRIWGARLTP*QQLSRR
Trigger: GCGGCGGCTCAGTTGCTGCCATGGAGTCAGCCGGGC...CCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCAAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: EEAPGGGVGRPRAGRSPPSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...TGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RVFSRLRVSTAANWRIWGSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...CCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp AAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KPKKLPVVGLEGLGPGGHSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...GTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TCTCTGCAGGGCCGTCAGGATCAGGGACTTGAGGCTCTCCCGTTGCTCCGCCGCCTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SLQGRQDQGLEALPLLRRLHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...GCGGCGGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR GCA 90 bp AGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCAGCTCCCGTAGGAGCTaGTCTAGCCCGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SRRSSRWWGWKASGREVTSSRRS*SSPADS
Trigger: GGAGTCAGCCGGGCTAGAGCAGCTCCTACGGGAGCT...GGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRSPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTSHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACATCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: RSSRWWGWKASGREVTTTSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...TGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTCTGCAGGGCCGTCAGGATCAGGGACTTGAGGCTCTCCCGTTGCTCCGCCGCGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLQGRQDQGLEALPLLRRANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...GCGGCGGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VRVPQLRSTPVRASSTAISSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RASSTAITTWRSRSLFTASQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGTCGGCCGCCGAGCCACAAGTCCCAGCCTaGAGCCGAAAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLRVSTAANWRIWGSAAEPQVPA*SRKGRQ
Trigger: CTGCCTTCCTTTTCGGCTCCAGGCTGGGACTTGTGG...CTCGGCGGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp CGTTGCTCCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTGCGGGTCAGCGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RCSAASRRQRVFSRLRVSARRTI*SCSVAW
Trigger: CCAGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...GCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGGAGCAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GTCGCCAGCGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGAAGCTGTTCCGTGGCCTaGGGGGAAGCCGACGGATGC +
Preference number: 4 (lower is better)
Translates to: VASGCSVVCGSARPQTGGSCSVA*GEADGC
Trigger: GCATCCGTCGGCTTCCCCCCAGGCCACGGAACAGCT...TCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GCGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGAGCTGTTCCGTGGCCTaGGGGGAAGCCGACGGATGC +
Preference number: 4 (lower is better)
Translates to: AGVQSSAGQHGRKLADLGSCSVA*GEADGC
Trigger: GCATCCGTCGGCTTCCCCCCAGGCCACGGAACAGCT...CCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR TCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AAAARAGMASPACSSNMAEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCLHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: RVFSRLRVSTAANWRIWGGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...CCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR GCA 90 bp AGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACAGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSSRWWGWKASGREVTTTGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...TGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp CCGCAGGTGCTCCATGATGGCAGGGAAGTAGGGCAGCAGCGAGGCCTGGGCAGCGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQVLHDGREVGQQRGLGSGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...GCTGCCCAGGCCTCGCTGCTGCCCTACTTCCCTGCCATCATGGAGCACCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCTCTGCAGGGCCGTCAGGATCAGGGACTTGAGGCTCTCCCGTTGCTCCGCCGCGGGGAAGCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLQGRQDQGLEALPLLRRGEADG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGCTTCCCC...GCGGCGGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCGCCCGGCTGACTCCATaGCAGCAACTGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAARLTP*QQLSRR
Trigger: GCGGCGGCTCAGTTGCTGCCATGGAGTCAGCCGGGC...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RSNGSQGAHSQLLGPGTAPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...AGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCGCAGGTGCTCCATGATGGCAGGGAAGTAGGGCAGCAGCGAGGCCTGGGCAGCGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PQVLHDGREVGQQRGLGSVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...GCTGCCCAGGCCTCGCTGCTGCCCTACTTCCCTGCCATCATGGAGCACCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGGGGTTCCTCAGAAGCTGCAGCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AHSQLLGPGTAGVPQKLQLPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...CTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACAGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSSRWWGWKASGREVTTTGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...TGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: GAKESPPAAAARAGMASPGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...TGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: RASSTAITTWRSRSLFTAQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGACTGAGCCGCCGCTACTaGGCCGAAAAGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGLSRRY*AEKGRG
Trigger: CCCCCTCCCCTTTTCGGCCCAGTAGCGGCGGCTCAG...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000560155.5
ENST00000643406.1
CDS-3UTR CCA 90 bp CGAGGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTGGGTGTTCAGTCGTCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGVLQALAHNLQQWGQQSGCSVV*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGACGACTGAACACCC...AGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
CDS-3UTR GCA 90 bp TTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FRSRRSSRWWGWKASGREPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp GCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGGGGTTCCTCAGAAGCTGCAGCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: AHSQLLGPGTAGVPQKLQPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...CTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGAGGAATTCCCGCAGGTaGTCCATGATGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: AAAARAGMASPACSSNMARNSRR*SMMAGK
Trigger: CTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCT...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCCGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPRARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWSPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RASSTAITTWRSRSLFTALPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EEAPGGGVGRPRAGRSPPLPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...TGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMSHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: AAAARAGMASPACSSNMASLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGTCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RANSAALRTTCEGSSRPLSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: IQKPKKLPVVGLEGLGPGRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...TCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSAGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTSFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGGTCGCCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGTGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VVASSVRQHGQHQESSFAWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...CGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVSQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCSQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PKMALLRTSGSASWAVLNQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMSGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPCLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGGTCGCCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VVASSVRQHGQHQESSFATAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...CGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCGACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRLPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCCTGAGCCGCCGCTACTaGGCCGAAAAGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPLSRRY*AEKGRG
Trigger: CCCCCTCCCCTTTTCGGCCCAGTAGCGGCGGCTCAG...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000560155.5
ENST00000643406.1
3UTR CAA 72 bp TCTGTTTCTCTCTGCAGGGCCGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCCGCCGCCAGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SVSLCRAVRIRD*RLSRCSAASRR
Trigger: GCGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
3UTR CAA 72 bp CCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PCSASTPIPKMA*LRTSGSASWAV
Trigger: CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGACCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSAPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VAMAPRALTASSLARGLLEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...CAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTGGCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RWYGLSLRKASSNMGISWPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...CCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCGCAGGTGCTCCATGATGGCAGGGAAGTAGGGCAGCAGCGAGGCCTGGGCAGCCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: PQVLHDGREVGQQRGLGSQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...GCTGCCCAGGCCTCGCTGCTGCCCTACTTCCCTGCCATCATGGAGCACCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAGACCCGATAAGGCTGCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SDPIRLQIGCTCSAASQGSPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCTGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SRRSSRWWGWKASGREVTCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...GGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRASHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVSHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGAGCAGCCCAGGGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: EVGSHGGQSAQGVEEQPRVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...CCTGGGCTGCTCTTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: LAHNLQQWGQQSLPDVVAAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...GGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGAGGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGVLQALAHNLQQWGQQSGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...AGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGTCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLIQKPKKLPVVGLEGLGANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...CCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGATCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RHIFSAEVGSHGGQSAQGSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...TCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGAGCAGCCCAGGGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: EVGSHGGQSAQGVEEQPRGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...CCTGGGCTGCTCTTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRASSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VAMAPRALTASSLARGLLSFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...CAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCGTAAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GCQGRDGLSSVLQQHGVVSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...TACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGTGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKPAKNGAKESPPAAAARWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGATGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IQKPKKLPVVGLEGLGPGWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...TCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: SRRSSRWWGWKASGREVTGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...GGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp GAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGCTGAGCCGCCGCTACTaGGCCGAAAAGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ESHSEAEEAPGGGVGRPRLSRRY*AEKGRG
Trigger: CCCCCTCCCCTTTTCGGCCCAGTAGCGGCGGCTCAG...CCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559253.1
ENST00000642520.1
3UTR CAA 72 bp CCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSDSTASTRSPA*RWYGLSLRKAS
Trigger: AGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 72 bp CTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTaGTCACGGACACGATCATGTCGCTCCCGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LAINRRASAPQM*SRTRSCRSRAR
Trigger: CCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGGGGTTCCTCAGAAGCTGCAGTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: AHSQLLGPGTAGVPQKLQWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...CTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGCTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGLGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGCTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRLGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTCTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGLGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: AAAARAGMASPACSSNMACCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...CGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTCTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PTSPRVSFRSRRSSRWWGLHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...ACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGCTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PGEPTSPRVSFRSRRSSRLHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...CCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PGEPTSPRVSFRSRRSSRPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...CCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALRWYGLSLRKASSNMGIHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...GATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGACATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSNGSQGAHSQLLGPGTAQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...AGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCGTACAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GCQGRDGLSSVLQQHGVVQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...TACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGCGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQRARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: RHIFSAEVGSHGGQSAQGAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...TCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATGGCACGACTCGGGCTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LAFPLPVHCLHVGWHDSGFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...GCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGCTGGTATGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PAPSDSTASTRSPALRWYGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...ATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSNGSQGAHSQLLGPGTASLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...AGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACATCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSSRWWGWKASGREVTTTSLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...TGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp CCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGGCCCGGCTGACTCCATaGCAGCAACTGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PGEPTSPRVSFRSRRSSRARLTP*QQLSRR
Trigger: GCGGCGGCTCAGTTGCTGCCATGGAGTCAGCCGGGC...CCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGATCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GIRVCMAMISLGTNIRARSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...TCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSAGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCCACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGACAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCACAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVLPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPRPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGACGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGRPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSARPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGGTCGCCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: VVASSVRQHGQHQESSFAGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...CGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCGACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAGGGTGTTCAGTCGTCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAGCSVV*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGACGACTGAACACCC...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
CDS-3UTR TCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: RKPAKNGAKESPPAAAARAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SWWDWPSTGGQVPHRCCHRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...GTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCTAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGAGCTCCCGTAGGAGCTaGTCTAGCCCGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: AGSILSGLAAACSLGEAQSSRRS*SSPADS
Trigger: GGAGTCAGCCGGGCTAGAGCAGCTCCTACGGGAGCT...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp GCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: AAQESPPHQESHSEAEEAPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...AGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGAGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGTGCTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALCSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGCA...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
CDS-3UTR GCA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGAGGAATTCCCGCAGGTaGTCCATGATGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FRSRRSSRWWGWKASGRERNSRR*SMMAGK
Trigger: CTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCT...CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVRARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSAQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAATGCCTCCCCCAGCCGCGGCTaGCAGGGCAGGGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: LIVKQKEGAAPVILRHNASPSRG*QGRDGL
Trigger: GAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGA...GGCATTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCCTGAGGCTCACACAGTaGCTGCAAACAGGAGAGATT +
Preference number: 4 (lower is better)
Translates to: SRRSSRWWGWKASGREVTLRLTQ*LQTGEI
Trigger: AATCTCTCCTGTTTGCAGGCACTGTGTGAGCCTCAG...GGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCATTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: KPKKLPVVGLEGLGPGGHHSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAATG...GTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559253.1
ENST00000642520.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCTCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGTCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: EPTSPRVSFRSRRSSRWWSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...CCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACAGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVCMAMISLGTNIRARGTANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...TGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GIRVCMAMISLGTNIRARSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...TCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCATCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CMAMISLGTNIRARGTSSSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AGSILSGLAAACSLGEAQRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGATCTGTTCCAAGTGGGGCGCCAGGCCCTCACCCATCAGACCCGATAAGGCTTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VICSKWGARPSPIRPDKASSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...AGCCTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSANMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVNMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCACCACACTTAGCAGCAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RWWGWKASGREVTTTLSSKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...GCTGCTAAGTGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSASFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGCTGGTATAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PAPSDSTASTRSPALRWYSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...ATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPSLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: RKPAKNGAKESPPAAAARSLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGSLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGACACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: IQKPKKLPVVGLEGLGPGHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...TCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSSQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGSILSGLAAACSLGEAQRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLCLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGLPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: RKPAKNGAKESPPAAAARGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGAGGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: RGVLQALAHNLQQWGQQSGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...AGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
3UTR CAA 72 bp GAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCACAGGGAGCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: EDGIASHLGVCL*GGAQQHREQPR
Trigger: TCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCGGCACCTCTGACTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PAPLTPTVHPKPQGPHRPAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...AGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTGCTCCATGATGGCAGGGGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RSSRPVNRNSRRCSMMAGAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...CCCTGCCATCATGGAGCACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp CCGGCACCTCTGACTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: PAPLTPTVHPKPQGPHRPPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...AGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVLGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGCTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVLGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAACTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVELHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCACTCCATGGCAGCAACTaGGCCGCCGCTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: CMAMISLGTNIRARGTSSLHGSN*AAATGP
Trigger: CGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAG...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCACCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NVRSSNSAALVSGGILLSPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTGCTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSACSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGCA...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
CDS-3UTR GCA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: RASSTAITTWRSRSLFTATCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LAHNLQQWGQQSLPDVVAPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...GGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGACATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLARARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCTGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRACQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSLPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: GSAQAEGPHGLLTGIPAGVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...ACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: PKMALLRTSGSASWAVLNQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGCCCGGCTGACTCCATaGCAGCAACTGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVEARLTP*QQLSRR
Trigger: GCGGCGGCTCAGTTGCTGCCATGGAGTCAGCCGGGC...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTGCTGTCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: AMISLGTNIRARGTSSVLSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...CAGCACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: LQIRRSSGATSITWSGLLSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...GAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTAGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGCAAACTGGCGGATCTaGGGGTCGGCCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SRRAAQESPPHQESHSEAANWRI*GSAAEA
Trigger: AGCCTCGGCGGCCGACCCCCAGATCCGCCAGTTTGC...GGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LIQKPKKLPVVGLEGLGPPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...CGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGACCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGATCTGTTCCAAGTGGGGCGCCAGGCCCTCACCCATCAGACCCGATAAGGCTTCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: VICSKWGARPSPIRPDKASLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...AGCCTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGTCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: EEQPRRAHLTKSLIQKPKRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...CTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCACGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCARRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDSSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQNMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQSLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGCACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLARPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWSGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGATCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGSGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: VRVPQLRSTPVRASSTAIDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLACLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLATAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGRPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATGGCACGACTCGGGCTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LAFPLPVHCLHVGWHDSGWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...GCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGATGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGCGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTAGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCCTGAGCCGCCGCTACTaGGCCGAAAAGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SRRAAQESPPHQESHSEALSRRY*AEKGRG
Trigger: CCCCCTCCCCTTTTCGGCCCAGTAGCGGCGGCTCAG...GGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559253.1
ENST00000642520.1
CDS-3UTR CCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGCGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRRAPAT*RRIQPV
Trigger: CACAGGCTGAATACGACGCCATGTTGCTGGAGCACG...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
3UTR CAA 72 bp GCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALRTTCEGSSRP*HTICSSGGSSL
Trigger: GAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 72 bp CTGGCCCAGGGCAAACAGCGCAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCCCTTGCACACAATCTG +
Preference number: 4 (lower is better)
Translates to: LAQGKQRSIAYN*RGVLQALAHNL
Trigger: CAGATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: IRVCMAMISLGTNIRARGAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGTGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDLGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTAGGTGGTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGGVCVQEAPTSSRRGAVRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...CACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACACCACCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: EPTSPRVSFRSRRSSRWWRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...CCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVTAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVTAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CGAGGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGVLQALAHNLQQWGQQSRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...AGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHALPARPSRRWHCFAPRRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCCGTGGCCCGACGGATaGGCTCGGTGTCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNPWPDG*ARCPVA
Trigger: TGCTACCGGACACCGAGCGCATCCGTCGGGCCACGG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: IRVCMAMISLGTNIRARGGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTTGCTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSCSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGCA...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
CDS-3UTR GCA 90 bp GTGGTCGCCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VVASSVRQHGQHQESSFASREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...CGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATGGCACGACTCGGGCCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LAFPLPVHCLHVGWHDSGQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...GCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRAQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGAGCAGCCCAGGCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: EVGSHGGQSAQGVEEQPRHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...CCTGGGCTGCTCTTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SFALVWALAPQSLFQHGHRARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGTGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMCKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ALRWYGLSLRKASSNMGILPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...GATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: EEQPRRAHLTKSLIQKPKSHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...CTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLIQKPKKLPVVGLEGLGSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...CCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GIRVCMAMISLGTNIRARGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...TCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PGEPTSPRVSFRSRRSSRARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...CCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGTCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: EPTSPRVSFRSRRSSRWWSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...CCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTTCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTACCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACACGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVCMAMISLGTNIRARGTRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...TGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AAQESPPHQESHSEAEEARRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...AGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCGAGAGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SERHIFSAEVGSHGGQSAGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...CGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCTCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: WAGWPPCSASTPIPKMALPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: RKPAKNGAKESPPAAAARVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PIPKMALLRTSGSASWAVVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTGGAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: RWYGLSLRKASSNMGISWSLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...CCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGAHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRARFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RANSAALRTTCEGSSRPLGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCTCTGGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCTGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSGSAQAEGPHGLLTGIPWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...GGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTAGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVEGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKCLGVSPIQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCAGCCAGCGGCCTCATaGGCTCCCCCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNQPAAS*APPLLV
Trigger: CACGAGCAGTGGGGGAGCCCATGAGGCCGCTGGCTG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSAQAEGPHGLLTGIPAGRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...ACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCTCTGGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSGSAQAEGPHGLLTGIPRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...GGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVASGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: GSAQAEGPHGLLTGIPAGSGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...ACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQCLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTATGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVCLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAATAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAACTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVELPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCASRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGATCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLARPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCTCTGGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: GSGSAQAEGPHGLLTGIPLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...GGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTAGGTGGTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: LGGVCVQEAPTSSRRGAVLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...CACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACACCACCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCAGCCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GQPAKQQCWVPRGSFDRPWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...AGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCTGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPCGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCTGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPCGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCAGCCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: GQPAKQQCWVPRGSFDRPATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...AGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCCGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACRAPAT*RRIQPV
Trigger: CACAGGCTGAATACGACGCCATGTTGCTGGAGCACG...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGGTGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: ALLRTSGSASWAVLNSTGWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...CCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: HGHDQLGHQHPSERHIFSPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...ACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCCTCGGTGGAACGCAGTaGCAGCAGCATGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: IRVCMAMISLGTNIRARGLGGTQ*QQHERG
Trigger: ACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAG...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RANSAALRTTCEGSSRPLPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGATGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGCCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLATAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PKMALLRTSGSASWAVLNRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTAGCTCCCGTAGGAGCTaGTCTAGCCCGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: HGHDQLGHQHPSERHIFSSSRRS*SSPADS
Trigger: GGAGTCAGCCGGGCTAGAGCAGCTCCTACGGGAGCT...ACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTAGCTCCCGTAGGAGCTaGTCTAGCCCGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVSSRRS*SSPADS
Trigger: GGAGTCAGCCGGGCTAGAGCAGCTCCTACGGGAGCT...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVEGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: CMAMISLGTNIRARGTSSGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RKPAKNGAKESPPAAAARMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATGGCACGACTCGGGCAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LAFPLPVHCLHVGWHDSGSREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...GCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRASREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: SASTPIPKMALLRTSGSATCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCTCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTAGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGACCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PGEPTSPRVSFRSRRSSRPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...CCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGAGGAATTCCCGCAGGTaGTCCATGATGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGRNSRR*SMMAGK
Trigger: CTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCT...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCAGGAATTCCCGCAGGTaGTCCATGATGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAARNSRR*SMMAGK
Trigger: CTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCT...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGAGGAATTCCCGCAGGTaGTCCATGATGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: AGSILSGLAAACSLGEAQRNSRR*SMMAGK
Trigger: CTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCT...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCCATGGGCTCCCCCACTaGTCGTGCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATHGLPH*SCQHPQ
Trigger: CTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATG...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCACGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: CMAMISLGTNIRARGTSSRARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGACCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: RHIFSAEVGSHGGQSAQGPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...TCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCACAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGATGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: APQMLSRTRSCRSRARRGCKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTGGTGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RWYGLSLRKASSNMGISWCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...CCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHLPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQLPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RRAAQESPPHQESHSEAEGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...TTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGSLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGCTGGTATGATTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: PAPSDSTASTRSPALRWYDSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAATC...ATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGATTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQDSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAATC...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGCCCGGCTGACTCCATaGCAGCAACTGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWARLTP*QQLSRR
Trigger: GCGGCGGCTCAGTTGCTGCCATGGAGTCAGCCGGGC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: IRVCMAMISLGTNIRARGARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAGACCCGATAAGGCTGCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTTCTCTCTCTGGGCTGTaGGGGCTGTGGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: SDPIRLQIGCTCSAASQGSLSGL*GLWVLC
Trigger: GCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGA...ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTCCCGGTGGTGGGGTTaGAAGGCCTCGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSRWWG*KASGRE
Trigger: CTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCACGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NVRSSNSAALVSGGILLSRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAGACCCGATAAGGCTGCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SDPIRLQIGCTCSAASQGGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGACCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: IQKPKKLPVVGLEGLGPGPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...TCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp CCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: PTSPRVSFRSRRSSRWWGIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...ACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLANMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSNMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCCACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTATGGCCCGGGGACTGCTaGGGTTCCTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVWPGDC*GSSEAA
Trigger: TGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCA...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VCVSKRHRLQVGEEQWHYRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...GTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGAGTAGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVEEQPRRAHLTKSLIQKCLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...CTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: CMAMISLGTNIRARGTSSTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGTGCAGCAAGGGTGGCAGGAGACGATTCTTCAGTAAGGCCTTGCTCTTGACTCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VCSKGGRRRFFSKALLLTLPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...AGTCAAGAGCAAGGCCTTACTGAAGAATCGTCTCCTGCCACCCTTGCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTGCCAGGGCAGGGATaGCCTCTCCAGCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNLPGQG*PLQRAP
Trigger: TGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTGCTGTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: AMISLGTNIRARGTSSVLSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...CAGCACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: DQSLHGHDQLGHQHPSERRPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...CCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ARNVRSSNSAALVSGGILWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGAGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCTGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LAHNLQQWGQQSLPDVVACGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...GGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SWWDWPSTGGQVPHRCCHATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...GTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RANSAALRTTCEGSSRPLCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: SWWDWPSTGGQVPHRCCHGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...GTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGAGATCCCGAGAGAAGTaGGTAGGTACTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVFSRLRVSTAANWRIWGRSREK*VGTYSV
Trigger: AACAGAGTAAGTACCTACCCACTTCTCTCGGGATCT...CCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GCGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGCTTCTGACTTGGGTTTaGCAGATCATCATCACCCTT +
Preference number: 4 (lower is better)
Translates to: AGVQSSAGQHGRKLADLGLLTWV*QIIITL
Trigger: AAGGGTGATGATGATCTGCCAAACCCAAGTCAGAAG...CCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCAACAGTGCGGCCTTaGTGTCCTCACCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQATVRP*CPHLVG
Trigger: TCCCACCAGGTGAGGACACCAAGGCCGCACTGTTGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS-3UTR CCA 90 bp TACTCTGTTTCTCTCTGCAGGGCCGTCAGGATCAGGGACTTGAGGCTCTCCCGTGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YSVSLCRAVRIRDLRLSRARRTI*SCSVAW
Trigger: CCAGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...ACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR TCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCCTGTGGGTACTGTGCTaGAGCAGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAALWVLC*SSCKSC
Trigger: ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAG...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCCTGTGGGTACTGTGCTaGAGCAGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LAHNLQQWGQQSLPDVVALWVLC*SSCKSC
Trigger: ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAG...GGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: EEQPRRAHLTKSLIQKPKAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...CTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SSPGEPTSPRVSFRSRRSAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...GCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: QQAVSPELLESCRCAVWPAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCGGCACCTCTGACTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PAPLTPTVHPKPQGPHRPPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...AGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKCLGVSPIPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TCAGACCCGATAAGGCTGCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SDPIRLQIGCTCSAASQGWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCATGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QQAVSPELLESCRCAVWPWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSCCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGAGCCCAGAGCTGCTTaGAAGCTGTCGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QQAVSPELLESCRCAVWPEPRAA*KLSVCC
Trigger: ACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTC...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGGGCAAACAGCGCAGCATTGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTGCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RANSAALRTTCEGSSRPLLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: AGSILSGLAAACSLGEAQLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVTAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAATAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGCTCCCGTAGGAGCTaGTCTAGCCCGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSSRRS*SSPADS
Trigger: GGAGTCAGCCGGGCTAGAGCAGCTCCTACGGGAGCT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGAGCAGCCCAGGACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: EVGSHGGQSAQGVEEQPRTCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...CCTGGGCTGCTCTTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCACCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: NVRSSNSAALVSGGILLSPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTCCAGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPALRWYGLSLRKASSNMGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGGAATTCCCGCAGGTaGTCCATGATGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLARNSRR*SMMAGK
Trigger: CTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CCGGCACCTCTGACTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PAPLTPTVHPKPQGPHRPQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...AGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAATEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QPRRAHLTKSLIQKPKKLQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...GAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTGGACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: RWYGLSLRKASSNMGISWTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...CCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: LQIRRSSGATSITWSGLLQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...GAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVEMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQTSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTTGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CSASTPIPKMALLRTSGSCKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTCGCACCTCGGGGTCTaGCTCTTGGGCGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSHLGV*LLGGAQ
Trigger: TTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGTGGCCCCCATGCTCTaGCAGCACGCCCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWVAPML*QHAHPE
Trigger: TTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCAC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: HVHNLYSEMLGSLPHQLNAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...ATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGCAGGGTGGCCCCCATaGTCTGCCAGCACGCCCATC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELAGWPP*SASTPI
Trigger: GATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTCTGGAGCTGTTCCGTaGCCCGACGGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWSGAVP*PDGCAR
Trigger: CCGAGCGCATCCGTCGGGCCACGGAACAGCTCCAGA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGCCCGAAGAACGATCTaGAGCTGTTCCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RRAAQESPPHQESHSEAEARRTI*SCSVAR
Trigger: TCGGGCCACGGAACAGCTCCAGATCGTTCTTCGGGC...TTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCAGCCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTCTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GQPAKQQCWVPRGSFDRPLPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...AGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAAAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCGAAGAAGCTCCCGGTaGTGGGGTTGGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNRRSSR*WGWKAS
Trigger: CGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GGAGTAGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GVEEQPRRAHLTKSLIQKGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...CTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGGGATCCAACTGGCCTaGTGGGGGCTCAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWGIQLA*WGLSSH
Trigger: GTGGCTGCTGAGCCCCCACCAGGCCAGTTGGATCCC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCTCCTCGGGATCCAACTaGCCTGGTGGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKCLGVSPISSGSN*PGGGSA
Trigger: TGCTGAGCCCCCACCAGGCCAGTTGGATCCCGAGGA...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQNMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: SWWDWPSTGGQVPHRCCHKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...GTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: IRVCMAMISLGTNIRARGSFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HGHDQLGHQHPSERHIFSSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...ACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LQIRRSSGATSITWSGLLSLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...GAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCACACAATCTGCAGCAGTaGGGGCAGCAGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QQAVSPELLESCRCAVWPHNLQQ*GQQSLP
Trigger: AGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTG...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: ESHSEAEEAPGGGVGRPRRFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...CCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRSGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LAHNLQQWGQQSLPDVVAEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...GGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNCLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRCLHVG*HDSGQG
Trigger: GCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCA...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATACGGCCATCACCACCTaGCGTTCCCGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNTAITT*RSRSLF
Trigger: GAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVRAPAT*RRIQPD
Trigger: ATCAGGCTGAATACGACGCCATGTTGCTGGAGCACG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
CDS-3UTR CCA 90 bp GTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VCVSKRHRLQVGEEQWHYSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...GTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAATCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: RAAQESPPHQESHSEAEESGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...TTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGCGCCCATCCCGAAGATaGCATTGCTTCGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQRPSRR*HCFAPR
Trigger: CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCG...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGGAGCCCCAGCAGCTTaGGGAAGTGTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRGAPAA*GSVPGQ
Trigger: CTGCCCAGGAACACTTCCCCAAGCTGCTGGGGCTCC...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTCCAGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: SPALRWYGLSLRKASSNMVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: IRVCMAMISLGTNIRARGALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AACATGGCGTCGTATTCAGCCTGTGGAGCCAGGTCAGGGGCTGATCATCATCTTCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: NMASYSACGARSGADHHLQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...AAGATGATGATCAGCCCCTGACCTGGCTCCACAGGCTGAATACGACGCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCAGCACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNQHLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTGCTG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: AGSILSGLAAACSLGEAQATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLACGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLACRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLARLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGGTGTCCTCACCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAGVLTW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGGTGAGGACACC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTATAACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAYNLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTTATA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558233.1
ENST00000645873.1
3UTR CAA 72 bp TTTTCTGAGAACTGGCCCAGGGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGGTCCTCCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FSENWPRANSAA*RTTCEGSSRPL
Trigger: CAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CMAMISLGTNIRARGTSSAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLADDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGCAGCAGTCTCTGCCTaGTGTGGTCGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWAAVSA*CGRQLR
Trigger: ACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCCCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCCGCAGGTGCTCCATaGTGGCAGGGAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPAGAP*WQGSRA
Trigger: TGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCGGCACCTCTGACTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PAPLTPTVHPKPQGPHRPFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...AGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGCGTCGTATTCAGCCTaGTCATCATCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVASYSA*SSSSSS
Trigger: GGAAGAGGAAGATGATGATCAGGCTGAATACGACGC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
CDS-3UTR TCA 90 bp CGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTGGGCGTCGTATTCAGCCTaGTCATCATCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RWYGLSLRKASSNMGISWASYSA*SSSSSS
Trigger: GGAAGAGGAAGATGATGATCAGGCTGAATACGACGC...CCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGACACAAACTGGGCTaGGGCAGCACCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWRHKLG*GSTQAL
Trigger: CAGGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTGTGCAGCAAGGGTGGCAGGAGACGATTCTTCAGTAAGGCCTTGCTCTTGACTAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VCSKGGRRRFFSKALLLTRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...AGTCAAGAGCAAGGCCTTACTGAAGAATCGTCTCCTGCCACCCTTGCTGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCGGCACCTCTGACTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PAPLTPTVHPKPQGPHRPLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...AGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RRAAQESPPHQESHSEAETAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...TTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHTAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGAGTAGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GVEEQPRRAHLTKSLIQKTAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...CTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLARTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCACCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QQAVSPELLESCRCAVWPPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSPGEPTSPRVSFRSRRSPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...GCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KSLIQKPKKLPVVGLEGLPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...GAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCTGGATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RWYGLSLRKASSNMGISWMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...CCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ESHSEAEEAPGGGVGRPRMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...CCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SSPGEPTSPRVSFRSRRSGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...GCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp GATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DQSLHGHDQLGHQHPSERMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...CCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAGACCCGATAAGGCTGCAAATAGGCTGTACGTGCAGCGCCGCAAGTCAGGGTATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SDPIRLQIGCTCSAASQGMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCATGGGGAAAAGGGTGTaGAGCAAGGGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LQIRRSSGATSITWSGLLMGKRV*SKGGRR
Trigger: TCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCAT...GAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVTCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CCLARNVRSSNSAALVSGQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGGAATTCCCGCAGGTaGTCCATGATGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARNSRR*SMMAGK
Trigger: CTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTCCAGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SPALRWYGLSLRKASSNMQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTCCAGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPALRWYGLSLRKASSNMHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLATEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QAVSPELLESCRCAVWPGTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: RHIFSAEVGSHGGQSAQGTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...TCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLATGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RASAPQMLSRTRSCRSRASPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCAGGCCCAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NSTGSSRDTNWAEAAPRPSPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGSPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SLIQKPKKLPVVGLEGLGTSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...CCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp TCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SWWDWPSTGGQVPHRCCHTSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...GTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: KLSVCCLARNVRSSNSAACKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVCKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCATGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QQAVSPELLESCRCAVWPCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGTGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EEQPRRAHLTKSLIQKPKCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...CTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCGAGAGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SERHIFSAEVGSHGGQSAALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...CGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HGHDQLGHQHPSERHIFSSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...ACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTACAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHSLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCTCACTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTTACTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: PHSTLRLELKSLPHKSQPYSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTA...AGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR GCA 90 bp GAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGCTGAGGCTCACACAGTaGCTGCAAACAGGAGAGATT +
Preference number: 4 (lower is better)
Translates to: ESHSEAEEAPGGGVGRPRLRLTQ*LQTGEI
Trigger: AATCTCTCCTGTTTGCAGGCACTGTGTGAGCCTCAG...CCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGCTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVLPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVLPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGATCTGTTCCAAGTGGGGCGCCAGGCCCTCACCCATCAGACCCGATAAGGCTCTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VICSKWGARPSPIRPDKALPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...AGCCTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCCCATCTCTCTCTCTaGGCTGTGGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPHLSL*AVGAVG
Trigger: ACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGAAGCTCCCGGTGGTaGGGTTGGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELRSSRW*GWKASG
Trigger: GCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GCTGCAAAAGCTGTGGCCAGGCCTCCAAGCCTTCCTTTCGAAAAATGGTGGCTGATCCAACTGGCCTGGTaGGGGCTCAGCAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: AAKAVARPPSLPFEKWWLIQLAW*GLSSHN
Trigger: ATTGTGGCTGCTGAGCCCCCACCAGGCCAGTTGGAT...CAGCCACCATTTTTCGAAAGGAAGGCTTGGAGGCCTGGCCACAGCTTTTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCAVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTAAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVNMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAAACATGGGCATCAGCTaGGGACAGAGCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVENMGIS*GQSFSG
Trigger: CCCCGAGAAGCTCTGTCCCCAGCTGATGCCCATGTT...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTAAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVSFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGTCCAGCTTTGCGCTaGTATGGGCTCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSPALR*YGLSLR
Trigger: GCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAACAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVEQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCACAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CMAMISLGTNIRARGTSSQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCACAGCCAGCTCCTTaGCCCGGGGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TTCTAKCLGVSPISSISNSQPAP*PGDCWG
Trigger: ACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGA...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGGCCCAGACCCAGCTaGCAGCATTCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWRPRPS*QHSSAS
Trigger: GCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAGCGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: RQEQQQCGLGVWWDLVVSEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...GCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLARAPAT*RRIQPD
Trigger: ATCAGGCTGAATACGACGCCATGTTGCTGGAGCACG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SFALVWALAPQSLFQHGHETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTTCCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTTGGGGAAGTGTTCCTaGGCAGGGTGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: SSPSLSSSNRRKELLPSYLGKCS*AGWPPC
Trigger: GCATGGGGGCCACCCTGCCCAGGAACACTTCCCCAA...GTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACCTCCCTTGAATAGCTGCGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: APTSSRRGAVALPPLNSCALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...GCAGCTATTCAAGGGAGGTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSPGEPTSPRVSFRSRRSWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...GCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGTGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EQPRRAHLTKSLIQKPKKCGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...CTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVARLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGTCGGCCTTATTCTTCTGACTTaGGTTTGGCAGATCATCATC +
Preference number: 4 (lower is better)
Translates to: VQSSAGQHGRKLADLGVGLILLT*VWQIII
Trigger: GATGATGATCTGCCAAACCCAAGTCAGAAGAATAAG...GCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGCAACAGTGCGGCCTTaGTGTCCTCACCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNATVRP*CPHLVG
Trigger: TCCCACCAGGTGAGGACACCAAGGCCGCACTGTTGC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATATAACCTGGGGCTCTaGTTTCCTGGTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAYNLGL*FPGGTG
Trigger: GCCAGTCCCACCAGGAAACCAGAGCCCCAGGTTATA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558233.1
ENST00000645873.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCCACATCTATAACCTaGGGCTCTGGTTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAATSIT*GSGFLV
Trigger: CACCAGGAAACCAGAGCCCCAGGTTATAGATGTGGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558233.1
ENST00000645873.1
3UTR CAA 72 bp CTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGCACAGCAAAACTGACC +
Preference number: 4 (lower is better)
Translates to: LQSSSVGFRGAA*TGLVQCTAKLT
Trigger: GGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTAGGTGGTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGCTGTGGGTACTGTGCTaGAGCAGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGGVCVQEAPTSSRRGAVLWVLC*SSCKSC
Trigger: ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAG...CACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACACCACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCTGTGGGTACTGTGCTaGAGCAGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQLWVLC*SSCKSC
Trigger: ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCGCACATCTTCAGTGCTaGGGTAGGGAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKCLGVSPIAHLQC*GREPWW
Trigger: CCACCATGGCTCCCTACCTCAGCACTGAAGATGTGC...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTCCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGCCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: CLARNVRSSNSAALVSGGPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTCCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTACCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTATTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCGTCGTATTCAGCCTaGTCATCATCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAASYSA*SSSSSS
Trigger: GGAAGAGGAAGATGATGATCAGGCTGAATACGACGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
CDS-3UTR TCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLACCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACACTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RVCMAMISLGTNIRARGTLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...TGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATACAGCCTGGAGCTCCTaGGCCTTGTCAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNTAWSS*ALSTGS
Trigger: ACTGCCTGTTGACAAGGCTCAGGAGCTCCAGGCTGT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDTCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SFALVWALAPQSLFQHGHQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCACAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QQAVSPELLESCRCAVWPQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: PGEPTSPRVSFRSRRSSRGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...CCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCCTTGGCCCGGGGACTaGTGGGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELPWPGD*WGSSEA
Trigger: AGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: HGHDQLGHQHPSERHIFSHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...ACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTAGGTGGTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGGVCVQEAPTSSRRGAVTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...CACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACACCACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAATEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNQSLMG*LPHIQV
Trigger: CACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAATGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTCCAGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: SPALRWYGLSLRKASSNMTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: SFALVWALAPQSLFQHGHTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCGGGCCAGGGCAGCCTaGAAAGCAGCAGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELRARAA*KAAVLG
Trigger: ACCCAACACTGCTGCTTTGCAGGCTGCCCTGGCCCG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGATGGCCTCTCCAGCGTaGTCCAGCAACATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWMASPA*SSNMAS
Trigger: CGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCAT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLATSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLACKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGGACTGGCTGCAGCCTaGAGTCTAGGAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELGLAAA*SLGEAQ
Trigger: CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCATTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: AAQESPPHQESHSEAEEAHSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAATG...AGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559253.1
ENST00000642520.1
CDS-3UTR CCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCGGTAGGGAGCCATGGTaGTCAGAGTGCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATGREPW*SECAGS
Trigger: ACTCCCTGCGCACTCTGACCACCATGGCTCCCTACC...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CCGGCACCTCTGACTCCAACAGTTCATCCAAAGCCTCAAGGGCCTCACAGGCCTCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: PAPLTPTVHPKPQGPHRPPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...AGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGTCAGAGGTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: EEQPRRAHLTKSLIQKPKVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...CTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVARFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHRFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAACAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TYAYRIAQGHISSYLQAEQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...TTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGCAGCCCTGTTTTGTCTTGCACACCAATAATGGCAGGAAACCGGCAAAGAATGGCAGCAGCGAGGCCTaGGCAGCCGTAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: VQPCFVLHTNNGRKPAKNGSSEA*AAVAMA
Trigger: AGCCATTGCTACGGCTGCCCAGGCCTCGCTGCTGCC...ATTCTTTGCCGGTTTCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTCAGGGTCGTCTACCTaGTCGCAGAGGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSGSST*SQRPRP
Trigger: GGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACGTGATCTGTTCCAAGTaGGGCGCCAGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: TTCTAKCLGVSPISSISNVICSK*GARPSP
Trigger: GGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: GSAQAEGPHGLLTGIPAGEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...ACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RAAQESPPHQESHSEAEEAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...TTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRAPAT*RRIQPD
Trigger: ATCAGGCTGAATACGACGCCATGTTGCTGGAGCACG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAARAPAT*RRIQPD
Trigger: ATCAGGCTGAATACGACGCCATGTTGCTGGAGCACG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
CDS-3UTR CCA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVEETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGCCGAGACACAAACTaGGCTGAGGCAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWSRDTN*AEAAPR
Trigger: CCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGCTCTGGTTTCCTGGTaGGACTGGCCATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNALVSW*DWPSTG
Trigger: GCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAATGTGAGGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AYRIAQGHISSYLQAECEGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...CTCACATTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAATGTGAGAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AYRIAQGHISSYLQAECERLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...CTCACATTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAACGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RAAQESPPHQESHSEAEERAPAT*RRIQPV
Trigger: CACAGGCTGAATACGACGCCATGTTGCTGGAGCACG...TTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CCA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCACGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NVRSSNSAALVSGGILLSRAPAT*RRIQPV
Trigger: CACAGGCTGAATACGACGCCATGTTGCTGGAGCACG...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000560155.5
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCACATCTATAACCTaGGGCTCTGGTTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAATSIT*GSGFLV
Trigger: CACCAGGAAACCAGAGCCCCAGGTTATAGATGTGGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558233.1
ENST00000645873.1
CDS-3UTR TCA 90 bp CTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAATGCCCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LIVKQKEGAAPVILRHNAPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...GGCATTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCGCGTCGTATTCAGCCTaGTCATCATCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IRVCMAMISLGTNIRARGASYSA*SSSSSS
Trigger: GGAAGAGGAAGATGATGATCAGGCTGAATACGACGC...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGCGTCGTATTCAGCCTaGTCATCATCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQASYSA*SSSSSS
Trigger: GGAAGAGGAAGATGATGATCAGGCTGAATACGACGC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCGTCGTATTCAGCCTaGTCATCATCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAASYSA*SSSSSS
Trigger: GGAAGAGGAAGATGATGATCAGGCTGAATACGACGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
CDS-3UTR TCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGAGGCGCCCAATGGTaGCCCACTCCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELRGAQW*PTPPSP
Trigger: AGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQCCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTAGGTGGTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGGVCVQEAPTSSRRGAVCCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...CACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACACCACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTGCTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNCSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGCA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000642155.1
ENST00000644546.2
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SSPGEPTSPRVSFRSRRSMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...GCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WPSTGGQVPHRCCHGHDHMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...ATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQTCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACCCAGGAGTCCAGCTTTaGGCTGGTATGGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: TTCTAKCLGVSPISSISNPGVQL*AGMGSR
Trigger: GCGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGG...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTGCAGCCCTGTTTTGTCTTGCACACCAATAATGGCAGGAAACCGGCAAAGAATGGGGGCAGCAGTCTCTaGCTGATGTGGTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VQPCFVLHTNNGRKPAKNGGSSL*LMWSPA
Trigger: AGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCC...ATTCTTTGCCGGTTTCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAAGGTCCTCCAGGCCCTTaGACACAATCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQGPPGP*TQSAAV
Trigger: CACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACC...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGCATTGCGTACAACTTaGGAGGGGTCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELALRTT*EGSSRP
Trigger: GGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: LQIRRSSGATSITWSGLLGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...GAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVATSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAATSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQTSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: EEQPRRAHLTKSLIQKPKTSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...CTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCTGCCTCTTGGGCGGTaGTCAACAGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELLPLGR*STAQGA
Trigger: TGCTCCCTGTGCTGTTGAGCACCGCCCAAGAGGCAG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTCCCGAAGATGGCATTaGTTCGCACCTCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWSRRWH*FAPRGL
Trigger: CAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTTCAGTGGCAGGGCATaGAGTAGGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELFSGRA*SRAAST
Trigger: GGTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGTCTCTGCCTGATGTaGTCGCCAGCTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWSLCLM*SPAPSD
Trigger: GTCTGACGGAGCTGGCGACCACATCAGGCAGAGACT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAAGGTTTTCTGAGAACTaGCCCAGGGCAAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: NVRSSNSAALVSGGILLSRFSEN*PRANSA
Trigger: TGCGCTGTTTGCCCTGGGCCAGTTCTCAGAAAACCT...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCGTGCTCCAGCAACATGGCGTCGTATTCAGCCTGATCATCATCTTCCTCTTGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: QRAPATWRRIQPDHHLPLGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...AAGAGGAAGATGATGATCAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
CDS-3UTR CCA 90 bp GCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAATGTGAGGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: AYRIAQGHISSYLQAECEEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...CTCACATTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLADTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTCGGGGTCTGCCTCTTaGGCGGTGCTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSGSAS*AVLNST
Trigger: TGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTGGTCAGGGCTGCTCTaGTACAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNWSGLL*YRKLKR
Trigger: CCTCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGTGTGTGTCCAAGAGGCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VCVSKRHRLQVGEEQWHYATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...GTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGCCTCTTGGACACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKCLGVSPICRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKCLGVSPIDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCTCCAGGCAGAATGTaGGGACTTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPPGRM*GLQRGR
Trigger: CCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTGGATCTGCACAGGCTaGAGGTCCTCACGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELWICTG*RSSRPV
Trigger: AACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCACATCCTCATCCATaGGCTCCTCCTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPHPHP*APPLLP
Trigger: GGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSCCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHCCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCQQAVSPELLESCRCAVSREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCCCTTGCACACAATCTaGAGCAGTGGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELPLHTI*SSGGSS
Trigger: ACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTAGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: SRRAAQESPPHQESHSEAGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...GGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCAAATAGGCTGTACGTaGAGCGCCGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWQIGCT*SAASQG
Trigger: ACCCTGACTTGCGGCGCTGCACGTACAGCCTATTTG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCATACTGAGGCACAATaGCCTCGGTGGAACGCAGTG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWHTEAQ*PRWNAV
Trigger: CACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELPLPVH*LHVGWH
Trigger: GTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCAGGCTGTCTTCCTCTaGAGCACAGCCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELQAVFL*STALST
Trigger: CGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKCLGVSPIALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCTTCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: LVQRNAWESPPSAQSPTLQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...AAGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCAACAGGCGGGCAAGTaGCCCACAGATGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELQQAGK*PTDVVT
Trigger: CGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATSLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAACTTTAGTCTTCAAAAGCACGGCCGCAAACTaGCGGATCTGGGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: DLGLADHHHPSSRTLVFKSTAAN*RIWGSA
Trigger: GGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCT...TTTGAAGACTAAAGTTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNVQRNA*ESPPSA
Trigger: AGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTAC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGCTTTGCGCTGGTATaGGCTCTCGCTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSFALV*ALAPQS
Trigger: GCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCAGGCCTTGGCTAGGTaGTGTGTGTGTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELQALAR*CVCPRG
Trigger: GCCTCTTGGACACACACACCACCTAGCCAAGGCCTG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGGTAGGGCTGCACCTTaGGCCCTAGGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELGRAAP*ALGSPQ
Trigger: TTGTGGAGAACCTAGGGCCCAAGGTGCAGCCCTACC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGCAAAGCAGCAGTGTTaGGTTCCGAGGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWAKQQC*VPRGSF
Trigger: AAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAACGTGCTCCAGCAACATaGCGTCGTATTCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: TYAYRIAQGHISSYLQAERAPAT*RRIQPD
Trigger: ATCAGGCTGAATACGACGCCATGTTGCTGGAGCACG...TTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558046.5
ENST00000642155.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACGTTTCCTGGTGGGACTaGCCATCAACAGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: TTCTAKCLGVSPISSISNVSWWD*PSTGGQ
Trigger: TTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAAC...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGGGGCTCTGGTTTCCTaGTGGGACTGGCCATCAACA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELGALVS*WDWPST
Trigger: TGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGGCCTTGGTGTCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWGLGVW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGACACCAAGGCC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TCTTCCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SSPSLSSSNRRKELLPSYATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...GTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCGCAACAGTGCGGCCTTaGTGTCTGGTGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATATVRP*CLVGSC
Trigger: ACAAGATCCCACCAGACACCAAGGCCGCACTGTTGC...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGGCTCTATTCTCTCTaGACTGGCTGCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWRLYSL*TGCSLQ
Trigger: CTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CAGCAGAGAATACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCGGCAGCAAGTGGGGCTaGCTCCAAATGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: QQRIRMRIALPRATFLATGSKWG*LQMGMS
Trigger: ACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCC...GGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 72 bp AAAGTGAGGCAGCAGAGAATACGTATGCGTATCGCATaGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KVRQQRIRMRIA*PRATFLATSRQ
Trigger: CTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTGCCTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCTGTGGGTACTGTGCTaGAGCAGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWLWVLC*SSCKSC
Trigger: ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGATGACCGGCACCTCTaGCTCCAACAGTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWDDRHL*LQQFIQ
Trigger: TTGGATGAACTGTTGGAGTCAGAGGTGCCGGTCATC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp GATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTGGTACCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: DTQKLGSHIYNLVRAALVPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...TACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TCTTCCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTTCCGCACATTCAGGTaGGGGCACTCCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SSPSLSSSNRRKELLPSYFRTFR*GHSSSL
Trigger: TAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAA...GTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNCCQPE*GCRYAE
Trigger: TTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCCATGGTGGTCAGAGTaGGCAGGGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELPWWSE*AGSRRA
Trigger: TGCTCTTCTACTCCCTGCGCACTCTGACCACCATGG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGGCCTCACAGGCCTTTaGCTCATCTATGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELGLTGL*LIYGDQ
Trigger: CTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGACAGGCCTTGTGCAGTaGACAGCAAAACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWTGLVQ*TAKLTQ
Trigger: CTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNCKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTGCCAAGGTCCCCACTaGAAAGGACTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELCQGPH*KGLLCH
Trigger: GTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTCTCTCTGGACTGGCTaGAGCCTGCAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSLWTG*SLQSRR
Trigger: TCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCCTTTCGAAAAATGGTaGCTGAGAGCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELPFEKW*LRAGPG
Trigger: GCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp AATGAGGCTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGCTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NEAADTQKLGSHIYNLVRLPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...CCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGAAACCGGCAAAGAATaGGGCAAAGGAGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELETGKE*GKGVSP
Trigger: GGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAAGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TTCTAKCLGVSPISSISNCRCAV*PGTSGA
Trigger: TGCTCCTGACGTTCCTGGCCAAACAGCACACCGACA...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGGTGTCCTCACCTGGTaGGATCTTGTTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELGVLTW*DLVVSQ
Trigger: CTGGCTGACAACAAGATCCCACCAGGTGAGGACACC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS-3UTR TCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCTTGTCAACAGGCAGTaGGCCCAGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELLVNRQ*AQSCLK
Trigger: TTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGAACTGAACTGGGCTaGGAGGTGGTCTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELRTELG*EVVLRP
Trigger: AGGCCTTAAGACCACCTCTCAGCCCAGTTCAGTTCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GCACCGACTTCAAGTAGGCGAGGAGCAGTGGCATTACCTCCCTTGAATAGCTGCGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: APTSSRRGAVALPPLNSCGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...GCAGCTATTCAAGGGAGGTAATGCCACTGCTCCTCGCCTACTTGAAGTCGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGTCTTATTCTTCTGACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAAGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: SLILLTWVWQIIITLPQEGCSVV*GSARPQ
Trigger: TTGCGGCCGTGCTGACCCGCAGACGACTGAACACCC...TTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTCAGAAGAATAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TCTTCCCCATCACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACACTTGTACAGCGAAATaGTTGGGAGTCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: SSPSLSSSNRRKELLPSYTCTAK*LGVSPI
Trigger: GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGT...GTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCAAACAGCGCAGCATTaGGTACAACTTGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELQTAQH*VQLARG
Trigger: ACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGGGTTCCTCAGAAGCTaGAGCATGCATTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWGFLRS*SMHSIS
Trigger: GCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGACAGAAGGAAGGAGCTaGTCCCGTCATACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELTEGRS*SRHTEA
Trigger: TGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp CACTCTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAAACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HSHRQTEGRSCSRHTEAQTSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...TTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTGCAAAGGACTTCTCTaGCACTGTGCAGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWCKGLL*HCAALF
Trigger: AAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGCCCTGAATAGTCTCTaGCAAGGTCCCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELALNSL*QGPHCK
Trigger: TTTGCAGTGGGGACCTTGGCAGAGACTATTCAGGGC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWLPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCTTTGCCTCATCTATaGGGATCAGAGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPLPHL*GSESAW
Trigger: CCATGCAGACTCTGATCCCCATAGATGAGGCAAAGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAAGCCTCTTCCAACATaGGCATCAGCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELKPLPT*ASAGDR
Trigger: TCTGTCCCCAGCTGATGCCCATGTTGGAAGAGGCTT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CCA 90 bp CATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATGAAGGAAGGCCACACTaGTGTTCACAGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: HVHNLYSEMLGSLPHQLNEGRPH*CSQRSP
Trigger: GGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTC...ATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGCCACATCTATAACCTaGTCAGGGCTGCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELATSIT*SGLLWY
Trigger: GTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGCAGCCCTGTTTTGTCTTGCACACCAATAATGGCAGGAAACCGGCAAAGAATTGCGGCCTTGGTGTCTaGTGGGATCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VQPCFVLHTNNGRKPAKNCGLGV*WDLVVS
Trigger: GCTGACAACAAGATCCCACCAGACACCAAGGCCGCA...ATTCTTTGCCGGTTTCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
3UTR CAA 72 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: SASMSTTCTAKC*GVSPISSISNS
Trigger: AGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCCCTTGAATAGCTGCTaGTATGGGGCTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWPLNSC*YGAVGF
Trigger: AAAACCTACAGCCCCATATCAGCAGCTATTCAAGGG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR TCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGTGGCATTACCTCCCTTaGATAGCTGCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELWHYLP*IAADMG
Trigger: CCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCA...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp CTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCTTATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVQRNAWESPPSAQSPTLMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...AAGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACATGGGGATCAGAGTCTaGATGGCCATGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TTCTAKCLGVSPISSISNMGIRV*MAMISL
Trigger: CAAGCTGATCATGGCCATGCAGACTCTGATCCCCAT...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR GCA 90 bp ACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCAGCTCAATCTCCAACAGCAGAGAATACGTATaGGTATCGCATTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTCTAKCLGVSPISSISNSREYV*VSHCPG
Trigger: CCCTGGGCAATGCGATACGCATACGTATTCTCTGCT...GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGACTTCTCTGCCACTGTaGAGCCCTGTTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELTSLPL*SPVLSC
Trigger: GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp AGCCGAAAAGGAAGGCAGAAACCTAGACAAAGTCGTCAAGATCCCGAGAGAAGTTACTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: SRKGRQKPRQSRQDPERSYSVSL*RAVRIR
Trigger: CCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTA...ACTTCTCTCGGGATCTTGACGACTTTGTCTAGGTTTCTGCCTTCCTTTTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR TCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGGCTCCAAATGGGTATaGGTCTCAGAATCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWGSKWV*VSESLV
Trigger: TACCAAAGATTCTGAGACTCATACCCATTTGGAGCC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR GCA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGAGCCCTGTTTTGTCTTaGACACCAATAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWSPVLS*TPIMAG
Trigger: TCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp GTGCAGCCCTGTTTTGTCTTGCACACCAATAATGGCAGGAAACCGGCAAAGAATCTTCCTTTCGAAAAATaGTGGCTGAGAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VQPCFVLHTNNGRKPAKNLPFEK*WLRAGP
Trigger: TGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAG...ATTCTTTGCCGGTTTCCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CCA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGACACTTTCCATGTATaGAAGGAAGGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELDTFHV*KEGHTG
Trigger: ACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CCA 90 bp AGTCTTATTCTTCTGACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAACCACAAGTCCCAGCCTaGAGCCGAAAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLILLTWVWQIIITLPQEPQVPA*SRKGRQ
Trigger: CTGCCTTCCTTTTCGGCTCCAGGCTGGGACTTGTGG...TTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTCAGAAGAATAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp AAATCCTCACTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCACTTATTCTTCTGACTTaGGTTTGGCAGATCATCATC +
Preference number: 4 (lower is better)
Translates to: KSSLHLASRTEVPAPQVPLILLT*VWQIII
Trigger: GATGATGATCTGCCAAACCCAAGTCAGAAGAATAAG...TGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAGTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp AGTCTTATTCTTCTGACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAAAGATCCCGAGAGAAGTaGGTAGGTACTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLILLTWVWQIIITLPQERSREK*VGTYSV
Trigger: AACAGAGTAAGTACCTACCCACTTCTCTCGGGATCT...TTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTCAGAAGAATAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CCA 90 bp GACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAACTTTAGTCTTCAAACTTCTGACTTGGGTTTaGCAGATCATCATCACCCTT +
Preference number: 4 (lower is better)
Translates to: DLGLADHHHPSSRTLVFKLLTWV*QIIITL
Trigger: AAGGGTGATGATGATCTGCCAAACCCAAGTCAGAAG...TTTGAAGACTAAAGTTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS GCA 90 bp TGGGCCTTTCCCGCAACCTCCCGCTCGCCCTGGCCCGGTTACGCCTaGTCCGTACCCGACGGATGCGCTCGGTGTCCGGTAGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: WAFPATSRSPWPGYA*SVPDGCARCPVAAA
Trigger: AGCTGCTGCTACCGGACACCGAGCGCATCCGTCGGGTACGGAGCAGGCGTAACCGGGCCAGGGCGAGCGGGAGGTTGCGGGAAAGGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559588.5
ENST00000560798.5
ENST00000643542.1
ENST00000647115.1
CDS GCA 90 bp CCCGTTGCTCCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAAACTGGCGGATCTAGGACGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PVAPPPAVASGCSVV*GSARPQTGGSRTRK
Trigger: CTTCCTCGTCCTAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGGAGCAACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS CCA 90 bp GCTAGGGGTGAGAGTTGGGCCTTTCCCGCAACCTCCCGCTCGCCCTaGCCCGGTTACGCCTGCTCCGTACCCGACGGATGCGCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: ARGESWAFPATSRSP*PGYACSVPDGCARC
Trigger: ACACCGAGCGCATCCGTCGGGTACGGAGCAGGCGTAACCGGGCCAGGGCGAGCGGGAGGTTGCGGGAAAGGCCCAACTCTCACCCCTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559588.5
ENST00000560798.5
ENST00000643542.1
ENST00000647115.1
CDS-3UTR CAA 90 bp TCCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SAASRRQRVFSRLRVSTAVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...GGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CAA 90 bp CGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGTCGGCCGCCGAGGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: RLRVSTAANWRIWGSAAEVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...CTCGGCGGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS CCA 90 bp GGGTCCGGGCAGGAAGGTGCTGAGCGGACCGCAGTGGGCGAATACTaGGGCTTGACCGGTGGCGTACAGTGGGAAGCTCGGAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: GSGQEGAERTAVGEY*GLTGGVQWEARRGE
Trigger: CTCTCCCCTCCGAGCTTCCCACTGTACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCACCTTCCTGCCCGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS-3UTR CAA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGCTTGAGGCTCTCCCGTaGCTCCGCCGCCAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGLEALP*LRRQPS
Trigger: CGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAG...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS TCA 90 bp CGGGATATGTCTGCTATGTGCACCGTGAACACAGGGCCCCCAGCCTaGGAACCCCACCCACTCCACCCGCCGGCCCGCTCACCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RDMSAMCTVNTGPPA*EPHPLHPPARSPPA
Trigger: TGCTGGAGGTGAGCGGGCCGGCGGGTGGAGTGGGTGGGGTTCTCAGGCTGGGGGCCCTGTGTTCACGGTGCACATAGCAGACATATCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560935.1
ENST00000643644.1
CDS TCA 90 bp GGCAGGAAGGTGCTGAGCGGACCGCAGTGGGCGAATACTGGGGCTTaGCCGGTGGCGTACAGTGGGAAGCTCGGAGGGGAGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: GRKVLSGPQWANTGA*PVAYSGKLGGESQG
Trigger: CCCCTGACTCTCCCCTCCGAGCTTCCCACTGTACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCACCTTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS TCA 90 bp CTAGGACGAGGAAGCAAGCACGTGGGGGTCCGGGCAGGAAGGTGCTaGGCGGACCGCAGTGGGCGAATACTGGGGCTTGACCGGTGGCGT +
Preference number: 5 (lower is better)
Translates to: LGRGSKHVGVRAGRC*ADRSGRILGLDRWR
Trigger: ACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCACCTTCCTGCCCGGACCCCCACGTGCTTGCTTCCTCGTCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS GCA 90 bp CTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTaGCTGCATGTAGGATGGCACGACTCGGGCCAGGGCAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LQHGHHHLAFPLPVH*LHVGWHDSGQGSQQ
Trigger: CTGCTGGCTGCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559588.5
ENST00000647115.1
CDS-3UTR CAA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCCTTGAGGCTCTCCCGTaGCTCCGCCGCCAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPLEALP*LRRQPS
Trigger: CGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAG...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: VRVPQLRSTPVRASSTAITRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS CCA 90 bp CACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGCAGCCAGCAGTGTTGGGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: HHLAFPLPVHCLHVG*HDSGQGSQQCWVPR
Trigger: CCTCGGAACCCAACACTGCTGGCTGCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559588.5
ENST00000647115.1
CDS-3UTR CAA 90 bp CGTAGCAATGGCTCCCAGGGCGCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: RSNGSQGAHSQLLGPGTATRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...AGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: KPKKLPVVGLEGLGPGGHGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...GTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CAA 90 bp AGGGCCTCCAGCACGGCCATCACCACCTGGCGTTCCCGCTCCCTGTTCACTGCCAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RASSTAITTWRSRSLFTASIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...GGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCCGTGCTGGAGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TCAGCGAGGCGCCCAGGGGGCTTCAGTGTGAGGGTCCCACAGCTGCGGAGCACCATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SARRPGGFSVRVPQLRSTIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...GGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCCGGGAGGTCACCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: KPKKLPVVGLEGLGPGGHLSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...GTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGACTTGAGGCTCTCCCGTaGCTCCGCCGCCAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: QAVSPELLESCRCAVWPGLEALP*LRRQPS
Trigger: CGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAG...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: WAGWPPCSASTPIPKMALGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GGCTGCCAGGGCAGGGATGGCCTCTCCAGCGTGCTCCAGCAACATGGCGTCGTATTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GCQGRDGLSSVLQQHGVVFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...TACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCTGCCCTGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: PKMALLRTSGSASWAVLNLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...GTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: WAGWPPCSASTPIPKMALLSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS CCA 90 bp CGTCAGGATCAGGGACTTGAGGCTGGAACACAGGTGGCAGGTGTTTaGTACCCAGCCTGCCCAAGAAAAGTCTCCGCCTGGCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RQDQGLEAGTQVAGV*YPACPRKVSAWPRP
Trigger: GGGGCGGGGCCAGGCGGAGACTTTTCTTGGGCAGGCTGGGTACCAAACACCTGCCACCTGTGTTCCAGCCTCAAGTCCCTGATCCTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558193.5
ENST00000560222.1
ENST00000643287.1
ENST00000647033.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCTTGAGGCTCTCCCGTaGCTCCGCCGCCAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQLEALP*LRRQPS
Trigger: CGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CGAGGGGTCCTCCAGGCCCTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: RGVLQALAHNLQQWGQQSVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...AGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SASTPIPKMALLRTSGSAVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: PHALPARPSRRWHCFAPRTRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RKPAKNGAKESPPAAAARSIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: DQSLHGHDQLGHQHPSERLTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...CCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: STGGQVPHRCCHGHDHVALTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTGCTGCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AMISLGTNIRARGTSSVLLTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...CAGCACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGGCAGGGATGGCCTCTCCACAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: GAKESPPAAAARAGMASPQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...TGGAGAGGCCATCCCTGCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCACTTGAGGCTCTCCCGTaGCTCCGCCGCCAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: CMAMISLGTNIRARGTSSLEALP*LRRQPS
Trigger: CGACGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAG...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WHCFAPRGLPLGRCSTAQVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...CTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: PMLCQHAHPEDGIASHLGMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQTRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCACTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CMAMISLGTNIRARGTSSLTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: LCQHAHPEDGIASHLGVCSNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTGCTCAACAGCACAGGGAGCAGCCGAGACACAAACTGGGCTGAGGCAGCACCCCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VLNSTGSSRDTNWAEAAPLSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...GGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS GCA 90 bp GGCCTTGTGCAGTGCACAGCAAAACTGACCCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTGAGGGCACTGCAGGATGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GLVQCTAKLTQSLMG*LPHIQVRALQDEEG
Trigger: CCCCTCCTCATCCTGCAGTGCCCTCACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTGGGTCAGTTTTGCTGTGCACTGCACAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000560935.1
ENST00000561199.5
ENST00000643644.1
ENST00000646915.1
CDS-3UTR CAA 90 bp TGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: CSASTPIPKMALLRTSGSMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGTTCCTGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: CSWAGWPPCSASTPIPKMRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...CATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCAGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCTCACAGCCAGCTCCTTGGCCCGGGGACTGCTGGGGTTCCTCAGAAGCTGCAGCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: AHSQLLGPGTAGVPQKLQRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...CTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGGAAACCGGCAAAGAATGGGGCAAAGGAGTCTCCCCCAGCCGCGGCTGCCAGGTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: RKPAKNGAKESPPAAAARCTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...CCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSTRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCAGGCTCTATTCTCTCTGGACTGGCTGCAGCCTGCAGTCTAGGAGAGGCCCAGGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: AGSILSGLAAACSLGEAQGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...CTGGGCCTCTCCTAGACTGCAGGCTGCAGCCAGTCCAGAGAGAATAGAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VGVLFGQERQEQQQCGLGSIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...ACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TCCTGGTGGGACTGGCCATCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SWWDWPSTGGQVPHRCCHSIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...GTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: CCHGHDHVAPAPGGEKGAFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...GGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTGAGGGTCCCACAGCTGCGGAGCACCCCTGTCAGGGCCTCCAGCACGGCCATCCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: VRVPQLRSTPVRASSTAILCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...GATGGCCGTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCAGCTCCGTCAGACAGCACGGCCAGCACCAGGAGTCCAGCTTTGCGCTGGTATATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: PAPSDSTASTRSPALRWYIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...ATACCAGCGCAAAGCTGGACTCCTGGTGCTGGCCGTGCTGTCTGACGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGCAGGGTGGCCCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: WAGWPPCSASTPIPKMALSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...CAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTGATCTGTTCCAAGTGGGGCGCCAGGCCCTCACCCATCAGACCCGATAAGGCTCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VICSKWGARPSPIRPDKALSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...AGCCTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACAGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVLSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS TCA 90 bp CACAGTGCTCTGTTTCTCTCTGCAGGGCCGTCAGGATCAGGGACTTaGGGCTGGAACACAGGTGGCAGGTGTTTGGTACCCAGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: HSALFLSAGPSGSGT*GWNTGGRCLVPSLP
Trigger: GGGCAGGCTGGGTACCAAACACCTGCCACCTGTGTTCCAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558193.5
ENST00000647033.1
CDS CCA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTaGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: QAVSPELLESCRCAV*PGTSGAATVRPWCP
Trigger: AGGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS CCA 90 bp CTCTGCAGGGCCGTCAGGATCAGGGACTTGAGGCTGGAACACAGGTaGCAGGTGTTTGGTACCCAGCCTGCCCAAGAAAAGTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: LCRAVRIRDLRLEHR*QVFGTQPAQEKSPP
Trigger: AGGCGGAGACTTTTCTTGGGCAGGCTGGGTACCAAACACCTGCCACCTGTGTTCCAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558193.5
ENST00000560222.1
ENST00000643287.1
ENST00000647033.1
CDS-3UTR CAA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: CCLARNVRSSNSAALVSGVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: SLIQKPKKLPVVGLEGLGMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: ARNVRSSNSAALVSGGILMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCTCAACAGCACAGGGCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: ALLRTSGSASWAVLNSTGRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...CCCTGTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: AHPEDGIASHLGVCLLGGRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...ACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: CCLARNVRSSNSAALVSGTRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDSIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: CLARNVRSSNSAALVSGGANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGGGCTGCTCTGGTACAGGAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: RAALVQEAEEAPNGDPLLANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...GAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTCCTGTACCAGAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: ARNVRSSNSAALVSGGILANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CLARNVRSSNSAALVSGGCKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCTTGTCAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: PCQQAVSPELLESCRCAVLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...AACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATCTGGGGGTCTTCTGACTTGGGTTaGGCAGATCATCATCACCCT +
Preference number: 5 (lower is better)
Translates to: RVFSRLRVSTAANWRIWGSSDLG*ADHHHP
Trigger: AGGGTGATGATGATCTGCCAAACCCAAGTCAGAAGA...CCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGCAACAGTGCGGCCTaGGTGTCCTCACCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSNSAA*VSSPGG
Trigger: CCCACCAGGTGAGGACACCAAGGCCGCACTGTTGCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS CCA 90 bp GGCCAGGCCTCCAAGCCTTCCTTTCGAAAAATGGTGGCTGAGAGCTaGGCCAGGCTGAGGCTCACACAGTGCTCTGTTTCTCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GQASKPSFRKMVAES*ARLRLTQCSVSLCR
Trigger: CCTGCAGAGAGAAACAGAGCACTGTGTGAGCCTCAGCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAGGCTTGGAGGCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558193.5
ENST00000558718.5
ENST00000559588.5
ENST00000560155.5
ENST00000560798.5
ENST00000561090.5
ENST00000561199.5
ENST00000642155.1
ENST00000643406.1
ENST00000643442.1
ENST00000643542.1
ENST00000644546.2
ENST00000646358.1
ENST00000646915.1
ENST00000647033.1
ENST00000647115.1
CDS-3UTR CAA 90 bp GATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: DQSLHGHDQLGHQHPSERVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...CCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: GIRVCMAMISLGTNIRARVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...TCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCGAGAGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: SERHIFSAEVGSHGGQSAMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...CGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCTCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000559253.1
ENST00000642155.1
ENST00000642520.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PHALPARPSRRWHCFAPRALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: KLSVCCLARNVRSSNSAACTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCTCTTGGGCGGTGCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PIPKMALLRTSGSASWAVQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...CACCGCCCAAGAGGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAATRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AGTCCAGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SPALRWYGLSLRKASSNMGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...CATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: PTSPRVSFRSRRSSRWWGANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...ACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCTCACAGCCAGCTCCTaGGCCCGGGGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELLTASS*ARGLLG
Trigger: CCCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGCAGATACGCAGAAGCTCGGGAGCCACATCTATAACCTGGTCAGGGCTGCTCTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LQIRRSSGATSITWSGLLFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...GAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGCCGAAGAAGCTCTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: QPRRAHLTKSLIQKPKKLFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...GAGCTTCTTCGGCTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCGAGAGGCACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SERHIFSAEVGSHGGQSACKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...CGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTGCCTCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWCKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLACKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGGGTCTGCCCAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: SASTPIPKMALLRTSGSAQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...GGCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGACAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: APQMLSRTRSCRSRARRGQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...TCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCCCATGCTCTGCCAGCACGCCCATCCCGAAGATGGCATTGCTTCGCACCTCGGCAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: PHALPARPSRRWHCFAPRQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...CCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTCATCGTCAAACAGAAGGAAGGAGCTGCTCCCGTCATACTGAGGCACAATGCCCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: LIVKQKEGAAPVILRHNALGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...GGCATTGTGCCTCAGTATGACGGGAGCAGCTCCTTCCTTCTGTTTGACGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: CCLARNVRSSNSAALVSGIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: QAVSPELLESCRCAVWPGIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GAAGCTGAAGAGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: EAEEAPNGDPLLQVLLQWSNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...CCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCTCTTCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: CCLARNVRSSNSAALVSGSNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...ACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: ALRWYGLSLRKASSNMGISNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...GATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCACTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAALSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQLSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS GCA 90 bp GTTGTATCCCTCTGGCCATTACCAGTCTCTTTTAGTGGCCCTGGCTaGCCCAGGCCAAGCCCAAATACACTGTCCACCCCTGTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: VVSLWPLPVSFSGPG*PRPSPNTLSTPVPV
Trigger: CACAGGGACAGGGGTGGACAGTGTATTTGGGCTTGGCCTGGGGCAGCCAGGGCCACTAAAAGAGACTGGTAATGGCCAGAGGGATACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561379.1
ENST00000646613.1
CDS GCA 90 bp GGCAGCCAGGACAGAAACTTTCAGGAGGTGTGGGCACAGGGTCTTTaGCAAGTTGGGACACATGAGACAGCAGCTCAGAGGGAGCCCAAC +
Preference number: 5 (lower is better)
Translates to: GSQDRNFQEVWAQGL*QVGTHETAAQREPN
Trigger: GTTGGGCTCCCTCTGAGCTGCTGTCTCATGTGTCCCAACTTGGCAAAGACCCTGTGCCCACACCTCCTGAAAGTTTCTGTCCTGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559635.1
ENST00000646134.1
CDS CCA 90 bp TCCCTGAACTCCCACTGGCTTAGTGGGATCAGGGTTGTATCCCTCTaGCCATTACCAGTCTCTTTTAGTGGCCCTGGCTGCCCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: SLNSHWLSGIRVVSL*PLPVSFSGPGCPRP
Trigger: TGGCCTGGGGCAGCCAGGGCCACTAAAAGAGACTGGTAATGGCCAGAGGGATACAACCCTGATCCCACTAAGCCAGTGGGAGTTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561379.1
ENST00000646613.1
CDS-3UTR CAA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: KLSVCCLARNVRSSNSAARMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGGCGCCCAATGGTGACCCACTCCTCCAAGTCCTCCTTCAGTGGCAGGGCATGCGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: RRPMVTHSSKSSFSGRACALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...GCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGGCTGTACGTGCAGCGCCGCAAGTCAGGGTCGTCTACCTGGTCGCAGAGGCCCTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: RLYVQRRKSGSSTWSQRPFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...GGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGCGCTGCACGTACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLACTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQSIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCATTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: NVRSSNSAALVSGGILLSFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACAATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: RVCMAMISLGTNIRARGTIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...TGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: AVWPGTSGAATVRPWCLVSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...CACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: WPGTSGAATVRPWCLVGSVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...AGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGCTCTGGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: GSGSAQAEGPHGLLTGIPSNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...GGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CLARNVRSSNSAALVSGGALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: RASAPQMLSRTRSCRSRASKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...GGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAACTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAGTGCTGTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: AMISLGTNIRARGTSSVLCTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...CAGCACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATACCAGGAGTCCAGCTTaGCGCTGGTATGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNTRSPA*RWYGLS
Trigger: CGAGAGCCCATACCAGCGCAAAGCTGGACTCCTGGT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp ACGTATGCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAAGGGTCCTCCAGGCCCTaGCACACAATCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: TYAYRIAQGHISSYLQAEGSSRP*HTICSS
Trigger: ACTGCTGCAGATTGTGTGCAAGGGCCTGGAGGACCC...TTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGCATACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: CLKAVGVLFGQERQEQQQANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...CTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTTTCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AACATGGCGTCGTATTCAGCCTGTGGAGCCAGGTCAGGGGCTGATCATCATCTTTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: NMASYSACGARSGADHHLFRGAA*TGLVQC
Trigger: GCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAA...AAGATGATGATCAGCCCCTGACCTGGCTCCACAGGCTGAATACGACGCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGCKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGGGAAAAAGGAGCCCCCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: LSRTRSCRSRARRGKRSPLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...GGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCTCGGGGTCTGCCTCTaGGGCGGTGCTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELLGVCL*GGAQQH
Trigger: GTGCTGTTGAGCACCGCCCAAGAGGCAGACCCCGAG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCAGGAGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: QAVSPELLESCRCAVWPGVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...TCCTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCAAGGTCCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: PRSPLQRTSLPLCSPVLSSNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...AGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTTCACCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLASPGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGGTGA...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATATGGCCATGATCAGCTaGGGCACCAACATCCGAGCG +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNMAMIS*GTNIRA
Trigger: CGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCAT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGGAGGTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: SAPQMLSRTRSCRSRARRFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...CCTCCTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCCCGCGCCAGTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: GKCPTDVVTDTIMSLPRQFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...CTGGCGCGGGAGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCCCACTGCAAAGGACTTCTCTGCCACTGTGCAGCCCTGTTTTGTCTTGCACACTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: PHCKGLLCHCAALFCLAHCTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...GTGTGCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCATGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: NVRSSNSAALVSGGILLSCTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGCAAACAGCGCAGCATaGCGTACAACTTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNANSAA*RTTCEG
Trigger: CCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNCKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SASMSTTCTAKCLGVSPICKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLAQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTACTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGTCTCATTCAGAAGCCGAAGAAGCTCCCGGTGGTGGGGTTGGAAGGCCTCGGGCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: SLIQKPKKLPVVGLEGLGLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...CCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTCTGAATGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: SFALVWALAPQSLFQHGHSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp ATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: IRVCMAMISLGTNIRARGVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...GCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCTGTCGGTGTGCTGTTaGGCCAGGAACGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWLSVCC*ARNVRS
Trigger: GCTCCTGACGTTCCTGGCCAAACAGCACACCGACAG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CCTCACTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTAATCCTCACTCCACCTaGCGTCTAGAACTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PHSTLRLELKSLPHKSQPNPHST*RLELKS
Trigger: GGACTTCAGTTCTAGACGCAAGGTGGAGTGAGGATT...AGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CAA 90 bp CTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTGGAGCTCTTCTGACTTGGGTTaGGCAGATCATCATCACCCT +
Preference number: 5 (lower is better)
Translates to: LHLASRTEVPAPQVPAWSSSDLG*ADHHHP
Trigger: AGGGTGATGATGATCTGCCAAACCCAAGTCAGAAGA...GCTCCAGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CAA 90 bp TCGCCAGCGGGTGTTCAGTCGTCTGCGGGTCAGCACGGCCGCAAACTGGCGGATTCTTATTCTTCTGACTaGGGTTTGGCAGATCATCAT +
Preference number: 5 (lower is better)
Translates to: SPAGVQSSAGQHGRKLADSYSSD*GLADHH
Trigger: ATGATGATCTGCCAAACCCAAGTCAGAAGAATAAGA...ATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGTCACCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQSPGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGGTGA...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGCAACAGTGCGGCCTaGGTGTCCTCACCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSNSAA*VSSPGG
Trigger: CCCACCAGGTGAGGACACCAAGGCCGCACTGTTGCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS GCA 90 bp TCAAGATCCCGAGAGAAGTGGGTAGGTACTTACTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGGGACTTGAGGCTGGAACACAGGTGG +
Preference number: 5 (lower is better)
Translates to: SRSREKWVGTYSVSL*RAVRIRDLRLEHRW
Trigger: CCACCTGTGTTCCAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTAAGTACCTACCCACTTCTCTCGGGATCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560222.1
ENST00000643287.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGTCAGGATCAGGGACTaGAGGCTCTCCCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELVRIRD*RLSRCS
Trigger: GGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGAC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CACATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HIFSAEVGSHGGQSAQGVALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...TACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGCTCTGGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GSGSAQAEGPHGLLTGIPALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...GGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: ARNVRSSNSAALVSGGILSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTAAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CTTGCACACAATCTGCAGCAGTGGGGGCAGCAGTCTCTGCCTGATGTGGTCGCCAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: LAHNLQQWGQQSLPDVVASKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...GGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCAGATTGTGTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CAGCCTCAGGGACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: QPQGQPCKAASGAGSKWVFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...TACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTCCCTGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp TGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: CLARNVRSSNSAALVSGGFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...CCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AAGCTGTCGGTGTGCTGTTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: KLSVCCLARNVRSSNSAAFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...GGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAACAGCACACCGACAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CAACAGGCAGTGAGCCCAGAGCTGCTTGAAAGCTGTCGGTGTGCTGTTTGGCCACAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: QQAVSPELLESCRCAVWPQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...TGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TCAACAGGCGGGCAAGTGCCCCACAGATGTTGTCACGGACACGATCATGTCGCTCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: STGGQVPHRCCHGHDHVAQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...AGCGACATGATCGTGTCCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: SFALVWALAPQSLFQHGHQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGCATTGCGTACAACTaGCGAGGGGTCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSIAYN*RGVLQA
Trigger: GGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTGCAAAGCAGCAGTGTaGGGTTCCGAGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWCKAAV*GSEGQL
Trigger: AAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GACAGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGCAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: DSPVRQQVGLAPNGYESQQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...CTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGCTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: GLRGGLKAWAGSILSGLALCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...AGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558233.1
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000645873.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TTTGGCCAGGAACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: FGQERQEQQQCGLGVWWDLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...ATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTCCTGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGATCCCGAAGATGGCATaGCTTCGCACCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWIPKMA*LRTSGS
Trigger: AGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGAT...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGAGGCACATCTTCAAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: CMAMISLGTNIRARGTSSSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...TGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCCCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGTAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: ALGSPQNSPGHSRPWLGGSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...ACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp ATCTTCAGTGCTGAGGTAGGGAGCCATGGTGGTCAGAGTGCGCAGGGAGTAGAAGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: IFSAEVGSHGGQSAQGVEVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...TTCTACTCCCTGCGCACTCTGACCACCATGGCTCCCTACCTCAGCACTGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGAGTAGAAGAGCAGCCCAGGAGAGCCCACCTCACCAAGAGTCTCATTCAGAAGGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: GVEEQPRRAHLTKSLIQKVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...CTTCTGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS GCA 90 bp GCAAACAGGAGAGATCTCCTCCAATCACCCTTCAATACCTTCCTCTaGACACAGTGGCCAGGCTCAATGGGGCAGCCAGGACAGAAACTT +
Preference number: 5 (lower is better)
Translates to: ANRRDLLQSPFNTFL*TQWPGSMGQPGQKL
Trigger: AAGTTTCTGTCCTGGCTGCCCCATTGAGCCTGGCCACTGTGTGCAGAGGAAGGTATTGAAGGGTGATTGGAGGAGATCTCTCCTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559635.1
ENST00000646134.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCGTATGCGTATCGCATaGCCCAGGGCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNRMRIA*PRATFL
Trigger: TAGAAATGTGGCCCTGGGCAATGCGATACGCATACG...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CCTGCAAAGCAGCAGTGTTGGGTTCCGAGGGGCAGCTTTGACAGGCCTTGTGCAAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: PAKQQCWVPRGSFDRPCASKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...TGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWCTAKC*GVSPIS
Trigger: GCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACA...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GGGATCAGAGTCTGCATGGCCATGATCAGCTTGGGCACCAACATCCGAGCGAGACTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: GIRVCMAMISLGTNIRARLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...TCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATGCAGACTCTGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GGATCTGCACAGGCTGAAGGTCCTCACGGCCTGTTAACAGGAATTCCCGCAGGTCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: GSAQAEGPHGLLTGIPAGLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...ACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCTTCAGCCTGTGCAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000561462.5
ENST00000642155.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATGTGTCTGGTGGGATCTaGTTGTCAGCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: SPVRQQVGLAPNGYESQNVSGGI*LSARMR
Trigger: CCTCATTCTGGCTGACAACAAGATCCCACCAGACAC...ATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGCAACAGTGCGGCCTaGGTGTCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSNSAA*VSGGIL
Trigger: CAAGATCCCACCAGACACCAAGGCCGCACTGTTGCT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCAAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAASKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AGCTTTGCGCTGGTATGGGCTCTCGCTCCGCAAAGCCTCTTCCAACATGGGCATAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: SFALVWALAPQSLFQHGHSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...ATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTGAGAGGTGGTCTTAAGGCCTGGGCAGGCTCTATTCTCTCTGGACTGGCTGCATTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: LRGGLKAWAGSILSGLAAFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...TGCAGCCAGTCCAGAGAGAATAGAGCCTGCCCAGGCCTTAAGACCACCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GTGTGCAGCAAGGGTGGCAGGAGACGATTCTTCAGTAAGGCCTTGCTCTTGACTCAGCATGTCCACAACTaGTACAGCGAAATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: VCSKGGRRRFFSKALLLTQHVHN*YSEMLG
Trigger: CCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTG...AGTCAAGAGCAAGGCCTTACTGAAGAATCGTCTCCTGCCACCCTTGCTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp AGTGCCAGCATGTCCACAACTTGTACAGCGAAATGCTTGGGAGTCTCCCCCATCCAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: SASMSTTCTAKCLGVSPIQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...GATGGGGGAGACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp CTCCACCTTGCGTCTAGAACTGAAGTCCCTGCCCCACAAGTCCCAGCCTGGAGCTCTTATTCTTCTGACTaGGGTTTGGCAGATCATCAT +
Preference number: 5 (lower is better)
Translates to: LHLASRTEVPAPQVPAWSSYSSD*GLADHH
Trigger: ATGATGATCTGCCAAACCCAAGTCAGAAGAATAAGA...GCTCCAGGCTGGGACTTGTGGGGCAGGGACTTCAGTTCTAGACGCAAGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp AACGTCAGGAGCAGCAACAGTGCGGCCTTGGTGTCTGGTGGGATCTTGTTGTCAAGTAAGGCCTTGCTCTaGACTTTGACCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: NVRSSNSAALVSGGILLSSKALL*TLTKKV
Trigger: CACTTTCTTGGTCAAAGTCAAGAGCAAGGCCTTACT...TGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GCGTATCGCATTGCCCAGGGCCACATTTCTAGCTACCTCCAGGCAGAATGTGAGTTCTTCAGTAAGGCCTaGCTCTTGACTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: AYRIAQGHISSYLQAECEFFSKA*LLTLTK
Trigger: CTTGGTCAAAGTCAAGAGCAAGGCCTTACTGAAGAA...CTCACATTCTGCCTGGAGGTAGCTAGAAATGTGGCCCTGGGCAATGCGATACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558046.5
ENST00000558780.5
ENST00000642155.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCAGCCCTGTTTTGTCTaGCACACCAATAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWQPCFV*HTNNGR
Trigger: CCTGCCATTATTGGTGTGCAAGACAAAACAGGGCTG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGAGTGCCCCACAGATGTaGTCACGGACACGATCATGT +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELSAPQM*SRTRSC
Trigger: ACATGATCGTGTCCGTGACAACATCTGTGGGGCACT...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGGCCTTGCTCTTGACTTaGACCAAGAAAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELALLLT*TKKVRQ
Trigger: CTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAGGC...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000646019.1
CDS-3UTR CAA 90 bp GTAAGGCAGCAAGTGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: VRQQVGLAPNGYESQNLWLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...CCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCACTTGCTGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp TGGGGCTGGCTCCAAATGGGTATGAGTCTCAGAATCTTTGGTAAGGCAGAACTGCTGTGCAGCCCTGTTTaGTCTTGCACACCAATAATG +
Preference number: 5 (lower is better)
Translates to: WGWLQMGMSLRIFGKAELLCSPV*SCTPIM
Trigger: CATTATTGGTGTGCAAGACAAAACAGGGCTGCACAG...CAGTTCTGCCTTACCAAAGATTCTGAGACTCATACCCATTTGGAGCCAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558780.5
ENST00000560155.5
ENST00000561462.5
ENST00000642155.1
ENST00000643406.1
ENST00000644546.2
ENST00000645096.1
ENST00000646019.1
CDS-3UTR CAA 90 bp GACTTGGGTTTGGCAGATCATCATCACCCTTCCTCAAGAACTTTAGTCTTCAAAAATCCTCACTCCACCTaGCGTCTAGAACTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: DLGLADHHHPSSRTLVFKNPHST*RLELKS
Trigger: GGACTTCAGTTCTAGACGCAAGGTGGAGTGAGGATT...TTTGAAGACTAAAGTTCTTGAGGAAGGGTGATGATGATCTGCCAAACCCAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561034.1
ENST00000644865.1
CDS GCA 72 bp CCCGCAACCTCCCGCTCGCCCTGGCCCGGTTACGCCTaGTCCGTACCCGACGGATGCGCTCGGTGTCCGGTA +
Preference number: 6 (lower is better)
Translates to: PATSRSPWPGYA*SVPDGCARCPV
Trigger: TACCGGACACCGAGCGCATCCGTCGGGTACGGAGCAGGCGTAACCGGGCCAGGGCGAGCGGGAGGTTGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559588.5
ENST00000560798.5
ENST00000643542.1
ENST00000647115.1
CDS GCA 72 bp CCGCCGCCAGCCGTCGCCAGCGGGTGTTCAGTCGTCTaGGGGTCAGCACGGCCGCAAACTGGCGGATCTAGG +
Preference number: 6 (lower is better)
Translates to: PPPAVASGCSVV*GSARPQTGGSR
Trigger: CCTAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGACGGCTGGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS GCA 72 bp CCCTGGCCCGGTTACGCCTGCTCCGTACCCGACGGATaGGCTCGGTGTCCGGTAGCAGCAGCTCCCGTAGGA +
Preference number: 6 (lower is better)
Translates to: PWPGYACSVPDG*ARCPVAAAPVG
Trigger: TCCTACGGGAGCTGCTGCTACCGGACACCGAGCGCATCCGTCGGGTACGGAGCAGGCGTAACCGGGCCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559588.5
ENST00000560798.5
ENST00000643542.1
ENST00000647115.1
CDS CCA 72 bp GAGAGTTGGGCCTTTCCCGCAACCTCCCGCTCGCCCTaGCCCGGTTACGCCTGCTCCGTACCCGACGGATGC +
Preference number: 6 (lower is better)
Translates to: ESWAFPATSRSP*PGYACSVPDGC
Trigger: GCATCCGTCGGGTACGGAGCAGGCGTAACCGGGCCAGGGCGAGCGGGAGGTTGCGGGAAAGGCCCAACTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559588.5
ENST00000560798.5
ENST00000643542.1
ENST00000647115.1
CDS TCA 72 bp TCTGCTATGTGCACCGTGAACACAGGGCCCCCAGCCTaGGAACCCCACCCACTCCACCCGCCGGCCCGCTCA +
Preference number: 6 (lower is better)
Translates to: SAMCTVNTGPPA*EPHPLHPPARS
Trigger: TGAGCGGGCCGGCGGGTGGAGTGGGTGGGGTTCTCAGGCTGGGGGCCCTGTGTTCACGGTGCACATAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560935.1
ENST00000643644.1
CDS CAA 90 bp GGGCAGGAAGGTGCTGAGCGGACCGCAGTGGGCGAATACTGGGGCTaGACCGGTGGCGTACAGTGGGAAGCTCGGAGGGGAGAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: GQEGAERTAVGEYWG*TGGVQWEARRGESG
Trigger: CCCTGACTCTCCCCTCCGAGCTTCCCACTGTACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCACCTTCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS TCA 72 bp GTGCTGAGCGGACCGCAGTGGGCGAATACTGGGGCTTaGCCGGTGGCGTACAGTGGGAAGCTCGGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: VLSGPQWANTGA*PVAYSGKLGGE
Trigger: CTCCCCTCCGAGCTTCCCACTGTACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS TCA 72 bp GGAAGCAAGCACGTGGGGGTCCGGGCAGGAAGGTGCTaGGCGGACCGCAGTGGGCGAATACTGGGGCTTGAC +
Preference number: 6 (lower is better)
Translates to: GSKHVGVRAGRC*ADRSGRILGLD
Trigger: GTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCACCTTCCTGCCCGGACCCCCACGTGCTTGCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS CCA 72 bp GCGGACCGCAGTGGGCGAATACTGGGGCTTGACCGGTaGCGTACAGTGGGAAGCTCGGAGGGGAGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: ADRSGRILGLDR*RTVGSSEGRVR
Trigger: CCTGACTCTCCCCTCCGAGCTTCCCACTGTACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS CAA 72 bp GGTGCTGAGCGGACCGCAGTGGGCGAATACTGGGGCTaGACCGGTGGCGTACAGTGGGAAGCTCGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: GAERTAVGEYWG*TGGVQWEARRG
Trigger: TCCCCTCCGAGCTTCCCACTGTACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS CCA 72 bp GCTCCCGTAGGAGCTGCTCTAGCCCGGCTGACTCCATaGCAGCAACTGAGCCGCCGCTACTGGGCCGAAAAG +
Preference number: 6 (lower is better)
Translates to: APVGAALARLTP*QQLSRRYWAEK
Trigger: CTTTTCGGCCCAGTAGCGGCGGCTCAGTTGCTGCCATGGAGTCAGCCGGGCTAGAGCAGCTCCTACGGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000558780.5
ENST00000559253.1
ENST00000559588.5
ENST00000560155.5
ENST00000561034.1
ENST00000561090.5
ENST00000642520.1
ENST00000643406.1
ENST00000643442.1
ENST00000644865.1
ENST00000646019.1
ENST00000647115.1
CDS CCA 72 bp GCGTTCCCGCTCCCTGTTCACTGCCTGCATGTAGGATaGCACGACTCGGGCCAGGGCAGCCAGCAGTGTTGG +
Preference number: 6 (lower is better)
Translates to: AFPLPVHCLHVG*HDSGQGSQQCW
Trigger: CCAACACTGCTGGCTGCCCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559588.5
ENST00000647115.1
CDS CCA 72 bp CAGGAAGGTGCTGAGCGGACCGCAGTGGGCGAATACTaGGGCTTGACCGGTGGCGTACAGTGGGAAGCTCGG +
Preference number: 6 (lower is better)
Translates to: QEGAERTAVGEY*GLTGGVQWEAR
Trigger: CCGAGCTTCCCACTGTACGCCACCGGTCAAGCCCCAGTATTCGCCCACTGCGGTCCGCTCAGCACCTTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000557996.1
ENST00000560222.1
ENST00000561090.5
ENST00000643287.1
ENST00000643442.1
ENST00000643723.1
CDS CAA 90 bp ACTCGGGCCAGGGCAGCCAGCAGTGTTGGGTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGCACAGCAAAACTGACCCAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: TRARAASSVGFRGAA*TGLVQCTAKLTQSL
Trigger: GAGGCTCTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGGCTGCCCTGGCCCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559588.5
ENST00000647115.1
CDS CAA 90 bp GCCCAGCCTCTCCTCACCAGCAGTGTTGGGTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGCACAGCAAAACTGACCCAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: AQPLLTSSVGFRGAA*TGLVQCTAKLTQSL
Trigger: GAGGCTCTGGGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGGTGAGGAGAGGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560935.1
ENST00000643644.1
CDS CCA 72 bp AGGGTTTTCAGTGCCAGGGAAGGGCGAATGCTCACCTaGTGTTCACAGAGATCTCCCCCACGGCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: RVFSAREGRMLT*CSQRSPPRQHR
Trigger: CCTGTGCTGCCGTGGGGGAGATCTCTGTGAACACCAGGTGAGCATTCGCCCTTCCCTGGCACTGAAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000560935.1
ENST00000561199.5
ENST00000643644.1
ENST00000646915.1
CDS CCA 72 bp CAGGGACTTGAGGCTGGAACACAGGTGGCAGGTGTTTaGTACCCAGCCTGCCCAAGAAAAGTCTCCGCCTGG +
Preference number: 6 (lower is better)
Translates to: QGLEAGTQVAGV*YPACPRKVSAW
Trigger: CCAGGCGGAGACTTTTCTTGGGCAGGCTGGGTACCAAACACCTGCCACCTGTGTTCCAGCCTCAAGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558193.5
ENST00000560222.1
ENST00000643287.1
ENST00000647033.1
CDS CAA 72 bp AGGGCAGCCAGCAGTGTTGGGTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGCACAGCAAAACTGACC +
Preference number: 6 (lower is better)
Translates to: RAASSVGFRGAA*TGLVQCTAKLT
Trigger: GGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGGCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559588.5
ENST00000647115.1
CDS CAA 90 bp ACACAGTGCTCTGTTTCTCTCTGCAGGGCCGTCAGGATCAGGGACTaGAGGCTGGAACACAGGTGGCAGGTGTTTGGTACCCAGCCTGCC +
Preference number: 6 (lower is better)
Translates to: TQCSVSLCRAVRIRD*RLEHRWQVFGTQPA
Trigger: GGCAGGCTGGGTACCAAACACCTGCCACCTGTGTTCCAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGCACTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558193.5
ENST00000647033.1
CDS GCA 72 bp CAGTGCACAGCAAAACTGACCCAGAGCCTCATGGGCTaGCTTCCGCACATTCAGGTGAGGGCACTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: QCTAKLTQSLMG*LPHIQVRALQD
Trigger: ATCCTGCAGTGCCCTCACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTGGGTCAGTTTTGCTGTGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000560935.1
ENST00000561199.5
ENST00000643644.1
ENST00000646915.1
CDS GCA 72 bp CTCTGGCCATTACCAGTCTCTTTTAGTGGCCCTGGCTaGCCCAGGCCAAGCCCAAATACACTGTCCACCCCT +
Preference number: 6 (lower is better)
Translates to: LWPLPVSFSGPG*PRPSPNTLSTP
Trigger: AGGGGTGGACAGTGTATTTGGGCTTGGCCTGGGGCAGCCAGGGCCACTAAAAGAGACTGGTAATGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561379.1
ENST00000646613.1
CDS CAA 72 bp CTCCTCACCAGCAGTGTTGGGTTCCGAGGGGCAGCTTaGACAGGCCTTGTGCAGTGCACAGCAAAACTGACC +
Preference number: 6 (lower is better)
Translates to: LLTSSVGFRGAA*TGLVQCTAKLT
Trigger: GGTCAGTTTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560935.1
ENST00000643644.1
CDS CAA 72 bp TCTGTTTCTCTCTGCAGGGCCGTCAGGATCAGGGACTaGAGGCTGGAACACAGGTGGCAGGTGTTTGGTACC +
Preference number: 6 (lower is better)
Translates to: SVSLCRAVRIRD*RLEHRWQVFGT
Trigger: GGTACCAAACACCTGCCACCTGTGTTCCAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558193.5
ENST00000560222.1
ENST00000643287.1
ENST00000647033.1
CDS CAA 72 bp ACTTTCAGGAGGTGTGGGCACAGGGTCTTTGCCAAGTaGGGACACATGAGACAGCAGCTCAGAGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: TFRRCGHRVFAK*GHMRQQLRGSP
Trigger: TGGGCTCCCTCTGAGCTGCTGTCTCATGTGTCCCAACTTGGCAAAGACCCTGTGCCCACACCTCCTGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559635.1
ENST00000646134.1
CDS TCA 72 bp TGTCCTCACCTGGTGGGATCTTGTTGTCAGCCAGAATaGGGCTGCAGATACGCAGAAGCTCGGGAGCCACAT +
Preference number: 6 (lower is better)
Translates to: CPHLVGSCCQPE*GCRYAEAREPH
Trigger: ATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTCATTCTGGCTGACAACAAGATCCCACCAGGTGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561462.5
ENST00000645096.1
CDS GCA 72 bp ACAGTGCCTGCAAACAGGAGAGATTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGGGACTTGAGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: TVPANRRDSVSL*RAVRIRDLRLS
Trigger: GGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAATCTCTCCTGTTTGCAGGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558780.5
ENST00000646019.1
CDS CCA 72 bp TCCCACTGGCTTAGTGGGATCAGGGTTGTATCCCTCTaGCCATTACCAGTCTCTTTTAGTGGCCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: SHWLSGIRVVSL*PLPVSFSGPGC
Trigger: GCAGCCAGGGCCACTAAAAGAGACTGGTAATGGCCAGAGGGATACAACCCTGATCCCACTAAGCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561379.1
ENST00000646613.1
CDS GCA 72 bp CGAGAGAAGTGGGTAGGTACTTACTCTGTTTCTCTCTaGAGGGCCGTCAGGATCAGGGACTTGAGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: REKWVGTYSVSL*RAVRIRDLRLE
Trigger: TTCCAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGTAAGTACCTACCCACTTCTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560222.1
ENST00000643287.1
CDS CCA 72 bp TCCAAGCCTTCCTTTCGAAAAATGGTGGCTGAGAGCTaGGCCAGGCTGAGGCTCACACAGTGCTCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SKPSFRKMVAES*ARLRLTQCSVS
Trigger: AGAAACAGAGCACTGTGTGAGCCTCAGCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAGGCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000354464.11
ENST00000558046.5
ENST00000558193.5
ENST00000558718.5
ENST00000559588.5
ENST00000560155.5
ENST00000560798.5
ENST00000561090.5
ENST00000561199.5
ENST00000642155.1
ENST00000643406.1
ENST00000643442.1
ENST00000643542.1
ENST00000644546.2
ENST00000646358.1
ENST00000646915.1
ENST00000647033.1
ENST00000647115.1
CDS GCA 72 bp CTGAGATGGGATGGGGAGACTTATTGTACAGCGAAATaGTTGGGAGTCTCCCCCATCAGCTCAATCTCCAAC +
Preference number: 6 (lower is better)
Translates to: LRWDGETYCTAK*LGVSPISSISN
Trigger: GTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAATAAGTCTCCCCATCCCATCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560798.5
ENST00000643542.1
CDS CCA 72 bp GATGGGATGGGGAGACTTATTGTACAGCGAAATGCTTaGGAGTCTCCCCCATCAGCTCAATCTCCAACTCTT +
Preference number: 6 (lower is better)
Translates to: DGMGRLIVQRNA*ESPPSAQSPTL
Trigger: AAGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAATAAGTCTCCCCATCCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560798.5
ENST00000643542.1
CDS CAA 72 bp AGATGGGATGGGGAGACTTATTGTACAGCGAAATGCTaGGGAGTCTCCCCCATCAGCTCAATCTCCAACTCT +
Preference number: 6 (lower is better)
Translates to: RWDGETYCTAKC*GVSPISSISNS
Trigger: AGAGTTGGAGATTGAGCTGATGGGGGAGACTCCCAAGCATTTCGCTGTACAATAAGTCTCCCCATCCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560798.5
ENST00000643542.1