RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IPCEF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000074706

Ensembl transcript IDs: ENST00000265198.8, ENST00000367220.8, ENST00000422970.6, ENST00000470622.1, ENST00000484827.1, ENST00000517438.5, ENST00000518162.1, ENST00000519091.5, ENST00000519190.1, ENST00000519344.5, ENST00000519405.5, ENST00000520261.1, ENST00000522590.1

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACAGCTCACAGACACTGCAGGACTGGGTATAGGAATTGGCCCTTaGACCCCAGGAAACTACCCCAAATGCATTTCAGAGATGACCCGG +
Preference number: 1 (lower is better)
Translates to: PQLTDTAGLGIGIGP*TPGNYPKCISEMTR
Trigger: CCGGGTCATCTCTGAAATGCATTTGGGGTAGTTTCCTGGGGTCCAAGGGCCAATTCCTATACCCAGTCCTGCAGTGTCTGTGAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CCA 90 bp AGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTaGGGGCTCCGGGCCAGGCACTTCACTGTAATAATCCACAATCAT +
Preference number: 1 (lower is better)
Translates to: REPLGVLRLKFLLHH*GLRARHFTVIIHNH
Trigger: ATGATTGTGGATTATTACAGTGAAGTGCCTGGCCCGGAGCCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 90 bp GCAAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTaGTCAATGCCTCATTCAAGGAGACGAGTGGCTTTCTGTGAGGAG +
Preference number: 1 (lower is better)
Translates to: ARELLPAPRHRETCV*SMPHSRRRVAFCEE
Trigger: CTCCTCACAGAAAGCCACTCGTCTCCTTGAATGAGGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 90 bp CTGAGCAGCCATGGTTTTCTCTCTCATTCCACAGCTCACAGACACTaGAGGACTGGGTATAGGAATTGGCCCTTGGACCCCAGGAAACTA +
Preference number: 1 (lower is better)
Translates to: LSSHGFLSHSTAHRH*RTGYRNWPLDPRKL
Trigger: TAGTTTCCTGGGGTCCAAGGGCCAATTCCTATACCCAGTCCTGCAGTGTCTGTGAGCTGTGGAATGAGAGAGAAAACCATGGCTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CCA 90 bp CGGGCCAGGCACTTCACTGTAATAATCCACAATCATCTCAGAGCATaGGGCAGCGGGAGGGGGCTGAAAACACACCAATTTGCAAACTAC +
Preference number: 1 (lower is better)
Translates to: RARHFTVIIHNHLRA*GSGRGLKTHQFANY
Trigger: GTAGTTTGCAAATTGGTGTGTTTTCAGCCCCCTCCCGCTGCCCCATGCTCTGAGATGATTGTGGATTATTACAGTGAAGTGCCTGGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 90 bp ATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCTATaGAGCATTTCTCATCACATGGAAAAGGCACCACCATTCCATACC +
Preference number: 1 (lower is better)
Translates to: MEHASSFSSPTCHCL*SISHHMEKAPPFHT
Trigger: GGTATGGAATGGTGGTGCCTTTTCCATGTGATGAGAAATGCTTCATAGACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 90 bp GGCTTCCCTAGGTGGAGAAGTACCCACATGTTTGCTGGGCCAAACTaGCTGGCCTGGCCTCTTATCTTAGAGAAGTTTCTAGCAGTACAA +
Preference number: 1 (lower is better)
Translates to: GFPRWRSTHMFAGPN*LAWPLILEKFLAVQ
Trigger: TTGTACTGCTAGAAACTTCTCTAAGATAAGAGGCCAGGCCAGTCAGTTTGGCCCAGCAAACATGTGGGTACTTCTCCACCTAGGGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CCA 90 bp TCTCATTCCACAGCTCACAGACACTGCAGGACTGGGTATAGGAATTaGCCCTTGGACCCCAGGAAACTACCCCAAATGCATTTCAGAGAT +
Preference number: 1 (lower is better)
Translates to: SHSTAHRHCRTGYRN*PLDPRKLPQMHFRD
Trigger: ATCTCTGAAATGCATTTGGGGTAGTTTCCTGGGGTCCAAGGGCCAATTCCTATACCCAGTCCTGCAGTGTCTGTGAGCTGTGGAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 90 bp CCCCTAACCTGCATAAAGTGTGAAAACACCAAGCTGTCCTTTGAATaGGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATG +
Preference number: 1 (lower is better)
Translates to: PLTCIKCENTKLSFE*VEYGTRLLLQLSHM
Trigger: CATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCATTCAAAGGACAGCTTGGTGTTTTCACACTTTATGCAGGTTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 90 bp GTGTGTCTGCTCAATGCCTCATTCAAGGAGACGAGTGGCTTTCTGTaGGGAGAGAAATTATCCCCCTTCCACAGTCCATTTCATACAGGC +
Preference number: 1 (lower is better)
Translates to: VCLLNASFKETSGFL*GEKLSPFHSPFHTG
Trigger: GCCTGTATGAAATGGACTGTGGAAGGGGGATAATTTCTCTCCTCACAGAAAGCCACTCGTCTCCTTGAATGAGGCATTGAGCAGACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 90 bp AATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATaGCTCATTCAAGGAGACGAGTGGCTTTCTGTGAGGAGAGAAATT +
Preference number: 1 (lower is better)
Translates to: NCFLPHDTEKRVSAQ*LIQGDEWLSVRREI
Trigger: AATTTCTCTCCTCACAGAAAGCCACTCGTCTCCTTGAATGAGGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 90 bp AGGTTAAAGCACTGCTTTCCTAAACCAGGGCATCAGGGTGCAATCTaGGGATCTGAATGTTCTCTCTGTCAGGTCACCACAGGTCAAACT +
Preference number: 1 (lower is better)
Translates to: RLKHCFPKPGHQGAI*GSECSLCQVTTGQT
Trigger: AGTTTGACCTGTGGTGACCTGACAGAGAGAACATTCAGATCCTCAGATTGCACCCTGATGCCCTGGTTTAGGAAAGCAGTGCTTTAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CCA 90 bp ACAGAGAAACGTGTGTCTGCTCAATGCCTCATTCAAGGAGACGAGTaGCTTTCTGTGAGGAGAGAAATTATCCCCCTTCCACAGTCCATT +
Preference number: 1 (lower is better)
Translates to: TEKRVSAQCLIQGDE*LSVRREIIPLPQSI
Trigger: AATGGACTGTGGAAGGGGGATAATTTCTCTCCTCACAGAAAGCCACTCGTCTCCTTGAATGAGGCATTGAGCAGACACACGTTTCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 90 bp GTCCTTCCAGTCACTGCTCTAGAAAACATTCCTCCACTCAAACAGTaGTTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACATT +
Preference number: 1 (lower is better)
Translates to: VLPVTALENIPPLKQ*FGPHSFPVKWNMYI
Trigger: AATGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGGAATGTTTTCTAGAGCAGTGACTGGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR CCA 90 bp TTTGCAATATATCAACCAGTGAAGGCATCACATCAGGCTCCGTTCTaGATCTACAGGCTAACAACAGAGGGAAAAGGTCCTCTTCACAAC +
Preference number: 1 (lower is better)
Translates to: FAIYQPVKASHQAPF*IYRLTTEGKGPLHN
Trigger: GTTGTGAAGAGGACCTTTTCCCTCTGTTGTTAGCCTGTAGATCCAGAACGGAGCCTGATGTGATGCCTTCACTGGTTGATATATTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 90 bp CAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTaGTCTAGAAAACATTCCTCCACTCAAACAGTGATTTGGGCCACA +
Preference number: 1 (lower is better)
Translates to: QGIFVLQHHVCPSSH*SRKHSSTQTVIWAT
Trigger: TGTGGCCCAAATCACTGTTTGAGTGGAGGAATGTTTTCTAGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR CCA 90 bp TCCAGTCACTGCTCTAGAAAACATTCCTCCACTCAAACAGTGATTTaGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACATTCTTCT +
Preference number: 1 (lower is better)
Translates to: SSHCSRKHSSTQTVI*ATQLPSQVEYVHSS
Trigger: AGAAGAATGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGGAATGTTTTCTAGAGCAGTGACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR CCA 90 bp TGTGTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTaGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGAT +
Preference number: 1 (lower is better)
Translates to: CVNNLLRVGRANMGT*WVVVIPMVRNIHGD
Trigger: ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 90 bp GCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTaGGAAATATTCATGGTGATTAGTAAGGGAAGACTTTCATATTGT +
Preference number: 1 (lower is better)
Translates to: AGPTWVLGGLWLFLW*EIFMVISKGRLSYC
Trigger: ACAATATGAAAGTCTTCCCTTACTAATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 90 bp ACAAAGTGCTGTGTAAATGTAAGGCATGGGTTTCACATTGAAATCTaGCTCCAAACACAATCTCTTTCTTACGCTTCCTGGAGTCTTTGT +
Preference number: 1 (lower is better)
Translates to: TKCCVNVRHGFHIEI*LQTQSLSYASWSLC
Trigger: ACAAAGACTCCAGGAAGCGTAAGAAAGAGATTGTGTTTGGAGTCAGATTTCAATGTGAAACCCATGCCTTACATTTACACAGCACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR TCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGACCAGAAAAGTGGCTTaGGGCCAAGAGAGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGTRKVA*GQEREA
Trigger: GGCTTCTCTCTCTTGGCCTCAAGCCACTTTTCTGGT...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CAA 90 bp TCCACAGCTCACAGACACTGCAGGACTGGGTATAGGAATTGGCCCTaGGACCCCAGGAAACTACCCCAAATGCATTTCAGAGATGACCCG +
Preference number: 2 (lower is better)
Translates to: STAHRHCRTGYRNWP*DPRKLPQMHFRDDP
Trigger: CGGGTCATCTCTGAAATGCATTTGGGGTAGTTTCCTGGGGTCCAAGGGCCAATTCCTATACCCAGTCCTGCAGTGTCTGTGAGCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR CCA 90 bp AAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATGCCATAGGAATTGGCCCTTaGACCCCAGGAAACTACCCC +
Preference number: 2 (lower is better)
Translates to: KGIASCPTTQRNVCLLNAIGIGP*TPGNYP
Trigger: GGGGTAGTTTCCTGGGGTCCAAGGGCCAATTCCTAT...GGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CAA 90 bp GGGTCATGTGGGAAAGAACTGAGATGTGCTGAAGAGGCAAGGGAATaGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: GSCGKELRCAEEARE*LPAPRHRETCVCSM
Trigger: CATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTTGCCTCTTCAGCACATCTCAGTTCTTTCCCACATGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR TCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGAATGCATTTCAGAGATaGCCCGGTCTCAAGAAATAT +
Preference number: 2 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGNAFQR*PGLKKY
Trigger: ATATTTCTTGAGACCGGGTCATCTCTGAAATGCATT...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR GCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGCTTTGGTCTAAGGTTTaGAGGCATAAATGGCACAAA +
Preference number: 2 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGLWSKV*RHKWHK
Trigger: TTTGTGCCATTTATGCCTGCAAACCTTAGACCAAAG...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR TCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAAGCGTTACGACTGAAATaGGGAGCCCTGGTGTATTCG +
Preference number: 2 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKALRLK*GALVYS
Trigger: CGAATACACCAGGGCTCCTCATTTCAGTCGTAACGC...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTAGCCCCACATCACCGTaGGCTCCCAGTAGGAACACA +
Preference number: 2 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSSPTSP*APSRNT
Trigger: TGTGTTCCTACTGGGAGCTCACGGTGATGTGGGGCT...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGCCCTGGTGTATTCGGTaGTTATCTTCATCTAACGTG +
Preference number: 2 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVPWCIR*LSSSNV
Trigger: CACGTTAGATGAAGATAATCACCGAATACACCAGGG...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCAAGCCCCACATCACCGTaGGCTCCCAGTAGGAACACA +
Preference number: 2 (lower is better)
Translates to: IPKARNFCSATPRLSFQSSPTSP*APSRNT
Trigger: TGTGTTCCTACTGGGAGCTCACGGTGATGTGGGGCT...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCTTCTCTGGAGAGCAATaGACAGAAGAGACATTTCTC +
Preference number: 2 (lower is better)
Translates to: MSGIWNTPPPSALPHATVFSGEQ*TEETFL
Trigger: GAGAAATGTCTCTTCTGTTCATTGCTCTCCAGAGAA...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAAGCATTTCTCATCACATaGAAAAGGCACCACCATTCC +
Preference number: 2 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKAFLIT*KRHHHS
Trigger: GGAATGGTGGTGCCTTTTCCATGTGATGAGAAATGC...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCTGGGAAGCTGATGCTTaGAGGACTGGGTTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCWEADA*RTGFQF
Trigger: AAACTGAAACCCAGTCCTTCAAGCATCAGCTTCCCA...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCATGGATGCGTTACGACTaGAATGAGGAGCCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: IPKARNFCSATPRLSFQSWMRYD*NEEPWC
Trigger: ACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCA...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATCCTCCACTCAAACAGTaGTTTGGGCCACACAGCTTC +
Preference number: 2 (lower is better)
Translates to: MQGSECLFAIYQPVKASHPPLKQ*FGPHSF
Trigger: GAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGG...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR TCA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGCCTCCACTCAAACAGTaGTTTGGGCCACACAGCTTC +
Preference number: 2 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWPPLKQ*FGPHSF
Trigger: GAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGG...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR CAA 90 bp CACATGGAAAAGGCACCACCATTCCATACCAAAGGCAAGGAATTTTaGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: HMEKAPPFHTKGKEF*FCNTTFVLPVTALE
Trigger: TTCTAGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGTGGTGCCTTTTCCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTCCCTGGTGTATTCGGTaGTTATCTTCATCTAACGTG +
Preference number: 2 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSPWCIR*LSSSNV
Trigger: CACGTTAGATGAAGATAATCACCGAATACACCAGGG...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTGCGTTACGACTGAAATaGGGAGCCCTGGTGTATTCG +
Preference number: 2 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFALRLK*GALVYS
Trigger: CGAATACACCAGGGCTCCTCATTTCAGTCGTAACGC...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR CCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAAAACAGAATGTTTCCATaGGCAATTACTCCTGGTAAA +
Preference number: 2 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKNRMFP*AITPGK
Trigger: TTTACCAGGAGTAATTGCCCATGGAAACATTCTGTT...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATTGGGAAGCTGATGCTTaGAGGACTGGGTTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDWEADA*RTGFQF
Trigger: AAACTGAAACCCAGTCCTTCAAGCATCAGCTTCCCA...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTACTCAAACAGTGATTTaGGCCACACAGCTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVTQTVI*ATQLPS
Trigger: ACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGT...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGTGTCCTTTGAATGAGTaGAATATGGAACACGCCTCC +
Preference number: 2 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLCPLNE*NMEHAS
Trigger: GGAGGCGTGTTCCATATTCCACTCATTCAAAGGACA...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATGCTTTTGCAACATCTTaGAGAGTTGCTTGTGATAAA +
Preference number: 2 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDAFATS*RVACDK
Trigger: TTTATCACAAGCAACTCTTCAAGATGTTGCAAAAGC...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGACATGCCACTGTCTATaGAGCATTTCTCATCACATG +
Preference number: 2 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLTCHCL*SISHHM
Trigger: CATGTGATGAGAAATGCTTCATAGACAGTGGCATGT...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTAGCTTCCCAGTCAAGTaGAATATGTACATTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSSFPVK*NMYILL
Trigger: AAGAAGAATGTACATATTCCACTTGACTGGGAAGCT...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATGCATTTCTCATCACATaGAAAAGGCACCACCATTCC +
Preference number: 2 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDAFLIT*KRHHHS
Trigger: GGAATGGTGGTGCCTTTTCCATGTGATGAGAAATGC...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATGTTTCCCTTTCACTTTaGGAAGCTCTGCAAAGTAAG +
Preference number: 2 (lower is better)
Translates to: MQGSECLFAIYQPVKASHVSLSL*EALQSK
Trigger: CTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAAC...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CAA 90 bp GTCTCAAGAAATATACTGAAAGTAATCCAGTTTTCCCAATATTCTTaGGACCAGAAAAGTGGCTTGAGGCCAAGAGAGAGAAGCCCATGT +
Preference number: 2 (lower is better)
Translates to: VSRNILKVIQFSQYS*DQKSGLRPRERSPC
Trigger: ACATGGGCTTCTCTCTCTTGGCCTCAAGCCACTTTTCTGGTCCAAAGAATATTGGGAAAACTGGATTACTTTCAGTATATTTCTTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CAA 90 bp AGCTGTTGTGGCAAAACTAAGAATTCTTTAAAGCAAAAGACGCCCTaGCAATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAG +
Preference number: 2 (lower is better)
Translates to: SCCGKTKNSLKQKTP*QCRAQSVYLQYINQ
Trigger: CTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCATTGCAAGGGCGTCTTTTGCTTTAAAGAATTCTTAGTTTTGCCACAACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR TCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTTTTGCAACATCTTaGAGAGTTGCTTGTGATAAA +
Preference number: 2 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEAFATS*RVACDK
Trigger: TTTATCACAAGCAACTCTTCAAGATGTTGCAAAAGC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
3UTR-3UTR TCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCAGCTTTTGCAACATCTTaGAGAGTTGCTTGTGATAAA +
Preference number: 2 (lower is better)
Translates to: IPKARNFCSATPRLSFQSAFATS*RVACDK
Trigger: TTTATCACAAGCAACTCTTCAAGATGTTGCAAAAGC...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR GCA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTTCAGATCCCCTAACCTaGATAAAGTGTGAAAACACC +
Preference number: 2 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFSDPLT*IKCENT
Trigger: GGTGTTTTCACACTTTATGCAGGTTAGGGGATCTGA...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGAACAGAATGTTTCCATaGGCAATTACTCCTGGTAAA +
Preference number: 2 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLNRMFP*AITPGK
Trigger: TTTACCAGGAGTAATTGCCCATGGAAACATTCTGTT...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATAGCTTCCCAGTCAAGTaGAATATGTACATTCTTCTT +
Preference number: 2 (lower is better)
Translates to: MQGSECLFAIYQPVKASHSFPVK*NMYILL
Trigger: AAGAAGAATGTACATATTCCACTTGACTGGGAAGCT...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR GCA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTTATCTTCATCTAACGTaGATCTTTAGATGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFYLHLT*IFRWEA
Trigger: AGCTTCCCATCTAAAGATGCACGTTAGATGAAGATA...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR GCA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTAAGGAATTTTTGTTCTaGAACACCACGTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFKEFLF*NTTFVL
Trigger: AAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTT...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp GTGAAACCCCAATCCATAGACAGCCCGCCAGCAGGTTaGGGCAGGACCACTAGGAGGAGACTGTGCTCAAGC +
Preference number: 3 (lower is better)
Translates to: VKPQSIDSPPAG*GRTTRRRLCSS
Trigger: GCTTGAGCACAGTCTCCTCCTAGTGGTCCTGCCTCAACCTGCTGGCGGGCTGTCTATGGATTGGGGTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp AAATTAGCCGGGCGTAGTCCCAGCTACTCGGGAGGCTaGGGCAGGAGAATCACTTCAACCAGGGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: KLAGRSPSYSGG*GRRITSTREAE
Trigger: CTCTGCCTCCCTGGTTGAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACGCCCGGCTAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp GCCACCAGGGCCAGCCGTATGCTAAGCCCAGTGCAATaGAACACACGCTCCCAGTCAAACTTCTTGGTTTCC +
Preference number: 3 (lower is better)
Translates to: ATRASRMLSPVQ*NTRSQSNFLVS
Trigger: GGAAACCAAGAAGTTTGACTGGGAGCGTGTGTTTCATTGCACTGGGCTTAGCATACGGCTGGCCCTGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 72 bp CTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATaGCTCATTCAAGGAGACGAGTGGCTTTCTGTGAGG +
Preference number: 3 (lower is better)
Translates to: LPHDTEKRVSAQ*LIQGDEWLSVR
Trigger: CCTCACAGAAAGCCACTCGTCTCCTTGAATGAGGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR CAA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCCACTCAAACAGTGATTaGGGCCACACAGCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: MSGIWNTPPPSALPHATVHSNSD*GHTASQ
Trigger: CTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR GCA 72 bp CATGGTTTTCTCTCTCATTCCACAGCTCACAGACACTaGAGGACTGGGTATAGGAATTGGCCCTTGGACCCC +
Preference number: 3 (lower is better)
Translates to: HGFLSHSTAHRH*RTGYRNWPLDP
Trigger: GGGGTCCAAGGGCCAATTCCTATACCCAGTCCTGCAGTGTCTGTGAGCTGTGGAATGAGAGAGAAAACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 72 bp TTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTaGTCAATGCCTCATTCAAGGAGACGAGTGGCTTTC +
Preference number: 3 (lower is better)
Translates to: LLPAPRHRETCV*SMPHSRRRVAF
Trigger: GAAAGCCACTCGTCTCCTTGAATGAGGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp CACTGCTTTCCTAAACCAGGGCATCAGGGTGCAATCTaGGGATCTGAATGTTCTCTCTGTCAGGTCACCACA +
Preference number: 3 (lower is better)
Translates to: HCFPKPGHQGAI*GSECSLCQVTT
Trigger: TGTGGTGACCTGACAGAGAGAACATTCAGATCCTCAGATTGCACCCTGATGCCCTGGTTTAGGAAAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp AGGTGGAGAAGTACCCACATGTTTGCTGGGCCAAACTaGCTGGCCTGGCCTCTTATCTTAGAGAAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: RWRSTHMFAGPN*LAWPLILEKFL
Trigger: TAGAAACTTCTCTAAGATAAGAGGCCAGGCCAGTCAGTTTGGCCCAGCAAACATGTGGGTACTTCTCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 72 bp AGACGCCCTTGCAATGCAGGGCTCAGAGTGTCTATTTaGAATATATCAACCAGTGAAGGCATCACATCAGGC +
Preference number: 3 (lower is better)
Translates to: RRPCNAGLRVSI*NISTSEGITSG
Trigger: GCCTGATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCATTGCAAGGGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CCA 72 bp TATCAACCAGTGAAGGCATCACATCAGGCTCCGTTCTaGATCTACAGGCTAACAACAGAGGGAAAAGGTCCT +
Preference number: 3 (lower is better)
Translates to: YQPVKASHQAPF*IYRLTTEGKGP
Trigger: AGGACCTTTTCCCTCTGTTGTTAGCCTGTAGATCCAGAACGGAGCCTGATGTGATGCCTTCACTGGTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp GTCACTGCTCTAGAAAACATTCCTCCACTCAAACAGTaGTTTGGGCCACACAGCTTCCCAGTCAAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: VTALENIPPLKQ*FGPHSFPVKWN
Trigger: ATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGGAATGTTTTCTAGAGCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 72 bp CTCAATGCCTCATTCAAGGAGACGAGTGGCTTTCTGTaGGGAGAGAAATTATCCCCCTTCCACAGTCCATTT +
Preference number: 3 (lower is better)
Translates to: LNASFKETSGFL*GEKLSPFHSPF
Trigger: AAATGGACTGTGGAAGGGGGATAATTTCTCTCCTCACAGAAAGCCACTCGTCTCCTTGAATGAGGCATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp TGCATAAAGTGTGAAAACACCAAGCTGTCCTTTGAATaGGTGGAATATGGAACACGCCTCCTCCTTCAGCTC +
Preference number: 3 (lower is better)
Translates to: CIKCENTKLSFE*VEYGTRLLLQL
Trigger: GAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCATTCAAAGGACAGCTTGGTGTTTTCACACTTTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 72 bp AGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTaGAGGCATCACATCAGGCTCCGTTCTGGATCTACA +
Preference number: 3 (lower is better)
Translates to: RAQSVYLQYINQ*RHHIRLRSGST
Trigger: TGTAGATCCAGAACGGAGCCTGATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CCA 72 bp TTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTaGGTTGTGGTTATTCCTATGGTGAGAAATATTCAT +
Preference number: 3 (lower is better)
Translates to: LLRVGRANMGTW*VVVIPMVRNIH
Trigger: ATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CAA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAAGGGAAGACTTTCATATaGTTTCTCTATAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKGKTFI*FLYSSL
Trigger: AAGAGAGCTATAGAGAAACAATATGAAAGTCTTCCC...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 72 bp GGACCCCAGGAAACTACCCCAAATGCATTTCAGAGATaGCCCGGTCTCAAGAAATATACTGAAAGTAATCCA +
Preference number: 3 (lower is better)
Translates to: GPQETTPNAFQR*PGLKKYTESNP
Trigger: TGGATTACTTTCAGTATATTTCTTGAGACCGGGTCATCTCTGAAATGCATTTGGGGTAGTTTCCTGGGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CCA 72 bp TGCTCTAGAAAACATTCCTCCACTCAAACAGTGATTTaGGCCACACAGCTTCCCAGTCAAGTGGAATATGTA +
Preference number: 3 (lower is better)
Translates to: CSRKHSSTQTVI*ATQLPSQVEYV
Trigger: TACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGGAATGTTTTCTAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR CCA 72 bp AATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTaGTGGGTTGTGGTTATTCCTATGGTGAGAAATATT +
Preference number: 3 (lower is better)
Translates to: NLLRVGRANMGT*WVVVIPMVRNI
Trigger: AATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR-3UTR CAA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATGGTGGTTCCTTCCATTaGAATGTCAAGCCACACTTT +
Preference number: 3 (lower is better)
Translates to: MQGSECLFAIYQPVKASHGGSFH*NVKPHF
Trigger: AAAGTGTGGCTTGACATTCAAATGGAAGGAACCACC...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp ATCATTCCAATCTCAATGGATGCGTTACGACTGAAATaGGGAGCCCTGGTGTATTCGGTGATTATCTTCATC +
Preference number: 3 (lower is better)
Translates to: IIPISMDALRLK*GALVYSVIIFI
Trigger: GATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
3UTR GCA 72 bp CTTTCAACTGAACTCAATCATTCCAATCTCAATGGATaGGTTACGACTGAAATGAGGAGCCCTGGTGTATTC +
Preference number: 3 (lower is better)
Translates to: LSTELNHSNLNG*VTTEMRSPGVF
Trigger: GAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAGTTCAGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR GCA 72 bp AAGATTTCCACATTAATATCTTGCCCCCAAACACCATaGAGTGCTAAAAGTCACATTCCCATCATGCAAGCA +
Preference number: 3 (lower is better)
Translates to: KISTLISCPQTP*SAKSHIPIMQA
Trigger: TGCTTGCATGATGGGAATGTGACTTTTAGCACTGCATGGTGTTTGGGGGCAAGATATTAATGTGGAAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR CAA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATAAAGGCAAGGAATTTTaGTTCTGCAACACCACGTTT +
Preference number: 3 (lower is better)
Translates to: MQGSECLFAIYQPVKASHKGKEF*FCNTTF
Trigger: AAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTT...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR CAA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATGGGAAGACTTTCATATaGTTTCTCTATAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: MQGSECLFAIYQPVKASHGKTFI*FLYSSL
Trigger: AAGAGAGCTATAGAGAAACAATATGAAAGTCTTCCC...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp ACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTaGGAAATATTCATGGTGATTAGTAAGGGAAGACTT +
Preference number: 3 (lower is better)
Translates to: TWVLGGLWLFLW*EIFMVISKGRL
Trigger: AAGTCTTCCCTTACTAATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
3UTR TCA 72 bp GCCTTAAGTTTCAATGGTACTAAAGGAGTTTACAGTTaGAAGGCTGGGGAAATATGTCTTCACGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: ALSFNGTKGVYS*KAGEICLHEKP
Trigger: TGGCTTTTCGTGAAGACATATTTCCCCAGCCTTTCAACTGTAAACTCCTTTAGTACCATTGAAACTTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR-3UTR CAA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTAGCAGTAGACATTCTTaGCGGAACATATTCCTATCT +
Preference number: 3 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFSSRHS*RNIFLS
Trigger: AGATAGGAATATGTTCCGCAAAGAATGTCTACTGCT...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 72 bp AGCCAAAGGAAAGCATTCAAAGCTATTCACAAACCCTaGTCAAAAGTGTCTGGAGCTCTTCAATTTAAGAAA +
Preference number: 3 (lower is better)
Translates to: SQRKAFKAIHKP*SKVSGALQFKK
Trigger: TTTCTTAAATTGAAGAGCTCCAGACACTTTTGAGCAGGGTTTGTGAATAGCTTTGAATGCTTTCCTTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR GCA 72 bp ACTAAGAATTCTTTAAAGCAAAAGACGCCCTTGCAATaGAGGGCTCAGAGTGTCTATTTGCAATATATCAAC +
Preference number: 3 (lower is better)
Translates to: TKNSLKQKTPLQ*RAQSVYLQYIN
Trigger: GTTGATATATTGCAAATAGACACTCTGAGCCCTGCATTGCAAGGGCGTCTTTTGCTTTAAAGAATTCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR TCA 72 bp TACTTTAGGAGTCTTTCTAGGCCTTTGATCCTATTCTaGGATTTGAGCTGTTGTGGCAAAACTAAGAATTCT +
Preference number: 3 (lower is better)
Translates to: YFRSLSRPLILF*DLSCCGKTKNS
Trigger: AGAATTCTTAGTTTTGCCACAACAGCTCAAATCTCAGAATAGGATCAAAGGCCTAGAAAGACTCCTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGGCTATACCAGTACAGTaGCGACCCCTTCAGTATCAC +
Preference number: 4 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGAIPVQ*RPLQYH
Trigger: GTGATACTGAAGGGGTCGTCACTGTACTGGTATAGC...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGACGAGTGGCTTTCTGTaGGGAGAGAAATTATCCCCC +
Preference number: 4 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGTSGFL*GEKLSP
Trigger: GGGGGATAATTTCTCTCCTCACAGAAAGCCACTCGT...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGAGAACTGAGATGTGCTaGAGAGGCAAGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGRTEMC*RGKGIA
Trigger: AGCAATTCCCTTGCCTCTTCAGCACATCTCAGTTCT...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGTCAGCAGGGTGTTCATaGCTTTCCACTCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGSAGCS*LSTLCI
Trigger: AATACAGAGAGTGGAAAGTCATGAACACCCTGCTGA...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp AAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATGCCAGCTACTCGGGAGGCTaGGGCAGGAGAATCACTTCA +
Preference number: 4 (lower is better)
Translates to: KGIASCPTTQRNVCLLNASYSGG*GRRITS
Trigger: TGAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGCTATTTTACGGCATTTaGTCTTTCCACGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGLFYGI*SFHEAH
Trigger: GTGTGCCTCGTGGAAAGAGCAAATGCCGTAAAATAG...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp AAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATGCCGCGTTACGACTGAAATaGGGAGCCCTGGTGTATTCG +
Preference number: 4 (lower is better)
Translates to: KGIASCPTTQRNVCLLNAALRLK*GALVYS
Trigger: CGAATACACCAGGGCTCCTCATTTCAGTCGTAACGC...GGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCTGGATGCGTTACGACTaGAATGAGGAGCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVWMRYD*NEEPWC
Trigger: ACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCA...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCACCAGAAAAGTGGCTTaGGGCCAAGAGAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVTRKVA*GQEREA
Trigger: GGCTTCTCTCTCTTGGCCTCAAGCCACTTTTCTGGT...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCACGTTCCACTCAGGCTaGGTGAGGATGAAGATGCCT +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVTFHSG*VRMKMP
Trigger: AGGCATCTTCATCCTCACCCAGCCTGAGTGGAACGT...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCTACCCACATGTTTGCTaGGCCAAACTGACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVYPHVC*AKLTGL
Trigger: CAGGCCAGTCAGTTTGGCCCAGCAAACATGTGGGTA...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGTCCTATTCTGAGATTTaGGCTGTTGTGGCAAAACTA +
Preference number: 4 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGSYSEI*AVVAKL
Trigger: TAGTTTTGCCACAACAGCTCAAATCTCAGAATAGGA...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTCCAGGGCCTTGTGGATaGCTGCCTCTGAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSPGPCG*LPLRVQ
Trigger: CTGTACCCTCAGAGGCAGGCATCCACAAGGCCCTGG...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCCTTGAGTTTTCCTCCTaGGCTTCTGACGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVLEFSS*ASDARE
Trigger: TTCCCTTGCGTCAGAAGCCCAGGAGGAAAACTCAAG...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATGCCTGTATTACAAAACCCTaGGCAGGGCAGTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: KGIASCPTTQRNVCLLNACITKP*AGQSSP
Trigger: GGGAGATGACTGCCCTGCCCAGGGTTTTGTAATACA...GGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGCTATACCAGTACAGTaGCGACCCCTTCAGTATCAC +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVAIPVQ*RPLQYH
Trigger: GTGATACTGAAGGGGTCGTCACTGTACTGGTATAGC...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGCCTTGGCAGTCAGCATaGCCCAGATCTTTACACGAT +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVPWQSA*PRSLHD
Trigger: ATCGTGTAAAGATCTGGGCCATGCTGACTGCCAAGG...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATAGCGTGAGGAGGGGGTaGTGTCTCCGCAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDSVRRG*CLRSYF
Trigger: GAAATAGCTGCGGAGACACCACCCCCTCCTCACGCT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGTTCCTGCTTCATCACTaGGGGCTCCGGGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLFLLHH*GLRARH
Trigger: GTGCCTGGCCCGGAGCCCCCAGTGATGAAGCAGGAA...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGTCCTCCGACTCATCGTaGGAAAACCTTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVSSDSS*ENLEFS
Trigger: GGAAAACTCAAGGTTTTCTCACGATGAGTCGGAGGA...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGTGGGAAGCTGATGCTTaGAGGACTGGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVWEADA*RTGFQF
Trigger: AAACTGAAACCCAGTCCTTCAAGCATCAGCTTCCCA...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATGCCAAGCTGTCCTTTGAATaGGTGGAATATGGAACACGC +
Preference number: 4 (lower is better)
Translates to: KGIASCPTTQRNVCLLNAKLSFE*VEYGTR
Trigger: GCGTGTTCCATATTCCACTCATTCAAAGGACAGCTT...GGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCAAGCTGTCCTTTGAATaGGTGGAATATGGAACACGC +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVKLSFE*VEYGTR
Trigger: GCGTGTTCCATATTCCACTCATTCAAAGGACAGCTT...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGCAGCGGGAGGGGGCTaGAAACACACCAATTTGCAA +
Preference number: 4 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGAAGGG*KHTNLQ
Trigger: TTGCAAATTGGTGTGTTTTCAGCCCCCTCCCGCTGC...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAACCAGGGCCTTGTGGATaGCTGCCTCTGAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEPGPCG*LPLRVQ
Trigger: CTGTACCCTCAGAGGCAGGCATCCACAAGGCCCTGG...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAACGTGTGTCTGCTCAATaGCTCATTCAAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKRVSAQ*LIQGDE
Trigger: CTCGTCTCCTTGAATGAGGCATTGAGCAGACACACG...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGAGCGTGAGGAGGGGGTaGTGTCTCCGCAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTSVRRG*CLRSYF
Trigger: GAAATAGCTGCGGAGACACCACCCCCTCCTCACGCT...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGGGTCATCCAGCAACTaGTTAATCATGGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVGSSSN*LIMARS
Trigger: TGATCTGGCCATGATTAACCAGTTGCTGGATGACCC...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACATGGATGCGTTACGACTaGAATGAGGAGCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: HSNSDLGHTASQSSGICTWMRYD*NEEPWC
Trigger: ACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCA...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCTGGATGCGTTACGACTaGAATGAGGAGCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCWMRYD*NEEPWC
Trigger: ACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCA...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATAGCCCCACATCACCGTaGGCTCCCAGTAGGAACACA +
Preference number: 4 (lower is better)
Translates to: MQGSECLFAIYQPVKASHSPTSP*APSRNT
Trigger: TGTGTTCCTACTGGGAGCTCACGGTGATGTGGGGCT...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGTGCAATCTGAGGATCTaGATGTTCTCTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVCNLRI*MFSLSG
Trigger: ACCTGACAGAGAGAACATTCAGATCCTCAGATTGCA...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGCAGTTCTGTTGCCTTTaGCCAGCAGCCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTQFCCL*PAARLC
Trigger: ACAGAGCCTGGCTGCTGGTCAAAGGCAACAGAACTG...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422970.6
CDS-3UTR CCA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTTTATACAGCCACCCTTaGCAGTCAGCATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGLYSHP*QSAWPR
Trigger: TCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAA...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTACGTTCCACTCAGGCTaGGTGAGGATGAAGATGCCT +
Preference number: 4 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGTFHSG*VRMKMP
Trigger: AGGCATCTTCATCCTCACCCAGCCTGAGTGGAACGT...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATACGTTCCACTCAGGCTaGGTGAGGATGAAGATGCCT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDTFHSG*VRMKMP
Trigger: AGGCATCTTCATCCTCACCCAGCCTGAGTGGAACGT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAAACTCTCTGTATTTCCTaGCTGTCAGCTTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKTLCIS*LSASGH
Trigger: ATGACCCGAAGCTGACAGCCAGGAAATACAGAGAGT...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGTGTCCTTTGAATGAGTaGAATATGGAACACGCCTCC +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVCPLNE*NMEHAS
Trigger: GGAGGCGTGTTCCATATTCCACTCATTCAAAGGACA...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAAGCCAACATGGGTACTTaGTGGGTTGTGGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKANMGT*WVVVIP
Trigger: AGGAATAACCACAACCCACCAAGTACCCATGTTGGC...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTAATCATCTCAGAGCATaGGGCAGCGGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVNHLRA*GSGRGL
Trigger: CAGCCCCCTCCCGCTGCCCCATGCTCTGAGATGATT...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTAGCCCCACATCACCGTaGGCTCCCAGTAGGAACACA +
Preference number: 4 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVSPTSP*APSRNT
Trigger: TGTGTTCCTACTGGGAGCTCACGGTGATGTGGGGCT...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGCCTCCACTCAAACAGTaGTTTGGGCCACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTPPLKQ*FGPHSF
Trigger: GAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGG...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACAAAGACGCCCTTGCAATaGAGGGCTCAGAGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: HSNSDLGHTASQSSGICTKTPLQ*RAQSVY
Trigger: ATAGACACTCTGAGCCCTGCATTGCAAGGGCGTCTT...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATCTTGAGTTTTCCTCCTaGGCTTCTGACGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDLEFSS*ASDARE
Trigger: TTCCCTTGCGTCAGAAGCCCAGGAGGAAAACTCAAG...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATGCCAAAGGTCTTGATCTGTaGATGGCTGATCTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: KGIASCPTTQRNVCLLNAKGLDL*MADLKS
Trigger: GCTTTTAAGATCAGCCATCCACAGATCAAGACCTTT...GGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTAGCGTGAGGAGGGGGTaGTGTCTCCGCAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADASVRRG*CLRSYF
Trigger: GAAATAGCTGCGGAGACACCACCCCCTCCTCACGCT...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACGAATGAGCAGGCAATaGGGCTCCAGAAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: IPKARNFCSATPRLSFQSRMSRQ*GSRKPG
Trigger: ACCTGGCTTTCTGGAGCCCCATTGCCTGCTCATTCG...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTTTCCTCCTGGGCTTCTaGCGCAAGGGAACAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVFLLGF*RKGTRA
Trigger: TGCTCTTGTTCCCTTGCGTCAGAAGCCCAGGAGGAA...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATATCGTGAGAAAACCTTaGGTTTTCCTCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDIVRKP*VFLLGF
Trigger: GAAGCCCAGGAGGAAAACTCAAGGTTTTCTCACGAT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTCCTCCGACTCATCGTaGGAAAACCTTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDSSDSS*ENLEFS
Trigger: GGAAAACTCAAGGTTTTCTCACGATGAGTCGGAGGA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCGCTTTTGCAACATCTTaGAGAGTTGCTTGTGATAAA +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVAFATS*RVACDK
Trigger: TTTATCACAAGCAACTCTTCAAGATGTTGCAAAAGC...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTGGGAAGCTGATGCTTaGAGGACTGGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDWEADA*RTGFQF
Trigger: AAACTGAAACCCAGTCCTTCAAGCATCAGCTTCCCA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGCCTCCACTCAAACAGTaGTTTGGGCCACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLPPLKQ*FGPHSF
Trigger: GAAGCTGTGTGGCCCAAATCACTGTTTGAGTGGAGG...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTCCCACAAGATTTCCTaGGCATTCCTCAGACACAGT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDSHKIS*AFLRHS
Trigger: ACTGTGTCTGAGGAATGCTCAGGAAATCTTGTGGGA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTTTTGCTGGGCCAAACTaGCTGGCCTGGCCTCTTATC +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAFAGPN*LAWPLI
Trigger: GATAAGAGGCCAGGCCAGTCAGTTTGGCCCAGCAAA...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACATGGATCTACGTGTGCTaGGAGATTCTCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HSNSDLGHTASQSSGICTWIYVC*EILHFL
Trigger: AAGGAAGTGGAGAATCTCTCAGCACACGTAGATCCA...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTAGCCGCTGGGAGTCCTaGGACTCAAGTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFSRWES*DSSSCF
Trigger: GAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCT...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTCTAAGCCCAGTGCAATaGAACACACGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPLSPVQ*NTRSQS
Trigger: TGACTGGGAGCGTGTGTTTCATTGCACTGGGCTTAG...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAACTGAGGTCAGGAGTTTaGAACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWELRSGV*NQPGQH
Trigger: ATGTTGCCCAGGCTGGTTTCAAACTCCTGACCTCAG...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGTCCATCAGCTTTCTCTaGCATTTGATTGCTATACCA +
Preference number: 4 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVSISFL*HLIAIP
Trigger: TGGTATAGCAATCAAATGGCAGAGAAAGCTGATGGA...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCAAGCATGCTTTTTCTTaGATTCAGATGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: MSGIWNTPPPSALPHATVKHAFS*IQMLFP
Trigger: TGGAAAGAGCATCTGAATGCAAGAAAAAGCATGCTT...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGAAGTACCCACATGTTTaGTGGGCCAAACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTKYPHV*WAKLTG
Trigger: GCCAGTCAGTTTGGCCCAGCAAACATGTGGGTACTT...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACAACAGCTCACAGACACTaGAGGACTGGGTATAGGAAT +
Preference number: 4 (lower is better)
Translates to: HSNSDLGHTASQSSGICTTAHRH*RTGYRN
Trigger: ATTCCTATACCCAGTCCTGCAGTGTCTGTGAGCTGT...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATACTAGGAGGAGACTGTaGTCAAGCACAGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADTRRRL*SSTERA
Trigger: GGCCCTCTCTGTGCTTGAGCACAGTCTCCTCCTAGT...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTCAGGCTCTGTCCCAGTaGCTTCGTAGGTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPQALSQ*LRRFLV
Trigger: CACAAGAAACCTACGAAGGCACTGGGACAGAGCCTG...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422970.6
CDS-3UTR CCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTTATACAGCCACCCTTaGCAGTCAGCATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPLYSHP*QSAWPR
Trigger: TCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAA...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCTCCAGCAGGCTTATCTaGGACAGTAAGATGGTCATG +
Preference number: 4 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCSSRLI*DSKMVM
Trigger: CATGACCATCTTACTGTCCCAGATAAGCCTGCTGGA...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATGGGTCATCCAGCAACTaGTTAATCATGGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDGSSSN*LIMARS
Trigger: TGATCTGGCCATGATTAACCAGTTGCTGGATGACCC...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTACTCTCTGTATTTCCTaGCTGTCAGCTTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSTLCIS*LSASGH
Trigger: ATGACCCGAAGCTGACAGCCAGGAAATACAGAGAGT...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATGATTTCTTGAGTTCCTaGGGGGTGTCATCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDDFLSS*GVSSVS
Trigger: TGACACTGATGACACCCCCCAGGAACTCAAGAAATC...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAAAACATGGGTACTTGGTaGGTTGTGGTTATTCCTATG +
Preference number: 4 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKNMGTW*VVVIPM
Trigger: CATAGGAATAACCACAACCCACCAAGTACCCATGTT...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATATAGGAATTGGCCCTTaGACCCCAGGAAACTACCCC +
Preference number: 4 (lower is better)
Translates to: MQGSECLFAIYQPVKASHIGIGP*TPGNYP
Trigger: GGGGTAGTTTCCTGGGGTCCAAGGGCCAATTCCTAT...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACACATCAGGCTCCGTTCTaGATCTACAGGCTAACAACA +
Preference number: 4 (lower is better)
Translates to: HSNSDLGHTASQSSGICTHQAPF*IYRLTT
Trigger: TGTTGTTAGCCTGTAGATCCAGAACGGAGCCTGATG...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGGAGGGTACAGGTGAATaGACTTGCACAGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTEGTGE*TCTANV
Trigger: AACGTTTGCTGTGCAAGTTCATTCACCTGTACCCTC...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATCCCTGGTGTATTCGGTaGTTATCTTCATCTAACGTG +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDPWCIR*LSSSNV
Trigger: CACGTTAGATGAAGATAATCACCGAATACACCAGGG...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTGCGTTACGACTGAAATaGGGAGCCCTGGTGTATTCG +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAALRLK*GALVYS
Trigger: CGAATACACCAGGGCTCCTCATTTCAGTCGTAACGC...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTCACCAAGCTGTCCTTTaGATGAGTGGAATATGGAAC +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSHQAVL*MSGIWN
Trigger: GTTCCATATTCCACTCATTCAAAGGACAGCTTGGTG...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCCAATATATCAACCAGTaGAGGCATCACATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCQYINQ*RHHIRL
Trigger: GAGCCTGATGTGATGCCTTCACTGGTTGATATATTG...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAAAGGGAATTGCTTCCTaGCCCACGACACAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEKGIAS*PTTQRN
Trigger: GTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTAAGAGGCAAGGGAATTaGTTCCTGCCCCACGACACA +
Preference number: 4 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVKRQGN*FLPHDT
Trigger: TGTGTCGTGGGGCAGGAAGCAATTCCCTTGCCTCTT...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTGCCCCCAAACACCATaGAGTGCTAAAAGTCACATT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDCPQTP*SAKSHI
Trigger: AATGTGACTTTTAGCACTGCATGGTGTTTGGGGGCA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTTTATACAGCCACCCTTaGCAGTCAGCATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADALYSHP*QSAWPR
Trigger: TCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAA...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCCTCCGCAGCTATTTCTaGATCTTCCTGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCLRSYF*IFLFTF
Trigger: GAAAGTGAACAGGAAGATCCAGAAATAGCTGCGGAG...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATCTCCGCAGCTATTTCTaGATCTTCCTGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDLRSYF*IFLFTF
Trigger: GAAAGTGAACAGGAAGATCCAGAAATAGCTGCGGAG...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTGTCCTTTGAATGAGTaGAATATGGAACACGCCTCC +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDCPLNE*NMEHAS
Trigger: GGAGGCGTGTTCCATATTCCACTCATTCAAAGGACA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGACTGGGTATAGGAATTaGCCCTTGGACCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWTGYRN*PLDPRK
Trigger: TTTCCTGGGGTCCAAGGGCCAATTCCTATACCCAGT...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
3UTR CAA 72 bp CAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTaGGTGGGTTGTGGTTATTCCTATGGTGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: QFVTGRQGQHGY*VGCGYSYGEKY
Trigger: ATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTCAGTTCTGTTGCCTTTaGCATGCAATACAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGQFCCL*HAIQRE
Trigger: CTCTCTTTGTATTGCATGTCAAAGGCAACAGAACTG...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000367220.8
CDS-3UTR TCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAATCGTGAGAAAACCTTaGGTTTTCCTCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEIVRKP*VFLLGF
Trigger: GAAGCCCAGGAGGAAAACTCAAGGTTTTCTCACGAT...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTATACCAGTACAGTaGCGACCCCTTCAGTATCAC +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADAIPVQ*RPLQYH
Trigger: GTGATACTGAAGGGGTCGTCACTGTACTGGTATAGC...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGCTTTCTCTGCCATTTaGTTGCTATACCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGAFSAI*LLYQYS
Trigger: ACTGTACTGGTATAGCAATCAAATGGCAGAGAAAGC...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTTTGTAGTGGATTCCTaGTGGATTACAGCCGATCCA +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTFVVDS*WITADP
Trigger: TGGATCGGCTGTAATCCATCAGGAATCCACTACAAA...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGAGGGTACAGGTGAATaGACTTGCACAGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEEGTGE*TCTANV
Trigger: AACGTTTGCTGTGCAAGTTCATTCACCTGTACCCTC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTTTGTCCATGATCTTTaGTCCAGCAGGCTTATCTGG +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTFVHDL*SSRLIW
Trigger: CCAGATAAGCCTGCTGGATCAAAGATCATGGACAAA...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTTTCTCTGGAGAGCAATaGACAGAAGAGACATTTCTC +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSFSGEQ*TEETFL
Trigger: GAGAAATGTCTCTTCTGTTCATTGCTCTCCAGAGAA...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACAACATGCCACTGTCTATaGAGCATTTCTCATCACATG +
Preference number: 4 (lower is better)
Translates to: HSNSDLGHTASQSSGICTTCHCL*SISHHM
Trigger: CATGTGATGAGAAATGCTTCATAGACAGTGGCATGT...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGCATCAGGGTGCAATCTaGGGATCTGAATGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWHQGAI*GSECSL
Trigger: GAGAGAACATTCAGATCCTCAGATTGCACCCTGATG...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGCCTTTGATCCTATTCTaGGATTTGAGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTPLILF*DLSCCG
Trigger: GCCACAACAGCTCAAATCTCAGAATAGGATCAAAGG...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTCTCTGCCATTTGATTaGTATACCAGTACAGTGACG +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDSLPFD*YTSTVT
Trigger: CGTCACTGTACTGGTATAGCAATCAAATGGCAGAGA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCTCTCTGCCATTTGATTaGTATACCAGTACAGTGACG +
Preference number: 4 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCSLPFD*YTSTVT
Trigger: CGTCACTGTACTGGTATAGCAATCAAATGGCAGAGA...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGAGGAGGAAGGAAAACTaGTGGGTGTCTTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTRRKEN*WVSSLY
Trigger: ATACAGTGAAGACACCCAGCAGTTTTCCTTCCTCCT...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTTCAGATCCCCTAACCTaGATAAAGTGTGAAAACACC +
Preference number: 4 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGSDPLT*IKCENT
Trigger: GGTGTTTTCACACTTTATGCAGGTTAGGGGATCTGA...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTTCAGATCCCCTAACCTaGATAAAGTGTGAAAACACC +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSSDPLT*IKCENT
Trigger: GGTGTTTTCACACTTTATGCAGGTTAGGGGATCTGA...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATCTCCAGAAAGCCAGGTaGAAAATTGTGAAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDLQKAR*KIVKFS
Trigger: ACTGAACTTCACAATTTTGCACCTGGCTTTCTGGAG...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTAGCAAAAGACGCCCTTaGAATGCAGGGCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFSKRRP*NAGLRV
Trigger: CACTCTGAGCCCTGCATTGCAAGGGCGTCTTTTGCT...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATGAGCAGTCTTATTCCTaGATTCAGAAGCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDEQSYS*IQKPHS
Trigger: ACTATGAGGCTTCTGAATCCAGGAATAAGACTGCTC...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000367220.8
CDS-3UTR CCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTCCTTGGCAGTCAGCATaGCCCAGATCTTTACACGAT +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAPWQSA*PRSLHD
Trigger: ATCGTGTAAAGATCTGGGCCATGCTGACTGCCAAGG...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAATCCAGCAGGCTTATCTaGGACAGTAAGATGGTCATG +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWESSRLI*DSKMVM
Trigger: CATGACCATCTTACTGTCCCAGATAAGCCTGCTGGA...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCATCCAGCAGGCTTATCTaGGACAGTAAGATGGTCATG +
Preference number: 4 (lower is better)
Translates to: IPKARNFCSATPRLSFQSSSRLI*DSKMVM
Trigger: CATGACCATCTTACTGTCCCAGATAAGCCTGCTGGA...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGGGTCATCCAGCAACTaGTTAATCATGGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEGSSSN*LIMARS
Trigger: TGATCTGGCCATGATTAACCAGTTGCTGGATGACCC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCAGATTTCTTGAGTTCCTaGGGGGTGTCATCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IPKARNFCSATPRLSFQSDFLSS*GVSSVS
Trigger: TGACACTGATGACACCCCCCAGGAACTCAAGAAATC...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAACTCAAACAGTGATTTaGGCCACACAGCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWETQTVI*ATQLPS
Trigger: ACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGT...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGAGTGGCTTCCCTAGGTaGAGAAGTACCCACATGTTT +
Preference number: 4 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWSGFPR*RSTHMF
Trigger: AAACATGTGGGTACTTCTCCACCTAGGGAAGCCACT...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATACTCTCTCAGTCTCATaGCAAGAAGAAAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDTLSVS*QEESEK
Trigger: CTTCTCACTTTCTTCTTGCCATGAGACTGAGAGAGT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422970.6
CDS-3UTR TCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAATTTGTAGTGGATTCCTaGTGGATTACAGCCGATCCA +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEFVVDS*WITADP
Trigger: TGGATCGGCTGTAATCCATCAGGAATCCACTACAAA...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGAGGGTACAGGTGAATaGACTTGCACAGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADEGTGE*TCTANV
Trigger: AACGTTTGCTGTGCAAGTTCATTCACCTGTACCCTC...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAATCAGCAGGGTGTTCATaGCTTTCCACTCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWESAGCS*LSTLCI
Trigger: AATACAGAGAGTGGAAAGTCATGAACACCCTGCTGA...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTTGGGAAGCTGATGCTTaGAGGACTGGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVWEADA*RTGFQF
Trigger: AAACTGAAACCCAGTCCTTCAAGCATCAGCTTCCCA...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTTCCCACAAGATTTCCTaGGCATTCCTCAGACACAGT +
Preference number: 4 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVSHKIS*AFLRHS
Trigger: ACTGTGTCTGAGGAATGCTCAGGAAATCTTGTGGGA...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTAATGCATTTCAGAGATaGCCCGGTCTCAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSNAFQR*PGLKKY
Trigger: ATATTTCTTGAGACCGGGTCATCTCTGAAATGCATT...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGAGGAGGAAGGAAAACTaGTGGGTGTCTTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLRRKEN*WVSSLY
Trigger: ATACAGTGAAGACACCCAGCAGTTTTCCTTCCTCCT...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCAAGGAGGAAGGAAAACTaGTGGGTGTCTTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: IPKARNFCSATPRLSFQSRRKEN*WVSSLY
Trigger: ATACAGTGAAGACACCCAGCAGTTTTCCTTCCTCCT...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTGGAGATAGACTAGCTTaGTCTAATGATTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSGDRLA*SNDLYS
Trigger: GCTGTACAAATCATTAGAGCAAGCTAGTCTATCTCC...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTCTTTGGTCTAAGGTTTaGAGGCATAAATGGCACAAA +
Preference number: 4 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSLWSKV*RHKWHK
Trigger: TTTGTGCCATTTATGCCTGCAAACCTTAGACCAAAG...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATCTTTGGTCTAAGGTTTaGAGGCATAAATGGCACAAA +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDLWSKV*RHKWHK
Trigger: TTTGTGCCATTTATGCCTGCAAACCTTAGACCAAAG...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGGCTATTCACAAACCCTaGTCAAAAGTGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLAIHKP*SKVSGA
Trigger: AGCTCCAGACACTTTTGAGCAGGGTTTGTGAATAGC...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTAGAGAAACGTGTGTCTaGTCAATGCCTCATTCAAGG +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPRETCV*SMPHSR
Trigger: CCTTGAATGAGGCATTGAGCAGACACACGTTTCTCT...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTCTTGAGTTTTCCTCCTaGGCTTCTGACGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFLEFSS*ASDARE
Trigger: TTCCCTTGCGTCAGAAGCCCAGGAGGAAAACTCAAG...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATAAAGGTCTTGATCTGTaGATGGCTGATCTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDKGLDL*MADLKS
Trigger: GCTTTTAAGATCAGCCATCCACAGATCAAGACCTTT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATAGGAAGGAAAACTGCTaGGTGTCTTCACTGTATTTT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDRKENC*VSSLYF
Trigger: AAAATACAGTGAAGACACCCAGCAGTTTTCCTTCCT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATACTCTCTGTATTTCCTaGCTGTCAGCTTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADTLCIS*LSASGH
Trigger: ATGACCCGAAGCTGACAGCCAGGAAATACAGAGAGT...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATGATTTCTTGAGTTCCTaGGGGGTGTCATCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDDFLSS*GVSSVS
Trigger: TGACACTGATGACACCCCCCAGGAACTCAAGAAATC...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTGCATTTCTCATCACATaGAAAAGGCACCACCATTCC +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPAFLIT*KRHHHS
Trigger: GGAATGGTGGTGCCTTTTCCATGTGATGAGAAATGC...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCATTTCTCATCACATaGAAAAGGCACCACCATTCC +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEAFLIT*KRHHHS
Trigger: GGAATGGTGGTGCCTTTTCCATGTGATGAGAAATGC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAACTTCTTAGTAAAGCTTaGGGAACTATTCAACAACTA +
Preference number: 4 (lower is better)
Translates to: RQGQHGYLVGCGYSYGEKLLSKA*GTIQQL
Trigger: TAGTTGTTGAATAGTTCCCCAAGCTTTACTAAGAAG...TTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTGGCCCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGATTCAAGGAGACGAGTaGCTTTCTGTGAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWIQGDE*LSVRRE
Trigger: TTCTCTCCTCACAGAAAGCCACTCGTCTCCTTGAAT...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGGCTTTCTCTGCCATTTaGTTGCTATACCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLAFSAI*LLYQYS
Trigger: ACTGTACTGGTATAGCAATCAAATGGCAGAGAAAGC...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTTTTGTAGTGGATTCCTaGTGGATTACAGCCGATCCA +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAFVVDS*WITADP
Trigger: TGGATCGGCTGTAATCCATCAGGAATCCACTACAAA...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACAACAGTAAGATGGTCATaGTTGCTACTCAATGAAGAA +
Preference number: 4 (lower is better)
Translates to: HSNSDLGHTASQSSGICTTVRWS*LLLNEE
Trigger: TTCTTCATTGAGTAGCAATCATGACCATCTTACTGT...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATTTTGTCCATGATCTTTaGTCCAGCAGGCTTATCTGG +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADFVHDL*SSRLIW
Trigger: CCAGATAAGCCTGCTGGATCAAAGATCATGGACAAA...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTTCTCTTCTTTGTCCATaGTCTTTGATCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADASLLCP*SLIQQA
Trigger: AGCCTGCTGGATCAAAGATCATGGACAAAGAAGAGA...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATCCCTGGTGTATTCGGTaGTTATCTTCATCTAACGTG +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADPWCIR*LSSSNV
Trigger: CACGTTAGATGAAGATAATCACCGAATACACCAGGG...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTCCCTGGTGTATTCGGTaGTTATCTTCATCTAACGTG +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAPWCIR*LSSSNV
Trigger: CACGTTAGATGAAGATAATCACCGAATACACCAGGG...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATCACCAAGCTGTCCTTTaGATGAGTGGAATATGGAAC +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDHQAVL*MSGIWN
Trigger: GTTCCATATTCCACTCATTCAAAGGACAGCTTGGTG...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGTCGTCTTGTCAATATTaGTCCTGGGAAACCTGGATA +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLSSCQY*SWETWI
Trigger: TATCCAGGTTTCCCAGGATCAATATTGACAAGACGA...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATAAAGGAAACACAGCATaGTTAGGTGAAACCCCAATC +
Preference number: 4 (lower is better)
Translates to: MQGSECLFAIYQPVKASHKGNTA*LGETPI
Trigger: GATTGGGGTTTCACCTAATCATGCTGTGTTTCCTTT...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCTCTGCCATTTGATTaGTATACCAGTACAGTGACG +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPSLPFD*YTSTVT
Trigger: CGTCACTGTACTGGTATAGCAATCAAATGGCAGAGA...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTaGATCTTTAGATGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDYLHLT*IFRWEA
Trigger: AGCTTCCCATCTAAAGATGCACGTTAGATGAAGATA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAATTCCTCAGACACAGTaGAACATCATAACACCAGTG +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEIPQTQ*NIITPV
Trigger: CACTGGTGTTATGATGTTGCACTGTGTCTGAGGAAT...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTATTCCTCAGACACAGTaGAACATCATAACACCAGTG +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPIPQTQ*NIITPV
Trigger: CACTGGTGTTATGATGTTGCACTGTGTCTGAGGAAT...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGTCTTGATCTGTGGATaGCTGATCTTAAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEVLICG*LILKAC
Trigger: GCATGCTTTTAAGATCAGCCATCCACAGATCAAGAC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGGTCTTGATCTGTGGATaGCTGATCTTAAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLVLICG*LILKAC
Trigger: GCATGCTTTTAAGATCAGCCATCCACAGATCAAGAC...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGAAAGGTCTTGATCTGTaGATGGCTGATCTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTKGLDL*MADLKS
Trigger: GCTTTTAAGATCAGCCATCCACAGATCAAGACCTTT...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTACTCAAACAGTGATTTaGGCCACACAGCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFTQTVI*ATQLPS
Trigger: ACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGT...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATAACATGGGTACTTGGTaGGTTGTGGTTATTCCTATG +
Preference number: 4 (lower is better)
Translates to: MQGSECLFAIYQPVKASHNMGTW*VVVIPM
Trigger: CATAGGAATAACCACAACCCACCAAGTACCCATGTT...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTTACAGTTGAAAGGCTaGGGAAATATGTCTTCACGA +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTLQLKG*GNMSSR
Trigger: TCGTGAAGACATATTTCCCCAGCCTTTCAACTGTAA...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCAGTTTCCCTTTCACTTTaGGAAGCTCTGCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: IPKARNFCSATPRLSFQSVSLSL*EALQSK
Trigger: CTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAAC...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCATTTTCTATGTGGTTCTaGGGTCATGTGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: IPKARNFCSATPRLSFQSFSMWF*GHVGKN
Trigger: GTTCTTTCCCACATGACCCCAGAACCACATAGAAAA...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCAATGTTTTCTATGTaGTTCTGGGGTCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPSMFSM*FWGHVG
Trigger: TCCCACATGACCCCAGAACCACATAGAAAACATTGA...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGACAGTAAGATGGTCATaGTTGCTACTCAATGAAGAA +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTTVRWS*LLLNEE
Trigger: TTCTTCATTGAGTAGCAATCATGACCATCTTACTGT...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGAAGAGGAGAAAACCCTaGCTTTGTCTCAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLKRRKP*LCLKWN
Trigger: ATTCCATTTGAGACAAAGTCAGGGTTTTCTCCTCTT...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATTTCTCTGGAGAGCAATaGACAGAAGAGACATTTCTC +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDFSGEQ*TEETFL
Trigger: GAGAAATGTCTCTTCTGTTCATTGCTCTCCAGAGAA...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTACATGCCACTGTCTATaGAGCATTTCTCATCACATG +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADATCHCL*SISHHM
Trigger: CATGTGATGAGAAATGCTTCATAGACAGTGGCATGT...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTTCGTCTTGTCAATATTaGTCCTGGGAAACCTGGATA +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADASSCQY*SWETWI
Trigger: TATCCAGGTTTCCCAGGATCAATATTGACAAGACGA...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGCAGGGCTCAGAGTGTCTATTTGCAATATATCAACCAGTGAAGGCATCACATAAAGGAGTTTACAGTTaGAAGGCTGGGGAAATATGT +
Preference number: 4 (lower is better)
Translates to: MQGSECLFAIYQPVKASHKGVYS*KAGEIC
Trigger: ACATATTTCCCCAGCCTTTCAACTGTAAACTCCTTT...ATGTGATGCCTTCACTGGTTGATATATTGCAAATAGACACTCTGAGCCCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAATCCATCAGCTTTCTCTaGCATTTGATTGCTATACCA +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWESISFL*HLIAIP
Trigger: TGGTATAGCAATCAAATGGCAGAGAAAGCTGATGGA...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGGAGATAGACTAGCTTaGTCTAATGATTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEGDRLA*SNDLYS
Trigger: GCTGTACAAATCATTAGAGCAAGCTAGTCTATCTCC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGGGAGATAGACTAGCTTaGTCTAATGATTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWGDRLA*SNDLYS
Trigger: GCTGTACAAATCATTAGAGCAAGCTAGTCTATCTCC...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCAGTAGACATTCTTTaGGGAACATATTCCTATCTC +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEAVDIL*GTYSYL
Trigger: GAGATAGGAATATGTTCCGCAAAGAATGTCTACTGC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTGAGCAGTCTTATTCCTaGATTCAGAAGCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAEQSYS*IQKPHS
Trigger: ACTATGAGGCTTCTGAATCCAGGAATAAGACTGCTC...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000367220.8
CDS-3UTR CCA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTAGTTATGAATTTTCTTaGTCCAGTTCTGTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGSYEFS*SSSVAF
Trigger: AAAGGCAACAGAACTGGACCAAGAAAATTCATAACT...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCAGTTATGAATTTTCTTaGTCCAGTTCTGTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCSYEFS*SSSVAF
Trigger: AAAGGCAACAGAACTGGACCAAGAAAATTCATAACT...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTTGGAAGTCTACAGGCTaGTGTTGCAAACCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVWKSTG*CCKPKK
Trigger: TTTCTTTGGTTTGCAACACCAGCCTGTAGACTTCCA...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTCAGTTCTGTTGCCTTTaGCATGCAATACAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFQFCCL*HAIQRE
Trigger: CTCTCTTTGTATTGCATGTCAAAGGCAACAGAACTG...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATAAGAGGAGAAAACCCTaGCTTTGTCTCAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADKRRKP*LCLKWN
Trigger: ATTCCATTTGAGACAAAGTCAGGGTTTTCTCCTCTT...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTAAGAGGAGAAAACCCTaGCTTTGTCTCAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAKRRKP*LCLKWN
Trigger: ATTCCATTTGAGACAAAGTCAGGGTTTTCTCCTCTT...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGAAGCATGCTTTTTCTTaGATTCAGATGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWKHAFS*IQMLFP
Trigger: TGGAAAGAGCATCTGAATGCAAGAAAAAGCATGCTT...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTAAGGAATTTTTGTTCTaGAACACCACGTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPKEFLF*NTTFVL
Trigger: AAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTT...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGAAGGAATTTTTGTTCTaGAACACCACGTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLKEFLF*NTTFVL
Trigger: AAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTT...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTCTAATCTTTAGCAGGTaGCACAGATTTGGATCTACG +
Preference number: 4 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFLIFSR*HRFGST
Trigger: CGTAGATCCAAATCTGTGGCACCTGCTAAAGATTAG...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGAGTTATGAATTTTCTTaGTCCAGTTCTGTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTSYEFS*SSSVAF
Trigger: AAAGGCAACAGAACTGGACCAAGAAAATTCATAACT...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTGTCTTGATCTGTGGATaGCTGATCTTAAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFVLICG*LILKAC
Trigger: GCATGCTTTTAAGATCAGCCATCCACAGATCAAGAC...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATAGGAAGGAAAACTGCTaGGTGTCTTCACTGTATTTT +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDRKENC*VSSLYF
Trigger: AAAATACAGTGAAGACACCCAGCAGTTTTCCTTCCT...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAGCCAACATGGGTACTTaGTGGGTTGTGGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIANMGT*WVVVIP
Trigger: AGGAATAACCACAACCCACCAAGTACCCATGTTGGC...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATATTTGGACCAGAAAAGTaGCTTGAGGCCAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIFGPEK*LEAKRE
Trigger: CTCTCTCTTGGCCTCAAGCCACTTTTCTGGTCCAAA...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAACTTTCTTACGCTTCCTaGAGTCTTTGTAATCCTATA +
Preference number: 4 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWELSYAS*SLCNPI
Trigger: TATAGGATTACAAAGACTCCAGGAAGCGTAAGAAAG...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTACAGTAAGATGGTCATaGTTGCTACTCAATGAAGAA +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADATVRWS*LLLNEE
Trigger: TTCTTCATTGAGTAGCAATCATGACCATCTTACTGT...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATATTTGTCCATGATCTTTaGTCCAGCAGGCTTATCTGG +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIFVHDL*SSRLIW
Trigger: CCAGATAAGCCTGCTGGATCAAAGATCATGGACAAA...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATATCAGCAGGGTGTTCATaGCTTTCCACTCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCISAGCS*LSTLCI
Trigger: AATACAGAGAGTGGAAAGTCATGAACACCCTGCTGA...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR TCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATGCTTTTGCAACATCTTaGAGAGTTGCTTGTGATAAA +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDAFATS*RVACDK
Trigger: TTTATCACAAGCAACTCTTCAAGATGTTGCAAAAGC...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATAAGCATGCTTTTTCTTaGATTCAGATGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADKHAFS*IQMLFP
Trigger: TGGAAAGAGCATCTGAATGCAAGAAAAAGCATGCTT...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR GCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATTATCTTCATCTAACGTaGATCTTTAGATGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDYLHLT*IFRWEA
Trigger: AGCTTCCCATCTAAAGATGCACGTTAGATGAAGATA...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTAGGAAGGAAAACTGCTaGGTGTCTTCACTGTATTTT +
Preference number: 4 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFRKENC*VSSLYF
Trigger: AAAATACAGTGAAGACACCCAGCAGTTTTCCTTCCT...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTAACAGAATGTTTCCATaGGCAATTACTCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADANRMFP*AITPGK
Trigger: TTTACCAGGAGTAATTGCCCATGGAAACATTCTGTT...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATAGCTTCCCAGTCAAGTaGAATATGTACATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDSFPVK*NMYILL
Trigger: AAGAAGAATGTACATATTCCACTTGACTGGGAAGCT...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTAGCTTCCCAGTCAAGTaGAATATGTACATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VFGDYLHLTCIFRWEADASFPVK*NMYILL
Trigger: AAGAAGAATGTACATATTCCACTTGACTGGGAAGCT...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATCTCAGAGTGTCTATTTaGAATATATCAACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDLRVSI*NISTSE
Trigger: TTCACTGGTTGATATATTGCAAATAGACACTCTGAG...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp AATTGTGAAGTTCAGTTTCCCTTTCACTTTGGGAAGCTCTGCAAAGTAAGCTTTGAAAACACACCAATTTaGAAACTACAAAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NCEVQFPFHFGKLCKVSFENTPI*KLQSAV
Trigger: CACAGCACTTTGTAGTTTGCAAATTGGTGTGTTTTC...AAAGCTTACTTTGCAGAGCTTCCCAAAGTGAAAGGGAAACTGAACTTCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR TCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAGACTGGAGTGCTACCTaGGTAAATTATCATGATTAC +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIDWSAT*VNYHDY
Trigger: GTAATCATGATAATTTACTCAGGTAGCACTCCAGTC...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR GCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAGCAGTAGACATTCTTTaGGGAACATATTCCTATCTC +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIAVDIL*GTYSYL
Trigger: GAGATAGGAATATGTTCCGCAAAGAATGTCTACTGC...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR GCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAAGACTGAAGAAGAAATaGCCCCTAAAACTATGTGGA +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIRLKKK*PLKLCG
Trigger: TCCACATAGTTTTAGGGGGCATTTCTTCTTCAGTCT...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CCA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTCTTCTTAGTAAAGCTTaGGGAACTATTCAACAACTA +
Preference number: 4 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFLLSKA*GTIQQL
Trigger: TAGTTGTTGAATAGTTCCCCAAGCTTTACTAAGAAG...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CCA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAAACAGAATGTTTCCATaGGCAATTACTCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCINRMFP*AITPGK
Trigger: TTTACCAGGAGTAATTGCCCATGGAAACATTCTGTT...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GGCAGAGAGCCGCTGGGAGTCCTGAGACTCAAGTTCCTGCTTCATCACTGGGGGCATCGTGAGAAAACCTaGAGTTTTCCTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: GREPLGVLRLKFLLHHWGHREKT*SFPPGL
Trigger: AAGCCCAGGAGGAAAACTCAAGGTTTTCTCACGATG...CCCCCAGTGATGAAGCAGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS TCA 90 bp GCCAGGCTCTGTCCCAGTGCCTTCGTAGGTTTCTTGTGGTTCTCATaGGCCCAGTTGATGACTCTGAAACTCCGTCCCAAGGAGCACTCT +
Preference number: 5 (lower is better)
Translates to: ARLCPSAFVGFLWFS*AQLMTLKLRPKEHS
Trigger: AGAGTGCTCCTTGGGACGGAGTTTCAGAGTCATCAACTGGGCTCATGAGAACCACAAGAAACCTACGAAGGCACTGGGACAGAGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422970.6
CDS-3UTR CAA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGCTGTTTTCCAGGGCCTaGTGGATGCCTGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVLFSRA*WMPASE
Trigger: CTCAGAGGCAGGCATCCACAAGGCCCTGGAAAACAG...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp ATGAGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATGCCACTGTCCTTGGTCCAGTTCTGTaGCCTTTGACCAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: MSGIWNTPPPSALPHATVLGPVL*PLTSSQ
Trigger: CTGGCTGCTGGTCAAAGGCAACAGAACTGGACCAAG...GACAGTGGCATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422970.6
CDS CCA 90 bp CTGCTGTGCAGTCAAAGACTGAGTCTGGGAAGCGTGAGGAGGGGGTaGTGTCTCCGCAGCTATTTCTGGATCTTCCTGTTCACTTTCACT +
Preference number: 5 (lower is better)
Translates to: LLCSQRLSLGSVRRG*CLRSYFWIFLFTFT
Trigger: AGTGAAAGTGAACAGGAAGATCCAGAAATAGCTGCGGAGACACCACCCCCTCCTCACGCTTCCCAGACTCAGTCTTTGACTGCACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000484827.1
ENST00000517438.5
ENST00000519091.5
ENST00000519344.5
ENST00000522590.1
CDS-3UTR CAA 90 bp AAGGGAATTGCTTCCTGCCCCACGACACAGAGAAACGTGTGTCTGCTCAATGCCCACTCAAACAGTGATTaGGGCCACACAGCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KGIASCPTTQRNVCLLNAHSNSD*GHTASQ
Trigger: CTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG...GGCATTGAGCAGACACACGTTTCTCTGTGTCGTGGGGCAGGAAGCAATTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS TCA 90 bp AAGCCCGCTGCTGCTGATAGATGTCCTGGATCAGCAGGGTGTTCATaGCTTTCCACTCTCTGTATTTCCTGGCTGTCAGCTTCGGGTCAT +
Preference number: 5 (lower is better)
Translates to: KPAAADRCPGSAGCS*LSTLCISWLSASGH
Trigger: ATGACCCGAAGCTGACAGCCAGGAAATACAGAGAGTGGAAAGTCATGAACACCCTGCTGATCCAGGACATCTATCAGCAGCAGCGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS-3UTR CAA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGGGTTGTGTGAACAATTaGTTACGGGTAGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVGCVNN*LRVGRA
Trigger: GGCCCTGCCTACCCGTAACAAATTGTTCACACAACC...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCCTGTTTTCCAGGGCCTaGTGGATGCCTGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCLFSRA*WMPASE
Trigger: CTCAGAGGCAGGCATCCACAAGGCCCTGGAAAACAG...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS TCA 90 bp TCTGCCGTCCACCTCCTCTTATTAGCATTAAGACAGACAGAAATCTaGTCCCAAGGAAGGCACCCCGGAGAAAAGCCACACTCAACGTAC +
Preference number: 5 (lower is better)
Translates to: SAVHLLLLALRQTEI*SQGRHPGEKPHSTY
Trigger: GTACGTTGAGTGTGGCTTTTCTCCGGGGTGCCTTCCTTGGGATCAGATTTCTGTCTGTCTTAATGCTAATAAGAGGAGGTGGACGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519190.1
CDS GCA 90 bp AATCCTAATGAATTGAAACTGGCAGGATCACTAAACTATCAGTGGTaGACAACTTGTGAAGGGGAGTCTCTGGCTGAGGGAGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: NPNELKLAGSLNYQW*TTCEGESLAEGAGW
Trigger: CCAGCCTGCTCCCTCAGCCAGAGACTCCCCTTCACAAGTTGTGCACCACTGATAGTTTAGTGATCCTGCCAGTTTCAATTCATTAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522590.1
CDS CCA 90 bp CTTCCCTTTTCCTTTTTCTTATACAGCCACCCTTGGCAGTCAGCATaGCCCAGATCTTTACACGATATCCTCCTCCGACTCATCGTGAGA +
Preference number: 5 (lower is better)
Translates to: LPFSFFLYSHPWQSA*PRSLHDILLRLIVR
Trigger: TCTCACGATGAGTCGGAGGAGGATATCGTGTAAAGATCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAAGAAAAAGGAAAAGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000517438.5
ENST00000518162.1
ENST00000519190.1
ENST00000519344.5
ENST00000519405.5
ENST00000520261.1
CDS CCA 90 bp AGGAATCCTAATGAATTGAAACTGGCAGGATCACTAAACTATCAGTaGTGCACAACTTGTGAAGGGGAGTCTCTGGCTGAGGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: RNPNELKLAGSLNYQ*CTTCEGESLAEGAG
Trigger: GCCTGCTCCCTCAGCCAGAGACTCCCCTTCACAAGTTGTGCACCACTGATAGTTTAGTGATCCTGCCAGTTTCAATTCATTAGGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522590.1
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTCTGCAACACCACGTTaGTCCTTCCAGTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDSATPR*SFQSLL
Trigger: GAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGA...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCTCTGCAACACCACGTTaGTCCTTCCAGTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCSATPR*SFQSLL
Trigger: GAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGA...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATGACCAGAAAAGTGGCTaGAGGCCAAGAGAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDDQKSG*RPRERS
Trigger: GCTTCTCTCTCTTGGCCTCAAGCCACTTTTCTGGTC...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTCTGTTTTCCAGGGCCTaGTGGATGCCTGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: VFGDYLHLTCIFRWEADALFSRA*WMPASE
Trigger: CTCAGAGGCAGGCATCCACAAGGCCCTGGAAAACAG...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GTGAACAATTTGTTACGGGTAGGCAGGGCCAACATGGGTACTTGGTGGGTTGTGTTCATCTCTGTGACATaGTTTGTGACTGGAGTGCTA +
Preference number: 5 (lower is better)
Translates to: VNNLLRVGRANMGTWWVVFISVT*FVTGVL
Trigger: TAGCACTCCAGTCACAAACAATGTCACAGAGATGAA...CACAACCCACCAAGTACCCATGTTGGCCCTGCCTACCCGTAACAAATTGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGAAGAGGCAAGGGAATaGCTTCCTGCCCCACGACAC +
Preference number: 5 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADEEARE*LPAPRH
Trigger: GTGTCGTGGGGCAGGAAGCAATTCCCTTGCCTCTTC...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS TCA 90 bp AAGCAACACTGCATAAAGTGTGAAAACACCAAGCTGTCCTTTGAATaGGTGGAATATGGAACACGCCTCCTCCTTCAGCTCTCCCACATG +
Preference number: 5 (lower is better)
Translates to: KQHCIKCENTKLSFE*VEYGTRLLLQLSHM
Trigger: CATGTGGGAGAGCTGAAGGAGGAGGCGTGTTCCATATTCCACTCATTCAAAGGACAGCTTGGTGTTTTCACACTTTATGCAGTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470622.1
CDS CCA 90 bp TTGCTTAGGAAACTTCCCTTTTCCTTTTTCTTATACAGCCACCCTTaGCAGTCAGCATGGCCCAGATCTTTACACGATATCCTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: LLRKLPFSFFLYSHP*QSAWPRSLHDILLR
Trigger: TCGGAGGAGGATATCGTGTAAAGATCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAAGAAAAAGGAAAAGGGAAGTTTCCTAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000517438.5
ENST00000518162.1
ENST00000519190.1
ENST00000519344.5
ENST00000519405.5
ENST00000520261.1
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATCATCGTGAGAAAACCTaGAGTTTTCCTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDHREKT*SFPPGL
Trigger: AAGCCCAGGAGGAAAACTCAAGGTTTTCTCACGATG...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATAGCAAACGTTATTGGTaGTCCCTCATCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDSKRYW*SLIFSS
Trigger: GCTGCTGAAGATGAGGGACAACCAATAACGTTTGCT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATGCACAGCAAACGTTATaGGTTGTCCCTCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDAQQTL*VVPHLQ
Trigger: CTGAAGATGAGGGACAACCAATAACGTTTGCTGTGC...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACAGCACAGCAAACGTTATaGGTTGTCCCTCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: HSNSDLGHTASQSSGICTAQQTL*VVPHLQ
Trigger: CTGAAGATGAGGGACAACCAATAACGTTTGCTGTGC...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp ATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGTGATCCTGAGGTCAGGAGTTaGAAACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: MGTWWVVVIPMVRNIHGDPEVRS*KPAWAT
Trigger: TGTTGCCCAGGCTGGTTTCAAACTCCTGACCTCAGG...ATCACCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTCTTGGTCCAGTTCTGTaGCCTTTGACATGCAATACA +
Preference number: 5 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGLGPVL*PLTCNT
Trigger: TGTATTGCATGTCAAAGGCAACAGAACTGGACCAAG...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000367220.8
CDS-3UTR CAA 90 bp AGCTCAAAGGAAGTAGAGGTCTCCAATTGTGATGAGATGTTTTCTCTAGCTGTTCACTCAAACAGTGATTaGGGCCACACAGCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SSKEVEVSNCDEMFSLAVHSNSD*GHTASQ
Trigger: CTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG...AACAGCTAGAGAAAACATCTCATCACAATTGGAGACCTCTACTTCCTTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGAAGTACCCACATGTTaGCTGGGCCAAACTGACTGG +
Preference number: 5 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADEVPTC*LGQTDW
Trigger: CCAGTCAGTTTGGCCCAGCAAACATGTGGGTACTTC...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS CCA 90 bp CACTCTCTGTATTTCCTGGCTGTCAGCTTCGGGTCATCCAGCAACTaGTTAATCATGGCCAGATCATGTTCTTTACACTTTAATGTGCTA +
Preference number: 5 (lower is better)
Translates to: HSLYFLAVSFGSSSN*LIMARSCSLHFNVL
Trigger: TAGCACATTAAAGTGTAAAGAACATGATCTGGCCATGATTAACCAGTTGCTGGATGACCCGAAGCTGACAGCCAGGAAATACAGAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS-3UTR CAA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAACATCGTGAGAAAACCTaGAGTTTTCCTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEHREKT*SFPPGL
Trigger: AAGCCCAGGAGGAAAACTCAAGGTTTTCTCACGATG...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAAGCAAACGTTATTGGTaGTCCCTCATCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWESKRYW*SLIFSS
Trigger: GCTGCTGAAGATGAGGGACAACCAATAACGTTTGCT...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCACAGCAAACGTTATaGGTTGTCCCTCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWEAQQTL*VVPHLQ
Trigger: CTGAAGATGAGGGACAACCAATAACGTTTGCTGTGC...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTGGTTGTGTGAACAATTaGTTACGGGTAGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFGCVNN*LRVGRA
Trigger: GGCCCTGCCTACCCGTAACAAATTGTTCACACAACC...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS GCA 90 bp TTTTTAGTCGAAGGTCGTCGGTCCCCAAGAGGAGATAGACTAGCTTaGTCTAATGATTTGTACAGCTTCTCCATTTCATCATCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: FLVEGRRSPRGDRLA*SNDLYSFSISSSSD
Trigger: GTCTGAAGATGATGAAATGGAGAAGCTGTACAAATCATTAGAGCAAGCTAGTCTATCTCCTCTTGGGGACCGACGACCTTCGACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATAAAGCATGCTTTTTCTaGCATTCAGATGCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDKACFF*HSDALS
Trigger: GGAAAGAGCATCTGAATGCAAGAAAAAGCATGCTTT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCACTGCTCTAAAGCATGCTTTTTCTaGCATTCAGATGCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: RQGIFVLQHHVCPSSHCSKACFF*HSDALS
Trigger: GGAAAGAGCATCTGAATGCAAGAAAAAGCATGCTTT...AGAGCAGTGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATAGCAAACGTTATTGGTaGTCCCTCATCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADSKRYW*SLIFSS
Trigger: GCTGCTGAAGATGAGGGACAACCAATAACGTTTGCT...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp CACTCAAACAGTGATTTGGGCCACACAGCTTCCCAGTCAAGTGGAATATGTACAGCTTGCTCTAATGATTaGTACAGCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: HSNSDLGHTASQSSGICTACSND*YSFSIS
Trigger: TGAAATGGAGAAGCTGTACAAATCATTAGAGCAAGC...TGTACATATTCCACTTGACTGGGAAGCTGTGTGGCCCAAATCACTGTTTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATAAAGGCAAGGAATTTTaGTTCTGCAACACCACGTTT +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDKGKEF*FCNTTF
Trigger: AAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCATCCTATCTCCTACCATaGAGTAGGAAAGCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: IPKARNFCSATPRLSFQSSYLLP*SRKAQR
Trigger: CCTTTGAGCTTTCCTACTCAATGGTAGGAGATAGGA...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp ACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCAGCAGTAGACATTCTTaGCGGAACATATTCCTATCT +
Preference number: 5 (lower is better)
Translates to: TTEMRSPGVFGDYLHLTCSSRHS*RNIFLS
Trigger: AGATAGGAATATGTTCCGCAAAGAATGTCTACTGCT...GCACGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp ACCATTCCATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTGGCATGGGTTTCACATaGAAATCTGACTCCAAACAC +
Preference number: 5 (lower is better)
Translates to: TIPYQRQGIFVLQHHVCPGMGFT*KSDSKH
Trigger: GTGTTTGGAGTCAGATTTCAATGTGAAACCCATGCC...AGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTATGGAATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAATCTATTTTACGGCATTaGCTCTTTCCACGAGGCACA +
Preference number: 5 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWESILRH*LFPRGT
Trigger: TGTGCCTCGTGGAAAGAGCAAATGCCGTAAAATAGA...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS TCA 90 bp AAATCCATCAGCTTTCTCTGCCATTTGATTGCTATACCAGTACAGTaGCGACCCCTTCAGTATCACCCAGAACTTTTTCCATTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: KSISFLCHLIAIPVQ*RPLQYHPELFPFVA
Trigger: AGCAACAAATGGAAAAAGTTCTGGGTGATACTGAAGGGGTCGTCACTGTACTGGTATAGCAATCAAATGGCAGAGAAAGCTGATGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000517438.5
ENST00000518162.1
ENST00000519190.1
ENST00000519344.5
ENST00000519405.5
CDS-3UTR CAA 90 bp ATACCAAAGGCAAGGAATTTTTGTTCTGCAACACCACGTTTGTCCTTCCAGTCAAGCTTTCTCTGCCATTaGATTGCTATACCAGTACAG +
Preference number: 5 (lower is better)
Translates to: IPKARNFCSATPRLSFQSSFLCH*IAIPVQ
Trigger: CTGTACTGGTATAGCAATCAAATGGCAGAGAAAGCT...TGACTGGAAGGACAAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp AATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATACTTTTGTCTCTTCTTaGTCCATGATCTTTGATCCA +
Preference number: 5 (lower is better)
Translates to: NLNGCVTTEMRSPGVFGDTFVSS*SMIFDP
Trigger: TGGATCAAAGATCATGGACAAAGAAGAGACAAAAGT...ATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTACTTTTGTCTCTTCTTaGTCCATGATCTTTGATCCA +
Preference number: 5 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGTFVSS*SMIFDP
Trigger: TGGATCAAAGATCATGGACAAAGAAGAGACAAAAGT...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGGCTTGCTCTAATGATTaGTACAGCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTACSND*YSFSIS
Trigger: TGAAATGGAGAAGCTGTACAAATCATTAGAGCAAGC...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp CTCAATCATTCCAATCTCAATGGATGCGTTACGACTGAAATGAGGAGCCCTGGTGGGAAGACTTTCATATaGTTTCTCTATAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LNHSNLNGCVTTEMRSPGGKTFI*FLYSSL
Trigger: AAGAGAGCTATAGAGAAACAATATGAAAGTCTTCCC...ACCAGGGCTCCTCATTTCAGTCGTAACGCATCCATTGAGATTGGAATGATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTGGTGGTTCCTTCCATTaGAATGTCAAGCCACACTTT +
Preference number: 5 (lower is better)
Translates to: VFGDYLHLTCIFRWEADAGGSFH*NVKPHF
Trigger: AAAGTGTGGCTTGACATTCAAATGGAAGGAACCACC...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGGTGGTTCCTTCCATTaGAATGTCAAGCCACACTTT +
Preference number: 5 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADGGSFH*NVKPHF
Trigger: AAAGTGTGGCTTGACATTCAAATGGAAGGAACCACC...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GTTACGACTGAAATGAGGAGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTTTTCCCAATATTCTTaGGACCAGAAAAGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: VTTEMRSPGVFGDYLHLTFSQYS*DQKSGL
Trigger: CAAGCCACTTTTCTGGTCCAAAGAATATTGGGAAAA...CGTTAGATGAAGATAATCACCGAATACACCAGGGCTCCTCATTTCAGTCGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAGCAGGTGCCACAGATTaGGATCTACGTGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIAGATD*DLRVLR
Trigger: TCTCAGCACACGTAGATCCAAATCTGTGGCACCTGC...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAAAGCAAAAGACGCCCTaGCAATGCAGGGCTCAGAGT +
Preference number: 5 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCIKQKTP*QCRAQS
Trigger: ACTCTGAGCCCTGCATTGCAAGGGCGTCTTTTGCTT...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp GTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGCTAGCTTTCTCTGCCATTaGATTGCTATACCAGTACAG +
Preference number: 5 (lower is better)
Translates to: VFGDYLHLTCIFRWEADASFLCH*IAIPVQ
Trigger: CTGTACTGGTATAGCAATCAAATGGCAGAGAAAGCT...AGCATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp TTCACACTATGTATAGGGATCACAGCCAAGGACAAGAGCAGTAGACATTCTTTGAAAGCATGCTTTTTCTaGCATTCAGATGCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: FTLCIGITAKDKSSRHSLKACFF*HSDALS
Trigger: GGAAAGAGCATCTGAATGCAAGAAAAAGCATGCTTT...CAAAGAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp CAACATGGGTACTTGGTGGGTTGTGGTTATTCCTATGGTGAGAAATATTCATGGAAAGGCAAGGAATTTTaGTTCTGCAACACCACGTTT +
Preference number: 5 (lower is better)
Translates to: QHGYLVGCGYSYGEKYSWKGKEF*FCNTTF
Trigger: AAACGTGGTGTTGCAGAACAAAAATTCCTTGCCTTT...CCATGAATATTTCTCACCATAGGAATAACCACAACCCACCAAGTACCCATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS-3UTR CAA 90 bp GAGCATTCCTCAGACACAGTGCAACATCATAACACCAGTGAATCAATAGTATTTTCCTATCTCCTACCATaGAGTAGGAAAGCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: EHSSDTVQHHNTSESIVFSYLLP*SRKAQR
Trigger: CCTTTGAGCTTTCCTACTCAATGGTAGGAGATAGGA...AAATACTATTGATTCACTGGTGTTATGATGTTGCACTGTGTCTGAGGAATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS CCA 90 bp CTTGGTGAACATTATGAAGAGATAGTATCCTGGCTCAGAGTTTTGTaGAAGATGAGAGACAACTTACTGCTTTTTCTTGCATTCAGATGC +
Preference number: 5 (lower is better)
Translates to: LGEHYEEIVSWLRVL*KMRDNLLLFLAFRC
Trigger: GCATCTGAATGCAAGAAAAAGCAGTAAGTTGTCTCTCATCTTCCACAAAACTCTGAGCCAGGATACTATCTCTTCATAATGTTCACCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518162.1
CDS-3UTR CAA 90 bp AGCCCTGGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAACTTTTGTCTCTTCTTaGTCCATGATCTTTGATCCA +
Preference number: 5 (lower is better)
Translates to: SPGVFGDYLHLTCIFRWETFVSS*SMIFDP
Trigger: TGGATCAAAGATCATGGACAAAGAAGAGACAAAAGT...TTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACCAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
CDS-3UTR CAA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATACTTGGTCCAGTTCTGTaGCCTTTGACATGCAATACA +
Preference number: 5 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCILGPVL*PLTCNT
Trigger: TGTATTGCATGTCAAAGGCAACAGAACTGGACCAAG...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265198.8
CDS-3UTR CAA 90 bp GGTGTATTCGGTGATTATCTTCATCTAACGTGCATCTTTAGATGGGAAGCTGATGGGAAGACTTTCATATaGTTTCTCTATAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GVFGDYLHLTCIFRWEADGKTFI*FLYSSL
Trigger: AAGAGAGCTATAGAGAAACAATATGAAAGTCTTCCC...ATCAGCTTCCCATCTAAAGATGCACGTTAGATGAAGATAATCACCGAATACACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS CCA 90 bp GTCATCGCTTATTCCATAATGCATGAGCAGAGGTTTATCTCCATCTaGCTATTGCAATTTCAATCCAATTCAGAAAGTTCATATCTAATG +
Preference number: 5 (lower is better)
Translates to: VIAYSIMHEQRFISI*LLQFQSNSESSYLM
Trigger: CATTAGATATGAACTTTCTGAATTGGATTGAAATTGCAATAGCCAGATGGAGATAAACCTCTGCTCATGCATTATGGAATAAGCGATGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522590.1
CDS-3UTR CAA 90 bp CGTCTTGTCAATATTGATCCTGGGAAACCTGGATATAAATTCACACTATGTATAAGCAGTAGACATTCTTaGCGGAACATATTCCTATCT +
Preference number: 5 (lower is better)
Translates to: RLVNIDPGKPGYKFTLCISSRHS*RNIFLS
Trigger: AGATAGGAATATGTTCCGCAAAGAATGTCTACTGCT...TATACATAGTGTGAATTTATATCCAGGTTTCCCAGGATCAATATTGACAAGACG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265198.8
ENST00000422970.6
CDS CCA 72 bp ACTATCAGTGGTGCACAACTTGTGAAGGGGAGTCTCTaGCTGAGGGAGCAGGCTGGGCCAAGTATGTGGAGA +
Preference number: 6 (lower is better)
Translates to: TISGAQLVKGSL*LREQAGPSMWR
Trigger: TCTCCACATACTTGGCCCAGCCTGCTCCCTCAGCCAGAGACTCCCCTTCACAAGTTGTGCACCACTGATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522590.1
CDS CCA 72 bp AGTCAAAGACTGAGTCTGGGAAGCGTGAGGAGGGGGTaGTGTCTCCGCAGCTATTTCTGGATCTTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: SQRLSLGSVRRG*CLRSYFWIFLF
Trigger: GAACAGGAAGATCCAGAAATAGCTGCGGAGACACCACCCCCTCCTCACGCTTCCCAGACTCAGTCTTTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000484827.1
ENST00000517438.5
ENST00000519091.5
ENST00000519344.5
ENST00000522590.1
CDS TCA 72 bp GCCTTGTGGATGCCTGCCTCTGAGGGTACAGGTGAATaGACTTGCACAGCAAACGTTATTGGTTGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: ALWMPASEGTGE*TCTANVIGCPS
Trigger: TGAGGGACAACCAATAACGTTTGCTGTGCAAGTTCATTCACCTGTACCCTCAGAGGCAGGCATCCACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519091.5
ENST00000519344.5
ENST00000522590.1
CDS TCA 72 bp TGTCCCAGTGCCTTCGTAGGTTTCTTGTGGTTCTCATaGGCCCAGTTGATGACTCTGAAACTCCGTCCCAAG +
Preference number: 6 (lower is better)
Translates to: CPSAFVGFLWFS*AQLMTLKLRPK
Trigger: CTTGGGACGGAGTTTCAGAGTCATCAACTGGGCTCATGAGAACCACAAGAAACCTACGAAGGCACTGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422970.6
CDS CCA 72 bp TCCTTTTTCTTATACAGCCACCCTTGGCAGTCAGCATaGCCCAGATCTTTACACGATATCCTCCTCCGACTC +
Preference number: 6 (lower is better)
Translates to: SFFLYSHPWQSA*PRSLHDILLRL
Trigger: GAGTCGGAGGAGGATATCGTGTAAAGATCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAAGAAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000517438.5
ENST00000518162.1
ENST00000519190.1
ENST00000519344.5
ENST00000519405.5
ENST00000520261.1
CDS TCA 72 bp CACCTCCTCTTATTAGCATTAAGACAGACAGAAATCTaGTCCCAAGGAAGGCACCCCGGAGAAAAGCCACAC +
Preference number: 6 (lower is better)
Translates to: HLLLLALRQTEI*SQGRHPGEKPH
Trigger: GTGTGGCTTTTCTCCGGGGTGCCTTCCTTGGGATCAGATTTCTGTCTGTCTTAATGCTAATAAGAGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519190.1
CDS GCA 72 bp GAATTGAAACTGGCAGGATCACTAAACTATCAGTGGTaGACAACTTGTGAAGGGGAGTCTCTGGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: ELKLAGSLNYQW*TTCEGESLAEG
Trigger: TCCCTCAGCCAGAGACTCCCCTTCACAAGTTGTGCACCACTGATAGTTTAGTGATCCTGCCAGTTTCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522590.1
CDS TCA 72 bp ATAAGAGGCAGAAACAAATGGCCAATTCGGGGCTCCTaGCCTCAAAGAGCATCCAATATGCAGGAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: IRGRNKWPIRGS*PQRASNMQEED
Trigger: GTCTTCTTCCTGCATATTGGATGCTCTTTGAGGTCAGGAGCCCCGAATTGGCCATTTGTTTCTGCCTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522590.1
CDS CAA 72 bp TGGATTCAGAAGCCTCATAGTACTCTGAGGCCAAGCTaGAGGATTCTACTTAAAGCAGCCTCAGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: WIQKPHSTLRPS*RILLKAASALE
Trigger: TTCCAGAGCTGAGGCTGCTTTAAGTAGAATCCTCAAGCTTGGCCTCAGAGTACTATGAGGCTTCTGAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520261.1
CDS TCA 72 bp TGTCCCAGTGCCTTCGTAGGTTTCTTGTGGTTCTCATaGGCCCAGTTGATGACTATGCAATACAAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: CPSAFVGFLWFS*AQLMTMQYKES
Trigger: ACTCTCTTTGTATTGCATAGTCATCAACTGGGCTCATGAGAACCACAAGAAACCTACGAAGGCACTGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520261.1
CDS GCA 72 bp GAAGGTCGTCGGTCCCCAAGAGGAGATAGACTAGCTTaGTCTAATGATTTGTACAGCTTCTCCATTTCATCA +
Preference number: 6 (lower is better)
Translates to: EGRRSPRGDRLA*SNDLYSFSISS
Trigger: TGATGAAATGGAGAAGCTGTACAAATCATTAGAGCAAGCTAGTCTATCTCCTCTTGGGGACCGACGACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS CAA 90 bp GGTCGTCGGTCCCCAAGAGGAGATAGACTAGCTTGCTCTAATGATTaGTACAGCTTCTCCATTTCATCATCTTCAGACACTTTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: GRRSPRGDRLACSND*YSFSISSSSDTFVS
Trigger: AGAGACAAAAGTGTCTGAAGATGATGAAATGGAGAAGCTGTACAAATCATTAGAGCAAGCTAGTCTATCTCCTCTTGGGGACCGACGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS TCA 72 bp AGCTTTCTCTGCCATTTGATTGCTATACCAGTACAGTaGCGACCCCTTCAGTATCACCCAGAACTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: SFLCHLIAIPVQ*RPLQYHPELFP
Trigger: TGGAAAAAGTTCTGGGTGATACTGAAGGGGTCGTCACTGTACTGGTATAGCAATCAAATGGCAGAGAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000517438.5
ENST00000518162.1
ENST00000519190.1
ENST00000519344.5
ENST00000519405.5
CDS CCA 72 bp AAACTTCCCTTTTCCTTTTTCTTATACAGCCACCCTTaGCAGTCAGCATGGCCCAGATCTTTACACGATATC +
Preference number: 6 (lower is better)
Translates to: KLPFSFFLYSHP*QSAWPRSLHDI
Trigger: GATATCGTGTAAAGATCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAAGAAAAAGGAAAAGGGAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000517438.5
ENST00000518162.1
ENST00000519190.1
ENST00000519344.5
ENST00000519405.5
ENST00000520261.1
CDS CCA 72 bp TATTTCCTGGCTGTCAGCTTCGGGTCATCCAGCAACTaGTTAATCATGGCCAGATCATGTTCTTTACACTTT +
Preference number: 6 (lower is better)
Translates to: YFLAVSFGSSSN*LIMARSCSLHF
Trigger: AAAGTGTAAAGAACATGATCTGGCCATGATTAACCAGTTGCTGGATGACCCGAAGCTGACAGCCAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS TCA 72 bp TTCAGACACTTTTGTCTCTTCTTTGTCCATGATCTTTaGTCCAGCAGGCTTATCTGGGACAGTAAGATGGTC +
Preference number: 6 (lower is better)
Translates to: FRHFCLFFVHDL*SSRLIWDSKMV
Trigger: GACCATCTTACTGTCCCAGATAAGCCTGCTGGATCAAAGATCATGGACAAAGAAGAGACAAAAGTGTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS TCA 72 bp GATCCAGCAGGCTTATCTGGGACAGTAAGATGGTCATaGTTGCTACTCAATGAAGAAGTATCATCACTAGAT +
Preference number: 6 (lower is better)
Translates to: DPAGLSGTVRWS*LLLNEEVSSLD
Trigger: ATCTAGTGATGATACTTCTTCATTGAGTAGCAATCATGACCATCTTACTGTCCCAGATAAGCCTGCTGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS CAA 72 bp TCCCCAAGAGGAGATAGACTAGCTTGCTCTAATGATTaGTACAGCTTCTCCATTTCATCATCTTCAGACACT +
Preference number: 6 (lower is better)
Translates to: SPRGDRLACSND*YSFSISSSSDT
Trigger: AGTGTCTGAAGATGATGAAATGGAGAAGCTGTACAAATCATTAGAGCAAGCTAGTCTATCTCCTCTTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265198.8
ENST00000367220.8
ENST00000422970.6
ENST00000519344.5
ENST00000522590.1
CDS CAA 90 bp TCCCTTGGTGAACATTATGAAGAGATAGTATCCTGGCTCAGAGTTTaGTGGAAGATGAGAGACAACTTACTGCTTTTTCTTGCATTCAGA +
Preference number: 6 (lower is better)
Translates to: SLGEHYEEIVSWLRV*WKMRDNLLLFLAFR
Trigger: TCTGAATGCAAGAAAAAGCAGTAAGTTGTCTCTCATCTTCCACAAAACTCTGAGCCAGGATACTATCTCTTCATAATGTTCACCAAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518162.1
CDS CCA 72 bp ATATCCCTTGGTGAACATTATGAAGAGATAGTATCCTaGCTCAGAGTTTTGTGGAAGATGAGAGACAACTTA +
Preference number: 6 (lower is better)
Translates to: ISLGEHYEEIVS*LRVLWKMRDNL
Trigger: TAAGTTGTCTCTCATCTTCCACAAAACTCTGAGCCAGGATACTATCTCTTCATAATGTTCACCAAGGGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518162.1
CDS CAA 90 bp ACAAAATCAGTGGTGATTAATTTTGATTGTAGGAATCCTAATGAATaGAAACTGGCAGGATCACTAAACTATCAGTGGTGCACAACTTGT +
Preference number: 6 (lower is better)
Translates to: TKSVVINFDCRNPNE*KLAGSLNYQWCTTC
Trigger: ACAAGTTGTGCACCACTGATAGTTTAGTGATCCTGCCAGTTTCAATTCATTAGGATTCCTACAATCAAAATTAATCACCACTGATTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522590.1