RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IP6K3 (Homo sapiens)

Ensembl gene IDs: ENSG00000161896

Ensembl transcript IDs: ENST00000293756.5, ENST00000451316.6, ENST00000634274.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAAATATTCCAGAATGTCAGCAATGCTGGCCTCTAACTTGGGCTaGCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTG +
Preference number: 1 (lower is better)
Translates to: CKYSRMSAMLASNLG*PLQCTPEGATLSWL
Trigger: CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCATTGCTGACATTCTGGAATATTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
3UTR TCA 90 bp TGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATaGGCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCC +
Preference number: 1 (lower is better)
Translates to: CTPEGATLSWLSVLR*AALEHNARGCGITS
Trigger: GGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
3UTR GCA 90 bp TCACCTAAAACTCCGCTTAGGAAGATAAGAGGCATTCATGAGCTCTaGCTGCCCTTGGAGCGAGCAGTCCATACAAGGAGAAAAACCATG +
Preference number: 1 (lower is better)
Translates to: SPKTPLRKIRGIHEL*LPLERAVHTRRKTM
Trigger: CATGGTTTTTCTCCTTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAATGCCTCTTATCTTCCTAAGCGGAGTTTTAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR CCA 90 bp TCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATaGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTAAGAGAT +
Preference number: 1 (lower is better)
Translates to: SPPLQAASHGQNVAE*GTPKSAKRFLILRD
Trigger: ATCTCTTAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR GCA 90 bp CGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATGGGGAGCCTCTAACTTGGGCTaGCCCCTCCAGTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: RSPPLQAASHGQNVAEWGASNLG*PLQCTP
Trigger: TGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC...TCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR CCA 90 bp CGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATGGGGACATCTAAGGGGTGTCTaGACTACCCTAGCAACCAAC +
Preference number: 2 (lower is better)
Translates to: RSPPLQAASHGQNVAEWGHLRGV*TTLATN
Trigger: GTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATG...TCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR GCA 90 bp TTACACTTGTCCACCAGTCTTGTAAACATTGCCCCTGGTTTCCTCCGTCCTCCATTCATGAGCTCTGCCTaGCCTTGGAGCGAGCAGTCC +
Preference number: 2 (lower is better)
Translates to: LHLSTSLVNIAPGFLRPPFMSSA*PWSEQS
Trigger: GGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAA...TGGAGGACGGAGGAAACCAGGGGCAATGTTTACAAGACTGGTGGACAAGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR GCA 90 bp TTACACTTGTCCACCAGTCTTGTAAACATTGCCCCTGGTTTCCTCCGTCCTCCAGGCATTCATGAGCTCTaGCTGCCCTTGGAGCGAGCA +
Preference number: 2 (lower is better)
Translates to: LHLSTSLVNIAPGFLRPPGIHEL*LPLERA
Trigger: TGCTCGCTCCAAGGGCAGGCAGAGCTCATGAATGCC...TGGAGGACGGAGGAAACCAGGGGCAATGTTTACAAGACTGGTGGACAAGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR GCA 90 bp CAAGGCTGCTTCAAGTCAAGTTTTCTGCCTCACAGCTTGTGCGGACTGCAGCATGTGTACTCCAGAAGGTaGCACTTTATCCTGGCTGTC +
Preference number: 2 (lower is better)
Translates to: QGCFKSSFLPHSLCGLQHVYSRR*HFILAV
Trigger: GACAGCCAGGATAAAGTGGCACCTTCTGGAGTACAC...ATGCTGCAGTCCGCACAAGCTGTGAGGCAGAAAACTTGACTTGAAGCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR GCA 90 bp TTACACTTGTCCACCAGTCTTGTAAACATTGCCCCTGGTTTCCTCCGTCCTCCATGGTCCCTTTTTATGTaGGTTCACCCCCACTGCAAG +
Preference number: 2 (lower is better)
Translates to: LHLSTSLVNIAPGFLRPPWSLFM*VHPHCK
Trigger: CTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCA...TGGAGGACGGAGGAAACCAGGGGCAATGTTTACAAGACTGGTGGACAAGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR CAA 90 bp TTTAGATGCAAATATTCCAGAATGTCAGCAATGCTGGCCTCTAACTaGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCC +
Preference number: 2 (lower is better)
Translates to: FRCKYSRMSAMLASN*GCPLQCTPEGATLS
Trigger: GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCATTGCTGACATTCTGGAATATTTGCATCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR CCA 90 bp AATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTAAGAGAATGTCAGCAATGCTaGCCTCTAACTTGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: NVAEWGTPKSAKRFLILRECQQC*PLTWAA
Trigger: GGCAGCCCAAGTTAGAGGCCAGCATTGCTGACATTC...TCTTAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR CCA 90 bp AATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTAAGAGCAGAGCAGATGAGATaGGTAGATCTCTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: NVAEWGTPKSAKRFLILRAEQMR*VDLFCF
Trigger: GAAGCAGAAGAGATCTACCCATCTCATCTGCTCTGC...TCTTAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR GCA 72 bp GAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTaGGTTCACCCCCACTGCAAGCCGCGTCTCATGGTC +
Preference number: 3 (lower is better)
Translates to: ESRAGRQWSLFM*VHPHCKPRLMV
Trigger: GACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR-3UTR CAA 90 bp CCTGTAAAGGGACCCTCCTTTCCACAGGCAAAAATGGAGAATCTGGGGTCTTGCTTTCTGCCTCACAGCTaGTGCGGACTGCAGCATGGC +
Preference number: 3 (lower is better)
Translates to: PVKGPSFPQAKMENLGSCFLPHS*CGLQHG
Trigger: GCCATGCTGCAGTCCGCACAAGCTGTGAGGCAGAAA...GCAAGACCCCAGATTCTCCATTTTTGCCTGTGGAAAGGAGGGTCCCTTTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR GCA 72 bp TCCAGAATGTCAGCAATGCTGGCCTCTAACTTGGGCTaGCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTA +
Preference number: 3 (lower is better)
Translates to: SRMSAMLASNLG*PLQCTPEGATL
Trigger: TAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCATTGCTGACATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
3UTR GCA 72 bp CGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCCACTaGAAGCCGCGTCTCATGGTCAGAATGTGGCAGAAT +
Preference number: 3 (lower is better)
Translates to: RQWSLFMCVHPH*KPRLMVRMWQN
Trigger: ATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCACTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR CCA 72 bp TTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATaGTCAGAATGTGGCAGAATGGGGAACTCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: LCAFTPTASRVS*SECGRMGNSKV
Trigger: GACTTTGGAGTTCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR GCA 72 bp ACTCCGCTTAGGAAGATAAGAGGCATTCATGAGCTCTaGCTGCCCTTGGAGCGAGCAGTCCATACAAGGAGA +
Preference number: 3 (lower is better)
Translates to: TPLRKIRGIHEL*LPLERAVHTRR
Trigger: TCTCCTTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAATGCCTCTTATCTTCCTAAGCGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR TCA 72 bp GAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATaGGCAGCATTAGAGCATAATGCCAGGGGATGTGGA +
Preference number: 3 (lower is better)
Translates to: EGATLSWLSVLR*AALEHNARGCG
Trigger: TCCACATCCCCTGGCATTATGCTCTAATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
3UTR-3UTR CAA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATCCAACAGGTCTCTATTaGAGATCTATAGCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDPTGLY*RSIAQK
Trigger: CTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGG...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
3UTR CCA 72 bp CTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATaGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATT +
Preference number: 3 (lower is better)
Translates to: LQAASHGQNVAE*GTPKSAKRFLI
Trigger: AATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
3UTR TCA 72 bp ATTTATTTCCCTAATTGGGTAACGTATCTCAGTGCTTaGCTCAAGGGCATCGTAATAGGTTTCCATACTGCA +
Preference number: 3 (lower is better)
Translates to: IYFPNWVTYLSA*LKGIVIGFHTA
Trigger: TGCAGTATGGAAACCTATTACGATGCCCTTGAGTCAAGCACTGAGATACGTTACCCAATTAGGGAAATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp CAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCCGGGCTCTCCTTGGGTaGGCGTGCCAGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: QDVSGPFLCAFTPTASRVRALLG*ACQLGM
Trigger: CATGCCCAGCTGGCACGCTCACCCAAGGAGAGCCCG...GACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTCTCCAGCTGCACGCCTaGCCTCATGTCCCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPLQLHA*PHVPGV
Trigger: GACGCCGGGGACATGAGGGCAGGCGTGCAGCTGGAG...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TGCTGGCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTGGGCCTGGTGGCATTaGAGGCCCCACGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CWPLTWAAPSSVLQKVPLWAWWH*RPHGLK
Trigger: CTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCA...AAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATGGGGATGCCATTGCTGCCGGTaGTCTGCTGGAGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSPPLQAASHGQNVAEWGCHCCR*SAGASA
Trigger: GGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCA...TCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGCGGGCTCTCCTTGGGTaGGCGTGCCAGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMRALLG*ACQLGM
Trigger: CATGCCCAGCTGGCACGCTCACCCAAGGAGAGCCCG...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAAGGAGCGTCTGCCATATaGCCACCGCCGCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: YVRSPPLQAASHGQNVAEGASAI*PPPPTL
Trigger: CAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCC...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGGAGGGCCCGGAGCTaGTGCAGGATGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMRRARS*CRMGSR
Trigger: CCTGGAGCCCATCCTGCACCAGCTCCGGGCCCTCCT...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp GCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCAGAAGGCTGGAGTGTTaGGGTGGGGCTCGGACCTCA +
Preference number: 4 (lower is better)
Translates to: ASNLGCPLQCTPEGATLSRRLEC*GGARTS
Trigger: TGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCT...GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGGTCTGCTGGAGCGTCTaGCATATGGCCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMVCWSV*HMATAA
Trigger: GGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGAC...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCGATGCATCATCGCCGTaGTGCCGGGTCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ASNLGCPLQCTPEGATLSDASSP*CRVPIF
Trigger: GAAGATGGGGACCCGGCAGCACGGCGATGATGCATC...GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATCCTGCATGCCGCAGATaGGCACACCCAGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDPACRR*AHPGRL
Trigger: CAGCCTGCCTGGGTGTGCGCATCTGCGGCATGCAGG...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAAGGCAGATGGTGGTGGTaGGGGGTCCCTGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: YVRSPPLQAASHGQNVAEGRWWW*GVPAQS
Trigger: AGACTGTGCAGGGACCCCCCACCACCACCATCTGCC...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGTGGGCATGCGGCCACTaGGCAAGGGTGCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMWACGH*ARVQSL
Trigger: CAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCA...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGTGGCCGGGCTCTCCTTaGGTGAGCGTGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDEWPGSP*VSVPAG
Trigger: CCCAGCTGGCACGCTCACCCAAGGAGAGCCCGGCCA...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGAGGAGGGCCCGGAGCTaGTGCAGGATGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDERRARS*CRMGSR
Trigger: CCTGGAGCCCATCCTGCACCAGCTCCGGGCCCTCCT...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGCCGGGAGAGCTACCGTaGGCTGCCTGGGGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AALEHNARGCGITSRADLPGELP*AAWGAS
Trigger: CGAGGCTCCCCAGGCAGCCCACGGTAGCTCTCCCGG...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTCTCCAGCTGCACGCCTaGCCTCATGTCCCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAALQLHA*PHVPGV
Trigger: GACGCCGGGGACATGAGGGCAGGCGTGCAGCTGGAG...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCGGGAGACGAGGGGCTTaGACACCGTATGCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: ASNLGCPLQCTPEGATLSGRRGA*TPYARH
Trigger: ATGACGAGCATACGGTGTGCAAGCCCCTCGTCTCCC...GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTTGCTGCCGGTGGTCTaGTGGAGCGTCTGCCATATG +
Preference number: 4 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLLLPVV*WSVCHM
Trigger: CATATGGCAGACGCTCCAGCAGACCACCGGCAGCAA...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTCAAGGGTGCAGTCGCTaGCATTGCTGCCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPQGCSR*HCCRWS
Trigger: AGACCACCGGCAGCAATGGCAGCGACTGCACCCTTG...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GGGACCCTCCTTTCCACAGGCAAAAATGGAGAATCTGGGGTCTTGCTTTGCCAGTGGGCCTGGTGGCATTaGAGGCCCCACGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GTLLSTGKNGESGVLLCQWAWWH*RPHGLK
Trigger: CTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCA...CTGGCAAAGCAAGACCCCAGATTCTCCATTTTTGCCTGTGGAAAGGAGGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATGGGGACTTTGCCAGAGCTCATaGCTGGGCTTGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: RSPPLQAASHGQNVAEWGLCQSS*LGLALS
Trigger: GGACAAAGCCAAGCCCAGGCATGAGCTCTGGCAAAG...TCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGCTGCCGGTGGTCTGCTaGAGCGTCTGCCATATGGCC +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMLPVVC*SVCHMA
Trigger: GGCCATATGGCAGACGCTCCAGCAGACCACCGGCAG...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTACCTCAGAAGAGCCTTaGCCGGGCTCTCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPTSEEP*PGSPWV
Trigger: CACCCAAGGAGAGCCCGGCCAAGGCTCTTCTGAGGT...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTCACCAGCGAGAAGGCTaGAGTGTTGAGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPHQREG*SVEVGL
Trigger: GAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTG...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGAGGAAGGGCTCCAGCTaGACGCCTGCCCTCATGTCC +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDERKGSS*TPALMS
Trigger: GGACATGAGGGCAGGCGTGCAGCTGGAGCCCTTCCT...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TTCATGAGCTCTGCCTGCCCTTGGAGCGAGCAGTCCATACAAGGAGAAAAACCAAGTCGCTGCCATTGCTaGCGGTGGTCTGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: FMSSACPWSEQSIQGEKPSRCHC*RWSAGA
Trigger: CGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACT...TGGTTTTTCTCCTTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp AAAGCAGAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCGCCACTGGGCAAGGGTaGAGTCGCTGCCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: KAESRAGRQWSLFMCVHPATGQG*SRCHCC
Trigger: GCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGC...GGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTCTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCGAGAATCTGGGGTCTTaGTTTGCCAGAGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: QDVSGPFLCAFTPTASRVENLGS*FARAHA
Trigger: GGCATGAGCTCTGGCAAAGCAAGACCCCAGATTCTC...GACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTTGGCCCGTCCCAGCGTaGAGCATTTGCTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPWPVPA*SICCSP
Trigger: TGGTGAACAGCAAATGCTCCACGCTGGGACGGGCCA...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGACAGGCATCAGGCAATaGCCCGTCCCAGCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDETGIRQ*PVPAWS
Trigger: GCTCCACGCTGGGACGGGCCATTGCCTGATGCCTGT...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGCTTCCTCCGAGATCGTaGGGAGTGTATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLLPPRS*GVYGRQ
Trigger: CTGCCTTCCATACACTCCCCACGATCTCGGAGGAAG...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTTTGTCCTCCTGTCTGTaGGTTCTCAGCGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPLSSCL*VLSGVL
Trigger: GAGGACCCCGCTGAGAACCCACAGACAGGAGGACAA...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGACCTTGAAGGGCTCCTaGCTCTCCTTCACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLTLKGS*LSFTGL
Trigger: CAACCCAGTGAAGGAGAGCCAGGAGCCCTTCAAGGT...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GTGTCACCTAAAACTCCGCTTAGGAAGATAAGAGGCATTCATGAGCTCTGCCTGGGTGAGCGTGCCAGCTaGGCATGCGGCCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: VSPKTPLRKIRGIHELCLGERAS*ACGHWA
Trigger: TGCCCAGTGGCCGCATGCCCAGCTGGCACGCTCACC...CAGGCAGAGCTCATGAATGCCTCTTATCTTCCTAAGCGGAGTTTTAGGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTCACAGGCGGGTCAGGTaGGCCTGGTGGCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAAHRRVR*AWWHCR
Trigger: CCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTG...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGCACACTTCCTCATGTaGCGGGCCTTCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPAHFLM*RAFFSS
Trigger: GGAGGAGAAGAAGGCCCGCCACATGAGGAAGTGTGC...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATCTTTGTACTGTGGGGTaGACCGCTTCATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDLCTVG*TASWPA
Trigger: CGCTGGCCATGAAGCGGTTCACCCCACAGTACAAAG...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGGATAAGAGGCATTCATaGGCTCTGCCTGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLDKRHS*ALPALG
Trigger: TCCAAGGGCAGGCAGAGCTCATGAATGCCTCTTATC...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTAGGAAGGGCTCCAGCTaGACGCCTGCCCTCATGTCC +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCRKGSS*TPALMS
Trigger: GGACATGAGGGCAGGCGTGCAGCTGGAGCCCTTCCT...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGTTGCTGCCGGTGGTCTaGTGGAGCGTCTGCCATATG +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMLLPVV*WSVCHM
Trigger: CATATGGCAGACGCTCCAGCAGACCACCGGCAGCAA...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGCGTGAGGATGCGGGCTaGCTGGGGCTCTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AALEHNARGCGITSRADLREDAG*LGLFLV
Trigger: CACCAGAAAGAGCCCCAGGCAGCCCGCATCCTCACG...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCCCAGAATGTCAGCAATaGTGGCCTCTAACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QDVSGPFLCAFTPTASRVPECQQ*WPLTWA
Trigger: AGCCCAAGTTAGAGGCCAGCATTGCTGACATTCTGG...GACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp AGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTAGAGCAACAGGCATCAGGCAATaGCCCGTCCCAGCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RRCHFILAVCSPMSSIRATGIRQ*PVPAWS
Trigger: GCTCCACGCTGGGACGGGCCATTGCCTGATGCCTGT...TGCTCTAATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGGGCAGATGGTGGTGGTaGGGGGTCCCTGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: AALEHNARGCGITSRADLGRWWW*GVPAQS
Trigger: AGACTGTGCAGGGACCCCCCACCACCACCATCTGCC...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGGCAACCAAGCTGAGATaGCCTGTGCTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLATKLR*PVLSFQ
Trigger: CTGGAAAGACAGCACAGGCCATCTCAGCTTGGTTGC...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTACCTTGAAGGGCTCCTaGCTCTCCTTCACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPTLKGS*LSFTGL
Trigger: CAACCCAGTGAAGGAGAGCCAGGAGCCCTTCAAGGT...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTTGGCCGGGCTCTCCTTaGGTGAGCGTGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIWPGSP*VSVPAG
Trigger: CCCAGCTGGCACGCTCACCCAAGGAGAGCCCGGCCA...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGCTGGAGTGTTGAGGTaGGGCTCGGACCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDAGVLR*GSDLRR
Trigger: TCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGC...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCCTCTTCCTCTCAACCTaGTTTCCGTTGGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QDVSGPFLCAFTPTASRVLFLST*FPLVSS
Trigger: GGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAG...GACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp TGCTGGCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTAATATAGCCAGGGTCTaGTCCATCGTAGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CWPLTWAAPSSVLQKVPLNIARV*SIVGGV
Trigger: CACACCACCTACGATGGACCAGACCCTGGCTATATT...AAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp TACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTAGAAGGCTGGAGTGTTaGGGTGGGGCTCGGACCTCA +
Preference number: 4 (lower is better)
Translates to: YSRRCHFILAVCSPMSSIRRLEC*GGARTS
Trigger: TGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCT...AATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp AAAGCAGAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCGGATGTCAACCTTGGTaGGACCACCGGGAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: KAESRAGRQWSLFMCVHPGCQPW*DHRESY
Trigger: GTAGCTCTCCCGGTGGTCTCACCAAGGTTGACATCC...GGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTCTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGGGATGTCAACCTTGGTaGGACCACCGGGAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDEGCQPW*DHRESY
Trigger: GTAGCTCTCCCGGTGGTCTCACCAAGGTTGACATCC...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGCATGTCCCCGGCGTCTaGGCTGTTTTGCACAACCAT +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMHVPGV*AVLHNH
Trigger: ATGGTTGTGCAAAACAGCGCAGACGCCGGGGACATG...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTTTCATCACGCTCATGTaGCCCCCGACCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAAFITLM*PPTWCR
Trigger: CCTGCACCAGGTCGGGGGGCACATGAGCGTGATGAA...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGCTGTCTTTCCAGAGGTaGACTGTGACGGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLLSFQR*TVTVPL
Trigger: CAAAGGTACCGTCACAGTGCACCTCTGGAAAGACAG...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCGTCTGCTGGAGCGTCTaGCATATGGCCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVVCWSV*HMATAA
Trigger: GGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGAC...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTAGAGCATGCAGTCGCTGCCATTaGTGCCGGTGGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRCHFILAVCSPMSSIRACSRCH*CRWSAG
Trigger: TCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCA...TGCTCTAATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TTACACTTGTCCACCAGTCTTGTAAACATTGCCCCTGGTTTCCTCCGTCCTCCACCAGGCAGGCTGAGGTaGTCTGCGCACACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LHLSTSLVNIAPGFLRPPPGRLR*SAHTSS
Trigger: TGAGGAAGTGTGCGCAGAGCACCTCAGCCTGCCTGG...TGGAGGACGGAGGAAACCAGGGGCAATGTTTACAAGACTGGTGGACAAGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp GCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTTTGATAAACCTGCATaGCGCAGATGCGCACACCCA +
Preference number: 4 (lower is better)
Translates to: ASNLGCPLQCTPEGATLSFDKPA*RRCAHP
Trigger: TGGGTGTGCGCATCTGCGGCATGCAGGTTTATCAAA...GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCACTGCCGGTGGTCTGCTaGAGCGTCTGCCATATGGCC +
Preference number: 4 (lower is better)
Translates to: GVWTTLATNRSLFEIYSPLPVVC*SVCHMA
Trigger: GGCCATATGGCAGACGCTCCAGCAGACCACCGGCAG...TGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACGGTGAGCGTGCCAGCTaGGCATGCGGCCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNGERAS*ACGHWA
Trigger: TGCCCAGTGGCCGCATGCCCAGCTGGCACGCTCACC...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTAGAGCACACCAGCGAGAAGGCTaGAGTGTTGAGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RRCHFILAVCSPMSSIRAHQREG*SVEVGL
Trigger: GAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTG...TGCTCTAATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AAAGCAGAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCATGCCGCTTGTTCTCTaGGTACTCGGAGCACAGGCG +
Preference number: 4 (lower is better)
Translates to: KAESRAGRQWSLFMCVHPMPLVL*VLGAQA
Trigger: CGCCTGTGCTCCGAGTACCCAGAGAACAAGCGGCAT...GGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTCTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTAGCTCCCTCCGGAGGTaGCTTCCATTATGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPSSLRR*LPLCRN
Trigger: GTTCCTACATAATGGAAGCCACCTCCGGAGGGAGCT...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGCCTGGGGCTCTTTCTaGTGGTTCCTGCCCATCATA +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDAWGSF*WFLPII
Trigger: TATGATGGGCAGGAACCACCAGAAAGAGCCCCAGGC...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTAGAGCAAGGATGCGGGCTGCCTaGGGCTCTTTCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RRCHFILAVCSPMSSIRARMRAA*GSFWWF
Trigger: GAACCACCAGAAAGAGCCCCAGGCAGCCCGCATCCT...TGCTCTAATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CAGAATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTACCGGGAGAGCTACCGTaGGCTGCCTGGGGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QNVAEWGTPKSAKRFLILPGELP*AAWGAS
Trigger: CGAGGCTCCCCAGGCAGCCCACGGTAGCTCTCCCGG...TAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAACTGGTCCATCGTAGGTaGTGTGCTCATTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: YVRSPPLQAASHGQNVAELVHRR*CAHSSS
Trigger: GCTACTGGAATGAGCACACCACCTACGATGGACCAG...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGGCCAGAGCTCATGCCTaGGCTTGGCTTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMARAHA*AWLCPL
Trigger: AAGTGGACAAAGCCAAGCCCAGGCATGAGCTCTGGC...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAAGCAAGCCGCGTCTCATaGTCAGAATGTGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: YVRSPPLQAASHGQNVAEASRVS*SECGRM
Trigger: CATTCTGCCACATTCTGACCATGAGACGCGGCTTGC...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGCTTCAGTGCAGCCTGTaGCACAGCAGTGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMLQCSL*HSSGNS
Trigger: GGAGTTTCCACTGCTGTGCCACAGGCTGCACTGAAG...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS-3UTR GCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTCCAGCGTGGAGCATTTaGTGTTCACCAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAAPAWSI*CSPEPW
Trigger: CCAGGGCTCTGGTGAACAGCAAATGCTCCACGCTGG...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTAGTCGCTGCCATTGCTaGCGGTGGTCTGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSISRCHC*RWSAGA
Trigger: CGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACT...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCGCCACTGGGCAAGGGTaGAGTCGCTGCCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVATGQG*SRCHCC
Trigger: GCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGC...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTCTTCTTCTCCTCCGATaGATCATCGCCGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: YSRRCHFILAVCSPMSSILLLLR*IIAVLP
Trigger: CGGCAGCACGGCGATGATGCATCGGAGGAGAAGAAG...AATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTCAGGCTGAGGTGCTCTaGGCACACTTCCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCQAEVL*AHFLMW
Trigger: CCACATGAGGAAGTGTGCGCAGAGCACCTCAGCCTG...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAACCTGCATGCCGCAGATaGGCACACCCAGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEPACRR*AHPGRL
Trigger: CAGCCTGCCTGGGTGTGCGCATCTGCGGCATGCAGG...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGGCCTCTAACTTGGGCTaGCCCCTCCAGTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: AALEHNARGCGITSRADLASNLG*PLQCTP
Trigger: TGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTCTGCCTCACAGCTTGTaGGGACTGCAGCATGGCAAC +
Preference number: 4 (lower is better)
Translates to: YSRRCHFILAVCSPMSSILPHSL*GLQHGN
Trigger: GTTGCCATGCTGCAGTCCGCACAAGCTGTGAGGCAG...AATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGGCATTCATGAGCTCTaGCTGCCCTTGGAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAAGIHEL*LPLERA
Trigger: TGCTCGCTCCAAGGGCAGGCAGAGCTCATGAATGCC...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp GTGTCACCTAAAACTCCGCTTAGGAAGATAAGAGGCATTCATGAGCTCTGCCTGTGCGTTCACCCCCACTaGAAGCCGCGTCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: VSPKTPLRKIRGIHELCLCVHPH*KPRLMV
Trigger: GACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCA...CAGGCAGAGCTCATGAATGCCTCTTATCTTCCTAAGCGGAGTTTTAGGTGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTTGGCCCGTCCCAGCGTaGAGCATTTGCTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCWPVPA*SICCSP
Trigger: TGGTGAACAGCAAATGCTCCACGCTGGGACGGGCCA...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCGGTACCTTTGTACTGTaGGGTGAACCGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: FLCAFTPTASRVSWSECGGTFVL*GEPLHG
Trigger: GCCATGAAGCGGTTCACCCCACAGTACAAAGGTACC...GCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATGGGCATGCGGCCACTaGGCAAGGGTGCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEWACGH*ARVQSL
Trigger: CAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCA...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTATGCCGCTTGTTCTCTaGGTACTCGGAGCACAGGCG +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCMPLVL*VLGAQA
Trigger: CGCCTGTGCTCCGAGTACCCAGAGAACAAGCGGCAT...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATAGCTCCCTCCGGAGGTaGCTTCCATTATGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDSSLRR*LPLCRN
Trigger: GTTCCTACATAATGGAAGCCACCTCCGGAGGGAGCT...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCAAGCGGTATGAACTCTaGCTCCTAATGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ASNLGCPLQCTPEGATLSKRYEL*LLMTER
Trigger: CCTCTCTGTCATTAGGAGCCAGAGTTCATACCGCTT...GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTCCTTGCCCCTGGACTTaGACGGATTGGCAGCGATTG +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAAPCPWT*TDWQRL
Trigger: CAATCGCTGCCAATCCGTCCAAGTCCAGGGGCAAGG...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451316.6
3UTR CAA 72 bp AAATATTCCAGAATGTCAGCAATGCTGGCCTCTAACTaGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KYSRMSAMLASN*GCPLQCTPEGA
Trigger: GGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCATTGCTGACATTCTGGAATATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGAATAGAAGCGGTATaGACTCTGGCTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPGIEAV*TLAPND
Trigger: GTCATTAGGAGCCAGAGTTCATACCGCTTCTATTCC...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGGCGTCTGCGCTGTTTTaGACAACCATGGCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: AALEHNARGCGITSRADLASALF*TTMAAD
Trigger: ATCTGCCGCCATGGTTGTGCAAAACAGCGCAGACGC...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGGCTTGCACACCGTATaGTCGTCATACTTCATCACG +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDGLHTV*SSYFIT
Trigger: CGTGATGAAGTATGACGAGCATACGGTGTGCAAGCC...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTGCAGTCGCTGCCATTaGTGCCGGTGGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVCSRCH*CRWSAG
Trigger: TCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCA...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTCCAGGCAGGCTGAGGTaGTCTGCGCACACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIPGRLR*SAHTSS
Trigger: TGAGGAAGTGTGCGCAGAGCACCTCAGCCTGCCTGG...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCTTTGATAAACCTGCATaGCGCAGATGCGCACACCCA +
Preference number: 4 (lower is better)
Translates to: FLCAFTPTASRVSWSECGFDKPA*RRCAHP
Trigger: TGGGTGTGCGCATCTGCGGCATGCAGGTTTATCAAA...GCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCCGTGAGGATGCGGGCTaGCTGGGGCTCTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPREDAG*LGLFLV
Trigger: CACCAGAAAGAGCCCCAGGCAGCCCGCATCCTCACG...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GGGACCCTCCTTTCCACAGGCAAAAATGGAGAATCTGGGGTCTTGCTTTGCCAGTGGTCCCTTTTTATGTaGGTTCACCCCCACTGCAAG +
Preference number: 4 (lower is better)
Translates to: GTLLSTGKNGESGVLLCQWSLFM*VHPHCK
Trigger: CTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCA...CTGGCAAAGCAAGACCCCAGATTCTCCATTTTTGCCTGTGGAAAGGAGGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAACCCCTGGGCCTTCAGTaGAGCCTGTGGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEPLGLQ*SLWHSS
Trigger: ACTGCTGTGCCACAGGCTGCACTGAAGGCCCAGGGG...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS-3UTR CCA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGCTTCCTCCGAGATCGTaGGGAGTGTATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AALEHNARGCGITSRADLLPPRS*GVYGRQ
Trigger: CTGCCTTCCATACACTCCCCACGATCTCGGAGGAAG...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTCTGGCTCTCCTTCACTaGGTTGGCAACCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAALALLH*VGNQAE
Trigger: CTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAG...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TTGAAGGTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTGGAGCGTCTGCCATATaGCCACCGCCGCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: LKVDRTIMKTSKGCLDYPGASAI*PPPPTL
Trigger: CAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCC...AGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTACCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATGCCATTGCTGCCGGTaGTCTGCTGGAGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEECHCCR*SAGASA
Trigger: GGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCA...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGACCTCAGAAGAGCCTTaGCCGGGCTCTCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RTIMKTSKGCLDYPSNQQTSEEP*PGSPWV
Trigger: CACCCAAGGAGAGCCCGGCCAAGGCTCTTCTGAGGT...CTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TTACACTTGTCCACCAGTCTTGTAAACATTGCCCCTGGTTTCCTCCGTCCTCCAGCCTGGGGCTCTTTCTaGTGGTTCCTGCCCATCATA +
Preference number: 4 (lower is better)
Translates to: LHLSTSLVNIAPGFLRPPAWGSF*WFLPII
Trigger: TATGATGGGCAGGAACCACCAGAAAGAGCCCCAGGC...TGGAGGACGGAGGAAACCAGGGGCAATGTTTACAAGACTGGTGGACAAGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATCATCTAAGGGGTGTCTaGACTACCCTAGCAACCAAC +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDHLRGV*TTLATN
Trigger: GTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATG...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TTCATGAGCTCTGCCTGCCCTTGGAGCGAGCAGTCCATACAAGGAGAAAAACCAGAATGTCAGCAATGCTaGCCTCTAACTTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FMSSACPWSEQSIQGEKPECQQC*PLTWAA
Trigger: GGCAGCCCAAGTTAGAGGCCAGCATTGCTGACATTC...TGGTTTTTCTCCTTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp TACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTAGCTCTGCCTGCCCTTaGAGCGAGCAGTCCATACAA +
Preference number: 4 (lower is better)
Translates to: YSRRCHFILAVCSPMSSISSACP*SEQSIQ
Trigger: TTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCT...AATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAACAGAATGTGGCAGAATaGGGAACTCCAAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: YVRSPPLQAASHGQNVAEQNVAE*GTPKSA
Trigger: AGCAGACTTTGGAGTTCCCCATTCTGCCACATTCTG...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTTCCAGAGGTGCACTGTaGCGGTACCTTTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCSRGAL*RYLCTV
Trigger: CACAGTACAAAGGTACCGTCACAGTGCACCTCTGGA...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTCCAGAGGTGCACTGTaGCGGTACCTTTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: AALEHNARGCGITSRADLSRGAL*RYLCTV
Trigger: CACAGTACAAAGGTACCGTCACAGTGCACCTCTGGA...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAAGCAGGCCCCACGGGTTaGAGCTCTTCCTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEAGPTG*SSSSQP
Trigger: AGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGC...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACGCAGGCCCCACGGGTTaGAGCTCTTCCTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNAGPTG*SSSSQP
Trigger: AGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGC...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp TTCATGAGCTCTGCCTGCCCTTGGAGCGAGCAGTCCATACAAGGAGAAAAACCACCTGCCCATCATAGATaGCAAGGAGAGAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FMSSACPWSEQSIQGEKPPAHHR*QGESWN
Trigger: ATTCCAGCTCTCTCCTTGTCATCTATGATGGGCAGG...TGGTTTTTCTCCTTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCCTGCCCATCATAGATaGCAAGGAGAGAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDEPAHHR*QGESWN
Trigger: ATTCCAGCTCTCTCCTTGTCATCTATGATGGGCAGG...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGCAAGGAGAAAAACCATaGGCTCATGAACTCACTCTT +
Preference number: 4 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLQGEKP*AHELTL
Trigger: AAGAGTGAGTTCATGAGCTCATGGTTTTTCTCCTTG...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCTTCATCACGCTCATGTaGCCCCCGACCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPFITLM*PPTWCR
Trigger: CCTGCACCAGGTCGGGGGGCACATGAGCGTGATGAA...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TGCTTCAAGTCAAGTTTTCTGCCTCACAGCTTGTGCGGACTGCAGCATGGCAACGGCTTGCACACCGTATaGTCGTCATACTTCATCACG +
Preference number: 4 (lower is better)
Translates to: CFKSSFLPHSLCGLQHGNGLHTV*SSYFIT
Trigger: CGTGATGAAGTATGACGAGCATACGGTGTGCAAGCC...GTTGCCATGCTGCAGTCCGCACAAGCTGTGAGGCAGAAAACTTGACTTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp TTCATGAGCTCTGCCTGCCCTTGGAGCGAGCAGTCCATACAAGGAGAAAAACCATCCAGGACACAGGGATaGGTGTACTGTGACACTACA +
Preference number: 4 (lower is better)
Translates to: FMSSACPWSEQSIQGEKPSRTQG*VYCDTT
Trigger: TGTAGTGTCACAGTACACGCATCCCTGTGTCCTGGA...TGGTTTTTCTCCTTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCCTTCTTCTCCTCCGATaGATCATCGCCGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVLLLLR*IIAVLP
Trigger: CGGCAGCACGGCGATGATGCATCGGAGGAGAAGAAG...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTCAGGCTGAGGTGCTCTaGGCACACTTCCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIQAEVL*AHFLMW
Trigger: CCACATGAGGAAGTGTGCGCAGAGCACCTCAGCCTG...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGTTCATGAGCTCTGCCTaGCCTTGGAGCGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RTIMKTSKGCLDYPSNQQFMSSA*PWSEQS
Trigger: GGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAA...CTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGGTACCTTTGTACTGTaGGGTGAACCGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: SIMPGDVESPPELICSAAGTFVL*GEPLHG
Trigger: GCCATGAAGCGGTTCACCCCACAGTACAAAGGTACC...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTAGAGCACAACCTGGTTTCCGTTaGTGTCTTCCACCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: RRCHFILAVCSPMSSIRAQPGFR*CLPPAR
Trigger: TCTCGCTGGTGGAAGACACCAACGGAAACCAGGTTG...TGCTCTAATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCGCACACTTCCTCATGTaGCGGGCCTTCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVAHFLM*RAFFSS
Trigger: GGAGGAGAAGAAGGCCCGCCACATGAGGAAGTGTGC...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAAAGGATGCGGGCTGCCTaGGGCTCTTTCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEERMRAA*GSFWWF
Trigger: GAACCACCAGAAAGAGCCCCAGGCAGCCCGCATCCT...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATTTCATTCTCCCTCTTaGATATCCTGCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: YVRSPPLQAASHGQNVAEFHSPS*ISCRIL
Trigger: CAGGATCCTGCAGGATATCCAAGAGGGAGAATGAAA...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp GGGACCCTCCTTTCCACAGGCAAAAATGGAGAATCTGGGGTCTTGCTTTGCCAGGCAGAGCAGATGAGATaGGTAGATCTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTLLSTGKNGESGVLLCQAEQMR*VDLFCF
Trigger: GAAGCAGAAGAGATCTACCCATCTCATCTGCTCTGC...CTGGCAAAGCAAGACCCCAGATTCTCCATTTTTGCCTGTGGAAAGGAGGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCTTTGTACTGTGGGGTaGACCGCTTCATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNLCTVG*TASWPA
Trigger: CGCTGGCCATGAAGCGGTTCACCCCACAGTACAAAG...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGACGTATCTCAGTGCTTaGCTCAAGGGCATCGTAATA +
Preference number: 4 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMTYLSA*LKGIVI
Trigger: TATTACGATGCCCTTGAGTCAAGCACTGAGATACGT...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCCAGCGTGGAGCATTTaGTGTTCACCAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNPAWSI*CSPEPW
Trigger: CCAGGGCTCTGGTGAACAGCAAATGCTCCACGCTGG...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTCATGTCCCCGGCGTCTaGGCTGTTTTGCACAACCAT +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIHVPGV*AVLHNH
Trigger: ATGGTTGTGCAAAACAGCGCAGACGCCGGGGACATG...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACGGGAGACGAGGGGCTTaGACACCGTATGCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNGRRGA*TPYARH
Trigger: ATGACGAGCATACGGTGTGCAAGCCCCTCGTCTCCC...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTTCCAGGACACAGGGATaGGTGTACTGTGACACTACA +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCSRTQG*VYCDTT
Trigger: TGTAGTGTCACAGTACACGCATCCCTGTGTCCTGGA...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CAGAATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTAGATGCATCATCGCCGTaGTGCCGGGTCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QNVAEWGTPKSAKRFLILDASSP*CRVPIF
Trigger: GAAGATGGGGACCCGGCAGCACGGCGATGATGCATC...TAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCGCCTCTAACTTGGGCTaGCCCCTCCAGTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPASNLG*PLQCTP
Trigger: TGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAACTCACTCTTCAAGGCTaGTTCAAGTCAAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: YVRSPPLQAASHGQNVAELTLQG*FKSSFL
Trigger: CAGAAAACTTGACTTGAAGCAGCCTTGAAGAGTGAG...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATTGGGTAGATCTCTTCTaGTTCATCCTGTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDWVDLF*FILCHL
Trigger: TAGGTGACACAGGATGAAGCAGAAGAGATCTACCCA...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCTCTGGGGTCTTGCTTTaGCAGAGCTCATGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPSGVLL*QSSCLG
Trigger: GCCCAGGCATGAGCTCTGGCAAAGCAAGACCCCAGA...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp CAAGGCTGCTTCAAGTCAAGTTTTCTGCCTCACAGCTTGTGCGGACTGCAGCATGGTAACGTATCTCAGTaGTTGACTCAAGGGCATCGT +
Preference number: 4 (lower is better)
Translates to: QGCFKSSFLPHSLCGLQHGNVSQ*LTQGHR
Trigger: ACGATGCCCTTGAGTCAAGCACTGAGATACGTTACC...ATGCTGCAGTCCGCACAAGCTGTGAGGCAGAAAACTTGACTTGAAGCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCATCGTGGGGAGTGTATaGAAGGCAGGGCCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVIVGSV*KAGPRN
Trigger: ATTCCTGGGCCCTGCCTTCCATACACTCCCCACGAT...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AAAGCAGAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCAAGCGGTATGAACTCTaGCTCCTAATGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KAESRAGRQWSLFMCVHPKRYEL*LLMTER
Trigger: CCTCTCTGTCATTAGGAGCCAGAGTTCATACCGCTT...GGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTAATATAGCCAGGGTCTaGTCCATCGTAGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCNIARV*SIVGGV
Trigger: CACACCACCTACGATGGACCAGACCCTGGCTATATT...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATCAAAAATGGAGAATCTaGGGTCTTGCTTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDQKWRI*GLALPE
Trigger: CTCTGGCAAAGCAAGACCCCAGATTCTCCATTTTTG...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp GGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCATGTAAACATTGCCCCTaGTTTCCTCCGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GVWTTLATNRSLFEIYSPCKHCP*FPPSSR
Trigger: CCTGGAGGACGGAGGAAACCAGGGGCAATGTTTACA...TGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTAAACTCCCTTGCCCCTaGACTTGGACGGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIKLPCP*TWTDWQ
Trigger: CTGCCAATCCGTCCAAGTCCAGGGGCAAGGGAGTTT...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451316.6
3UTR CAA 72 bp AGGAAGATAAGAGGCATTCATGAGCTCTGCCTGCCCTaGGAGCGAGCAGTCCATACAAGGAGAAAAACCATG +
Preference number: 4 (lower is better)
Translates to: RKIRGIHELCLP*ERAVHTRRKTM
Trigger: CATGGTTTTTCTCCTTGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTCATGAATGCCTCTTATCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAAGGTTGGCAACCAAGCTaGGATGGCCTGTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEGWQPS*DGLCCL
Trigger: AAGACAGCACAGGCCATCTCAGCTTGGTTGCCAACC...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGTCTGAACCCCTCCACTaGGAGTTTTCTTCCATAGTA +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDESEPLH*EFSSIV
Trigger: TACTATGGAAGAAAACTCTCAGTGGAGGGGTTCAGA...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp AGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGATAGAGGGCTTGTCTaGACCCCTCCACTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: RTIMKTSKGCLDYPSNQQDRGLV*TPPLRV
Trigger: AACTCTCAGTGGAGGGGTTCAGACAAGCCCTCTATC...CTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTGGAATAGAAGCGGTATaGACTCTGGCTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: HNARGCGITSRADLFSSCGIEAV*TLAPND
Trigger: GTCATTAGGAGCCAGAGTTCATACCGCTTCTATTCC...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTAAGACAAGGGTGCAGTCGCTaGCATTGCTGCCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NVAEWGTPKSAKRFLILRQGCSR*HCCRWS
Trigger: AGACCACCGGCAGCAATGGCAGCGACTGCACCCTTG...TCTTAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp TACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCAGCATTCCCTCTTGGATATCCTaGAGGATCCTGATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: YSRRCHFILAVCSPMSSIPSWIS*RILMRF
Trigger: AAACCTCATCAGGATCCTGCAGGATATCCAAGAGGG...AATGCTGCTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GTGTCACCTAAAACTCCGCTTAGGAAGATAAGAGGCATTCATGAGCTCTGCCTGCACTTAGAAGCTGGGTaGAGAGCAGATGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: VSPKTPLRKIRGIHELCLHLEAG*RADEMG
Trigger: ACCCATCTCATCTGCTCTGCACCCAGCTTCTAAGTG...CAGGCAGAGCTCATGAATGCCTCTTATCTTCCTAAGCGGAGTTTTAGGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp GTGTCACCTAAAACTCCGCTTAGGAAGATAAGAGGCATTCATGAGCTCTGCCTGCAGTCTTGTAAACATTaGCCCTGGTTTCCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: VSPKTPLRKIRGIHELCLQSCKH*PWFPPS
Trigger: GGACGGAGGAAACCAGGGGCAATGTTTACAAGACTG...CAGGCAGAGCTCATGAATGCCTCTTATCTTCCTAAGCGGAGTTTTAGGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTGTTTTGCACAACCATaGCGGCAGATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVCFAQP*RQMVVV
Trigger: CACCACCACCATCTGCCGCCATGGTTGTGCAAAACA...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TTGAAGGTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTGCTGGAGTGTTGAGGTaGGGCTCGGACCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LKVDRTIMKTSKGCLDYPAGVLR*GSDLRR
Trigger: TCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGC...AGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTACCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTCAACCTGGTTTCCGTTaGTGTCTTCCACCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIQPGFR*CLPPAR
Trigger: TCTCGCTGGTGGAAGACACCAACGGAAACCAGGTTG...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTCTGGTCCATCGTAGGTaGTGTGCTCATTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSILVHRR*CAHSSS
Trigger: GCTACTGGAATGAGCACACCACCTACGATGGACCAG...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp AAAGCAGAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCGTGCGGACTGCAGCATaGCAACGAGTAAACATTTTT +
Preference number: 4 (lower is better)
Translates to: KAESRAGRQWSLFMCVHPVRTAA*QRVNIF
Trigger: AAAAATGTTTACTCGTTGCCATGCTGCAGTCCGCAC...GGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTCTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTAGCAACAAGAACCGATaGCGCTTGTTCTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSISNKNR*RLFSGY
Trigger: GTACCCAGAGAACAAGCGGCATCGGTTCTTGTTGCT...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATGTTTTGCACAACCATaGCGGCAGATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEECFAQP*RQMVVV
Trigger: CACCACCACCATCTGCCGCCATGGTTGTGCAAAACA...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAAGCAACCAAGCTGAGATaGCCTGTGCTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEATKLR*PVLSFQ
Trigger: CTGGAAAGACAGCACAGGCCATCTCAGCTTGGTTGC...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CAGAATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTACTGGCTCTCCTTCACTaGGTTGGCAACCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QNVAEWGTPKSAKRFLILLALLH*VGNQAE
Trigger: CTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAG...TAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACGAATGTCAGCAATGCTaGCCTCTAACTTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNECQQC*PLTWAA
Trigger: GGCAGCCCAAGTTAGAGGCCAGCATTGCTGACATTC...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACTGGACTTGGACGGATTaGCAGCGATTGTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNWTWTD*QRLSTR
Trigger: CCTGGTAGACAATCGCTGCCAATCCGTCCAAGTCCA...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS-3UTR TCA 90 bp GTGTCACCTAAAACTCCGCTTAGGAAGATAAGAGGCATTCATGAGCTCTGCCTGCTGTCTGTTCTCCGATaGGCAGCATTAGAGCATAAT +
Preference number: 4 (lower is better)
Translates to: VSPKTPLRKIRGIHELCLLSVLR*AALEHN
Trigger: ATTATGCTCTAATGCTGCTCATCGGAGAACAGACAG...CAGGCAGAGCTCATGAATGCCTCTTATCTTCCTAAGCGGAGTTTTAGGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp GGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCACTGTCTGTTCTCCGATaGGCAGCATTAGAGCATAAT +
Preference number: 4 (lower is better)
Translates to: GVWTTLATNRSLFEIYSPLSVLR*AALEHN
Trigger: ATTATGCTCTAATGCTGCTCATCGGAGAACAGACAG...TGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTAATCTTGTCTCTCAGTaGCCACCATGTACAGGCATC +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSINLVSQ*PPCTGI
Trigger: GATGCCTGTACATGGTGGGCACTGAGAGACAAGATT...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAACTGTCTTTCCAGAGGTaGACTGTGACGGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEELSFQR*TVTVPL
Trigger: CAAAGGTACCGTCACAGTGCACCTCTGGAAAGACAG...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACAGCAACAAGAACCGATaGCGCTTGTTCTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNSNKNR*RLFSGY
Trigger: GTACCCAGAGAACAAGCGGCATCGGTTCTTGTTGCT...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp AGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGCCCTCTTGGATATCCTaGAGGATCCTGATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RTIMKTSKGCLDYPSNQQPSWIS*RILMRF
Trigger: AAACCTCATCAGGATCCTGCAGGATATCCAAGAGGG...CTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCGTGTACTCCAGAAGGTaGCACTTTATCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPVYSRR*HFILAV
Trigger: GACAGCCAGGATAAAGTGGCACCTTCTGGAGTACAC...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACGTGTACTCCAGAAGGTaGCACTTTATCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNVYSRR*HFILAV
Trigger: GACAGCCAGGATAAAGTGGCACCTTCTGGAGTACAC...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAACCAGAATGTCAGCAATaGTGGCCTCTAACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEPECQQ*WPLTWA
Trigger: AGCCCAAGTTAGAGGCCAGCATTGCTGACATTCTGG...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCTCTTCCTCTCAACCTaGTTTCCGTTGGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNLFLST*FPLVSS
Trigger: GGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAG...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCCATCTAAGGGGTGTCTaGACTACCCTAGCAACCAAC +
Preference number: 4 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPHLRGV*TTLATN
Trigger: GTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATG...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR TCA 90 bp AATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTAAGAGATAGAGGGCTTGTCTaGACCCCTCCACTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: NVAEWGTPKSAKRFLILRDRGLV*TPPLRV
Trigger: AACTCTCAGTGGAGGGGTTCAGACAAGCCCTCTATC...TCTTAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR GCA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAAAATCTTGTCTCTCAGTaGCCACCATGTACAGGCATC +
Preference number: 4 (lower is better)
Translates to: WTTLATNRSLFEIYSPEENLVSQ*PPCTGI
Trigger: GATGCCTGTACATGGTGGGCACTGAGAGACAAGATT...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR GCA 90 bp TTGAAGGTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTACAGCTTGTGCGGACTaGAGCATGGCAACGAGTAAA +
Preference number: 4 (lower is better)
Translates to: LKVDRTIMKTSKGCLDYPTACAD*SMATSK
Trigger: TTTACTCGTTGCCATGCTGCAGTCCGCACAAGCTGT...AGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTTTTCATTCTCCCTCTTaGATATCCTGCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIFHSPS*ISCRIL
Trigger: CAGGATCCTGCAGGATATCCAAGAGGGAGAATGAAA...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CCA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTTTCCACAGGCAAAAATaGAGAATCTGGGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIFHRQK*RIWGLA
Trigger: AGCAAGACCCCAGATTCTCCATTTTTGCCTGTGGAA...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCAGAGCAGGACGTCAGTaGTCCCTTTTTATGTGCGTT +
Preference number: 4 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPRAGRQ*SLFMCV
Trigger: AACGCACATAAAAAGGGACCACTGACGTCCTGCTCT...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CCA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGATTTATTTCCCTAATTaGGTAACGTATCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDEIYFPN*VTYLSA
Trigger: AGCACTGAGATACGTTACCCAATTAGGGAAATAAAT...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR TCA 90 bp TTGAAGGTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTTCTGAACCCCTCCACTaGGAGTTTTCTTCCATAGTA +
Preference number: 4 (lower is better)
Translates to: LKVDRTIMKTSKGCLDYPSEPLH*EFSSIV
Trigger: TACTATGGAAGAAAACTCTCAGTGGAGGGGTTCAGA...AGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp GCTGGGCATGCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTGCTaGCGGTGGTCTGCTGGAGCGTCTGCCATATGGCCACCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AGHAATGQGCSRCHC*RWSAGASAIWPPPP
Trigger: CGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp GCCGGGCTCTCCTTGGGTGAGCGTGCCAGCTGGGCATGCGGCCACTaGGCAAGGGTGCAGTCGCTGCCATTGCTGCCGGTGGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: AGLSLGERASWACGH*ARVQSLPLLPVVCW
Trigger: CCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGCTGGCACGCTCACCCAAGGAGAGCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp CCAGCTGGGCATGCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTaGTGCCGGTGGTCTGCTGGAGCGTCTGCCATATGGCCACCGCCG +
Preference number: 5 (lower is better)
Translates to: PAGHAATGQGCSRCH*CRWSAGASAIWPPP
Trigger: CGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp AGAGCCTTGGCCGGGCTCTCCTTGGGTGAGCGTGCCAGCTGGGCATaGGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTGCTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RALAGLSLGERASWA*GHWARVQSLPLLPV
Trigger: CACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGCTGGCACGCTCACCCAAGGAGAGCCCGGCCAAGGCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS TCA 90 bp GTGAGACCACCGGGAGAGCTACCGTGGGCTGCCTGGGGAGCCTCGTaGGGATGCGGGCTGCCTGGGGCTCTTTCTGGTGGTTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: VRPPGELPWAAWGAS*GCGLPGALSGGSCP
Trigger: TGGGCAGGAACCACCAGAAAGAGCCCCAGGCAGCCCGCATCCTCACGAGGCTCCCCAGGCAGCCCACGGTAGCTCTCCCGGTGGTCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp GGCCACTGGGCAAGGGTGCAGTCGCTGCCATTGCTGCCGGTGGTCTaGTGGAGCGTCTGCCATATGGCCACCGCCGCCGACTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: GHWARVQSLPLLPVV*WSVCHMATAADSVE
Trigger: CTCCACAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CATGCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTGCTGCCGGTaGTCTGCTGGAGCGTCTGCCATATGGCCACCGCCGCCGACTCTG +
Preference number: 5 (lower is better)
Translates to: HAATGQGCSRCHCCR*SAGASAIWPPPPTL
Trigger: CAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp GCGGATGTCAACCTTGGTGAGACCACCGGGAGAGCTACCGTGGGCTaGCTGGGGAGCCTCGTGAGGATGCGGGCTGCCTGGGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: ADVNLGETTGRATVG*LGSLVRMRAAWGSF
Trigger: GAAAGAGCCCCAGGCAGCCCGCATCCTCACGAGGCTCCCCAGGCAGCCCACGGTAGCTCTCCCGGTGGTCTCACCAAGGTTGACATCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CACTGGGCAAGGGTGCAGTCGCTGCCATTGCTGCCGGTGGTCTGCTaGAGCGTCTGCCATATGGCCACCGCCGCCGACTCTGTGGAGACC +
Preference number: 5 (lower is better)
Translates to: HWARVQSLPLLPVVC*SVCHMATAADSVET
Trigger: GGTCTCCACAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CTCAGAAGAGCCTTGGCCGGGCTCTCCTTGGGTGAGCGTGCCAGCTaGGCATGCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTGCTG +
Preference number: 5 (lower is better)
Translates to: LRRALAGLSLGERAS*ACGHWARVQSLPLL
Trigger: CAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGCTGGCACGCTCACCCAAGGAGAGCCCGGCCAAGGCTCTTCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp AGGGTGCAGTCGCTGCCATTGCTGCCGGTGGTCTGCTGGAGCGTCTaGCATATGGCCACCGCCGCCGACTCTGTGGAGACCTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: RVQSLPLLPVVCWSV*HMATAADSVETLKG
Trigger: GCCCTTCAAGGTCTCCACAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CGCACACCCAGGCAGGCTGAGGTGCTCTGCGCACACTTCCTCATGTaGCGGGCCTTCTTCTCCTCCGATGCATCATCGCCGTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RTPRQAEVLCAHFLM*RAFFSSDASSPCCR
Trigger: CCGGCAGCACGGCGATGATGCATCGGAGGAGAAGAAGGCCCGCCACATGAGGAAGTGTGCGCAGAGCACCTCAGCCTGCCTGGGTGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CGATGCCGCTTGTTCTCTGGGTACTCGGAGCACAGGCGGGTCAGGTaGGCCTGGTGGCATTGCAGGCCCCACGGGTTGAAGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RCRLFSGYSEHRRVR*AWWHCRPHGLKLFL
Trigger: GAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTGCTCCGAGTACCCAGAGAACAAGCGGCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp TCTGGGTACTCGGAGCACAGGCGGGTCAGGTGGGCCTGGTGGCATTaGAGGCCCCACGGGTTGAAGCTCTTCCTCTCAACCTGGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SGYSEHRRVRWAWWH*RPHGLKLFLSTWFP
Trigger: CGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTGCTCCGAGTACCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CGCTTGTTCTCTGGGTACTCGGAGCACAGGCGGGTCAGGTGGGCCTaGTGGCATTGCAGGCCCCACGGGTTGAAGCTCTTCCTCTCAACC +
Preference number: 5 (lower is better)
Translates to: RLFSGYSEHRRVRWA*WHCRPHGLKLFLST
Trigger: GGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTGCTCCGAGTACCCAGAGAACAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS TCA 90 bp CCTGGTTTCCGTTGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTTaGGGTGGGGCTCGGACCTCAGAAGAGCCTTGGCCGGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: PGFRWCLPPARRLEC*GGARTSEEPWPGSP
Trigger: AGGAGAGCCCGGCCAAGGCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp GCGCAGTGTGAGCAGGGAAGACCCCTGGGCCTTCAGTGCAGCCTGTaGCACAGCAGTGGAAACTCCCTTGCCCCTGGACTTGGACGGATT +
Preference number: 5 (lower is better)
Translates to: AQCEQGRPLGLQCSL*HSSGNSLAPGLGRI
Trigger: AATCCGTCCAAGTCCAGGGGCAAGGGAGTTTCCACTGCTGTGCCACAGGCTGCACTGAAGGCCCAGGGGTCTTCCCTGCTCACACTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS TCA 90 bp ACAGGCGGGTCAGGTGGGCCTGGTGGCATTGCAGGCCCCACGGGTTaGAGCTCTTCCTCTCAACCTGGTTTCCGTTGGTGTCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: TGGSGGPGGIAGPTG*SSSSQPGFRWCLPP
Trigger: TGGTGGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp GTGGGGAGTGTATGGAAGGCAGGGCCCAGGAATCTTGTCTCTCAGTaGCCACCATGTACAGGCATCAGGCAATGGCCCGTCCCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: VGSVWKAGPRNLVSQ*PPCTGIRQWPVPAW
Trigger: CCACGCTGGGACGGGCCATTGCCTGATGCCTGTACATGGTGGGCACTGAGAGACAAGATTCCTGGGCCCTGCCTTCCATACACTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CATATGGCCACCGCCGCCGACTCTGTGGAGACCTTGAAGGGCTCCTaGCTCTCCTTCACTGGGTTGGCAACCAAGCTGAGATGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: HMATAADSVETLKGS*LSFTGLATKLRWPV
Trigger: CACAGGCCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAGGAGCCCTTCAAGGTCTCCACAGAGTCGGCGGCGGTGGCCATATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp TTTCCGTTGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTTGAGGTaGGGCTCGGACCTCAGAAGAGCCTTGGCCGGGCTCTCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: FPLVSSTSEKAGVLR*GSDLRRALAGLSLG
Trigger: ACCCAAGGAGAGCCCGGCCAAGGCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CCTCTCAACCTGGTTTCCGTTGGTGTCTTCCACCAGCGAGAAGGCTaGAGTGTTGAGGTGGGGCTCGGACCTCAGAAGAGCCTTGGCCGG +
Preference number: 5 (lower is better)
Translates to: PLNLVSVGVFHQREG*SVEVGLGPQKSLGR
Trigger: CCGGCCAAGGCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAGGTTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAGAATTGGCCGGGCTCTCCTaGGGTGAGCGTGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: YVRSPPLQAASHGQNVAELAGLS*GERASW
Trigger: CCAGCTGGCACGCTCACCCAAGGAGAGCCCGGCCAA...TTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp TGCTGGCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTGAGAAGGCTGGAGTGTaGAGGTGGGGCTCGGACCTC +
Preference number: 5 (lower is better)
Translates to: CWPLTWAAPSSVLQKVPLEKAGV*RWGSDL
Trigger: GAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTC...AAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 90 bp GCGGCAGGGATTCATAGAACCTCTGCTCCCGGGAGACGAGGGGCTTaGACACCGTATGCTCGTCATACTTCATCACGCTCATGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: AAGIHRTSAPGRRGA*TPYARHTSSRSCAP
Trigger: GGGGGCACATGAGCGTGATGAAGTATGACGAGCATACGGTGTGCAAGCCCCTCGTCTCCCGGGAGCAGAGGTTCTATGAATCCCTGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS-3UTR CAA 90 bp CAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCGACTCTGTGGAGACCTaGAAGGGCTCCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: QDVSGPFLCAFTPTASRVDSVET*KGSWLS
Trigger: GGAGAGCCAGGAGCCCTTCAAGGTCTCCACAGAGTC...GACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp GCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCGACCTCAGAAGAGCCTaGGCCGGGCTCTCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: ASNLGCPLQCTPEGATLSDLRRA*AGLSLG
Trigger: ACCCAAGGAGAGCCCGGCCAAGGCTCTTCTGAGGTC...GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp CGCCGACTCTGTGGAGACCTTGAAGGGCTCCTGGCTCTCCTTCACTaGGTTGGCAACCAAGCTGAGATGGCCTGTGCTGTCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: RRLCGDLEGLLALLH*VGNQAEMACAVFPE
Trigger: CTCTGGAAAGACAGCACAGGCCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAGGAGCCCTTCAAGGTCTCCACAGAGTCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGGTGCAGTCGCTGCCATaGCTGCCGGTGGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMVQSLP*LPVVCW
Trigger: CCAGCAGACCACCGGCAGCAATGGCAGCGACTGCAC...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGATGCTGGCCTCTAACTaGGGCTGCCCCCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLMLASN*GCPLQC
Trigger: ACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCAT...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp AGGAATCTTGTCTCTCAGTGCCCACCATGTACAGGCATCAGGCAATaGCCCGTCCCAGCGTGGAGCATTTGCTGTTCACCAGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RNLVSQCPPCTGIRQ*PVPAWSICCSPEPW
Trigger: CCAGGGCTCTGGTGAACAGCAAATGCTCCACGCTGGGACGGGCCATTGCCTGATGCCTGTACATGGTGGGCACTGAGAGACAAGATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 90 bp GGCGTCTGCGCTGTTTTGCACAACCATGGCGGCAGATGGTGGTGGTaGGGGGTCCCTGCACAGTCTGCTAGAGGAAGGTTTGAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: GVCAVLHNHGGRWWW*GVPAQSARGRFEVE
Trigger: TTCTACTTCAAACCTTCCTCTAGCAGACTGTGCAGGGACCCCCCACCACCACCATCTGCCGCCATGGTTGTGCAAAACAGCGCAGACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS CCA 90 bp TGGTGGCATTGCAGGCCCCACGGGTTGAAGCTCTTCCTCTCAACCTaGTTTCCGTTGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTTG +
Preference number: 5 (lower is better)
Translates to: WWHCRPHGLKLFLST*FPLVSSTSEKAGVL
Trigger: CAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCCGGGAGACGAGGGGCTaGCACACCGTATGCTCGTCA +
Preference number: 5 (lower is better)
Translates to: FLCAFTPTASRVSWSECGRETRG*HTVCSS
Trigger: TGACGAGCATACGGTGTGCAAGCCCCTCGTCTCCCG...GCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS CCA 90 bp AAGGGCTCCTGGCTCTCCTTCACTGGGTTGGCAACCAAGCTGAGATaGCCTGTGCTGTCTTTCCAGAGGTGCACTGTGACGGTACCTTTG +
Preference number: 5 (lower is better)
Translates to: KGSWLSFTGLATKLR*PVLSFQRCTVTVPL
Trigger: CAAAGGTACCGTCACAGTGCACCTCTGGAAAGACAGCACAGGCCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAGGAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCCCCAGCGTGGAGCATTaGCTGTTCACCAGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: FLCAFTPTASRVSWSECGPSVEH*LFTRAL
Trigger: CAGGGCTCTGGTGAACAGCAAATGCTCCACGCTGGG...GCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGGCGTCTGCGCTGTTTaGCACAACCATGGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDGVCAV*HNHGGR
Trigger: TCTGCCGCCATGGTTGTGCAAAACAGCGCAGACGCC...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp AAAGCAGAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCGAGAAGGCTGGAGTGTaGAGGTGGGGCTCGGACCTC +
Preference number: 5 (lower is better)
Translates to: KAESRAGRQWSLFMCVHPEKAGV*RWGSDL
Trigger: GAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTC...GGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTCTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGATGCTGGCCTCTAACTaGGGCTGCCCCCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMMLASN*GCPLQC
Trigger: ACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCAT...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCGAGCTCTGCCTGCCCTaGGAGCGAGCAGTCCATACA +
Preference number: 5 (lower is better)
Translates to: FLCAFTPTASRVSWSECGELCLP*ERAVHT
Trigger: TGTATGGACTGCTCGCTCCAAGGGCAGGCAGAGCTC...GCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp GCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCCTGGACTTGGACGGATaGGCAGCGATTGTCTACCAG +
Preference number: 5 (lower is better)
Translates to: ASNLGCPLQCTPEGATLSLDLDG*AAIVYQ
Trigger: CTGGTAGACAATCGCTGCCAATCCGTCCAAGTCCAG...GGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS-3UTR CAA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGCCCAGCGTGGAGCATTaGCTGTTCACCAGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDEPSVEH*LFTRAL
Trigger: CAGGGCTCTGGTGAACAGCAAATGCTCCACGCTGGG...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp CCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATCAGGGCCCAGGAATCTaGTCTCTCAGTGCCCACCAT +
Preference number: 5 (lower is better)
Translates to: PSSVLQKVPLYPGCLFSDQGPGI*SLSAHH
Trigger: ATGGTGGGCACTGAGAGACAAGATTCCTGGGCCCTG...ATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTCGGGAGACGAGGGGCTaGCACACCGTATGCTCGTCA +
Preference number: 5 (lower is better)
Translates to: SIMPGDVESPPELICSAARETRG*HTVCSS
Trigger: TGACGAGCATACGGTGTGCAAGCCCCTCGTCTCCCG...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp CCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTTCAACCTGGTTTCCGTaGGTGTCTTCCACCAGCGAG +
Preference number: 5 (lower is better)
Translates to: PLTWAAPSSVLQKVPLYPSTWFP*VSSTSE
Trigger: CTCGCTGGTGGAAGACACCAACGGAAACCAGGTTGA...AGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTGTGCAGTCGCTGCCATaGCTGCCGGTGGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIVQSLP*LPVVCW
Trigger: CCAGCAGACCACCGGCAGCAATGGCAGCGACTGCAC...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATTGGCCGGGCTCTCCTaGGGTGAGCGTGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: WTTLATNRSLFEIYSPEELAGLS*GERASW
Trigger: CCAGCTGGCACGCTCACCCAAGGAGAGCCCGGCCAA...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGATGCGGATGTCAACCTaGGTGAGACCACCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDEMRMST*VRPPGE
Trigger: CTCTCCCGGTGGTCTCACCAAGGTTGACATCCGCAT...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TGCTTCAAGTCAAGTTTTCTGCCTCACAGCTTGTGCGGACTGCAGCATGGCAACATCTGGGGTCTTGCTTaGCCAGAGCTCATGCCTGGG +
Preference number: 5 (lower is better)
Translates to: CFKSSFLPHSLCGLQHGNIWGLA*PELMPG
Trigger: CCCAGGCATGAGCTCTGGCAAAGCAAGACCCCAGAT...GTTGCCATGCTGCAGTCCGCACAAGCTGTGAGGCAGAAAACTTGACTTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp CCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGGGAGAATCTGGGGTCTaGCTTTGCCAGAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: PPVYSRRCHFILAVCSPMGESGV*LCQSSC
Trigger: GCATGAGCTCTGGCAAAGCAAGACCCCAGATTCTCC...CATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGCCCTTGCCCCTGGACTaGGACGGATTGGCAGCGATT +
Preference number: 5 (lower is better)
Translates to: AALEHNARGCGITSRADLPLPLD*DGLAAI
Trigger: AATCGCTGCCAATCCGTCCAAGTCCAGGGGCAAGGG...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS-3UTR CAA 90 bp TCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGTCTGTTCTCCGATGAGACTGTGACGGTACCTTaGTACTGTGGGGTGAACCGC +
Preference number: 5 (lower is better)
Translates to: SSVLQKVPLYPGCLFSDETVTVP*YCGVNR
Trigger: GCGGTTCACCCCACAGTACAAAGGTACCGTCACAGT...CTCATCGGAGAACAGACAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp AAAGCAGAGAGTAGAGCAGGACGTCAGTGGTCCCTTTTTATGTGCGTTCACCCCTCAACCTGGTTTCCGTaGGTGTCTTCCACCAGCGAG +
Preference number: 5 (lower is better)
Translates to: KAESRAGRQWSLFMCVHPSTWFP*VSSTSE
Trigger: CTCGCTGGTGGAAGACACCAACGGAAACCAGGTTGA...GGGGTGAACGCACATAAAAAGGGACCACTGACGTCCTGCTCTACTCTCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACGTGGGCCTGGTGGCATaGCAGGCCCCACGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNVGLVA*QAPRVE
Trigger: TTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCAC...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCGTGGGCCTGGTGGCATaGCAGGCCCCACGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPVGLVA*QAPRVE
Trigger: TTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCAC...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp AGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTTTTCTGCCTCACAGCTaGTGCGGACTGCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: SIMPGDVESPPELICSAAFLPHS*CGLQHG
Trigger: GCCATGCTGCAGTCCGCACAAGCTGTGAGGCAGAAA...AGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp CATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTTCAGCAGCTGTGCTGTCATAGCGCAGTaGTCCTCCTGTCTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: HNARGCGITSRADLFSSCAVIAQ*SSCLWV
Trigger: AACCCACAGACAGGAGGACAACTGCGCTATGACAGC...ACAGCTGCTGAACAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTGGCGTCTGCGCTGTTTaGCACAACCATGGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIGVCAV*HNHGGR
Trigger: TCTGCCGCCATGGTTGTGCAAAACAGCGCAGACGCC...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGCTCTCCTTCACTGGGTaGGCAACCAAGCTGAGATGG +
Preference number: 5 (lower is better)
Translates to: AALEHNARGCGITSRADLLSFTG*ATKLRW
Trigger: CCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAG...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp AACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTTATCCTGGCTGCCAACAGGTCTCTATTaGAGATCTATAGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: NLGCPLQCTPEGATLSWLPTGLY*RSIAQK
Trigger: CTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGG...CAGCCAGGATAAAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCGCAGTGGAAACTCCCTaGCCCCTGGACTTGGACGGA +
Preference number: 5 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVAVETP*PLDLDG
Trigger: TCCGTCCAAGTCCAGGGGCAAGGGAGTTTCCACTGC...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS-3UTR CAA 90 bp GGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCACTCTCCTTCACTGGGTaGGCAACCAAGCTGAGATGG +
Preference number: 5 (lower is better)
Translates to: GVWTTLATNRSLFEIYSPLSFTG*ATKLRW
Trigger: CCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAG...TGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCGACTCTGTGGAGACCTaGAAGGGCTCCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPDSVET*KGSWLS
Trigger: GGAGAGCCAGGAGCCCTTCAAGGTCTCCACAGAGTC...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp CAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAATCCAGATAAGCCCCAGGGCCCAGGAATCTaGTCTCTCAGTGCCCACCAT +
Preference number: 5 (lower is better)
Translates to: QPTGLYLRSIAQKNPDKPQGPGI*SLSAHH
Trigger: ATGGTGGGCACTGAGAGACAAGATTCCTGGGCCCTG...GGGCTTATCTGGATTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTACTGTGACGGTACCTTaGTACTGTGGGGTGAACCGC +
Preference number: 5 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSITVTVP*YCGVNR
Trigger: GCGGTTCACCCCACAGTACAAAGGTACCGTCACAGT...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp AATGTGGCAGAATGGGGAACTCCAAAGTCTGCTAAGAGATTCCTCATTTTAAGAGACCTCAGAAGAGCCTaGGCCGGGCTCTCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: NVAEWGTPKSAKRFLILRDLRRA*AGLSLG
Trigger: ACCCAAGGAGAGCCCGGCCAAGGCTCTTCTGAGGTC...TCTTAAAATGAGGAATCTCTTAGCAGACTTTGGAGTTCCCCATTCTGCCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp ATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCTCTATTAAGAACCGATGCCGCTaGTTCTCTGGGTACTCGGAG +
Preference number: 5 (lower is better)
Translates to: MKTSKGCLDYPSNQQVSIKNRCR*FSGYSE
Trigger: CTCCGAGTACCCAGAGAACAAGCGGCATCGGTTCTT...AATAGAGACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp GTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACATGCGGATGTCAACCTaGGTGAGACCACCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: VDRTIMKTSKGCLDYPSNMRMST*VRPPGE
Trigger: CTCTCCCGGTGGTCTCACCAAGGTTGACATCCGCAT...GTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TGCTGGCCTCTAACTTGGGCTGCCCCCTCCAGTGTACTCCAGAAGGTGCCACTTATTCCATATTTACACTaGTCCACCAGTCTTGTAAAC +
Preference number: 5 (lower is better)
Translates to: CWPLTWAAPSSVLQKVPLIPYLH*STSLVN
Trigger: GTTTACAAGACTGGTGGACAAGTGTAAATATGGAAT...AAGTGGCACCTTCTGGAGTACACTGGAGGGGGCAGCCCAAGTTAGAGGCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp TTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCAACGTATCTCAGTGCTaGACTCAAGGGCATCGTAAT +
Preference number: 5 (lower is better)
Translates to: FLCAFTPTASRVSWSECGNVSQC*TQGHRN
Trigger: ATTACGATGCCCTTGAGTCAAGCACTGAGATACGTT...GCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp CCTGTAAAGGGACCCTCCTTTCCACAGGCAAAAATGGAGAATCTGGGGTCTTGCCCAACAGGTCTCTATTaGAGATCTATAGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: PVKGPSFPQAKMENLGSCPTGLY*RSIAQK
Trigger: CTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGG...GCAAGACCCCAGATTCTCCATTTTTGCCTGTGGAAAGGAGGGTCCCTTTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp TTTTTATGTGCGTTCACCCCCACTGCAAGCCGCGTCTCATGGTCAGAATGTGGCTCAACTTTCTCCTTCTaGGCCTTTATTGCTGTCATA +
Preference number: 5 (lower is better)
Translates to: FLCAFTPTASRVSWSECGSTFSF*AFIAVI
Trigger: TATGACAGCAATAAAGGCCAAGAAGGAGAAAGTTGA...GCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGTGAACGCACATAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp TTGAAGGTAGATAGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAAGAACCGATGCCGCTaGTTCTCTGGGTACTCGGAG +
Preference number: 5 (lower is better)
Translates to: LKVDRTIMKTSKGCLDYPKNRCR*FSGYSE
Trigger: CTCCGAGTACCCAGAGAACAAGCGGCATCGGTTCTT...AGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCTATCTACCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp CCTGTAAAGGGACCCTCCTTTCCACAGGCAAAAATGGAGAATCTGGGGTCTTGCGTACTTCTTATCTGTTaGATAAACCTGCATGCCGCA +
Preference number: 5 (lower is better)
Translates to: PVKGPSFPQAKMENLGSCVLLIC*INLHAA
Trigger: TGCGGCATGCAGGTTTATCAAACAGATAAGAAGTAC...GCAAGACCCCAGATTCTCCATTTTTGCCTGTGGAAAGGAGGGTCCCTTTACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS-3UTR CAA 90 bp AGGACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTTTCATTCTCCCTCTaGGATATCCTGCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: RTIMKTSKGCLDYPSNQQVSFSL*DILQDP
Trigger: AGGATCCTGCAGGATATCCAAGAGGGAGAATGAAAC...CTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp ACTATTATGAAGACATCTAAGGGGTGTCTGGACTACCCTAGCAACCAACAGGTCGTTTCATTCTCCCTCTaGGATATCCTGCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: TIMKTSKGCLDYPSNQQVVSFSL*DILQDP
Trigger: AGGATCCTGCAGGATATCCAAGAGGGAGAATGAAAC...GACCTGTTGGTTGCTAGGGTAGTCCAGACACCCCTTAGATGTCTTCATAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp GCAGCATTAGAGCATAATGCCAGGGGATGTGGAATCACCTCCAGAGCTGATTTGTCAACTTTCTCCTTCTaGGCCTTTATTGCTGTCATA +
Preference number: 5 (lower is better)
Translates to: AALEHNARGCGITSRADLSTFSF*AFIAVI
Trigger: TATGACAGCAATAAAGGCCAAGAAGGAGAAAGTTGA...CAAATCAGCTCTGGAGGTGATTCCACATCCCCTGGCATTATGCTCTAATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS-3UTR CAA 90 bp TGGACTACCCTAGCAACCAACAGGTCTCTATTTGAGATCTATAGCCCAGAAGAAGTACTTCTTATCTGTTaGATAAACCTGCATGCCGCA +
Preference number: 5 (lower is better)
Translates to: WTTLATNRSLFEIYSPEEVLLIC*INLHAA
Trigger: TGCGGCATGCAGGTTTATCAAACAGATAAGAAGTAC...TTCTTCTGGGCTATAGATCTCAAATAGAGACCTGTTGGTTGCTAGGGTAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp GCCTTGGCCGGGCTCTCCTTGGGTGAGCGTGCCAGCTaGGCATGCGGCCACTGGGCAAGGGTGCAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: ALAGLSLGERAS*ACGHWARVQSL
Trigger: CAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGCTGGCACGCTCACCCAAGGAGAGCCCGGCCAAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp GCCAGCTGGGCATGCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATaGCTGCCGGTGGTCTGCTGGAGCGTCTGCCATATGGCCACCGCC +
Preference number: 6 (lower is better)
Translates to: ASWACGHWARVQSLP*LPVVCWSVCHMATA
Trigger: GGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS TCA 72 bp CCGGGAGAGCTACCGTGGGCTGCCTGGGGAGCCTCGTaGGGATGCGGGCTGCCTGGGGCTCTTTCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: PGELPWAAWGAS*GCGLPGALSGG
Trigger: ACCACCAGAAAGAGCCCCAGGCAGCCCGCATCCTCACGAGGCTCCCCAGGCAGCCCACGGTAGCTCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp GCTGGGCATGCGGCCACTGGGCAAGGGTGCAGTCGCTaGCATTGCTGCCGGTGGTCTGCTGGAGCGTCTGCC +
Preference number: 6 (lower is better)
Translates to: AGHAATGQGCSR*HCCRWSAGASA
Trigger: GGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp GCCGGGCTCTCCTTGGGTGAGCGTGCCAGCTGGGCATaGGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTG +
Preference number: 6 (lower is better)
Translates to: AGLSLGERASWA*GHWARVQSLPL
Trigger: CAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGCCCAGCTGGCACGCTCACCCAAGGAGAGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp GCAAGGGTGCAGTCGCTGCCATTGCTGCCGGTGGTCTaGTGGAGCGTCTGCCATATGGCCACCGCCGCCGAC +
Preference number: 6 (lower is better)
Translates to: ARVQSLPLLPVV*WSVCHMATAAD
Trigger: GTCGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp AACCTTGGTGAGACCACCGGGAGAGCTACCGTGGGCTaGCTGGGGAGCCTCGTGAGGATGCGGGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: NLGETTGRATVG*LGSLVRMRAAW
Trigger: CCAGGCAGCCCGCATCCTCACGAGGCTCCCCAGGCAGCCCACGGTAGCTCTCCCGGTGGTCTCACCAAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp TCGCTGCCATTGCTGCCGGTGGTCTGCTGGAGCGTCTaGCATATGGCCACCGCCGCCGACTCTGTGGAGACC +
Preference number: 6 (lower is better)
Translates to: SLPLLPVVCWSV*HMATAADSVET
Trigger: GGTCTCCACAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp GCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTGCTaGCGGTGGTCTGCTGGAGCGTCTGCCATATGGCCA +
Preference number: 6 (lower is better)
Translates to: AATGQGCSRCHC*RWSAGASAIWP
Trigger: TGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp AGGGTGCAGTCGCTGCCATTGCTGCCGGTGGTCTGCTaGAGCGTCTGCCATATGGCCACCGCCGCCGACTCT +
Preference number: 6 (lower is better)
Translates to: RVQSLPLLPVVC*SVCHMATAADS
Trigger: AGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp ACTGGGCAAGGGTGCAGTCGCTGCCATTGCTGCCGGTaGTCTGCTGGAGCGTCTGCCATATGGCCACCGCCG +
Preference number: 6 (lower is better)
Translates to: TGQGCSRCHCCR*SAGASAIWPPP
Trigger: CGGCGGTGGCCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp TGTGGGTTCTCAGCGGGGTCCTCTCCACGAAGACGCTaGCACCTCCGTGGGGCAGACTCCTGGCCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: CGFSAGSSPRRR*HLRGADSWPAR
Trigger: TCTGGCTGGCCAGGAGTCTGCCCCACGGAGGTGCCAGCGTCTTCGTGGAGAGGACCCCGCTGAGAACCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634274.1
CDS CAA 72 bp CACGCCTGCCCTCATGTCCCCGGCGTCTGCGCTGTTTaGCACAACCATGGCGGCAGATGGTGGTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: HACPHVPGVCAV*HNHGGRWWWWG
Trigger: CCCCCACCACCACCATCTGCCGCCATGGTTGTGCAAAACAGCGCAGACGCCGGGGACATGAGGGCAGGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS GCA 72 bp CTCCAGCTGCACGCCTGCCCTCATGTCCCCGGCGTCTaGGCTGTTTTGCACAACCATGGCGGCAGATGGTGG +
Preference number: 6 (lower is better)
Translates to: LQLHACPHVPGV*AVLHNHGGRWW
Trigger: CCACCATCTGCCGCCATGGTTGTGCAAAACAGCGCAGACGCCGGGGACATGAGGGCAGGCGTGCAGCTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS GCA 72 bp CATGCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATTaGTGCCGGTGGTCTGCTGGAGCGTCTGCCATATGG +
Preference number: 6 (lower is better)
Translates to: HAATGQGCSRCH*CRWSAGASAIW
Trigger: CCATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp TCGGAGCACAGGCGGGTCAGGTGGGCCTGGTGGCATTaGAGGCCCCACGGGTTGAAGCTCTTCCTCTCAACC +
Preference number: 6 (lower is better)
Translates to: SEHRRVRWAWWH*RPHGLKLFLST
Trigger: GGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTGCTCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 72 bp GCATGCGGCCACTGGGCAAGGGTGCAGTCGCTGCCATaGCTGCCGGTGGTCTGCTGGAGCGTCTGCCATATG +
Preference number: 6 (lower is better)
Translates to: ACGHWARVQSLP*LPVVCWSVCHM
Trigger: CATATGGCAGACGCTCCAGCAGACCACCGGCAGCAATGGCAGCGACTGCACCCTTGCCCAGTGGCCGCATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 72 bp CTCGGAGCACAGGCGGGTCAGGTGGGCCTGGTGGCATaGCAGGCCCCACGGGTTGAAGCTCTTCCTCTCAAC +
Preference number: 6 (lower is better)
Translates to: LGAQAGQVGLVA*QAPRVEALPLN
Trigger: GTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTGCTCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp GTGTCTTCCACCAGCGAGAAGGCTGGAGTGTTGAGGTaGGGCTCGGACCTCAGAAGAGCCTTGGCCGGGCTC +
Preference number: 6 (lower is better)
Translates to: VSSTSEKAGVLR*GSDLRRALAGL
Trigger: GAGCCCGGCCAAGGCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp TTGTTCTCTGGGTACTCGGAGCACAGGCGGGTCAGGTaGGCCTGGTGGCATTGCAGGCCCCACGGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: LFSGYSEHRRVR*AWWHCRPHGLK
Trigger: CTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTGCTCCGAGTACCCAGAGAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp CTCTGGGTACTCGGAGCACAGGCGGGTCAGGTGGGCCTGGTGGCATaGCAGGCCCCACGGGTTGAAGCTCTTCCTCTCAACCTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: LWVLGAQAGQVGLVA*QAPRVEALPLNLVS
Trigger: GGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTGCTCCGAGTACCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp TGGAGCGTCTGCCATATGGCCACCGCCGCCGACTCTGTGGAGACCTaGAAGGGCTCCTGGCTCTCCTTCACTGGGTTGGCAACCAAGCTG +
Preference number: 6 (lower is better)
Translates to: WSVCHMATAADSVET*KGSWLSFTGLATKL
Trigger: CAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAGGAGCCCTTCAAGGTCTCCACAGAGTCGGCGGCGGTGGCCATATGGCAGACGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp ACCTGGTTTCCGTTGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTaGAGGTGGGGCTCGGACCTCAGAAGAGCCTTGGCCGGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: TWFPLVSSTSEKAGV*RWGSDLRRALAGLS
Trigger: GGAGAGCCCGGCCAAGGCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp CACAGGCGGGTCAGGTGGGCCTGGTGGCATTGCAGGCCCCACGGGTaGAAGCTCTTCCTCTCAACCTGGTTTCCGTTGGTGTCTTCCACC +
Preference number: 6 (lower is better)
Translates to: HRRVRWAWWHCRPHG*KLFLSTWFPLVSST
Trigger: GGTGGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGACCCGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS TCA 72 bp CGTTGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTTaGGGTGGGGCTCGGACCTCAGAAGAGCCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: RWCLPPARRLEC*GGARTSEEPWP
Trigger: CGGCCAAGGCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp CCATGTACAGGCATCAGGCAATGGCCCGTCCCAGCGTaGAGCATTTGCTGTTCACCAGAGCCCTGGTGCGGG +
Preference number: 6 (lower is better)
Translates to: PCTGIRQWPVPA*SICCSPEPWCG
Trigger: CCCGCACCAGGGCTCTGGTGAACAGCAAATGCTCCACGCTGGGACGGGCCATTGCCTGATGCCTGTACATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp AGGCAGGCTGAGGTGCTCTGCGCACACTTCCTCATGTaGCGGGCCTTCTTCTCCTCCGATGCATCATCGCCG +
Preference number: 6 (lower is better)
Translates to: RQAEVLCAHFLM*RAFFSSDASSP
Trigger: CGGCGATGATGCATCGGAGGAGAAGAAGGCCCGCCACATGAGGAAGTGTGCGCAGAGCACCTCAGCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp GAGCAGGGAAGACCCCTGGGCCTTCAGTGCAGCCTGTaGCACAGCAGTGGAAACTCCCTTGCCCCTGGACTT +
Preference number: 6 (lower is better)
Translates to: EQGRPLGLQCSL*HSSGNSLAPGL
Trigger: AAGTCCAGGGGCAAGGGAGTTTCCACTGCTGTGCCACAGGCTGCACTGAAGGCCCAGGGGTCTTCCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS CAA 72 bp CCGTTGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTaGAGGTGGGGCTCGGACCTCAGAAGAGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: PLVSSTSEKAGV*RWGSDLRRALA
Trigger: GGCCAAGGCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp CAGACTCCTGGCCAGCCAGAGCTTCCTCCGAGATCGTaGGGAGTGTATGGAAGGCAGGGCCCAGGAATCTTG +
Preference number: 6 (lower is better)
Translates to: QTPGQPELPPRS*GVYGRQGPGIL
Trigger: CAAGATTCCTGGGCCCTGCCTTCCATACACTCCCCACGATCTCGGAGGAAGCTCTGGCTGGCCAGGAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634274.1
CDS CAA 72 bp GTCAGGTGGGCCTGGTGGCATTGCAGGCCCCACGGGTaGAAGCTCTTCCTCTCAACCTGGTTTCCGTTGGTG +
Preference number: 6 (lower is better)
Translates to: VRWAWWHCRPHG*KLFLSTWFPLV
Trigger: CACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp CCTCCGAGATCGTGGGGAGTGTATGGAAGGCAGGGCCCAGGAATCTaGTCTCTCAGTGCCCACCATGTACAGGCATCAGGCAATGGCCCG +
Preference number: 6 (lower is better)
Translates to: PPRSWGVYGRQGPGI*SLSAHHVQASGNGP
Trigger: CGGGCCATTGCCTGATGCCTGTACATGGTGGGCACTGAGAGACAAGATTCCTGGGCCCTGCCTTCCATACACTCCCCACGATCTCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp TGCAGGCCCCACGGGTTGAAGCTCTTCCTCTCAACCTGGTTTCCGTaGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTTGAGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: CRPHGLKLFLSTWFP*VSSTSEKAGVLRWG
Trigger: GCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS TCA 72 bp TCAGGTGGGCCTGGTGGCATTGCAGGCCCCACGGGTTaGAGCTCTTCCTCTCAACCTGGTTTCCGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: SGGPGGIAGPTG*SSSSQPGFRWC
Trigger: ACACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCAATGCCACCAGGCCCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp TTCTCAGCGGGGTCCTCAGAGCTTCCTCCGAGATCGTaGGGAGTGTATGGAAGGCAGGGCCCAGGAATCTTG +
Preference number: 6 (lower is better)
Translates to: FSAGSSELPPRS*GVYGRQGPGIL
Trigger: CAAGATTCCTGGGCCCTGCCTTCCATACACTCCCCACGATCTCGGAGGAAGCTCTGAGGACCCCGCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293756.5
CDS CCA 72 bp CTGGTTTCCGTTGGTGTCTTCCACCAGCGAGAAGGCTaGAGTGTTGAGGTGGGGCTCGGACCTCAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LVSVGVFHQREG*SVEVGLGPQKS
Trigger: GCTCTTCTGAGGTCCGAGCCCCACCTCAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 72 bp GCAGTGGAAACTCCCTTGCCCCTGGACTTGGACGGATaGGCAGCGATTGTCTACCAGGTAGCCAGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: AVETPLPLDLDG*AAIVYQVASQS
Trigger: GCTCTGGCTGGCTACCTGGTAGACAATCGCTGCCAATCCGTCCAAGTCCAGGGGCAAGGGAGTTTCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS CAA 90 bp GACTCTGTGGAGACCTTGAAGGGCTCCTGGCTCTCCTTCACTGGGTaGGCAACCAAGCTGAGATGGCCTGTGCTGTCTTTCCAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: DSVETLKGSWLSFTG*ATKLRWPVLSFQRC
Trigger: GCACCTCTGGAAAGACAGCACAGGCCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAGGAGCCCTTCAAGGTCTCCACAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS TCA 72 bp GCTCCTGGCTCTCCTTCACTGGGTTGGCAACCAAGCTaGGATGGCCTGTGCTGTCTTTCCAGAGGTGCACTG +
Preference number: 6 (lower is better)
Translates to: APGSPSLGWQPS*DGLCCLSRGAL
Trigger: CAGTGCACCTCTGGAAAGACAGCACAGGCCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp GTCTCTCAGTGCCCACCATGTACAGGCATCAGGCAATaGCCCGTCCCAGCGTGGAGCATTTGCTGTTCACCA +
Preference number: 6 (lower is better)
Translates to: VSQCPPCTGIRQ*PVPAWSICCSP
Trigger: TGGTGAACAGCAAATGCTCCACGCTGGGACGGGCCATTGCCTGATGCCTGTACATGGTGGGCACTGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp GCTGTTTTGCACAACCATGGCGGCAGATGGTGGTGGTaGGGGGTCCCTGCACAGTCTGCTAGAGGAAGGTTT +
Preference number: 6 (lower is better)
Translates to: AVLHNHGGRWWW*GVPAQSARGRF
Trigger: AAACCTTCCTCTAGCAGACTGTGCAGGGACCCCCCACCACCACCATCTGCCGCCATGGTTGTGCAAAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS CCA 72 bp TGCAGGCCCCACGGGTTGAAGCTCTTCCTCTCAACCTaGTTTCCGTTGGTGTCTTCCACCAGCGAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: CRPHGLKLFLST*FPLVSSTSEKA
Trigger: AGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTGGGGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp ATTTTCCAGCAACAAGAACCGATGCCGCTTGTTCTCTaGGTACTCGGAGCACAGGCGGGTCAGGTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: IFQQQEPMPLVL*VLGAQAGQVGL
Trigger: CAGGCCCACCTGACCCGCCTGTGCTCCGAGTACCCAGAGAACAAGCGGCATCGGTTCTTGTTGCTGGAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp CTCGTGAGGATGCGGGCTGCCTGGGGCTCTTTCTGGTaGTTCCTGCCCATCATAGATGACAAGGAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: LVRMRAAWGSFW*FLPIIDDKERA
Trigger: AGCTCTCTCCTTGTCATCTATGATGGGCAGGAACCACCAGAAAGAGCCCCAGGCAGCCCGCATCCTCACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp AGCCTCGTGAGGATGCGGGCTGCCTGGGGCTCTTTCTaGTGGTTCCTGCCCATCATAGATGACAAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: SLVRMRAAWGSF*WFLPIIDDKER
Trigger: TCTCTCCTTGTCATCTATGATGGGCAGGAACCACCAGAAAGAGCCCCAGGCAGCCCGCATCCTCACGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 72 bp TGTGGCACAGCAGTGGAAACTCCCTTGCCCCTGGACTaGGACGGATTGGCAGCGATTGTCTACCAGGTAGCC +
Preference number: 6 (lower is better)
Translates to: CGTAVETPLPLD*DGLAAIVYQVA
Trigger: GGCTACCTGGTAGACAATCGCTGCCAATCCGTCCAAGTCCAGGGGCAAGGGAGTTTCCACTGCTGTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451316.6
CDS CAA 72 bp GAGACCTTGAAGGGCTCCTGGCTCTCCTTCACTGGGTaGGCAACCAAGCTGAGATGGCCTGTGCTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: ETLKGSWLSFTG*ATKLRWPVLSF
Trigger: GAAAGACAGCACAGGCCATCTCAGCTTGGTTGCCAACCCAGTGAAGGAGAGCCAGGAGCCCTTCAAGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 90 bp CCCAACAGCACACGGGGCTGTCAGCGGTCCTCAACTTTCTCCTTCTaGGCCTTTATTGCTGTCATAGCGCAGTTGTCCTCCTGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: PNSTRGCQRSSTFSF*AFIAVIAQLSSCLW
Trigger: CCACAGACAGGAGGACAACTGCGCTATGACAGCAATAAAGGCCAAGAAGGAGAAAGTTGAGGACCGCTGACAGCCCCGTGTGCTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS CAA 72 bp CACGGGTTGAAGCTCTTCCTCTCAACCTGGTTTCCGTaGGTGTCTTCCACCAGCGAGAAGGCTGGAGTGTTG +
Preference number: 6 (lower is better)
Translates to: HGLKLFLSTWFP*VSSTSEKAGVL
Trigger: CAACACTCCAGCCTTCTCGCTGGTGGAAGACACCAACGGAAACCAGGTTGAGAGGAAGAGCTTCAACCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp ATTCATAGAACCTCTGCTCCCGGGAGACGAGGGGCTTaGACACCGTATGCTCGTCATACTTCATCACGCTCA +
Preference number: 6 (lower is better)
Translates to: IHRTSAPGRRGA*TPYARHTSSRS
Trigger: TGAGCGTGATGAAGTATGACGAGCATACGGTGTGCAAGCCCCTCGTCTCCCGGGAGCAGAGGTTCTATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS GCA 72 bp ACCAAGCTGAGATGGCCTGTGCTGTCTTTCCAGAGGTaGACTGTGACGGTACCTTTGTACTGTGGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: TKLRWPVLSFQR*TVTVPLYCGVN
Trigger: GTTCACCCCACAGTACAAAGGTACCGTCACAGTGCACCTCTGGAAAGACAGCACAGGCCATCTCAGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CAA 72 bp TTCTCCTTCTTGGCCTTTATTGCTGTCATAGCGCAGTaGTCCTCCTGTCTGTGGGTTCTCAGCGGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: FSFLAFIAVIAQ*SSCLWVLSGVL
Trigger: GAGGACCCCGCTGAGAACCCACAGACAGGAGGACAACTGCGCTATGACAGCAATAAAGGCCAAGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS CAA 72 bp ACACGGGGCTGTCAGCGGTCCTCAACTTTCTCCTTCTaGGCCTTTATTGCTGTCATAGCGCAGTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: TRGCQRSSTFSF*AFIAVIAQLSS
Trigger: GGAGGACAACTGCGCTATGACAGCAATAAAGGCCAAGAAGGAGAAAGTTGAGGACCGCTGACAGCCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293756.5
ENST00000451316.6
ENST00000634274.1
CDS CCA 72 bp GGCCAAAAATATAGCCAGGGTCTGGTCCATCGTAGGTaGTGTGCTCATTCCAGTAGCCCTTGTATGTGGTAT +
Preference number: 6 (lower is better)
Translates to: GQKYSQGLVHRR*CAHSSSPCMWY
Trigger: ATACCACATACAAGGGCTACTGGAATGAGCACACCACCTACGATGGACCAGACCCTGGCTATATTTTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS CCA 72 bp AATCCAGATAAGCCCAGGAAGTTTCATTCTCCCTCTTaGATATCCTGCAGGATCCTGATGAGGTTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: NPDKPRKFHSPS*ISCRILMRFSR
Trigger: CCTGGAAAACCTCATCAGGATCCTGCAGGATATCCAAGAGGGAGAATGAAACTTCCTGGGCTTATCTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6
CDS GCA 72 bp CCTCCACTGAGAGTTTTCTTCCATAGTACTTGTCTTTaGAGAGAAAGTACTTCTTATCTGTTTGATAAACCT +
Preference number: 6 (lower is better)
Translates to: PPLRVFFHSTCL*RESTSYLFDKP
Trigger: AGGTTTATCAAACAGATAAGAAGTACTTTCTCTGCAAAGACAAGTACTATGGAAGAAAACTCTCAGTGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293756.5
ENST00000451316.6