RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IP6K1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176095

Ensembl transcript IDs: ENST00000321599.9, ENST00000395238.5, ENST00000460540.1, ENST00000468463.5, ENST00000479464.1, ENST00000495152.1, ENST00000495798.1, ENST00000498149.1, ENST00000613416.4

Found 763 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCAACTaGGGCGGGAGCCACCGGCGCAGGCCTCGGGCGGTGGAGACAGGC +
Preference number: 1 (lower is better)
Translates to: PSTPSPARKVQSKRN*GGSHRRRPRAVETG
Trigger: GCCTGTCTCCACCGCCCGAGGCCTGCGCCGGTGGCTCCCGCCGCAGTTGCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 90 bp GAGAGGAGGGACCCGCCTCGGGGCTGGTGTTGCTGGGGCTGGTGCTaGGGCCACAGGATGACGCCACCTCAGGGAGCACCATGTCCAGGT +
Preference number: 1 (lower is better)
Translates to: ERRDPPRGWCCWGWC*GHRMTPPQGAPCPG
Trigger: ACCTGGACATGGTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAGCACCAGCCCCAGCAACACCAGCCCCGAGGCGGGTCCCTCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR TCA 90 bp GGCCACAGGATGACGCCACCTCAGGGAGCACCATGTCCAGGTGCTTaGGACGCATCTCAGACCGGCGGTCCAGGCAGGACTCAGCCCGGC +
Preference number: 1 (lower is better)
Translates to: GHRMTPPQGAPCPGA*DASQTGGPGRTQPG
Trigger: GCCGGGCTGAGTCCTGCCTGGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAGGTGGCGTCATCCTGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR GCA 90 bp CTGGGGCCACAGGATGACGCCACCTCAGGGAGCACCATGTCCAGGTaGTTGAGACGCATCTCAGACCGGCGGTCCAGGCAGGACTCAGCC +
Preference number: 1 (lower is better)
Translates to: LGPQDDATSGSTMSR*LRRISDRRSRQDSA
Trigger: GGCTGAGTCCTGCCTGGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR CCA 90 bp TCAGGAATAGGACAGGTGCCAACCTGTCACGTGCCAACAGGTGCCTaGGGAACCCAGGCGCCGCCCTCTGCCATAAGTTGGCCTCAGCCC +
Preference number: 1 (lower is better)
Translates to: SGIGQVPTCHVPTGA*GTQAPPSAISWPQP
Trigger: GGGCTGAGGCCAACTTATGGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCACCTGTCCTATTCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 90 bp AGGGCCAAGAGCGCCTCACAAAGGGCTGCTGCCTTGAACTTGGCCTaGGGAAATGAGACCCTGAGCGGACCACAGCCCTTGAGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: RAKSASQRAAALNLA*GNETLSGPQPLSPG
Trigger: CCCAGGGCTCAAGGGCTGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCGCTCTTGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 90 bp CCCAGCCCCAAAGAATGGGAACCTGCCCACCAGTGGCACCAGGGCTaGGGGCTAGGAGAGATGGCATCCATCAAGGAGCCCTTAAGAGGC +
Preference number: 1 (lower is better)
Translates to: PSPKEWEPAHQWHQG*GLGEMASIKEPLRG
Trigger: GCCTCTTAAGGGCTCCTTGATGGATGCCATCTCTCCTAGCCCCCAGCCCTGGTGCCACTGGTGGGCAGGTTCCCATTCTTTGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 90 bp TGTTTCAGGAATAGGACAGGTGCCAACCTGTCACGTGCCAACAGGTaGCTGGGGAACCCAGGCGCCGCCCTCTGCCATAAGTTGGCCTCA +
Preference number: 1 (lower is better)
Translates to: CFRNRTGANLSRANR*LGNPGAALCHKLAS
Trigger: TGAGGCCAACTTATGGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCACCTGTCCTATTCCTGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR TCA 90 bp TTCCTTCCTAAGGCAGCCTGGACACACCAGTCAGAGCCACAAAGCTaGGGAGCCTGGCTGAGAGGGCGTGTGGTCTGCCCTCCTTCACTT +
Preference number: 1 (lower is better)
Translates to: FLPKAAWTHQSEPQS*GAWLRGRVVCPPSL
Trigger: AAGTGAAGGAGGGCAGACCACACGCCCTCTCAGCCAGGCTCCTCAGCTTTGTGGCTCTGACTGGTGTGTCCAGGCTGCCTTAGGAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 90 bp GATCTAGACAAGAGAAACCAATGTCCAAGGGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCACCTCTTCCTTCCTAAGGCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: DLDKRNQCPRAPCPC*QAHQGHLFLPKAAW
Trigger: CCAGGCTGCCTTAGGAAGGAAGAGGTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGCCCTTGGACATTGGTTTCTCTTGTCTAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 90 bp AAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTaGAGTGGAGAGGAAGGGGTTCTGGGGGCCCAGAACAGGGCCTAC +
Preference number: 1 (lower is better)
Translates to: KSVCPHGKFRTMVPA*SGEEGVLGAQNRAY
Trigger: GTAGGCCCTGTTCTGGGCCCCCAGAACCCCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR GCA 90 bp TCTAGCCCCATGCTAAGGTCAGACCGAAGGATGGGTCCAGCTTTGTaGAGTCAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTA +
Preference number: 1 (lower is better)
Translates to: SSPMLRSDRRMGPAL*SQPCGALRAPIKEL
Trigger: TAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTGACTGCACAAAGCTGGACCCATCCTTCGGTCTGACCTTAGCATGGGGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR TCA 90 bp TGCCAGGAAAATACTGAATGTAAGTGGGTGCAGCTTTGCTCGCTGTaGGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCAGAATCGAGGA +
Preference number: 1 (lower is better)
Translates to: CQENTECKWVQLCSL*GAAECGSLSSQNRG
Trigger: TCCTCGATTCTGGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCCACTTACATTCAGTATTTTCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR TCA 90 bp CCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCAACCCATaGTCCCATGTTGCACTTTGTTCCCAAGTTGGGGCTAAGAAGGCT +
Preference number: 1 (lower is better)
Translates to: PGKHYREGSPEHPNP*SHVALCSQVGAKKA
Trigger: AGCCTTCTTAGCCCCAACTTGGGAACAAAGTGCAACATGGGATCATGGGTTGGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 90 bp GGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTaGAGCCACAGATCTCAAAGATCTAGACAAGAGAAACCAATGTCC +
Preference number: 1 (lower is better)
Translates to: GPAPAQGFTLQSAGP*SHRSQRSRQEKPMS
Trigger: GGACATTGGTTTCTCTTGTCTAGATCTTTGAGATCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 90 bp AGGGCTCTCTGGCATGGGGCAGGGAGAAAGCAGTGGCAGACAGTATaGACACACACTTGCCCACTACCATTAAATAACAGGGCTGGGTCT +
Preference number: 1 (lower is better)
Translates to: RALWHGAGRKQWQTV*THTCPLPLNNRAGS
Trigger: AGACCCAGCCCTGTTATTTAATGGTAGTGGGCAAGTGTGTGTGCATACTGTCTGCCACTGCTTTCTCCCTGCCCCATGCCAGAGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 90 bp GAGAGGGTGCTAACCTTGGCAATGGCTGAAATCGGTGTCACCTCCTaGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: ERVLTLAMAEIGVTS*PSVRSSRSVPLRAG
Trigger: GCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGAGGTGACACCGATTTCAGCCATTGCCAAGGTTAGCACCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 90 bp TGCCCCACTCTAAGGGTTGAGGGCCATATTCTAGGCCCACAGAAATaGTGCTGGGTCAACAGGGAAACACCAATTTATTCTGCTATCAGG +
Preference number: 1 (lower is better)
Translates to: CPTLRVEGHILGPQK*CWVNRETPIYSAIR
Trigger: CCTGATAGCAGAATAAATTGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAGAATATGGCCCTCAACCCTTAGAGTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 90 bp CCCACTCTAAGGGTTGAGGGCCATATTCTAGGCCCACAGAAATGGTaGTGGGTCAACAGGGAAACACCAATTTATTCTGCTATCAGGTCT +
Preference number: 1 (lower is better)
Translates to: PTLRVEGHILGPQKW*WVNRETPIYSAIRS
Trigger: AGACCTGATAGCAGAATAAATTGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAGAATATGGCCCTCAACCCTTAGAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 90 bp TACCAGGGAATGACTATCTACACTAATGAAGGGCTACTGCCCCCATaGCTGAAGCCACAGAATGGTACAGGAGAGAAGACTGTAATTTGT +
Preference number: 1 (lower is better)
Translates to: YQGMTIYTNEGLLPP*LKPQNGTGEKTVIC
Trigger: ACAAATTACAGTCTTCTCTCCTGTACCATTCTGTGGCTTCAGCCATGGGGGCAGTAGCCCTTCATTAGTGTAGATAGTCATTCCCTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 90 bp ACTCTAAGGGTTGAGGGCCATATTCTAGGCCCACAGAAATGGTGCTaGGTCAACAGGGAAACACCAATTTATTCTGCTATCAGGTCTTTA +
Preference number: 1 (lower is better)
Translates to: TLRVEGHILGPQKWC*VNRETPIYSAIRSL
Trigger: TAAAGACCTGATAGCAGAATAAATTGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAGAATATGGCCCTCAACCCTTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGTCACGTGCCAACAGGTaGCTGGGGAACCCAGGCGCC +
Preference number: 2 (lower is better)
Translates to: DTSGAGSARCTERSGLGPSRANR*LGNPGA
Trigger: GGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGA...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp GGGCCACAGGATGACGCCACCTCAGGGAGCACCATGTCCAGGTGCTaGAGACGCATCTCAGACCGGCGGTCCAGGCAGGACTCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: GPQDDATSGSTMSRC*RRISDRRSRQDSAR
Trigger: CCGGGCTGAGTCCTGCCTGGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAGGTGGCGTCATCCTGTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR-3UTR TCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCTCAGAGCCACAAAGCTaGGGAGCCTGGCTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRSEPQS*GAWLRG
Trigger: CCCTCTCAGCCAGGCTCCTCAGCTTTGTGGCTCTGA...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTAPCPC*QAHQGH
Trigger: GTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGC...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp CCCTCCAGGCCCAGGGCCAAGAGCGCCTCACAAAGGGCTGCTGCCTaGAACTTGGCCTGGGGAAATGAGACCCTGAGCGGACCACAGCCC +
Preference number: 2 (lower is better)
Translates to: PSRPRAKSASQRAAA*NLAWGNETLSGPQP
Trigger: GGGCTGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCGCTCTTGGCCCTGGGCCTGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp CTGTCTGGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGGCTGGGGCCACAGGATaGCGCCACCTCAGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: LSGPSCTVGSSRKPLNVLAGATG*RHLREH
Trigger: GTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAGC...CAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCCAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGATGGGTCCAGCTTTGTaGAGTCAGCCCTGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: DTSGAGSARCTERSGLGPMGPAL*SQPCGA
Trigger: GGCACCACAGGGCTGACTGCACAAAGCTGGACCCAT...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGTGCCAACCTGTCACGTaGCAACAGGTGCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: DTSGAGSARCTERSGLGPCQPVT*QQVPGE
Trigger: TTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCA...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCCTTCCTAAGGCAGCCTaGACACACCAGTCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRLPKAA*THQSEP
Trigger: TGGCTCTGACTGGTGTGTCCAGGCTGCCTTAGGAAG...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp TTGAACTTGGCCTGGGGAAATGAGACCCTGAGCGGACCACAGCCCTaGAGCCCTGGGAGGAGCAGCCCATCCAGCAGCAGCACAGCTGCC +
Preference number: 2 (lower is better)
Translates to: LNLAWGNETLSGPQP*SPGRSSPSSSSTAA
Trigger: GGCAGCTGTGCTGCTGCTGGATGGGCTGCTCCTCCCAGGGCTCAAGGGCTGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp AGGCCCAGGGCCAAGAGCGCCTCACAAAGGGCTGCTGCCTTGAACTaGGCCTGGGGAAATGAGACCCTGAGCGGACCACAGCCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: RPRAKSASQRAAALN*AWGNETLSGPQPLS
Trigger: GCTCAAGGGCTGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCGCTCTTGGCCCTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGTCCTCAAGCCCTCACTaGCCCACTCTAAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: DTSGAGSARCTERSGLGPSSSPH*PTLRVE
Trigger: CTCAACCCTTAGAGTGGGGCAGTGAGGGCTTGAGGA...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCAGGGAAGAGTGGGCGTaGAGGGGCCCTGCACCAGCC +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSREEWA*RGPAPA
Trigger: GGCTGGTGCAGGGCCCCTCCACGCCCACTCTTCCCT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCCTAGGCCCACAGAAATaGTGCTGGGTCAACAGGGAA +
Preference number: 2 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRLGPQK*CWVNRE
Trigger: TTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAG...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCTCACGTGCCAACAGGTaGCTGGGGAACCCAGGCGCC +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSSRANR*LGNPGA
Trigger: GGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGA...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCGCCTCACAAAGGGCTaGTGCCTTGAACTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: GCSFARCEEQQNAAASPPRLTKG*CLELGL
Trigger: CAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCCTGAATGTAAGTGGGTaGAGCTTTGCTCGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRLNVSG*SFARCE
Trigger: CTCACAGCGAGCAAAGCTGCACCCACTTACATTCAG...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCTCATTAGCAGAATGTaGGCACCTGCACCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GCSFARCEEQQNAAASPPLISRM*APAPRA
Trigger: GGCCCTGGGTGCAGGTGCCCACATTCTGCTAATGAG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CTGTCTGGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGGTGTTGCTGGGGCTaGTGCTGGGGCCACAGGATG +
Preference number: 2 (lower is better)
Translates to: LSGPSCTVGSSRKPLNVLWCCWG*CWGHRM
Trigger: CATCCTGTGGCCCCAGCACCAGCCCCAGCAACACCA...CAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR-3UTR GCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACAGAACAATGGTCCCTaGCTGCAGTGGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTQNNGP*LQWRGR
Trigger: CCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPAPCPC*QAHQGH
Trigger: GTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGC...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTAGGGAAGAGTGGGCGTaGAGGGGCCCTGCACCAGCC +
Preference number: 2 (lower is better)
Translates to: THSTRTANTVWARATRGPREEWA*RGPAPA
Trigger: GGCTGGTGCAGGGCCCCTCCACGCCCACTCTTCCCT...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCGGAACAAGGGAAGAGTaGGCGTGGAGGGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSGTREE*AWRGPA
Trigger: TGCAGGGCCCCTCCACGCCCACTCTTCCCTTGTTCC...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGCCACAGAAATGGTGCTaGGTCAACAGGGAAACACCA +
Preference number: 2 (lower is better)
Translates to: DTSGAGSARCTERSGLGPPQKWC*VNRETP
Trigger: TGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGG...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCTCAGAGCCACAAAGCTaGGGAGCCTGGCTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: QPCGALRAPIKELADTHSSEPQS*GAWLRG
Trigger: CCCTCTCAGCCAGGCTCCTCAGCTTTGTGGCTCTGA...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCAGCCACCAGAGGCCCTaGGGCCTGCTAGGACACCGA +
Preference number: 2 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSSHQRP*GLLGHR
Trigger: TCGGTGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCT...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHAPCPC*QAHQGH
Trigger: GTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCACCAGGCGCCGCCCTCTaGCATAAGTTGGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPPGAAL*HKLASA
Trigger: GGCTGAGGCCAACTTATGGCAGAGGGCGGCGCCTGG...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAAGGGAAGAGTGGGCGTaGAGGGGCCCTGCACCAGCC +
Preference number: 2 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQREEWA*RGPAPA
Trigger: GGCTGGTGCAGGGCCCCTCCACGCCCACTCTTCCCT...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTGTGCCAACAGGTGCCTaGGGAACCCAGGCGCCGCCC +
Preference number: 2 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPVPTGA*GTQAPP
Trigger: GGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCAC...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACACCCACTTCAGTGGGGTaGGAGGGAGTGGCCTTCTTA +
Preference number: 2 (lower is better)
Translates to: LQILSGPEPPEALRPARTPTSVG*EGVAFL
Trigger: TAAGAAGGCCACTCCCTCCCACCCCACTGAAGTGGG...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCATCGGTGTCACCTCCTaGCCATCTGTTAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: GCSFARCEEQQNAAASPPIGVTS*PSVRSS
Trigger: GCTGCTTCTAACAGATGGCCAGGAGGTGACACCGAT...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACAGCCACCAGAGGCCCTaGGGCCTGCTAGGACACCGA +
Preference number: 2 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHSHQRP*GLLGHR
Trigger: TCGGTGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCT...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCACAGCTGCCGAAACTTaGGGAAGAAGACTCCCACCC +
Preference number: 2 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPTAAET*GRRLPP
Trigger: GGGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGT...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGACAGAACAATGGTCCCTaGCTGCAGTGGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRQNNGP*LQWRGR
Trigger: CCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTG...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCATGGGTCCAGCTTTGTaGAGTCAGCCCTGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSMGPAL*SQPCGA
Trigger: GGCACCACAGGGCTGACTGCACAAAGCTGGACCCAT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACCCAGGCGCCGCCCTCTaGCATAAGTTGGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHPGAAL*HKLASA
Trigger: GGCTGAGGCCAACTTATGGCAGAGGGCGGCGCCTGG...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCTGCCAACCTGTCACGTaGCAACAGGTGCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSCQPVT*QQVPGE
Trigger: TTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCA...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCCTCACAAAGGGCTGCTaGCTTGAACTTGGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSLTKGC*LELGLG
Trigger: CCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAG...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGCAGAATGTGGGCACCTaGACCCAGGGCCCATACCAC +
Preference number: 2 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRQNVGT*TQGPYH
Trigger: GTGGTATGGGCCCTGGGTGCAGGTGCCCACATTCTG...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGAACAAGGGAAGAGTaGGCGTGGAGGGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPGTREE*AWRGPA
Trigger: TGCAGGGCCCCTCCACGCCCACTCTTCCCTTGTTCC...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAGGTCAGACCGAAGGATaGGTCCAGCTTTGTGCAGTC +
Preference number: 2 (lower is better)
Translates to: LQILSGPEPPEALRPARTGQTEG*VQLCAV
Trigger: GACTGCACAAAGCTGGACCCATCCTTCGGTCTGACC...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCGGTCAGACCGAAGGATaGGTCCAGCTTTGTGCAGTC +
Preference number: 2 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPGQTEG*VQLCAV
Trigger: GACTGCACAAAGCTGGACCCATCCTTCGGTCTGACC...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGAGCCCTGTGGTGCCCTaGGGGCACCTATTAAAGAGC +
Preference number: 2 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRSPVVP*GHLLKS
Trigger: GCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCT...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCACAGCTGCCGAAACTTaGGGAAGAAGACTCCCACCC +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSTAAET*GRRLPP
Trigger: GGGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGCTTGGCCTGGGGAAATaGGACCCTGAGCGGACCACA +
Preference number: 2 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLLGLGK*DPERTT
Trigger: TGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAG...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCCAATCAGCAGGGCCCTaGAGCCACAGATCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPQSAGP*SHRSQR
Trigger: TCTTTGAGATCTGTGGCTGCAGGGCCCTGCTGATTG...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPASSEQ*SLPAVE
Trigger: CTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGC...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCACCCAGCCCCAAAGAATaGGAACCTGCCCACCAGTGG +
Preference number: 2 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPPSPKE*EPAHQW
Trigger: CCACTGGTGGGCAGGTTCCCATTCTTTGGGGCTGGG...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCAGCCCTGTGGTGCCCTaGGGGCACCTATTAAAGAGC +
Preference number: 2 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSSPVVP*GHLLKS
Trigger: GCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCT...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCCTCACAAAGGGCTGCTaGCTTGAACTTGGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSLTKGC*LELGLG
Trigger: CCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAG...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCGGAACAAGGGAAGAGTaGGCGTGGAGGGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: KKTPTHSTRTANTVWARAGTREE*AWRGPA
Trigger: TGCAGGGCCCCTCCACGCCCACTCTTCCCTTGTTCC...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGTGCCAACAGGTGCCTaGGGAACCCAGGCGCCGCCC +
Preference number: 2 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALVPTGA*GTQAPP
Trigger: GGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCAC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp CACTTCAGTGGGGTGGGAGGGAGTGGCCTTCTTAGGCAAGGGAACTaGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGT +
Preference number: 2 (lower is better)
Translates to: HFSGVGGSGLLRQGN*VREAVSGIGQVPTC
Trigger: ACAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGCCTAAGAAGGCCACTCCCTCCCACCCCACTGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp ACTATAGAGAGGGCTCACCTGAGCACCCCAACCCATGATCCCATGTaGCACTTTGTTCCCAAGTTGGGGCTAAGAAGGCTGGGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: TIERAHLSTPTHDPM*HFVPKLGLRRLGLA
Trigger: TGCCAGGCCCAGCCTTCTTAGCCCCAACTTGGGAACAAAGTGCAACATGGGATCATGGGTTGGGGTGCTCAGGTGAGCCCTCTCTATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACCGCCTCACAAAGGGCTaGTGCCTTGAACTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHRLTKG*CLELGL
Trigger: CAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCG...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTCAGAATGTGGGCACCTaGACCCAGGGCCCATACCAC +
Preference number: 2 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPQNVGT*TQGPYH
Trigger: GTGGTATGGGCCCTGGGTGCAGGTGCCCACATTCTG...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCATCCTCAAGCCCTCACTaGCCCACTCTAAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPSSSPH*PTLRVE
Trigger: CTCAACCCTTAGAGTGGGGCAGTGAGGGCTTGAGGA...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCCTGAATGTAAGTGGGTaGAGCTTTGCTCGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: SGGGDRLSFQERAAESDSLNVSG*SFARCE
Trigger: CTCACAGCGAGCAAAGCTGCACCCACTTACATTCAG...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCCTTCCTAAGGCAGCCTaGACACACCAGTCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSLPKAA*THQSEP
Trigger: TGGCTCTGACTGGTGTGTCCAGGCTGCCTTAGGAAG...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAAAAGCCCCCAAGAAATaGGCACCCAGAGCCCTCTAC +
Preference number: 2 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPKAPKK*APRALY
Trigger: GTAGAGGGCTCTGGGTGCCCATTTCTTGGGGGCTTT...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGACTGCAAATACTGTCTaGGCCAGAGCCACCAGAGGC +
Preference number: 2 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQTANTV*ARATRG
Trigger: GCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGT...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGCTAGGCCCACAGAAATaGTGCTGGGTCAACAGGGAA +
Preference number: 2 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRLGPQK*CWVNRE
Trigger: TTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAG...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGGGCAAGGGAACTTGGTaGGAGAGGCTGTTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLGKGTW*ERLFQE
Trigger: TTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGCC...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAACAGCTGCCGAAACTTaGGGAAGAAGACTCCCACCC +
Preference number: 2 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQTAAET*GRRLPP
Trigger: GGGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGT...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTTGCCAACCTGTCACGTaGCAACAGGTGCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPCQPVT*QQVPGE
Trigger: TTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCA...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCACAGCAGCAGCACAGCTaGCGAAACTTGAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPQQQHS*RNLRKK
Trigger: CTTCTTCCTCAAGTTTCGGCAGCTGTGCTGCTGCTG...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQASSEQ*SLPAVE
Trigger: CTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGC...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACCTTCCTAAGGCAGCCTaGACACACCAGTCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHLPKAA*THQSEP
Trigger: TGGCTCTGACTGGTGTGTCCAGGCTGCCTTAGGAAG...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAAAAGCCCCCAAGAAATaGGCACCCAGAGCCCTCTAC +
Preference number: 2 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQKAPKK*APRALY
Trigger: GTAGAGGGCTCTGGGTGCCCATTTCTTGGGGGCTTT...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCAATACTGAATGTAAGTaGGTGCAGCTTTGCTCGCTG +
Preference number: 2 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPNTECK*VQLCSL
Trigger: CAGCGAGCAAAGCTGCACCCACTTACATTCAGTATT...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR TCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACAGCCCTGTGGTGCCCTaGGGGCACCTATTAAAGAGC +
Preference number: 2 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHSPVVP*GHLLKS
Trigger: GCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCT...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCAGAACAATGGTCCCTaGCTGCAGTGGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACQNNGP*LQWRGR
Trigger: CCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCAGAACAATGGTCCCTaGCTGCAGTGGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: KKTPTHSTRTANTVWARAQNNGP*LQWRGR
Trigger: CCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTCAATCAGCAGGGCCCTaGAGCCACAGATCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCQSAGP*SHRSQR
Trigger: TCTTTGAGATCTGTGGCTGCAGGGCCCTGCTGATTG...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTTCCTCAAGCCCTCACTaGCCCACTCTAAGGGTTGAG +
Preference number: 2 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPSSSPH*PTLRVE
Trigger: CTCAACCCTTAGAGTGGGGCAGTGAGGGCTTGAGGA...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGCCCATGATCCCATGTTaGACTTTGTTCCCAAGTTGG +
Preference number: 2 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRPMIPC*TLFPSW
Trigger: CCAACTTGGGAACAAAGTGCAACATGGGATCATGGG...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTGCCTTGAACTTGGCCTaGGGAAATGAGACCCTGAGC +
Preference number: 2 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPALNLA*GNETLS
Trigger: GCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGC...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp ACAATGAACAGTGTGGCCCTAGGCTCAAAGGAGAGGGTGCTAACCTaGGCAATGGCTGAAATCGGTGTCACCTCCTGGCCATCTGTTAGA +
Preference number: 2 (lower is better)
Translates to: TMNSVALGSKERVLT*AMAEIGVTSWPSVR
Trigger: TCTAACAGATGGCCAGGAGGTGACACCGATTTCAGCCATTGCCAAGGTTAGCACCCTCTCCTTTGAGCCTAGGGCCACACTGTTCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTGGCCCACAGAAATGGTaGTGGGTCAACAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPGPQKW*WVNRET
Trigger: TGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCC...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCGCTGAAGCCACAGAATaGTACAGGAGAGAAGACTGT +
Preference number: 2 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSAEATE*YRREDC
Trigger: ACAGTCTTCTCTCCTGTACCATTCTGTGGCTTCAGC...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 90 bp GGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTaGCCTAAAGTGACAATGAACAGTGTGGCCCTAGGCTCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: GFSQLAGLPLKPNRH*PKVTMNSVALGSKE
Trigger: CTCCTTTGAGCCTAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACCCCTCTGCCATAAGTTaGCCTCAGCCCAGCTTCATT +
Preference number: 2 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHPSAIS*PQPSFI
Trigger: AATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGG...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGCTCATTAGCAGAATGTaGGCACCTGCACCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMLISRM*APAPRA
Trigger: GGCCCTGGGTGCAGGTGCCCACATTCTGCTAATGAG...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR GCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAGAGGGCGTGTGGTCTaGCCTCCTTCACTTTATATA +
Preference number: 2 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKRGRVV*PPSLYI
Trigger: TATATAAAGTGAAGGAGGGCAGACCACACGCCCTCT...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
3UTR GCA 72 bp CCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCAACTaGGGCGGGAGCCACCGGCGCAGGCCTCGGGCGGTG +
Preference number: 3 (lower is better)
Translates to: PSPARKVQSKRN*GGSHRRRPRAV
Trigger: CACCGCCCGAGGCCTGCGCCGGTGGCTCCCGCCGCAGTTGCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCAGGATGGGTCCAGCTTaGTGCAGTCAGCCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSARMGPA*CSQPCG
Trigger: ACCACAGGGCTGACTGCACAAAGCTGGACCCATCCT...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCGCTGCTGCCTTGAACTaGGCCTGGGGAAATGAGACC +
Preference number: 3 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRAAALN*AWGNET
Trigger: GGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGC...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 72 bp GGACAGGTGCCAACCTGTCACGTGCCAACAGGTGCCTaGGGAACCCAGGCGCCGCCCTCTGCCATAAGTTGG +
Preference number: 3 (lower is better)
Translates to: GQVPTCHVPTGA*GTQAPPSAISW
Trigger: CCAACTTATGGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCACCTGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCCACAGCTGCCGAAACTaGAGGAAGAAGACTCCCACC +
Preference number: 3 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRHSCRN*RKKTPT
Trigger: GGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGTG...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGCACTTTGTTCCCAAGTaGGGGCTAAGAAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: DTSGAGSARCTERSGLGPHFVPK*GLRRLG
Trigger: GCCCAGCCTTCTTAGCCCCAACTTGGGAACAAAGTG...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCAGGATGGGTCCAGCTTaGTGCAGTCAGCCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: GCSFARCEEQQNAAASPPRMGPA*CSQPCG
Trigger: ACCACAGGGCTGACTGCACAAAGCTGGACCCATCCT...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAGCCCTCTGCCATAAGTaGGCCTCAGCCCAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTALCHK*ASAQLH
Trigger: ATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGGC...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGGAGAGGGTGCTAACCTaGGCAATGGCTGAAATCGGT +
Preference number: 3 (lower is better)
Translates to: DTSGAGSARCTERSGLGPERVLT*AMAEIG
Trigger: ACCGATTTCAGCCATTGCCAAGGTTAGCACCCTCTC...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp GTGCTTGAGACGCATCTCAGACCGGCGGTCCAGGCAGGACTCAGCCCGGCACTCTTCAGGCCCCGCAGTTaGCTCAGGATAGGCTCAAAC +
Preference number: 3 (lower is better)
Translates to: VLETHLRPAVQAGLSPALFRPRS*LRIGSN
Trigger: GTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAA...GAGTGCCGGGCTGAGTCCTGCCTGGACCGCCGGTCTGAGATGCGTCTCAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR TCA 72 bp AAGGCAGCCTGGACACACCAGTCAGAGCCACAAAGCTaGGGAGCCTGGCTGAGAGGGCGTGTGGTCTGCCCT +
Preference number: 3 (lower is better)
Translates to: KAAWTHQSEPQS*GAWLRGRVVCP
Trigger: AGGGCAGACCACACGCCCTCTCAGCCAGGCTCCTCAGCTTTGTGGCTCTGACTGGTGTGTCCAGGCTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 72 bp AATAGGACAGGTGCCAACCTGTCACGTGCCAACAGGTaGCTGGGGAACCCAGGCGCCGCCCTCTGCCATAAG +
Preference number: 3 (lower is better)
Translates to: NRTGANLSRANR*LGNPGAALCHK
Trigger: CTTATGGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCACCTGTCCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCACCCATGATCCCATGTaGCACTTTGTTCCCAAGTTG +
Preference number: 3 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRTHDPM*HFVPKL
Trigger: CAACTTGGGAACAAAGTGCAACATGGGATCATGGGT...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 72 bp AAAGAATGGGAACCTGCCCACCAGTGGCACCAGGGCTaGGGGCTAGGAGAGATGGCATCCATCAAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: KEWEPAHQWHQG*GLGEMASIKEP
Trigger: GGGCTCCTTGATGGATGCCATCTCTCCTAGCCCCCAGCCCTGGTGCCACTGGTGGGCAGGTTCCCATTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 72 bp CTGCTAGGACACCGACTATCCCCCACTTCAGTGGGGTaGGAGGGAGTGGCCTTCTTAGGCAAGGGAACTTGG +
Preference number: 3 (lower is better)
Translates to: LLGHRLSPTSVG*EGVAFLGKGTW
Trigger: CCAAGTTCCCTTGCCTAAGAAGGCCACTCCCTCCCACCCCACTGAAGTGGGGGATAGTCGGTGTCCTAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 72 bp AAGAGAAACCAATGTCCAAGGGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCACCTCTTCCTTCCTAAG +
Preference number: 3 (lower is better)
Translates to: KRNQCPRAPCPC*QAHQGHLFLPK
Trigger: CTTAGGAAGGAAGAGGTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGCCCTTGGACATTGGTTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGAGCCATTGTGCAGATATaGATAGAGGGCATTGCGGAA +
Preference number: 3 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGAIVQI*IEGIAE
Trigger: TTCCGCAATGCCCTCTATCAATATCTGCACAATGGC...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
3UTR GCA 72 bp ATGCTAAGGTCAGACCGAAGGATGGGTCCAGCTTTGTaGAGTCAGCCCTGTGGTGCCCTGAGGGCACCTATT +
Preference number: 3 (lower is better)
Translates to: MLRSDRRMGPAL*SQPCGALRAPI
Trigger: AATAGGTGCCCTCAGGGCACCACAGGGCTGACTGCACAAAGCTGGACCCATCCTTCGGTCTGACCTTAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 72 bp GCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAGAGGAAGGGGTTCTGG +
Preference number: 3 (lower is better)
Translates to: ASLCVLTASSEQ*SLPAVERKGFW
Trigger: CCAGAACCCCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAAGGATGGGTCCAGCTTaGTGCAGTCAGCCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQRMGPA*CSQPCG
Trigger: ACCACAGGGCTGACTGCACAAAGCTGGACCCATCCT...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGCACAGCTGCCGAAACTaGAGGAAGAAGACTCCCACC +
Preference number: 3 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLHSCRN*RKKTPT
Trigger: GGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGTG...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR TCA 72 bp TCACTCCTCAAGCCCTCACTGCCCCACTCTAAGGGTTaGGGGCCATATTCTAGGCCCACAGAAATGGTGCTG +
Preference number: 3 (lower is better)
Translates to: SLLKPSLPHSKG*GPYSRPTEMVL
Trigger: CAGCACCATTTCTGTGGGCCTAGAATATGGCCCTCAACCCTTAGAGTGGGGCAGTGAGGGCTTGAGGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR TCA 72 bp AATACTGAATGTAAGTGGGTGCAGCTTTGCTCGCTGTaGGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: NTECKWVQLCSL*GAAECGSLSSQ
Trigger: CTGGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCCACTTACATTCAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCACCCATGATCCCATGTaGCACTTTGTTCCCAAGTTG +
Preference number: 3 (lower is better)
Translates to: SGGGDRLSFQERAAESDSTHDPM*HFVPKL
Trigger: CAACTTGGGAACAAAGTGCAACATGGGATCATGGGT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR TCA 72 bp CACTATAGAGAGGGCTCACCTGAGCACCCCAACCCATaGTCCCATGTTGCACTTTGTTCCCAAGTTGGGGCT +
Preference number: 3 (lower is better)
Translates to: HYREGSPEHPNP*SHVALCSQVGA
Trigger: AGCCCCAACTTGGGAACAAAGTGCAACATGGGATCATGGGTTGGGGTGCTCAGGTGAGCCCTCTCTATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCCTTAGGCAAGGGAACTaGGTGAGAGAGGCTGTTTCA +
Preference number: 3 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSLRQGN*VREAVS
Trigger: TGAAACAGCCTCTCTCACCAAGTTCCCTTGCCTAAG...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 72 bp CCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTaGAGCCACAGATCTCAAAGATCTAGACAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: PAQGFTLQSAGP*SHRSQRSRQEK
Trigger: TTTCTCTTGTCTAGATCTTTGAGATCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 72 bp TGGCATGGGGCAGGGAGAAAGCAGTGGCAGACAGTATaGACACACACTTGCCCACTACCATTAAATAACAGG +
Preference number: 3 (lower is better)
Translates to: WHGAGRKQWQTV*THTCPLPLNNR
Trigger: CCTGTTATTTAATGGTAGTGGGCAAGTGTGTGTGCATACTGTCTGCCACTGCTTTCTCCCTGCCCCATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR-3UTR CAA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTACAAAGGGCTGCTGCCTaGAACTTGGCCTGGGGAAAT +
Preference number: 3 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALQRAAA*NLAWGN
Trigger: ATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTG...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 72 bp CTAACCTTGGCAATGGCTGAAATCGGTGTCACCTCCTaGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTA +
Preference number: 3 (lower is better)
Translates to: LTLAMAEIGVTS*PSVRSSRSVPL
Trigger: TAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGAGGTGACACCGATTTCAGCCATTGCCAAGGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 72 bp AGGGTTGAGGGCCATATTCTAGGCCCACAGAAATGGTaGTGGGTCAACAGGGAAACACCAATTTATTCTGCT +
Preference number: 3 (lower is better)
Translates to: RVEGHILGPQKW*WVNRETPIYSA
Trigger: AGCAGAATAAATTGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAGAATATGGCCCTCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR GCA 72 bp GGAGAGATGGCATCCATCAAGGAGCCCTTAAGAGGCTaGATCTTTAAGGACCAGGAAATGAGTCCATCAGTT +
Preference number: 3 (lower is better)
Translates to: GEMASIKEPLRG*IFKDQEMSPSV
Trigger: AACTGATGGACTCATTTCCTGGTCCTTAAAGATGCAGCCTCTTAAGGGCTCCTTGATGGATGCCATCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CCA 72 bp ATGACTATCTACACTAATGAAGGGCTACTGCCCCCATaGCTGAAGCCACAGAATGGTACAGGAGAGAAGACT +
Preference number: 3 (lower is better)
Translates to: MTIYTNEGLLPP*LKPQNGTGEKT
Trigger: AGTCTTCTCTCCTGTACCATTCTGTGGCTTCAGCCATGGGGGCAGTAGCCCTTCATTAGTGTAGATAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCGCTGGGGCCACAGGATaGCGCCACCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSAAGATG*RHLREH
Trigger: GTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAGC...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCACATCCACCTTGGGCTaGGAGGAGGGACCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRTSTLG*EEGPAS
Trigger: CGAGGCGGGTCCCTCCTCTCAGCCCAAGGTGGATGT...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGTTTCGGCCCGCCCCCTaGCAGGCAGCACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPFRPAP*QAAQVA
Trigger: AGCCACCTGTGCTGCCTGCCAGGGGGCGGGCCGAAA...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR TCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAGTCACTGCCACTGCCTaGCCGGTGCAGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTVTATA*PVQAPA
Trigger: CGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGAC...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGACATCCACCTTGGGCTaGGAGGAGGGACCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPTSTLG*EEGPAS
Trigger: CGAGGCGGGTCCCTCCTCTCAGCCCAAGGTGGATGT...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCGACCCGCCTCGGGGCTaGTGTTGCTGGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLPLQHSFQAPQFAQDRLDPPRG*CCWGWC
Trigger: GCACCAGCCCCAGCAACACCAGCCCCGAGGCGGGTC...GAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCGACCCGCCTCGGGGCTaGTGTTGCTGGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPDPPRG*CCWGWC
Trigger: GCACCAGCCCCAGCAACACCAGCCCCGAGGCGGGTC...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCGAGAGGAAGGGGTTCTaGGGGCCCAGAACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSAERKGF*GPRTGP
Trigger: AGGCCCTGTTCTGGGCCCCCAGAACCCCTTCCTCTC...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGGCATGCCGCAGACCCTaGCGCCCAGCGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: EGPCTSPGLYLTISRALQACRRP*RPAWLM
Trigger: CATCAGCCACGCTGGGCGTCAGGGTCTGCGGCATGC...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCGCTGGGGCCACAGGATaGCGCCACCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPAGATG*RHLREH
Trigger: GTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAGC...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCTGGACTCGGAGCGCATaGGGCTCAGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSAWTRSA*GSAAAC
Trigger: ACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCA...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCAGAGCTTTCGGTCCTTaGACTCGGAGCGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRRAFGP*TRSACG
Trigger: GCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCT...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGTCCCAAGGGACGGGCTaGCAGCCGGACACATGGACA +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPSQGTG*QPDTWT
Trigger: TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGA...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CAGGCCCCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGGTCCAGGTCACTGCCACTGCCTaGCCGGTGCAGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: QAPQFAQDRLKQVTSQVQVTATA*PVQAPA
Trigger: CGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGAC...CTGGACCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGACCACTGCCTGACCGGTaGAGGCTCCGGCGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGPLPDR*RLRREC
Trigger: ACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGG...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCACCTCTGAGTGGCTGTaGAGCTCCACCTTCGGACTC +
Preference number: 4 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSATSEWL*SSTFGL
Trigger: GAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGT...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCTCGCATTTCCGCATCTaGCGGGCTGCCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRSHFRI*RAAFSA
Trigger: AGCTGAGAAGGCAGCCCGGCAGATGCGGAAATGCGA...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCATGGGTCCAGCTTTGTaGAGTCAGCCCTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSAMGPAL*SQPCGA
Trigger: GGCACCACAGGGCTGACTGCACAAAGCTGGACCCAT...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGCAGAATGTGGGCACCTaGACCCAGGGCCCATACCAC +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPQNVGT*TQGPYH
Trigger: GTGGTATGGGCCCTGGGTGCAGGTGCCCACATTCTG...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCAATCCCCATGCTCACTaGACAGGCCCAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRNPHAH*TGPERE
Trigger: CTCCCTCTCTGGGCCTGTGCAGTGAGCATGGGGATT...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGAGAGCTTTCGGTCCTTaGACTCGGAGCGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPRAFGP*TRSACG
Trigger: GCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCT...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGTGCCCTGTGTCCAGCTaGTACACCTGCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPCPVSS*YTCMPQ
Trigger: CTGCGGCATGCAGGTGTACCAGCTGGACACAGGGCA...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGTGCTGGGGCTGGTGCTaGGGCCACAGGATGACGCCA +
Preference number: 4 (lower is better)
Translates to: EGPCTSPGLYLTISRALQCWGWC*GHRMTP
Trigger: TGGCGTCATCCTGTGGCCCCAGCACCAGCCCCAGCA...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCGTGCCAACAGGTGCCTaGGGAACCCAGGCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPVPTGA*GTQAPP
Trigger: GGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCAC...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGGCTTCGAGGTACACGTaGGGTTCCGAACGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPASRYT*GSERVS
Trigger: TGAGACCCGTTCGGAACCTCACGTGTACCTCGAAGC...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGACCACTGCCTGACCGGTaGAGGCTCCGGCGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRPLPDR*RLRREC
Trigger: ACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGG...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGCCAGCGTGGCTGATGTaGTCTGCTCGCATTTCCGCA +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPPAWLM*SARISA
Trigger: TGCGGAAATGCGAGCAGAGCACATCAGCCACGCTGG...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACTGTCTGGCCCATCATaGACGGTGGGGTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTLSGPS*TVGSSR
Trigger: CCGGGATGACCCCACCGTGCATGATGGGCCAGACAG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGCTCACAAAGGGCTGCTaGCTTGAACTTGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPLTKGC*LELGLG
Trigger: CCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAG...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCTGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRCGSLQ*RAHGHS
Trigger: ACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCA...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGGAGAGGAAGGGGTTCTaGGGGCCCAGAACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EGPCTSPGLYLTISRALQERKGF*GPRTGP
Trigger: AGGCCCTGTTCTGGGCCCCCAGAACCCCTTCCTCTC...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAAGGGAAGAGTGGGCGTaGAGGGGCCCTGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LQILSGPEPPEALRPARTREEWA*RGPAPA
Trigger: GGCTGGTGCAGGGCCCCTCCACGCCCACTCTTCCCT...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCACTGCAAATACTGTCTaGGCCAGAGCCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRTANTV*ARATRG
Trigger: GCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGT...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCTCCCAAGGGACGGGCTaGCAGCCGGACACATGGACA +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPSQGTG*QPDTWT
Trigger: TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGA...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACAGTGGCACCAGGGCTaGGGGCTAGGAGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTQWHQG*GLGEMA
Trigger: TGCCATCTCTCCTAGCCCCCAGCCCTGGTGCCACTG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACCAACCCTCAGGCACTaGCGCTCTCCGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTPTLRH*RSPSST
Trigger: TGTGGAGGACGGAGAGCGCCAGTGCCTGAGGGTTGG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR TCA 90 bp CCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCAAACAGGGCAGCACAGGTGGCTaGGCACCGCTACAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PLQHSFQAPQFAQDRLKQGSTGG*APLQRP
Trigger: AGGCCGCTGTAGCGGTGCTCAGCCACCTGTGCTGCC...CTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCGCATGCCGCAGACCCTaGCGCCCAGCGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: QPCGALRAPIKELADTHSACRRP*RPAWLM
Trigger: CATCAGCCACGCTGGGCGTCAGGGTCTGCGGCATGC...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCCCACTGCCTGACCGGTaGAGGCTCCGGCGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSPLPDR*RLRREC
Trigger: ACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGG...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCGGGTACTTGAAGTGGTaGACCACGTTCTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSAGYLKW*TTFSSR
Trigger: CCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCC...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGAGACGCGTCATCGCCATaGTGCCGCGTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGDASSP*CRVPIF
Trigger: GAAGATGGGCACGCGGCAGCATGGCGATGACGCGTC...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCAGCACCATGTCCAGGTaGTTGAGACGCATCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRSTMSR*LRRISD
Trigger: GTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCT...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATGTTGCTGGGGCTGGTaGTGGGGCCACAGGATGACG +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGCCWGW*WGHRMT
Trigger: CGTCATCCTGTGGCCCCAGCACCAGCCCCAGCAACA...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGATCACGTGCCAACAGGTaGCTGGGGAACCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRSRANR*LGNPGA
Trigger: GGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGA...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCGGCCCACAGAAATGGTaGTGGGTCAACAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSAGPQKW*WVNRET
Trigger: TGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCC...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCCAAAGCAAACGCAACTaGGGCGGGAGCCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPQSKRN*GGSHRR
Trigger: GCGCCGGTGGCTCCCGCCGCAGTTGCGTTTGCTTTG...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGACAAAGCAAACGCAACTaGGGCGGGAGCCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRQSKRN*GGSHRR
Trigger: GCGCCGGTGGCTCCCGCCGCAGTTGCGTTTGCTTTG...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCTTTCGGCCCGCCCCCTaGCAGGCAGCACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSFRPAP*QAAQVA
Trigger: AGCCACCTGTGCTGCCTGCCAGGGGGCGGGCCGAAA...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR CCA 90 bp GTTCTGGGGGCCCAGAACAGGGCCTACTGGTTCTCGTCCCGCATCTGTTCCATGTGCTGGGGCTGGTGCTaGGGCCACAGGATGACGCCA +
Preference number: 4 (lower is better)
Translates to: VLGAQNRAYWFSSRICSMCWGWC*GHRMTP
Trigger: TGGCGTCATCCTGTGGCCCCAGCACCAGCCCCAGCA...CATGGAACAGATGCGGGACGAGAACCAGTAGGCCCTGTTCTGGGCCCCCAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp ACCTCAGGGAGCACCATGTCCAGGTGCTTGAGACGCATCTCAGACCGGCGGTCCTGGTGTTGCTGGGGCTaGTGCTGGGGCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: TSGSTMSRCLRRISDRRSWCCWG*CWGHRM
Trigger: CATCCTGTGGCCCCAGCACCAGCCCCAGCAACACCA...GGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGAAAGCCCCCAAGAAATaGGCACCCAGAGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPKAPKK*APRALY
Trigger: GTAGAGGGCTCTGGGTGCCCATTTCTTGGGGGCTTT...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCACTGCCACTGCCTaGCCGGTGCAGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQVTATA*PVQAPA
Trigger: CGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGAC...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CTCAGGGAGCACCATGTCCAGGTGCTTGAGACGCATCTCAGACCGGCGGTCCAGCTGGAAAGGGACCTCTaGGTGGCTGTGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LREHHVQVLETHLRPAVQLERDL*VAVQLH
Trigger: GTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAG...CTGGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp ACCTCAGGGAGCACCATGTCCAGGTGCTTGAGACGCATCTCAGACCGGCGGTCCGACGCCCAGCGTGGCTaGTGTGCTCTGCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: TSGSTMSRCLRRISDRRSDAQRG*CALLAF
Trigger: AAATGCGAGCAGAGCACATCAGCCACGCTGGGCGTC...GGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGGCATGCCGCAGACCCTaGCGCCCAGCGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRACRRP*RPAWLM
Trigger: CATCAGCCACGCTGGGCGTCAGGGTCTGCGGCATGC...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGCTGGGGCCACAGGATaGCGCCACCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PQFAQDRLKQVTSQVQAIAGATG*RHLREH
Trigger: GTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAGC...AATGGCCTGGACCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAAGCCCTGTGGTGCCCTaGGGGCACCTATTAAAGAGC +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTSPVVP*GHLLKS
Trigger: GCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCT...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCCCCACTCTAAGGGTTaGGGGCCATATTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPPHSKG*GPYSRP
Trigger: GGGCCTAGAATATGGCCCTCAACCCTTAGAGTGGGG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGAGACGCGTCATCGCCATaGTGCCGCGTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRDASSP*CRVPIF
Trigger: GAAGATGGGCACGCGGCAGCATGGCGATGACGCGTC...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCTCGCATTTCCGCATCTaGCGGGCTGCCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLPLQHSFQAPQFAQDRLSHFRI*RAAFSA
Trigger: AGCTGAGAAGGCAGCCCGGCAGATGCGGAAATGCGA...GAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGATGTTGCTGGGGCTGGTaGTGGGGCCACAGGATGACG +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRCCWGW*WGHRMT
Trigger: CGTCATCCTGTGGCCCCAGCACCAGCCCCAGCAACA...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRAPCPC*QAHQGH
Trigger: GTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGC...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCTCACAAAGGGCTGCTaGCTTGAACTTGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGPCTSPGLYLTISRALQLTKGC*LELGLG
Trigger: CCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAG...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTTTCGGCCCGCCCCCTaGCAGGCAGCACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QHSFQAPQFAQDRLKQVTFRPAP*QAAQVA
Trigger: AGCCACCTGTGCTGCCTGCCAGGGGGCGGGCCGAAA...CGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCTTGCCATCTAGCATCTaGAAAGGGACCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRLPSSI*KGTSEW
Trigger: CCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAA...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGATGCGGACATCCACCTTaGGCTGAGAGGAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRCGHPP*AERRDP
Trigger: CGGGTCCCTCCTCTCAGCCCAAGGTGGATGTCCGCA...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 72 bp CCCAGGGCCAAGAGCGCCTCACAAAGGGCTGCTGCCTaGAACTTGGCCTGGGGAAATGAGACCCTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PRAKSASQRAAA*NLAWGNETLSG
Trigger: TCCGCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCGCTCTTGGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 72 bp GCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTaGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ACRSSTAFRPRS*LRIGSNRSRRR
Trigger: CCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCACACGCAGGGGTACTTaGAGTGGTGCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPTRRGT*SGAPRS
Trigger: AGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGT...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGACAGCTGCCGAAACTTaGGGAAGAAGACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: EGPCTSPGLYLTISRALQTAAET*GRRLPP
Trigger: GGGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGT...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GTTCTGGGGGCCCAGAACAGGGCCTACTGGTTCTCGTCCCGCATCTGTTCCATGGCGTTGGGGGCCAGTTaGACACTGAGGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VLGAQNRAYWFSSRICSMALGAS*TLRAED
Trigger: ATCCTCTGCCCTCAGTGTGCAACTGGCCCCCAACGC...CATGGAACAGATGCGGGACGAGAACCAGTAGGCCCTGTTCTGGGCCCCCAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp GTCTGGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGCCTCCTTGTGGTCACTaGCACTGCCTGACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: VWPIMHGGVIPEALECAVPPCGH*HCLTGA
Trigger: TGCACCGGTCAGGCAGTGGCAGTGACCACAAGGAGG...CACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGACCAGCGTGGCTGATGTaGTCTGCTCGCATTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGPAWLM*SARISA
Trigger: TGCGGAAATGCGAGCAGAGCACATCAGCCACGCTGG...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAGCCGTGACACCGGCCTaGCTGGCTCGCGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQAVTPA*LARGGF
Trigger: AAAGCCCCCGCGAGCCAGGCAGGCCGGTGTCACGGC...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR CCA 90 bp GGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCTGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: GLPLQHSFQAPQFAQDRLCGSLQ*RAHGHS
Trigger: ACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCA...GAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGACCCGCCTCGGGGCTaGTGTTGCTGGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHDPPRG*CCWGWC
Trigger: GCACCAGCCCCAGCAACACCAGCCCCGAGGCGGGTC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GTCTGGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGCACGTAGCCTCTGTCTaGCCCATCATGCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: VWPIMHGGVIPEALECAVHVASV*PIMHGG
Trigger: CCCACCGTGCATGATGGGCCAGACAGAGGCTACGTG...CACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACAGAACAGGGCCTACTaGTTCTCGTCCCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTQNRAY*FSSRIC
Trigger: ACAGATGCGGGACGAGAACCAGTAGGCCCTGTTCTG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCAGGGAAGAGTGGGCGTaGAGGGGCCCTGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSREEWA*RGPAPA
Trigger: GGCTGGTGCAGGGCCCCTCCACGCCCACTCTTCCCT...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCGAGGGGTGGGGTCCCTaGCAAGTTGCTACACTGGTC +
Preference number: 4 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPEGWGP*QVATLV
Trigger: GACCAGTGTAGCAACTTGCCAGGGACCCCACCCCTC...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACCACGCCGGCCGCTTaGTCCAGCTCCCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACTTPAA*SSSRRC
Trigger: GCAGCGCCGGGAGCTGGACCAAGCGGCCGGCGTGGT...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460540.1
3UTR CAA 72 bp GCCAAGAGCGCCTCACAAAGGGCTGCTGCCTTGAACTaGGCCTGGGGAAATGAGACCCTGAGCGGACCACAG +
Preference number: 4 (lower is better)
Translates to: AKSASQRAAALN*AWGNETLSGPQ
Trigger: CTGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCGCTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAAAGGTCCTGGCCAGGTaGAAGCCAATGGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTKVLAR*KPMVRF
Trigger: GAATCTGACCATTGGCTTTCACCTGGCCAGGACCTT...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR TCA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGACTCTTTGCCTCCTGTaGGCTCTCAGAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: EGPCTSPGLYLTISRALQTLCLL*ALRGLK
Trigger: CTTGAGACCTCTGAGAGCTCACAGGAGGCAAAGAGT...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCACTCTTTGCCTCCTGTaGGCTCTCAGAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: GLPLQHSFQAPQFAQDRLTLCLL*ALRGLK
Trigger: CTTGAGACCTCTGAGAGCTCACAGGAGGCAAAGAGT...GAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCCTGGAAAGGGACCTCTaGGTGGCTGTGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSLERDL*VAVQLH
Trigger: GTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAG...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp ACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCATTGCGGAAGCCACATCCACCTTGGGCTaGGAGGAGGGACCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: TSQVQAIVQILIEGIAEATSTLG*EEGPAS
Trigger: CGAGGCGGGTCCCTCCTCTCAGCCCAAGGTGGATGT...GGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACCCGACTTGCATTCTTaGCATACTGCCCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTPDLHS*HTAPLP
Trigger: TGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGTCCGGCGGGAGTGTTTaGGCCGAGGTTGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRSGGSV*AEVAPV
Trigger: AACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGA...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCCACTGCCTGACCGGTaGAGGCTCCGGCGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQPLPDR*RLRREC
Trigger: ACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGG...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGTGTGGTCACTGCCACTaGCTGACCGGTGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRCGHCH*LTGAGS
Trigger: GGAGCCTGCACCGGTCAGGCAGTGGCAGTGACCACA...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCCCTCCTTGTGGTCACTaGCACTGCCTGACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSPPCGH*HCLTGA
Trigger: TGCACCGGTCAGGCAGTGGCAGTGACCACAAGGAGG...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCGGGTACTTGAAGTGGTaGACCACGTTCTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLPLQHSFQAPQFAQDRLGYLKW*TTFSSR
Trigger: CCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCC...GAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGGACGCGTCATCGCCATaGTGCCGCGTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRDASSP*CRVPIF
Trigger: GAAGATGGGCACGCGGCAGCATGGCGATGACGCGTC...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGACCAGCGTGGCTGATGTaGTCTGCTCGCATTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRPAWLM*SARISA
Trigger: TGCGGAAATGCGAGCAGAGCACATCAGCCACGCTGG...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCAATCAGCAGGGCCCTaGAGCCACAGATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: EGPCTSPGLYLTISRALQQSAGP*SHRSQR
Trigger: TCTTTGAGATCTGTGGCTGCAGGGCCCTGCTGATTG...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCAGCAGCAGCACAGCTaGCGAAACTTGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPQQQHS*RNLRKK
Trigger: CTTCTTCCTCAAGTTTCGGCAGCTGTGCTGCTGCTG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCCAGAATGTGGGCACCTaGACCCAGGGCCCATACCAC +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSQNVGT*TQGPYH
Trigger: GTGGTATGGGCCCTGGGTGCAGGTGCCCACATTCTG...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGCCCATGATCCCATGTTaGACTTTGTTCCCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPPMIPC*TLFPSW
Trigger: CCAACTTGGGAACAAAGTGCAACATGGGATCATGGG...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAAATCCCCATGCTCACTaGACAGGCCCAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LQILSGPEPPEALRPARTNPHAH*TGPERE
Trigger: CTCCCTCTCTGGGCCTGTGCAGTGAGCATGGGGATT...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTCAAAGCAAACGCAACTaGGGCGGGAGCCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPQSKRN*GGSHRR
Trigger: GCGCCGGTGGCTCCCGCCGCAGTTGCGTTTGCTTTG...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGAGCAGAGGGTCCCCCTTaGCATAATCATAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRAEGPP*HNHRAV
Trigger: CACGGCCCTATGATTATGGCAAGGGGGACCCTCTGC...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGGGCAGGCAGCACAGGTaGCTGAGCACCGCTACAGCG +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLGRQHR*LSTATA
Trigger: CGCTGTAGCGGTGCTCAGCCACCTGTGCTGCCTGCC...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR CCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCAGGCTCCAGGGGTTGTaGCTGATCTTCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPRLQGL*LIFSEL
Trigger: GAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCT...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGACCCGCCTCGGGGCTaGTGTTGCTGGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPADPPRG*CCWGWC
Trigger: GCACCAGCCCCAGCAACACCAGCCCCGAGGCGGGTC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCTAGGCCCACAGAAATaGTGCTGGGTCAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPLGPQK*CWVNRE
Trigger: TTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAATCGGTGTCACCTCCTaGCCATCTGTTAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTIGVTS*PSVRSS
Trigger: GCTGCTTCTAACAGATGGCCAGGAGGTGACACCGAT...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGGCTGAAGCCACAGAATaGTACAGGAGAGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPAEATE*YRREDC
Trigger: ACAGTCTTCTCTCCTGTACCATTCTGTGGCTTCAGC...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGTGCAACACGCAGGGGTACTTaGAGTGGTGCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: GPSCTVGSSRKPLNVLCATRRGT*SGAPRS
Trigger: AGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGT...TGCACACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCATGCCGCAGACCCTaGCGCCCAGCGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAACRRP*RPAWLM
Trigger: CATCAGCCACGCTGGGCGTCAGGGTCTGCGGCATGC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGCTGGGGCCACAGGATaGCGCCACCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACAGATG*RHLREH
Trigger: GTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAGC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGACATCCACCTTGGGCTaGGAGGAGGGACCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQTSTLG*EEGPAS
Trigger: CGAGGCGGGTCCCTCCTCTCAGCCCAAGGTGGATGT...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTAGCCACCAGAGGCCCTaGGGCCTGCTAGGACACCGA +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCSHQRP*GLLGHR
Trigger: TCGGTGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCT...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGCATGTGGTCAGGAGTaGGCGCGTGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPACGQE*AREQRL
Trigger: TAGCCGCTGCTCACGCGCTCACTCCTGACCACATGC...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTTCCAGCTCCCGGCGCTaGCCACTGGGTACGGATCAA +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPSSSRR*PLGTDQ
Trigger: TTGATCCGTACCCAGTGGGCAGCGCCGGGAGCTGGA...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR GCA 90 bp ACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCATTGCGGAAGCCTCCAGCTCCCGGCGCTaGCCACTGGGTACGGATCAA +
Preference number: 4 (lower is better)
Translates to: TSQVQAIVQILIEGIAEASSSRR*PLGTDQ
Trigger: TTGATCCGTACCCAGTGGGCAGCGCCGGGAGCTGGA...GGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGACCCGACTTGCATTCTTaGCATACTGCCCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGPDLHS*HTAPLP
Trigger: TGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGG...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGTGTGGTCACTGCCACTaGCTGACCGGTGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLCGHCH*LTGAGS
Trigger: GGAGCCTGCACCGGTCAGGCAGTGGCAGTGACCACA...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGCCTCCTTGTGGTCACTaGCACTGCCTGACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRPPCGH*HCLTGA
Trigger: TGCACCGGTCAGGCAGTGGCAGTGACCACAAGGAGG...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCGACGCGTCATCGCCATaGTGCCGCGTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSDASSP*CRVPIF
Trigger: GAAGATGGGCACGCGGCAGCATGGCGATGACGCGTC...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTCAGGGAGCACCATGTCCAGGTGCTTGAGACGCATCTCAGACCGGCGGTCCAGCATAGTACTTGTTCCTaGATGCCGCAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: LREHHVQVLETHLRPAVQHSTCS*MPQTLT
Trigger: CGTCAGGGTCTGCGGCATGCAGGAACAAGTACTATG...CTGGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGCCCGGCGCTGCCCACTaGGTACGGATCAACAACAAG +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRPGAAH*VRINNK
Trigger: CTTGTTGTTGATCCGTACCCAGTGGGCAGCGCCGGG...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR CCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGAAAAGGGACCTCTGAGTaGCTGTGCAGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRKGTSE*LCSSTF
Trigger: GAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTT...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTAGAGCTTTCGGTCCTTaGACTCGGAGCGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: PQFAQDRLKQVTSQVQAIRAFGP*TRSACG
Trigger: GCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCT...AATGGCCTGGACCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCTGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPCGSLQ*RAHGHS
Trigger: ACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCA...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGTGCTGGGGCTGGTGCTaGGGCCACAGGATGACGCCA +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLCWGWC*GHRMTP
Trigger: TGGCGTCATCCTGTGGCCCCAGCACCAGCCCCAGCA...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACTGCTGGGGCTGGTGCTaGGGCCACAGGATGACGCCA +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHCWGWC*GHRMTP
Trigger: TGGCGTCATCCTGTGGCCCCAGCACCAGCCCCAGCA...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGTGGTGTTGCTGGGGCTaGTGCTGGGGCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQWCCWG*CWGHRM
Trigger: CATCCTGTGGCCCCAGCACCAGCCCCAGCAACACCA...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCATGGTGTTGCTGGGGCTaGTGCTGGGGCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPWCCWG*CWGHRM
Trigger: CATCCTGTGGCCCCAGCACCAGCCCCAGCAACACCA...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGGCCCCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGGTCCAGCAGAACAGGGCCTACTaGTTCTCGTCCCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: QAPQFAQDRLKQVTSQVQQNRAY*FSSRIC
Trigger: ACAGATGCGGGACGAGAACCAGTAGGCCCTGTTCTG...CTGGACCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGGGAACAAGGGAAGAGTaGGCGTGGAGGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLGTREE*AWRGPA
Trigger: TGCAGGGCCCCTCCACGCCCACTCTTCCCTTGTTCC...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAAAAGCCCCCAAGAAATaGGCACCCAGAGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: LQILSGPEPPEALRPARTKAPKK*APRALY
Trigger: GTAGAGGGCTCTGGGTGCCCATTTCTTGGGGGCTTT...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACCACAGAAATGGTGCTaGGTCAACAGGGAAACACCA +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTPQKWC*VNRETP
Trigger: TGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGCAGTGGCACCAGGGCTaGGGGCTAGGAGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLQWHQG*GLGEMA
Trigger: TGCCATCTCTCCTAGCCCCCAGCCCTGGTGCCACTG...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGACAGAATCGAGGAATCTaGGAGGCACAGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRQNRGI*EAQDIP
Trigger: GGGGATGTCCTGTGCCTCCCAGATTCCTCGATTCTG...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGAATACTGAATGTAAGTaGGTGCAGCTTTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DTSGAGSARCTERSGLGPNTECK*VQLCSL
Trigger: CAGCGAGCAAAGCTGCACCCACTTACATTCAGTATT...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGTGCAAAGGTCCTGGCCAGGTaGAAGCCAATGGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: GPSCTVGSSRKPLNVLCAKVLAR*KPMVRF
Trigger: GAATCTGACCATTGGCTTTCACCTGGCCAGGACCTT...TGCACACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGGGCCAGTTGCACACTaGGGGCAGAGGATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHGPVAH*GQRMQH
Trigger: GTGCTGCATCCTCTGCCCTCAGTGTGCAACTGGCCC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR TCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCGATAGGCCACTAAGTTaGTGTAACCATCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPDRPLS*CNHHCP
Trigger: GGGACAGTGATGGTTACATCAACTTAGTGGCCTATC...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGTCACTGCCACTGCCTaGCCGGTGCAGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPVTATA*PVQAPA
Trigger: CGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGAC...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GTCTGGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGTCCAGGGGTTGTGGCTaGTCTTCTCAGAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: VWPIMHGGVIPEALECAVSRGCG*SSQNSS
Trigger: GCTTGAGTTCTGAGAAGATCAGCCACAACCCCTGGA...CACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCACACGCAGGGGTACTTaGAGTGGTGCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSTRRGT*SGAPRS
Trigger: AGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGGCTGCCTTCTCAGCTaGCGCGTCATCGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQGCLLS*RVIAML
Trigger: CAGCATGGCGATGACGCGTCAGCTGAGAAGGCAGCC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAACATCCACCTTGGGCTaGGAGGAGGGACCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPATSTLG*EEGPAS
Trigger: CGAGGCGGGTCCCTCCTCTCAGCCCAAGGTGGATGT...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCCACCAGAGGCCCTaGGGCCTGCTAGGACACCGA +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACSHQRP*GLLGHR
Trigger: TCGGTGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCT...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAAGCCACCAGAGGCCCTaGGGCCTGCTAGGACACCGA +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPASHQRP*GLLGHR
Trigger: TCGGTGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCT...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTCTTGGCCTGGGGAAATaGGACCCTGAGCGGACCACA +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPLGLGK*DPERTT
Trigger: TGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAG...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAGAGCACCCCAACCCATaGTCCCATGTTGCACTTTGT +
Preference number: 4 (lower is better)
Translates to: LQILSGPEPPEALRPARTEHPNP*SHVALC
Trigger: ACAAAGTGCAACATGGGATCATGGGTTGGGGTGCTC...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGGCATGTGGTCAGGAGTaGGCGCGTGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLACGQE*AREQRL
Trigger: TAGCCGCTGCTCACGCGCTCACTCCTGACCACATGC...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGAACTGAGGGCAGAGGATaGAGCACATGGGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRTEGRG*STWATK
Trigger: TTTTGTGGCCCATGTGCTGCATCCTCTGCCCTCAGT...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR GCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCGCGTTGGGGGCCAGTTaGACACTGAGGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSALGAS*TLRAED
Trigger: ATCCTCTGCCCTCAGTGTGCAACTGGCCCCCAACGC...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR GCA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACATGTTTGCGCCGAGGTTaGTCCCGTTCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LQILSGPEPPEALRPARTCLRRG*SRSVVS
Trigger: TGACACAACAGAACGGGAGCAACCTCGGCGCAAACA...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACTCCGGCGGGAGTGTTTaGGCCGAGGTTGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHSGGSV*AEVAPV
Trigger: AACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGA...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCTCCGGCGGGAGTGTTTaGGCCGAGGTTGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: LKQVTSQVQAIVQILIEGSGGSV*AEVAPV
Trigger: AACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGA...GCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTGTGGTCACTGCCACTaGCTGACCGGTGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQCGHCH*LTGAGS
Trigger: GGAGCCTGCACCGGTCAGGCAGTGGCAGTGACCACA...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCCCTCCTTGTGGTCACTaGCACTGCCTGACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSPPCGH*HCLTGA
Trigger: TGCACCGGTCAGGCAGTGGCAGTGACCACAAGGAGG...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGTGGACTCGGAGCGCATaGGGCTCAGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQWTRSA*GSAAAC
Trigger: ACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCA...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTTCCAGCTGGTACACCTaGATGCCGCAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPSSWYT*MPQTLT
Trigger: CGTCAGGGTCTGCGGCATGCAGGTGTACCAGCTGGA...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAATGTTGCTGGGGCTGGTaGTGGGGCCACAGGATGACG +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQCCWGW*WGHRMT
Trigger: CGTCATCCTGTGGCCCCAGCACCAGCCCCAGCAACA...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGTGTTGCTGGGGCTGGTaGTGGGGCCACAGGATGACG +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLCCWGW*WGHRMT
Trigger: CGTCATCCTGTGGCCCCAGCACCAGCCCCAGCAACA...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCTGTCTGGCCCATCATaGACGGTGGGGTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: AQTGHVAGPGHCADIDRGLSGPS*TVGSSR
Trigger: CCGGGATGACCCCACCGTGCATGATGGGCCAGACAG...CCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCAGAGGGCGTGTGGTCTaGCCTCCTTCACTTTATATA +
Preference number: 4 (lower is better)
Translates to: GCSFARCEEQQNAAASPPRGRVV*PPSLYI
Trigger: TATATAAAGTGAAGGAGGGCAGACCACACGCCCTCT...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHAPCPC*QAHQGH
Trigger: GTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGC...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCTCACGTGCCAACAGGTaGCTGGGGAACCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARASRANR*LGNPGA
Trigger: GGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGA...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGTGCCAACCTGTCACGTaGCAACAGGTGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRCQPVT*QQVPGE
Trigger: TTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCA...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGACAGCAGCAGCACAGCTaGCGAAACTTGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRQQQHS*RNLRKK
Trigger: CTTCTTCCTCAAGTTTCGGCAGCTGTGCTGCTGCTG...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAGAGCCCTTAAGAGGCTaGATCTTTAAGGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTEPLRG*IFKDQE
Trigger: TTCCTGGTCCTTAAAGATGCAGCCTCTTAAGGGCTC...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTGTCCGCCTACTTGGTaGATGAAGGGCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QHSFQAPQFAQDRLKQVTCPPTW*MKGSRR
Trigger: CCTCCTGGAGCCCTTCATCCACCAAGTAGGCGGACA...CGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp GGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGTGCAAGGCTCCAGGGGTTGTaGCTGATCTTCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GPSCTVGSSRKPLNVLCARLQGL*LIFSEL
Trigger: GAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCT...TGCACACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTGCTGGGGCTGGTGCTaGGGCCACAGGATGACGCCA +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACCWGWC*GHRMTP
Trigger: TGGCGTCATCCTGTGGCCCCAGCACCAGCCCCAGCA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTGGTGTTGCTGGGGCTaGTGCTGGGGCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCWCCWG*CWGHRM
Trigger: CATCCTGTGGCCCCAGCACCAGCCCCAGCAACACCA...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACTGCGGACATCCACCTTaGGCTGAGAGGAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHCGHPP*AERRDP
Trigger: CGGGTCCCTCCTCTCAGCCCAAGGTGGATGTCCGCA...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGCCCATCATGCACGGTaGGGTCATCCCGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRAHHAR*GHPGSP
Trigger: AGGGCTTCCGGGATGACCCCACCGTGCATGATGGGC...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGCACGTAGCCTCTGTCTaGCCCATCATGCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLHVASV*PIMHGG
Trigger: CCCACCGTGCATGATGGGCCAGACAGAGGCTACGTG...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCCAGAACAGGGCCTACTaGTTCTCGTCCCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: QPCGALRAPIKELADTHSQNRAY*FSSRIC
Trigger: ACAGATGCGGGACGAGAACCAGTAGGCCCTGTTCTG...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGAGAGGAAGGGGTTCTaGGGGCCCAGAACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQERKGF*GPRTGP
Trigger: AGGCCCTGTTCTGGGCCCCCAGAACCCCTTCCTCTC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCCTTCCTAAGGCAGCCTaGACACACCAGTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSLPKAA*THQSEP
Trigger: TGGCTCTGACTGGTGTGTCCAGGCTGCCTTAGGAAG...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGGGAACAAGGGAAGAGTaGGCGTGGAGGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLGTREE*AWRGPA
Trigger: TGCAGGGCCCCTCCACGCCCACTCTTCCCTTGTTCC...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGTGCCAACAGGTGCCTaGGGAACCCAGGCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPVPTGA*GTQAPP
Trigger: GGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCAC...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAGCTGAAGCCACAGAATaGTACAGGAGAGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTAEATE*YRREDC
Trigger: ACAGTCTTCTCTCCTGTACCATTCTGTGGCTTCAGC...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGGCCAGTTGCACACTaGGGGCAGAGGATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAGPVAH*GQRMQH
Trigger: GTGCTGCATCCTCTGCCCTCAGTGTGCAACTGGCCC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGACCCACTTCCATGGTTTaGCAAACACACATTGCGTTG +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGPTSMV*QTHIAL
Trigger: CAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGG...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGACTTTGTATTCAGGGGTaGACTCCTTCATTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGLCIQG*TPSFRE
Trigger: CTCCCGAAATGAAGGAGTTCACCCCTGAATACAAAG...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR TCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGTCACTGCCACTGCCTaGCCGGTGCAGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALVTATA*PVQAPA
Trigger: CGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGAC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCTGGAAAGGGACCTCTaGGTGGCTGTGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQLERDL*VAVQLH
Trigger: GTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAG...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGCTGGAAAGGGACCTCTaGGTGGCTGTGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLLERDL*VAVQLH
Trigger: GTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAG...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGCTGCCTTCTCAGCTaGCGCGTCATCGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAGCLLS*RVIAML
Trigger: CAGCATGGCGATGACGCGTCAGCTGAGAAGGCAGCC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGGCTGCCTTCTCAGCTaGCGCGTCATCGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACGCLLS*RVIAML
Trigger: CAGCATGGCGATGACGCGTCAGCTGAGAAGGCAGCC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAGACGCCCAGCGTGGCTaGTGTGCTCTGCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQDAQRG*CALLAF
Trigger: AAATGCGAGCAGAGCACATCAGCCACGCTGGGCGTC...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGACGCCCAGCGTGGCTaGTGTGCTCTGCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRDAQRG*CALLAF
Trigger: AAATGCGAGCAGAGCACATCAGCCACGCTGGGCGTC...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTGGGGCCACAGGATaGCGCCACCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPAGATG*RHLREH
Trigger: GTGCTCCCTGAGGTGGCGTCATCCTGTGGCCCCAGC...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTCAGAGCCACAAAGCTaGGGAGCCTGGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQSEPQS*GAWLRG
Trigger: CCCTCTCAGCCAGGCTCCTCAGCTTTGTGGCTCTGA...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTCTTGGCCTGGGGAAATaGGACCCTGAGCGGACCACA +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCLGLGK*DPERTT
Trigger: TGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAG...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACCTTGGCCTGGGGAAATaGGACCCTGAGCGGACCACA +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHLGLGK*DPERTT
Trigger: TGTGGTCCGCTCAGGGTCTCATTTCCCCAGGCCAAG...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGCCCCACTCTAAGGGTTaGGGGCCATATTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLPHSKG*GPYSRP
Trigger: GGGCCTAGAATATGGCCCTCAACCCTTAGAGTGGGG...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCAACCTTGGCAATGGCTaGAATCGGTGTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSNLGNG*NRCHLL
Trigger: CAGGAGGTGACACCGATTTCAGCCATTGCCAAGGTT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACATAATCATAGGGCCGTaGCACCGGCCTGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHIIIGP*HRPAWL
Trigger: GAGCCAGGCAGGCCGGTGTCACGGCCCTATGATTAT...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATCCAGCTCCCGGCGCTaGCCACTGGGTACGGATCAA +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPASSSRR*PLGTDQ
Trigger: TTGATCCGTACCCAGTGGGCAGCGCCGGGAGCTGGA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
CDS-3UTR GCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCCACTGCCTGACCGGTaGAGGCTCCGGCGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPPLPDR*RLRREC
Trigger: ACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTGTGGTCACTGCCACTaGCTGACCGGTGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACCGHCH*LTGAGS
Trigger: GGAGCCTGCACCGGTCAGGCAGTGGCAGTGACCACA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATGTGGTCACTGCCACTaGCTGACCGGTGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPACGHCH*LTGAGS
Trigger: GGAGCCTGCACCGGTCAGGCAGTGGCAGTGACCACA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAAACTCAAGCCACTGTTaGCATCTAGCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTNSSHC*HLASGK
Trigger: CTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTT...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTGGACTCGGAGCGCATaGGGCTCAGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQWTRSA*GSAAAC
Trigger: ACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCA...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCGCCATGCTGCCGCGTaGCCATCTTCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQRHAAA*PSSGPT
Trigger: TGTTGGACCTGAAGATGGGCACGCGGCAGCATGGCG...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCCGCCATGCTGCCGCGTaGCCATCTTCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: LKQVTSQVQAIVQILIEGRHAAA*PSSGPT
Trigger: TGTTGGACCTGAAGATGGGCACGCGGCAGCATGGCG...GCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGACGCGTCATCGCCATaGTGCCGCGTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACDASSP*CRVPIF
Trigger: GAAGATGGGCACGCGGCAGCATGGCGATGACGCGTC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTTCGCATTTCCGCATCTaGCGGGCTGCCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPSHFRI*RAAFSA
Trigger: AGCTGAGAAGGCAGCCCGGCAGATGCGGAAATGCGA...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTCCAGCTGGTACACCTaGATGCCGCAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQSSWYT*MPQTLT
Trigger: CGTCAGGGTCTGCGGCATGCAGGTGTACCAGCTGGA...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000613416.4
CDS-3UTR GCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGTCCAGCTGGTACACCTaGATGCCGCAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLSSWYT*MPQTLT
Trigger: CGTCAGGGTCTGCGGCATGCAGGTGTACCAGCTGGA...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCAGCACCATGTCCAGGTaGTTGAGACGCATCTCAGAC +
Preference number: 4 (lower is better)
Translates to: QPCGALRAPIKELADTHSSTMSR*LRRISD
Trigger: GTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCT...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACTGTCTGGCCCATCATaGACGGTGGGGTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPALSGPS*TVGSSR
Trigger: CCGGGATGACCCCACCGTGCATGATGGGCCAGACAG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCTGTCTGGCCCATCATaGACGGTGGGGTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACLSGPS*TVGSSR
Trigger: CCGGGATGACCCCACCGTGCATGATGGGCCAGACAG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGAAGAGGGCGTGTGGTCTaGCCTCCTTCACTTTATATA +
Preference number: 4 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGRGRVV*PPSLYI
Trigger: TATATAAAGTGAAGGAGGGCAGACCACACGCCCTCT...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCACCCTGTCCCTGCTaGCAAGCCCACCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPAPCPC*QAHQGH
Trigger: GTGCCCCTGGTGGGCTTGGCAGCAGGGACAGGGTGC...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGATGGGTCCAGCTTTGTaGAGTCAGCCCTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLMGPAL*SQPCGA
Trigger: GGCACCACAGGGCTGACTGCACAAAGCTGGACCCAT...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACCCAGGCGCCGCCCTCTaGCATAAGTTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHPGAAL*HKLASA
Trigger: GGCTGAGGCCAACTTATGGCAGAGGGCGGCGCCTGG...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGTGCCAACCTGTCACGTaGCAACAGGTGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLCQPVT*QQVPGE
Trigger: TTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCA...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTCGCCTCACAAAGGGCTaGTGCCTTGAACTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPRLTKG*CLELGL
Trigger: CAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCG...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTCCCGGCGCTGCCCACTaGGTACGGATCAACAACAAG +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCPGAAH*VRINNK
Trigger: CTTGTTGTTGATCCGTACCCAGTGGGCAGCGCCGGG...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGTGTCCGCCTACTTGGTaGATGAAGGGCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLCPPTW*MKGSRR
Trigger: CCTCCTGGAGCCCTTCATCCACCAAGTAGGCGGACA...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAAGAGCTTTCGGTCCTTaGACTCGGAGCGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRRAFGP*TRSACG
Trigger: GCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCT...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATGGTGTTGCTGGGGCTaGTGCTGGGGCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAWCCWG*CWGHRM
Trigger: CATCCTGTGGCCCCAGCACCAGCCCCAGCAACACCA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATGCGGACATCCACCTTaGGCTGAGAGGAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPACGHPP*AERRDP
Trigger: CGGGTCCCTCCTCTCAGCCCAAGGTGGATGTCCGCA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTGCGGACATCCACCTTaGGCTGAGAGGAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACCGHPP*AERRDP
Trigger: CGGGTCCCTCCTCTCAGCCCAAGGTGGATGTCCGCA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTGCCCATCATGCACGGTaGGGTCATCCCGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPAHHAR*GHPGSP
Trigger: AGGGCTTCCGGGATGACCCCACCGTGCATGATGGGC...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCCCATCATGCACGGTaGGGTCATCCCGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAAHHAR*GHPGSP
Trigger: AGGGCTTCCGGGATGACCCCACCGTGCATGATGGGC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGCCCATCATGCACGGTaGGGTCATCCCGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACAHHAR*GHPGSP
Trigger: AGGGCTTCCGGGATGACCCCACCGTGCATGATGGGC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAACACGTAGCCTCTGTCTaGCCCATCATGCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQHVASV*PIMHGG
Trigger: CCCACCGTGCATGATGGGCCAGACAGAGGCTACGTG...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGACACGTAGCCTCTGTCTaGCCCATCATGCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRHVASV*PIMHGG
Trigger: CCCACCGTGCATGATGGGCCAGACAGAGGCTACGTG...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGAGAGGAAGGGGTTCTaGGGGCCCAGAACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACERKGF*GPRTGP
Trigger: AGGCCCTGTTCTGGGCCCCCAGAACCCCTTCCTCTC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTAGGGAAGAGTGGGCGTaGAGGGGCCCTGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPREEWA*RGPAPA
Trigger: GGCTGGTGCAGGGCCCCTCCACGCCCACTCTTCCCT...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGGAACAAGGGAAGAGTaGGCGTGGAGGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACGTREE*AWRGPA
Trigger: TGCAGGGCCCCTCCACGCCCACTCTTCCCTTGTTCC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGCCCACTTCAGTGGGGTaGGAGGGAGTGGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLPTSVG*EGVAFL
Trigger: TAAGAAGGCCACTCCCTCCCACCCCACTGAAGTGGG...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATCCCAAGGGACGGGCTaGCAGCCGGACACATGGACA +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPASQGTG*QPDTWT
Trigger: TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCCCACAGAAATGGTGCTaGGTCAACAGGGAAACACCA +
Preference number: 4 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPPQKWC*VNRETP
Trigger: TGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGG...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGGGGCTACTGCCCCCATaGCTGAAGCCACAGAATGGT +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLGLLPP*LKPQNG
Trigger: ACCATTCTGTGGCTTCAGCCATGGGGGCAGTAGCCC...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGAGGGGTGGGGTCCCTaGCAAGTTGCTACACTGGTC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQEGWGP*QVATLV
Trigger: GACCAGTGTAGCAACTTGCCAGGGACCCCACCCCTC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 72 bp AGTGTGGCCCTAGGCTCAAAGGAGAGGGTGCTAACCTaGGCAATGGCTGAAATCGGTGTCACCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SVALGSKERVLT*AMAEIGVTSWP
Trigger: TGGCCAGGAGGTGACACCGATTTCAGCCATTGCCAAGGTTAGCACCCTCTCCTTTGAGCCTAGGGCCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGGCAGCACAGGTGGCTaGGCACCGCTACAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALGSTGG*APLQRP
Trigger: AGGCCGCTGTAGCGGTGCTCAGCCACCTGTGCTGCC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR TCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCGATAGGCCACTAAGTTaGTGTAACCATCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPDRPLS*CNHHCP
Trigger: GGGACAGTGATGGTTACATCAACTTAGTGGCCTATC...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGAGATAGGCCACTAAGTTaGTGTAACCATCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRDRPLS*CNHHCP
Trigger: GGGACAGTGATGGTTACATCAACTTAGTGGCCTATC...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACGGCTGCCTTCTCAGCTaGCGCGTCATCGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHGCLLS*RVIAML
Trigger: CAGCATGGCGATGACGCGTCAGCTGAGAAGGCAGCC...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGACGCCCAGCGTGGCTaGTGTGCTCTGCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPADAQRG*CALLAF
Trigger: AAATGCGAGCAGAGCACATCAGCCACGCTGGGCGTC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTCAGAGCCACAAAGCTaGGGAGCCTGGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACSEPQS*GAWLRG
Trigger: CCCTCTCAGCCAGGCTCCTCAGCTTTGTGGCTCTGA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAAGCCCTGTGGTGCCCTaGGGGCACCTATTAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRSPVVP*GHLLKS
Trigger: GCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCT...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGACAGCTGCCGAAACTTaGGGAAGAAGACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLTAAET*GRRLPP
Trigger: GGGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGT...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGCGTTGGGGGCCAGTTaGACACTGAGGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACALGAS*TLRAED
Trigger: ATCCTCTGCCCTCAGTGTGCAACTGGCCCCCAACGC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCCTCCTTGTGGTCACTaGCACTGCCTGACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACPPCGH*HCLTGA
Trigger: TGCACCGGTCAGGCAGTGGCAGTGACCACAAGGAGG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTTGGACTCGGAGCGCATaGGGCTCAGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPWTRSA*GSAAAC
Trigger: ACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCA...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATGGACTCGGAGCGCATaGGGCTCAGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAWTRSA*GSAAAC
Trigger: ACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACGCCATGCTGCCGCGTaGCCATCTTCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPARHAAA*PSSGPT
Trigger: TGTTGGACCTGAAGATGGGCACGCGGCAGCATGGCG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGTCGCATTTCCGCATCTaGCGGGCTGCCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLSHFRI*RAAFSA
Trigger: AGCTGAGAAGGCAGCCCGGCAGATGCGGAAATGCGA...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACCTGTCTGGCCCATCATaGACGGTGGGGTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHLSGPS*TVGSSR
Trigger: CCGGGATGACCCCACCGTGCATGATGGGCCAGACAG...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCATTGCGGAAGCCCAGAACAATGGTCCCTaGCTGCAGTGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TSQVQAIVQILIEGIAEAQNNGP*LQWRGR
Trigger: CCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTG...GGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTGCCAACCTGTCACGTaGCAACAGGTGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQCQPVT*QQVPGE
Trigger: TTCCCCAGGCACCTGTTGGCACGTGACAGGTTGGCA...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCTCACAAAGGGCTGCTaGCTTGAACTTGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQLTKGC*LELGLG
Trigger: CCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAG...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCAGAATGTGGGCACCTaGACCCAGGGCCCATACCAC +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARAQNVGT*TQGPYH
Trigger: GTGGTATGGGCCCTGGGTGCAGGTGCCCACATTCTG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCTCCTCAAGCCCTCACTaGCCCACTCTAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSSSSPH*PTLRVE
Trigger: CTCAACCCTTAGAGTGGGGCAGTGAGGGCTTGAGGA...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACCCGGCGCTGCCCACTaGGTACGGATCAACAACAAG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAPGAAH*VRINNK
Trigger: CTTGTTGTTGATCCGTACCCAGTGGGCAGCGCCGGG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAAGAGCTTTCGGTCCTTaGACTCGGAGCGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPARAFGP*TRSACG
Trigger: GCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCT...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGCAGGGGTACTTGAAGTaGTGCACCACGTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: EREGLQFPEKQKNQVLPRQGYLK*CTTFSS
Trigger: GCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTG...CCTGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACACGTAGCCTCTGTCTaGCCCATCATGCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAHVASV*PIMHGG
Trigger: CCCACCGTGCATGATGGGCCAGACAGAGGCTACGTG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGCTTCCTAAGGCAGCCTaGACACACCAGTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQLPKAA*THQSEP
Trigger: TGGCTCTGACTGGTGTGTCCAGGCTGCCTTAGGAAG...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAGTGCCAACAGGTGCCTaGGGAACCCAGGCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKVPTGA*GTQAPP
Trigger: GGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCAC...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCTCATTAGCAGAATGTaGGCACCTGCACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQLISRM*APAPRA
Trigger: GGCCCTGGGTGCAGGTGCCCACATTCTGCTAATGAG...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCATGTGGAGGAAGGGCATaGGGCAAAAGCTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPCGGRA*GKSSPQ
Trigger: CTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACA...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCCCAGCCCCAAAGAATaGGAACCTGCCCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARAPSPKE*EPAHQW
Trigger: CCACTGGTGGGCAGGTTCCCATTCTTTGGGGCTGGG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGGGCTACTGCCCCCATaGCTGAAGCCACAGAATGGT +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHGLLPP*LKPQNG
Trigger: ACCATTCTGTGGCTTCAGCCATGGGGGCAGTAGCCC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTTTCGGTCAGAGAAGCTaGTTTCCCGCTACTAGCCGG +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPFGQRS*FPATSR
Trigger: CCGGCTAGTAGCGGGAAACCAGCTTCTCTGACCGAA...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613416.4
3UTR CAA 72 bp AGGGCTCACCTGAGCACCCCAACCCATGATCCCATGTaGCACTTTGTTCCCAAGTTGGGGCTAAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RAHLSTPTHDPM*HFVPKLGLRRL
Trigger: CAGCCTTCTTAGCCCCAACTTGGGAACAAAGTGCAACATGGGATCATGGGTTGGGGTGCTCAGGTGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCCTTTGTATTCAGGGGTaGACTCCTTCATTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: QPCGALRAPIKELADTHSLCIQG*TPSFRE
Trigger: CTCCCGAAATGAAGGAGTTCACCCCTGAATACAAAG...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR TCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGACTCTTTGCCTCCTGTaGGCTCTCAGAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLTLCLL*ALRGLK
Trigger: CTTGAGACCTCTGAGAGCTCACAGGAGGCAAAGAGT...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACCTGGAAAGGGACCTCTaGGTGGCTGTGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHLERDL*VAVQLH
Trigger: GTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAG...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGTCCAGGGGTTGTGGCTaGTCTTCTCAGAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQSRGCG*SSQNSS
Trigger: GCTTGAGTTCTGAGAAGATCAGCCACAACCCCTGGA...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACACACGCAGGGGTACTTaGAGTGGTGCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHTRRGT*SGAPRS
Trigger: AGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGT...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGGCTGCCTTCTCAGCTaGCGCGTCATCGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPGCLLS*RVIAML
Trigger: CAGCATGGCGATGACGCGTCAGCTGAGAAGGCAGCC...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTCAGAGCCACAAAGCTaGGGAGCCTGGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHSEPQS*GAWLRG
Trigger: CCCTCTCAGCCAGGCTCCTCAGCTTTGTGGCTCTGA...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCAGCCCTGTGGTGCCCTaGGGGCACCTATTAAAGAGC +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARASPVVP*GHLLKS
Trigger: GCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCT...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGGCAAGGGAACTTGGTaGGAGAGGCTGTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPGKGTW*ERLFQE
Trigger: TTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGCC...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTCCCCACTCTAAGGGTTaGGGGCCATATTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPPHSKG*GPYSRP
Trigger: GGGCCTAGAATATGGCCCTCAACCCTTAGAGTGGGG...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCAACCTTGGCAATGGCTaGAATCGGTGTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSNLGNG*NRCHLL
Trigger: CAGGAGGTGACACCGATTTCAGCCATTGCCAAGGTT...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGAGCACCCCAACCCATaGTCCCATGTTGCACTTTGT +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPEHPNP*SHVALC
Trigger: ACAAAGTGCAACATGGGATCATGGGTTGGGGTGCTC...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTTCCAGCTCCCGGCGCTaGCCACTGGGTACGGATCAA +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPSSSRR*PLGTDQ
Trigger: TTGATCCGTACCCAGTGGGCAGCGCCGGGAGCTGGA...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
CDS-3UTR GCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCACCCGACTTGCATTCTTaGCATACTGCCCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPPDLHS*HTAPLP
Trigger: TGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGG...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR GCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTTCCGGCGGGAGTGTTTaGGCCGAGGTTGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPSGGSV*AEVAPV
Trigger: AACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGA...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAACCTCTGAGTGGCTGTaGAGCTCCACCTTCGGACTC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPATSEWL*SSTFGL
Trigger: GAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGT...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGTGCAAACTCAAGCCACTGTTaGCATCTAGCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GPSCTVGSSRKPLNVLCANSSHC*HLASGK
Trigger: CTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTT...TGCACACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACCGCCATGCTGCCGCGTaGCCATCTTCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHRHAAA*PSSGPT
Trigger: TGTTGGACCTGAAGATGGGCACGCGGCAGCATGGCG...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATCGCATTTCCGCATCTaGCGGGCTGCCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPASHFRI*RAAFSA
Trigger: AGCTGAGAAGGCAGCCCGGCAGATGCGGAAATGCGA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGGTGGCTGATGTGCTCTaGTCGCATTTCCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: ARELGERGCFRNRTGANLVADVL*SHFRIC
Trigger: GCAGATGCGGAAATGCGAGCAGAGCACATCAGCCAC...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACCAGCGTGGCTGATGTaGTCTGCTCGCATTTCCGCA +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAPAWLM*SARISA
Trigger: TGCGGAAATGCGAGCAGAGCACATCAGCCACGCTGG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCATTGATAGAGGGCATTaGGGAAGCCTTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPIDRGH*GSLQWR
Trigger: TCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAAT...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTTGTTGCTGGGGCTGGTaGTGGGGCCACAGGATGACG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPCCWGW*WGHRMT
Trigger: CGTCATCCTGTGGCCCCAGCACCAGCCCCAGCAACA...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCAGAACAATGGTCCCTaGCTGCAGTGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQQNNGP*LQWRGR
Trigger: CCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTG...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGCAGCAGCAGCACAGCTaGCGAAACTTGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQQQQHS*RNLRKK
Trigger: CTTCTTCCTCAAGTTTCGGCAGCTGTGCTGCTGCTG...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCAAAGAATGGGAACCTaGCCACCAGTGGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARAQRMGT*PPVAPG
Trigger: CCCTGGTGCCACTGGTGGGCAGGTTCCCATTCTTTG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGGCAGGCAGCACAGGTaGCTGAGCACCGCTACAGCG +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALGRQHR*LSTATA
Trigger: CGCTGTAGCGGTGCTCAGCCACCTGTGCTGCCTGCC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR CCA 90 bp CCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTAGAGGATGCAGCACATaGGCCACAAAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: PQFAQDRLKQVTSQVQAIRGCST*ATKGEL
Trigger: TAGCTCTCCTTTTGTGGCCCATGTGCTGCATCCTCT...AATGGCCTGGACCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTGTCCGCCTACTTGGTaGATGAAGGGCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACCPPTW*MKGSRR
Trigger: CCTCCTGGAGCCCTTCATCCACCAAGTAGGCGGACA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGAAAGGGACCTCTGAGTaGCTGTGCAGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQKGTSE*LCSSTF
Trigger: GAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTT...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCCAGGGGTACTTGAAGTaGTGCACCACGTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSQGYLK*CTTFSS
Trigger: GCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTG...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCCATCATGCACGGTaGGGTCATCCCGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPAHHAR*GHPGSP
Trigger: AGGGCTTCCGGGATGACCCCACCGTGCATGATGGGC...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGAGAGGAAGGGGTTCTaGGGGCCCAGAACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPERKGF*GPRTGP
Trigger: AGGCCCTGTTCTGGGCCCCCAGAACCCCTTCCTCTC...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPASSEQ*SLPAVE
Trigger: CTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGC...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPASSEQ*SLPAVE
Trigger: CTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGC...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTGGTCAGACCGAAGGATaGGTCCAGCTTTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCGQTEG*VQLCAV
Trigger: GACTGCACAAAGCTGGACCCATCCTTCGGTCTGACC...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCACCCTCTGCCATAAGTTaGCCTCAGCCCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPPSAIS*PQPSFI
Trigger: AATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGG...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAGCCTTGAACTTGGCCTaGGGAAATGAGACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQALNLA*GNETLS
Trigger: GCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGC...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGCCTTGAACTTGGCCTaGGGAAATGAGACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQALNLA*GNETLS
Trigger: GCTCAGGGTCTCATTTCCCCAGGCCAAGTTCAAGGC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGATCGGTGTCACCTCCTaGCCATCTGTTAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLIGVTS*PSVRSS
Trigger: GCTGCTTCTAACAGATGGCCAGGAGGTGACACCGAT...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCAGAATCGAGGAATCTaGGAGGCACAGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQQNRGI*EAQDIP
Trigger: GGGGATGTCCTGTGCCTCCCAGATTCCTCGATTCTG...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACGAGGGGTGGGGTCCCTaGCAAGTTGCTACACTGGTC +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHEGWGP*QVATLV
Trigger: GACCAGTGTAGCAACTTGCCAGGGACCCCACCCCTC...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGGGCAGCACAGGTGGCTaGGCACCGCTACAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMGSTGG*APLQRP
Trigger: AGGCCGCTGTAGCGGTGCTCAGCCACCTGTGCTGCC...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR TCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGGGCCAGTTGCACACTaGGGGCAGAGGATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALGPVAH*GQRMQH
Trigger: GTGCTGCATCCTCTGCCCTCAGTGTGCAACTGGCCC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAACACGCAGGGGTACTTaGAGTGGTGCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPATRRGT*SGAPRS
Trigger: AGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGT...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTCATCCCGGAAGCCCTTaGATGTGCTGTGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCHPGSP*MCCVQS
Trigger: ACTTTGCACACAGCACATTCAAGGGCTTCCGGGATG...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTGGCAAGGGAACTTGGTaGGAGAGGCTGTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCGKGTW*ERLFQE
Trigger: TTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGCC...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAAACCTTGGCAATGGCTaGAATCGGTGTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQNLGNG*NRCHLL
Trigger: CAGGAGGTGACACCGATTTCAGCCATTGCCAAGGTT...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAATGTTTGCGCCGAGGTTaGTCCCGTTCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQCLRRG*SRSVVS
Trigger: TGACACAACAGAACGGGAGCAACCTCGGCGCAAACA...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCTGTTTGCGCCGAGGTTaGTCCCGTTCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LKQVTSQVQAIVQILIEGCLRRG*SRSVVS
Trigger: TGACACAACAGAACGGGAGCAACCTCGGCGCAAACA...GCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTGTTTGCGCCGAGGTTaGTCCCGTTCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCCLRRG*SRSVVS
Trigger: TGACACAACAGAACGGGAGCAACCTCGGCGCAAACA...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGGGTACTTGAAGTGGTaGACCACGTTCTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQGYLKW*TTFSSR
Trigger: CCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTGGCTGATGTGCTCTaGTCGCATTTCCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAVADVL*SHFRIC
Trigger: GCAGATGCGGAAATGCGAGCAGAGCACATCAGCCAC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCATTGATAGAGGGCATTaGGGAAGCCTTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: SGGGDRLSFQERAAESDSIDRGH*GSLQWR
Trigger: TCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAAT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTAGCACCATGTCCAGGTaGTTGAGACGCATCTCAGAC +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCSTMSR*LRRISD
Trigger: GTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCT...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGAGCACCATGTCCAGGTaGTTGAGACGCATCTCAGAC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQSTMSR*LRRISD
Trigger: GTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCT...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTGCAAAGTCAATCATaGGGACATCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQVQSQS*GHPPWA
Trigger: AGCCCAAGGTGGATGTCCGCATGATTGACTTTGCAC...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACAGAACAATGGTCCCTaGCTGCAGTGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAQNNGP*LQWRGR
Trigger: CCTTCCTCTCCACTGCAGGCAGGGACCATTGTTCTG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGACAATCAGCAGGGCCCTaGAGCCACAGATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRQSAGP*SHRSQR
Trigger: TCTTTGAGATCTGTGGCTGCAGGGCCCTGCTGATTG...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACCGCCTCACAAAGGGCTaGTGCCTTGAACTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHRLTKG*CLELGL
Trigger: CAGGCCAAGTTCAAGGCAGCAGCCCTTTGTGAGGCG...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCACAGAAATGGTaGTGGGTCAACAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRGPQKW*WVNRET
Trigger: TGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCC...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATCCTCAAGCCCTCACTaGCCCACTCTAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPASSSPH*PTLRVE
Trigger: CTCAACCCTTAGAGTGGGGCAGTGAGGGCTTGAGGA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTCAGTGGCAGACAGTATaGACACACACTTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: THSTRTANTVWARATRGPQWQTV*THTCPL
Trigger: TAGTGGGCAAGTGTGTGTGCATACTGTCTGCCACTG...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCACAGTGGCAGACAGTATaGACACACACTTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPQWQTV*THTCPL
Trigger: TAGTGGGCAAGTGTGTGTGCATACTGTCTGCCACTG...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACAATCCCCATGCTCACTaGACAGGCCCAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHNPHAH*TGPERE
Trigger: CTCCCTCTCTGGGCCTGTGCAGTGAGCATGGGGATT...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCACTACATAGAAGGTCCTaGCCAGGTGAAAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPLHRRS*PGESQW
Trigger: CCATTGGCTTTCACCTGGCCAGGACCTTCTATGTAG...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACCAGGGGTACTTGAAGTaGTGCACCACGTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHQGYLK*CTTFSS
Trigger: GCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTG...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTTGCCCTGTGTCCAGCTaGTACACCTGCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPCPVSS*YTCMPQ
Trigger: CTGCGGCATGCAGGTGTACCAGCTGGACACAGGGCA...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000613416.4
CDS-3UTR CCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTTGCCCTGTGTCCAGCTaGTACACCTGCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPCPVSS*YTCMPQ
Trigger: CTGCGGCATGCAGGTGTACCAGCTGGACACAGGGCA...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPACGSLQ*RAHGHS
Trigger: ACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACAGAACAGGGCCTACTaGTTCTCGTCCCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAQNRAY*FSSRIC
Trigger: ACAGATGCGGGACGAGAACCAGTAGGCCCTGTTCTG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHASSEQ*SLPAVE
Trigger: CTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQASSEQ*SLPAVE
Trigger: CTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTAAAGCCCCCAAGAAATaGGCACCCAGAGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPKAPKK*APRALY
Trigger: GTAGAGGGCTCTGGGTGCCCATTTCTTGGGGGCTTT...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGACCCTCTGCCATAAGTTaGCCTCAGCCCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRPSAIS*PQPSFI
Trigger: AATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGG...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATGTGGAGGAAGGGCATaGGGCAAAAGCTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPACGGRA*GKSSPQ
Trigger: CTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCCCAGCCCCAAAGAATaGGAACCTGCCCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPPSPKE*EPAHQW
Trigger: CCACTGGTGGGCAGGTTCCCATTCTTTGGGGCTGGG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCAGAATCGAGGAATCTaGGAGGCACAGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARAQNRGI*EAQDIP
Trigger: GGGGATGTCCTGTGCCTCCCAGATTCCTCGATTCTG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACTCTTTGCCTCCTGTaGGCTCTCAGAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACTLCLL*ALRGLK
Trigger: CTTGAGACCTCTGAGAGCTCACAGGAGGCAAAGAGT...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATCCAGGGGTTGTGGCTaGTCTTCTCAGAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPASRGCG*SSQNSS
Trigger: GCTTGAGTTCTGAGAAGATCAGCCACAACCCCTGGA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCTCCAGGGGTTGTGGCTaGTCTTCTCAGAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARASRGCG*SSQNSS
Trigger: GCTTGAGTTCTGAGAAGATCAGCCACAACCCCTGGA...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACAGCATGCCGCAGACCCTaGCGCCCAGCGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTACRRP*RPAWLM
Trigger: CATCAGCCACGCTGGGCGTCAGGGTCTGCGGCATGC...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCATCCCGGAAGCCCTTaGATGTGCTGTGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACHPGSP*MCCVQS
Trigger: ACTTTGCACACAGCACATTCAAGGGCTTCCGGGATG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACATCCCGGAAGCCCTTaGATGTGCTGTGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAHPGSP*MCCVQS
Trigger: ACTTTGCACACAGCACATTCAAGGGCTTCCGGGATG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAGCATGTGGTCAGGAGTaGGCGCGTGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKACGQE*AREQRL
Trigger: TAGCCGCTGCTCACGCGCTCACTCCTGACCACATGC...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATGTTTGCGCCGAGGTTaGTCCCGTTCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPACLRRG*SRSVVS
Trigger: TGACACAACAGAACGGGAGCAACCTCGGCGCAAACA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAATCCGGCGGGAGTGTTTaGGCCGAGGTTGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKSGGSV*AEVAPV
Trigger: AACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGA...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTACCTCTGAGTGGCTGTaGAGCTCCACCTTCGGACTC +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPTSEWL*SSTFGL
Trigger: GAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGT...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTGGGTACTTGAAGTGGTaGACCACGTTCTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPGYLKW*TTFSSR
Trigger: CCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCC...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTATCCAGCTGGTACACCTaGATGCCGCAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALSSWYT*MPQTLT
Trigger: CGTCAGGGTCTGCGGCATGCAGGTGTACCAGCTGGA...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGTGCAAAGTCAATCATaGGGACATCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRVQSQS*GHPPWA
Trigger: AGCCCAAGGTGGATGTCCGCATGATTGACTTTGCAC...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCGTGCAAAGTCAATCATaGGGACATCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKQVTSQVQAIVQILIEGVQSQS*GHPPWA
Trigger: AGCCCAAGGTGGATGTCCGCATGATTGACTTTGCAC...GCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGTGCAAAGTCAATCATaGGGACATCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQVQSQS*GHPPWA
Trigger: AGCCCAAGGTGGATGTCCGCATGATTGACTTTGCAC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCAATCAGCAGGGCCCTaGAGCCACAGATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACQSAGP*SHRSQR
Trigger: TCTTTGAGATCTGTGGCTGCAGGGCCCTGCTGATTG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGCCAGGCGCCGCCCTCTaGCATAAGTTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMPGAAL*HKLASA
Trigger: GGCTGAGGCCAACTTATGGCAGAGGGCGGCGCCTGG...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAACTGAATGTAAGTGGGTaGAGCTTTGCTCGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQLNVSG*SFARCE
Trigger: CTCACAGCGAGCAAAGCTGCACCCACTTACATTCAG...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGACAGTGGCAGACAGTATaGACACACACTTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRQWQTV*THTCPL
Trigger: TAGTGGGCAAGTGTGTGTGCATACTGTCTGCCACTG...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTTGCCATCTAGCATCTaGAAAGGGACCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCLPSSI*KGTSEW
Trigger: CCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAA...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCTTGCCATCTAGCATCTaGAAAGGGACCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LKQVTSQVQAIVQILIEGLPSSI*KGTSEW
Trigger: CCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAA...GCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTAGGCTCCAGGGGTTGTaGCTGATCTTCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPRLQGL*LIFSEL
Trigger: GAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCT...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGCTCCAGGGGTTGTaGCTGATCTTCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACRLQGL*LIFSEL
Trigger: GAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCT...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACAGGGGTACTTGAAGTaGTGCACCACGTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAQGYLK*CTTFSS
Trigger: GCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCAAGTTCAGAACAATaGTCCCTGCCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAASSEQ*SLPAVE
Trigger: CTCCACTGCAGGCAGGGACCATTGTTCTGAACTTGC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTCCCTCTGCCATAAGTTaGCCTCAGCCCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPPSAIS*PQPSFI
Trigger: AATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGG...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCCCACTTCAGTGGGGTaGGAGGGAGTGGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPPTSVG*EGVAFL
Trigger: TAAGAAGGCCACTCCCTCCCACCCCACTGAAGTGGG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTCTCATTAGCAGAATGTaGGCACCTGCACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPLISRM*APAPRA
Trigger: GGCCCTGGGTGCAGGTGCCCACATTCTGCTAATGAG...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAAGCTCACCTCAGAAGTaGAAGTGTTCTGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPSSPQK*KCSAEE
Trigger: TTCCTCAGCAGAACACTTCCACTTCTGAGGTGAGCT...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGGCTGAAGCCACAGAATaGTACAGGAGAGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLAEATE*YRREDC
Trigger: ACAGTCTTCTCTCCTGTACCATTCTGTGGCTTCAGC...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGACCCACTTCCATGGTTTaGCAAACACACATTGCGTTG +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRPTSMV*QTHIAL
Trigger: CAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGG...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR TCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGATAGGCCACTAAGTTaGTGTAACCATCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQDRPLS*CNHHCP
Trigger: GGGACAGTGATGGTTACATCAACTTAGTGGCCTATC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACCATCCCGGAAGCCCTTaGATGTGCTGTGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHHPGSP*MCCVQS
Trigger: ACTTTGCACACAGCACATTCAAGGGCTTCCGGGATG...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGTGGCTGATGTGCTCTaGTCGCATTTCCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPVADVL*SHFRIC
Trigger: GCAGATGCGGAAATGCGAGCAGAGCACATCAGCCAC...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGTGGCTGATGTGCTCTaGTCGCATTTCCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPVADVL*SHFRIC
Trigger: GCAGATGCGGAAATGCGAGCAGAGCACATCAGCCAC...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTGCAAAGTCAATCATaGGGACATCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAVQSQS*GHPPWA
Trigger: AGCCCAAGGTGGATGTCCGCATGATTGACTTTGCAC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTTCCTCAAGCCCTCACTaGCCCACTCTAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPSSSPH*PTLRVE
Trigger: CTCAACCCTTAGAGTGGGGCAGTGAGGGCTTGAGGA...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGAGCCCTTAAGAGGCTaGATCTTTAAGGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHEPLRG*IFKDQE
Trigger: TTCCTGGTCCTTAAAGATGCAGCCTCTTAAGGGCTC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCTACATAGAAGGTCCTaGCCAGGTGAAAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACLHRRS*PGESQW
Trigger: CCATTGGCTTTCACCTGGCCAGGACCTTCTATGTAG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTAGAGGATGCAGCACATaGGCCACAAAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPRGCST*ATKGEL
Trigger: TAGCTCTCCTTTTGTGGCCCATGTGCTGCATCCTCT...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTAAAGGGACCTCTGAGTaGCTGTGCAGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPKGTSE*LCSSTF
Trigger: GAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTT...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTAAAGGGACCTCTGAGTaGCTGTGCAGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPKGTSE*LCSSTF
Trigger: GAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTT...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCATTGCCATCTAGCATCTaGAAAGGGACCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPALPSSI*KGTSEW
Trigger: CCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAA...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTTGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPCGSLQ*RAHGHS
Trigger: ACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCA...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTCAGAACAGGGCCTACTaGTTCTCGTCCCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPQNRAY*FSSRIC
Trigger: ACAGATGCGGGACGAGAACCAGTAGGCCCTGTTCTG...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCTTCCTAAGGCAGCCTaGACACACCAGTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPLPKAA*THQSEP
Trigger: TGGCTCTGACTGGTGTGTCCAGGCTGCCTTAGGAAG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTACTGCAAATACTGTCTaGGCCAGAGCCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPTANTV*ARATRG
Trigger: GCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGT...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTACTCATTAGCAGAATGTaGGCACCTGCACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALLISRM*APAPRA
Trigger: GGCCCTGGGTGCAGGTGCCCACATTCTGCTAATGAG...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGAGCTCACCTCAGAAGTaGAAGTGTTCTGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQSSPQK*KCSAEE
Trigger: TTCCTCAGCAGAACACTTCCACTTCTGAGGTGAGCT...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTTGTGGAGGAAGGGCATaGGGCAAAAGCTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPCGGRA*GKSSPQ
Trigger: CTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACA...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCCACAGAAATGGTGCTaGGTCAACAGGGAAACACCA +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACPQKWC*VNRETP
Trigger: TGGTGTTTCCCTGTTGACCCAGCACCATTTCTGTGG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCAAGTTGCTACACTaGTCCCCTTCCTCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: TPTHSTRTANTVWARATRGKLLH*SPSSFK
Trigger: CTTAAAAGAGGAAGGGGACCAGTGTAGCAACTTGCC...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGGCAAGTTGCTACACTaGTCCCCTTCCTCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHGKLLH*SPSSFK
Trigger: CTTAAAAGAGGAAGGGGACCAGTGTAGCAACTTGCC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
3UTR CAA 72 bp CAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTaGCCTAAAGTGACAATGAACAGTGTGGCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: QLAGLPLKPNRH*PKVTMNSVALG
Trigger: GCCTAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGATAGGCCACTAAGTTaGTGTAACCATCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPADRPLS*CNHHCP
Trigger: GGGACAGTGATGGTTACATCAACTTAGTGGCCTATC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTACTCTTTGCCTCCTGTaGGCTCTCAGAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPTLCLL*ALRGLK
Trigger: CTTGAGACCTCTGAGAGCTCACAGGAGGCAAAGAGT...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGAACTCAAGCCACTGTTaGCATCTAGCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQNSSHC*HLASGK
Trigger: CTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTT...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAACCAGCGTGGCTGATGTaGTCTGCTCGCATTTCCGCA +
Preference number: 4 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKPAWLM*SARISA
Trigger: TGCGGAAATGCGAGCAGAGCACATCAGCCACGCTGG...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp GCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGATTGATAGAGGGCATTaGGGAAGCCTTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: AQTGHVAGPGHCADIDRGIDRGH*GSLQWR
Trigger: TCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAAT...CCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR GCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCGAGCCCTTAAGAGGCTaGATCTTTAAGGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARAEPLRG*IFKDQE
Trigger: TTCCTGGTCCTTAAAGATGCAGCCTCTTAAGGGCTC...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAACAAAGAATGGGAACCTaGCCACCAGTGGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKQRMGT*PPVAPG
Trigger: CCCTGGTGCCACTGGTGGGCAGGTTCCCATTCTTTG...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCCCATGATCCCATGTTaGACTTTGTTCCCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACPMIPC*TLFPSW
Trigger: CCAACTTGGGAACAAAGTGCAACATGGGATCATGGG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGGTCAGACCGAAGGATaGGTCCAGCTTTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALGQTEG*VQLCAV
Trigger: GACTGCACAAAGCTGGACCCATCCTTCGGTCTGACC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGCTCACCTCAGAAGTaGAAGTGTTCTGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACSSPQK*KCSAEE
Trigger: TTCCTCAGCAGAACACTTCCACTTCTGAGGTGAGCT...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCGGCAAGTTGCTACACTaGTCCCCTTCCTCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: KKTPTHSTRTANTVWARAGKLLH*SPSSFK
Trigger: CTTAAAAGAGGAAGGGGACCAGTGTAGCAACTTGCC...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGACCTCTGAGTGGCTGTaGAGCTCCACCTTCGGACTC +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMTSEWL*SSTFGL
Trigger: GAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGT...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACACGCCATGCTGCCGCGTaGCCATCTTCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTRHAAA*PSSGPT
Trigger: TGTTGGACCTGAAGATGGGCACGCGGCAGCATGGCG...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAGTGGCTGATGTGCTCTaGTCGCATTTCCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKVADVL*SHFRIC
Trigger: GCAGATGCGGAAATGCGAGCAGAGCACATCAGCCAC...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAATTGATAGAGGGCATTaGGGAAGCCTTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: KASLCVLTASSEQWSLPAIDRGH*GSLQWR
Trigger: TCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAAT...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGCAAAGAATGGGAACCTaGCCACCAGTGGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMQRMGT*PPVAPG
Trigger: CCCTGGTGCCACTGGTGGGCAGGTTCCCATTCTTTG...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCTGAATGTAAGTGGGTaGAGCTTTGCTCGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPLNVSG*SFARCE
Trigger: CTCACAGCGAGCAAAGCTGCACCCACTTACATTCAG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGCCCACTTCAGTGGGGTaGGAGGGAGTGGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMPTSVG*EGVAFL
Trigger: TAAGAAGGCCACTCCCTCCCACCCCACTGAAGTGGG...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAATCGGTGTCACCTCCTaGCCATCTGTTAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALIGVTS*PSVRSS
Trigger: GCTGCTTCTAACAGATGGCCAGGAGGTGACACCGAT...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACACCCAGCCCCAAAGAATaGGAACCTGCCCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTPSPKE*EPAHQW
Trigger: CCACTGGTGGGCAGGTTCCCATTCTTTGGGGCTGGG...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCCCACTTCCATGGTTTaGCAAACACACATTGCGTTG +
Preference number: 4 (lower is better)
Translates to: LKASLCVLTASSEQWSLPPTSMV*QTHIAL
Trigger: CAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTACTACATAGAAGGTCCTaGCCAGGTGAAAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALLHRRS*PGESQW
Trigger: CCATTGGCTTTCACCTGGCCAGGACCTTCTATGTAG...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAAGAGGATGCAGCACATaGGCCACAAAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALRGCST*ATKGEL
Trigger: TAGCTCTCCTTTTGTGGCCCATGTGCTGCATCCTCT...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CCA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAACTAGGCCCACAGAAATaGTGCTGGGTCAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKLGPQK*CWVNRE
Trigger: TTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAG...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGAGGAGAGCATCAGGGTaGCACCGGACACACTTTAGC +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMRRASG*HRTHFS
Trigger: GCTAAAGTGTGTCCGGTGCCACCCTGATGCTCTCCT...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACAGGCTCGCGGGGGCTTTaGCTTGCTTCGTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTGSRGL*LASSSL
Trigger: AAGACTAGACGAAGCAAGCCAAAGCCCCCGCGAGCC...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR GCA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTAACTCAAGCCACTGTTaGCATCTAGCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPNSSHC*HLASGK
Trigger: CTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTT...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGGGGTACTTGAAGTGGTaGACCACGTTCTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMGYLKW*TTFSSR
Trigger: CCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCC...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACAAAAGGGACCTCTGAGTaGCTGTGCAGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTKGTSE*LCSSTF
Trigger: GAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTT...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACAGGCCCACAGAAATGGTaGTGGGTCAACAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTGPQKW*WVNRET
Trigger: TGTTTCCCTGTTGACCCAGCACCATTTCTGTGGGCC...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGCTGAATGTAAGTGGGTaGAGCTTTGCTCGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMLNVSG*SFARCE
Trigger: CTCACAGCGAGCAAAGCTGCACCCACTTACATTCAG...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGTTGCCATCTAGCATCTaGAAAGGGACCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMLPSSI*KGTSEW
Trigger: CCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAA...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACAAGGCTCCAGGGGTTGTaGCTGATCTTCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTRLQGL*LIFSEL
Trigger: GAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCT...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACACAGGGGTACTTGAAGTaGTGCACCACGTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTQGYLK*CTTFSS
Trigger: GCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTG...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACACTAGGCCCACAGAAATaGTGCTGGGTCAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTLGPQK*CWVNRE
Trigger: TTCCCTGTTGACCCAGCACCATTTCTGTGGGCCTAG...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAAATACTGAATGTAAGTaGGTGCAGCTTTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALNTECK*VQLCSL
Trigger: CAGCGAGCAAAGCTGCACCCACTTACATTCAGTATT...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR TCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGCTTTGTATTCAGGGGTaGACTCCTTCATTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMLCIQG*TPSFRE
Trigger: CTCCCGAAATGAAGGAGTTCACCCCTGAATACAAAG...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR GCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGAGAGGGCGTGTGGTCTaGCCTCCTTCACTTTATATA +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMRGRVV*PPSLYI
Trigger: TATATAAAGTGAAGGAGGGCAGACCACACGCCCTCT...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGAACTCAAGCCACTGTTaGCATCTAGCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMNSSHC*HLASGK
Trigger: CTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTT...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR GCA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACAATTGATAGAGGGCATTaGGGAAGCCTTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTIDRGH*GSLQWR
Trigger: TCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAAT...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CCA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAAAAACTCAGCCATTATaGACATTTAACCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALKTQPL*TFNQVL
Trigger: AAGAACCTGGTTAAATGTCCATAATGGCTGAGTTTT...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS TCA 90 bp GGCCTCCAGGTTTCGGCCCGCCCCCTGGCAGGCAGCACAGGTGGCTaGGCACCGCTACAGCGGCCTCTCACCGGCCGCTTGGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLQVSARPLAGSTGG*APLQRPLTGRLVQL
Trigger: GAGCTGGACCAAGCGGCCGGTGAGAGGCCGCTGTAGCGGTGCTCAGCCACCTGTGCTGCCTGCCAGGGGGCGGGCCGAAACCTGGAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
CDS-3UTR CAA 90 bp ACCTCAGGGAGCACCATGTCCAGGTGCTTGAGACGCATCTCAGACCGGCGGTCCCCTCTCACCGGCCGCTaGGTCCAGCTCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: TSGSTMSRCLRRISDRRSPLTGR*VQLPAL
Trigger: CAGCGCCGGGAGCTGGACCAAGCGGCCGGTGAGAGG...GGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS GCA 90 bp TCCGAACGGGTCTCAGGAAGCAGCAGCCAGGCAGAGGGTCCCCCTTaGCATAATCATAGGGCCGTGACACCGGCCTGCCTGGCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: SERVSGSSSQAEGPP*HNHRAVTPACLARG
Trigger: CCCGCGAGCCAGGCAGGCCGGTGTCACGGCCCTATGATTATGGCAAGGGGGACCCTCTGCCTGGCTGCTGCTTCCTGAGACCCGTTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS CCA 90 bp GCACAGGTGGCTGAGCACCGCTACAGCGGCCTCTCACCGGCCGCTTaGTCCAGCTCCCGGCGCTGCCCACTGGGTACGGATCAACAACAA +
Preference number: 5 (lower is better)
Translates to: AQVAEHRYSGLSPAA*SSSRRCPLGTDQQQ
Trigger: TTGTTGTTGATCCGTACCCAGTGGGCAGCGCCGGGAGCTGGACCAAGCGGCCGGTGAGAGGCCGCTGTAGCGGTGCTCAGCCACCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
CDS-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCTCCGGCGGGAGTGTTaGCGCCGAGGTTGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: GCSFARCEEQQNAAASPPLRREC*RRGCSR
Trigger: ACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AGCGGGCTCGGACCGAGCACCCCCTCCCCCGCACGCAAGGTCCAAAGCAAACGCGGGGCTGGTGTCAGCTaGGCCCAGGGAAGCACTATA +
Preference number: 5 (lower is better)
Translates to: SGLGPSTPSPARKVQSKRGAGVS*AQGSTI
Trigger: TATAGTGCTTCCCTGGGCCAAGCTGACACCAGCCCC...GCGTTTGCTTTGGACCTTGCGTGCGGGGGAGGGGGTGCTCGGTCCGAGCCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGGTGTTTGCGCCGAGGTaGCTCCCGTTCTGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: DTSGAGSARCTERSGLGPVFAPR*LPFCCV
Trigger: GACACAACAGAACGGGAGCAACCTCGGCGCAAACAC...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCGGGGTCCCTGGCAAGTaGCTACACTGGTCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GCSFARCEEQQNAAASPPGVPGK*LHWSPS
Trigger: GGAAGGGGACCAGTGTAGCAACTTGCCAGGGACCCC...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCAGGTGCCAGGCCCCTaGATGGGAATCCCCATGCTC +
Preference number: 5 (lower is better)
Translates to: GCSFARCEEQQNAAASPPQVPGP*MGIPML
Trigger: GAGCATGGGGATTCCCATCAAGGGGCCTGGCACCTG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS GCA 90 bp GGTCACTGCCACTGCCTGACCGGTGCAGGCTCCGGCGGGAGTGTTTaGGCCGAGGTTGCTCCCGTTCTGTTGTGTCATCCTGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: GHCHCLTGAGSGGSV*AEVAPVLLCHPVPQ
Trigger: CTGTGGAACAGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGCCTCTCACCGGCCGCTaGGTCCAGCTCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQPLTGR*VQLPAL
Trigger: CAGCGCCGGGAGCTGGACCAAGCGGCCGGTGAGAGG...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR CAA 90 bp GACACAAGCGGGGCGGGCAGCGCTAGGTGTACAGAAAGGAGCGGGCTCGGACCGCACAGCTGCCGAAACTaGAGGAAGAAGACTCCCACC +
Preference number: 5 (lower is better)
Translates to: DTSGAGSARCTERSGLGPHSCRN*RKKTPT
Trigger: GGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGTG...CGGTCCGAGCCCGCTCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAGGGGCTGGTGTCAGCTaGGCCCAGGGAAGCACTATA +
Preference number: 5 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTGAGVS*AQGSTI
Trigger: TATAGTGCTTCCCTGGGCCAAGCTGACACCAGCCCC...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS GCA 90 bp GCAGAGGGTCCCCCTTGCCATAATCATAGGGCCGTGACACCGGCCTaGCTGGCTCGCGGGGGCTTTGGCTTGCTTCGTCTAGTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: AEGPPCHNHRAVTPA*LARGGFGLLRLVLA
Trigger: TGCTAAGACTAGACGAAGCAAGCCAAAGCCCCCGCGAGCCAGGCAGGCCGGTGTCACGGCCCTATGATTATGGCAAGGGGGACCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS CCA 90 bp TTAGCGCTCCGGATCAGCGGAGTCCAGAGCTTCGGTCAGAGAAGCTaGTTTCCCGCTACTAGCCGGCCAACCCTCAGGCACTGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: LALRISGVQSFGQRS*FPATSRPTLRHWRS
Trigger: AGAGCGCCAGTGCCTGAGGGTTGGCCGGCTAGTAGCGGGAAACCAGCTTCTCTGACCGAAGCTCTGGACTCCGCTGATCCGGAGCGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCGGTCTCCAGCCCGACTaGCATTCTTGCCATACTGCC +
Preference number: 5 (lower is better)
Translates to: GCSFARCEEQQNAAASPPGLQPD*HSCHTA
Trigger: GGCAGTATGGCAAGAATGCAAGTCGGGCTGGAGACC...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp GGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCGGTCTCCAGCCCGACTaGCATTCTTGCCATACTGCC +
Preference number: 5 (lower is better)
Translates to: GLPLQHSFQAPQFAQDRLGLQPD*HSCHTA
Trigger: GGCAGTATGGCAAGAATGCAAGTCGGGCTGGAGACC...GAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCGTGTTTGCGCCGAGGTaGCTCCCGTTCTGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: GCSFARCEEQQNAAASPPVFAPR*LPFCCV
Trigger: GACACAACAGAACGGGAGCAACCTCGGCGCAAACAC...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACAAGGATGGGTCCAGCTTaGTGCAGTCAGCCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTRMGPA*CSQPCG
Trigger: ACCACAGGGCTGACTGCACAAAGCTGGACCCATCCT...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCCTTAGGCAAGGGAACTaGGTGAGAGAGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSALRQGN*VREAVS
Trigger: TGAAACAGCCTCTCTCACCAAGTTCCCTTGCCTAAG...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCGCTGCTGCCTTGAACTaGGCCTGGGGAAATGAGACC +
Preference number: 5 (lower is better)
Translates to: GCSFARCEEQQNAAASPPAAALN*AWGNET
Trigger: GGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGC...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS GCA 90 bp CTGCCTGACCGGTGCAGGCTCCGGCGGGAGTGTTTGCGCCGAGGTTaGTCCCGTTCTGTTGTGTCATCCTGTTCCACAGTCTCACTTTCC +
Preference number: 5 (lower is better)
Translates to: LPDRCRLRRECLRRG*SRSVVSSCSTVSLS
Trigger: GGAAAGTGAGACTGTGGAACAGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCGGTCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCCTCTCACCGGCCGCTaGGTCCAGCTCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: KKTPTHSTRTANTVWARAPLTGR*VQLPAL
Trigger: CAGCGCCGGGAGCTGGACCAAGCGGCCGGTGAGAGG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000395238.5
CDS-3UTR CAA 90 bp TACACCCCAGGGGAAGGATCCCAAGGGACGGGCTGGCAGCCGGACACATGGACACAAACACACATTGCGTaGGGGGCCAGTTGCACACTG +
Preference number: 5 (lower is better)
Translates to: YTPGEGSQGTGWQPDTWTQTHIA*GASCTL
Trigger: CAGTGTGCAACTGGCCCCCAACGCAATGTGTGTTTG...TGTCCATGTGTCCGGCTGCCAGCCCGTCCCTTGGGATCCTTCCCCTGGGGTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGCTCCGGCGGGAGTGTTaGCGCCGAGGTTGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQLRREC*RRGCSR
Trigger: ACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAG...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCAACCTGTCACGTGCCAACAGGTGCCTGGGGAACCCAGGCGCCGCCCTCTGCCGAACTCAAGCCACTGTaGCCATCTAGCATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PTCHVPTGAWGTQAPPSAELKPL*PSSIWK
Trigger: TTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTC...GGCAGAGGGCGGCGCCTGGGTTCCCCAGGCACCTGTTGGCACGTGACAGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGAACACGCAGGGGTACTaGAAGTGGTGCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: EGPCTSPGLYLTISRALQNTQGY*KWCTTF
Trigger: GAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTT...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GGGTGCAGCTTTGCTCGCTGTGAGGAGCAGCAGAATGCGGCAGCCTCTCCTCCCCACTTTGTTCCCAAGTaGGGGCTAAGAAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GCSFARCEEQQNAAASPPHFVPK*GLRRLG
Trigger: GCCCAGCCTTCTTAGCCCCAACTTGGGAACAAAGTG...GGGAGGAGAGGCTGCCGCATTCTGCTGCTCCTCACAGCGAGCAAAGCTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCGGGGTCCCTGGCAAGTaGCTACACTGGTCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SGGGDRLSFQERAAESDSGVPGK*LHWSPS
Trigger: GGAAGGGGACCAGTGTAGCAACTTGCCAGGGACCCC...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCCAGGTGCCAGGCCCCTaGATGGGAATCCCCATGCTC +
Preference number: 5 (lower is better)
Translates to: QPCGALRAPIKELADTHSQVPGP*MGIPML
Trigger: GAGCATGGGGATTCCCATCAAGGGGCCTGGCACCTG...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTACCACGCCGGCCGCTaGGTCCAGCTCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACYHAGR*VQLPAL
Trigger: CAGCGCCGGGAGCTGGACCAAGCGGCCGGCGTGGTA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460540.1
CDS TCA 90 bp GATCGTCGTAACGCATCATGCTGCTGTGTCCGCCTACTTGGTGGATaGAGGGCTCCAGGAGGACTCCCCGGTCTCCAGCCCGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: DRRNASCCCVRLLGG*RAPGGLPGLQPDLH
Trigger: ATGCAAGTCGGGCTGGAGACCGGGGAGTCCTCCTGGAGCCCTTCATCCACCAAGTAGGCGGACACAGCAGCATGATGCGTTACGACGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS GCA 90 bp GCAGGAGGAACTTGTAGAGCTTTCGGTCCTTGGACTCGGAGCGCATaGGGCTCAGCTGCTGCTTGTGACAACGCAGGCTCCAGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: AGGTCRAFGPWTRSA*GSAAACDNAGSRGC
Trigger: ACAACCCCTGGAGCCTGCGTTGTCACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCTACAAGTTCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS GCA 90 bp CGCGTGCCCATCTTCAGGTCCAACACGCAGGGGTACTTGAAGTGGTaGACCACGTTCTCAAGCAGGAGGAACTCTGGGCCACGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RVPIFRSNTQGYLKW*TTFSSRRNSGPRSR
Trigger: CCTTGACCGTGGCCCAGAGTTCCTCCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTTGGACCTGAAGATGGGCACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495798.1
CDS-3UTR CAA 90 bp GTCTGGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGTGCGCAGGCTCCAGGGGTaGTGGCTGATCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: VWPIMHGGVIPEALECAVRRLQG*WLIFSE
Trigger: TTCTGAGAAGATCAGCCACAACCCCTGGAGCCTGCG...CACAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp CTCAGGGAGCACCATGTCCAGGTGCTTGAGACGCATCTCAGACCGGCGGTCCAGAACACGCAGGGGTACTaGAAGTGGTGCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: LREHHVQVLETHLRPAVQNTQGY*KWCTTF
Trigger: GAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTT...CTGGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp GGTAAGAGGCCTGCCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATTCAGGCCCCGCAGTTaGCTCAGGATAGGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GKRPAAPAQLSGPAVCSGFRPRS*LRIGSN
Trigger: GTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAA...TCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGGCAGGCCTCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAACCATGTCCAGGTGCTaGAGACGCATCTCAGACCGG +
Preference number: 5 (lower is better)
Translates to: LQILSGPEPPEALRPARTTMSRC*RRISDR
Trigger: CCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGT...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCCGCGGGGGCTTTGGCTaGCTTCGTCTAGTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPRGGFG*LRLVLA
Trigger: TGCTAAGACTAGACGAAGCAAGCCAAAGCCCCCGCG...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613416.4
CDS-3UTR CAA 90 bp CTGTCTGGCCCATCATGCACGGTGGGGTCATCCCGGAAGCCCTTGAATGTGCTGCAAACACACATTGCGTaGGGGGCCAGTTGCACACTG +
Preference number: 5 (lower is better)
Translates to: LSGPSCTVGSSRKPLNVLQTHIA*GASCTL
Trigger: CAGTGTGCAACTGGCCCCCAACGCAATGTGTGTTTG...CAGCACATTCAAGGGCTTCCGGGATGACCCCACCGTGCATGATGGGCCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp CCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGCTGTGTCCGCCTACTaGGTGGATGAAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PQFAQDRLKQVTSQVQAIAVSAY*VDEGLQ
Trigger: CTGGAGCCCTTCATCCACCAAGTAGGCGGACACAGC...AATGGCCTGGACCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp TGGTGTCAGCTTGGCCCAGGGAAGCACTATAGAGAGGGCTCACCTGAGCACCCCCACAGCTGCCGAAACTaGAGGAAGAAGACTCCCACC +
Preference number: 5 (lower is better)
Translates to: WCQLGPGKHYREGSPEHPHSCRN*RKKTPT
Trigger: GGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGTG...GGGGTGCTCAGGTGAGCCCTCTCTATAGTGCTTCCCTGGGCCAAGCTGACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTCCTTCCCAGGGGTCCCTGGCAAGTaGCTACACTGGTCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: QNARAYSSPRSKRTRSFPGVPGK*LHWSPS
Trigger: GGAAGGGGACCAGTGTAGCAACTTGCCAGGGACCCC...TGGGAAGGACCTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS TCA 90 bp CCACGTTCTCAAGCAGGAGGAACTCTGGGCCACGGTCAAGGAGAATaGCAACCACACTCACCATCAGCCCCAGCCAGGAAAGCACAACCC +
Preference number: 5 (lower is better)
Translates to: PRSQAGGTLGHGQGE*QPHSPSAPARKAQP
Trigger: GGGTTGTGCTTTCCTGGCTGGGGCTGATGGTGAGTGTGGTTGTCATTCTCCTTGACCGTGGCCCAGAGTTCCTCCTGCTTGAGAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495798.1
CDS GCA 90 bp TGCGGAAGCCTTCAATGGAGAGCCCACGGCCATAGTACTTGTTCCTaGAGAGGTAATGCCCTGTGTCCAGCTGGTACACCTGCATGCCGC +
Preference number: 5 (lower is better)
Translates to: CGSLQWRAHGHSTCS*RGNALCPAGTPACR
Trigger: GCGGCATGCAGGTGTACCAGCTGGACACAGGGCATTACCTCTGCAGGAACAAGTACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000495798.1
ENST00000613416.4
CDS CCA 90 bp TGCGTTGGGGGCCAGTTGCACACTGAGGGCAGAGGATGCAGCACATaGGCCACAAAAGGAGAGCTACATAGAAGGTCCTGGCCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: CVGGQLHTEGRGCST*ATKGELHRRSWPGE
Trigger: TTCACCTGGCCAGGACCTTCTATGTAGCTCTCCTTTTGTGGCCCATGTGCTGCATCCTCTGCCCTCAGTGTGCAACTGGCCCCCAACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000498149.1
ENST00000613416.4
CDS-3UTR CAA 90 bp GAGGGGCCCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGGAACTCAAGCCACTGTaGCCATCTAGCATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: EGPCTSPGLYLTISRALQELKPL*PSSIWK
Trigger: TTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTC...CTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TCGGGCGGTGGAGACAGGCTTAGCTTCCAGGAAAGAGCAGCAGAGAGCGATTCCAACACGCAGGGGTACTaGAAGTGGTGCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: SGGGDRLSFQERAAESDSNTQGY*KWCTTF
Trigger: GAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTT...GGAATCGCTCTCTGCTGCTCTTTCCTGGAAGCTAAGCCTGTCTCCACCGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGACCATGTCCAGGTGCTaGAGACGCATCTCAGACCGG +
Preference number: 5 (lower is better)
Translates to: QHSFQAPQFAQDRLKQVTTMSRC*RRISDR
Trigger: CCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGT...CGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS GCA 90 bp AGGGCTCCAGGAGGACTCCCCGGTCTCCAGCCCGACTTGCATTCTTaGCATACTGCCCCACTTCCATGGTTTGACAAACACACATTGCGT +
Preference number: 5 (lower is better)
Translates to: RAPGGLPGLQPDLHS*HTAPLPWFDKHTLR
Trigger: ACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGGCTGGAGACCGGGGAGTCCTCCTGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS GCA 90 bp GTGGATGAAGGGCTCCAGGAGGACTCCCCGGTCTCCAGCCCGACTTaGATTCTTGCCATACTGCCCCACTTCCATGGTTTGACAAACACA +
Preference number: 5 (lower is better)
Translates to: VDEGLQEDSPVSSPT*ILAILPHFHGLTNT
Trigger: TGTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGGCTGGAGACCGGGGAGTCCTCCTGGAGCCCTTCATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS GCA 90 bp CCACTGTTGCCATCTAGCATCTGGAAAGGGACCTCTGAGTGGCTGTaGAGCTCCACCTTCGGACTCTTTGCCTCCTGTGAGCTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PLLPSSIWKGTSEWL*SSTFGLFASCELSE
Trigger: CTCTGAGAGCTCACAGGAGGCAAAGAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS CCA 90 bp CTCAAGCCACTGTTGCCATCTAGCATCTGGAAAGGGACCTCTGAGTaGCTGTGCAGCTCCACCTTCGGACTCTTTGCCTCCTGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LKPLLPSSIWKGTSE*LCSSTFGLFASCEL
Trigger: GAGCTCACAGGAGGCAAAGAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAACAGTGGCTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS CCA 90 bp TATTTCTCAGCCAGGAGCAACATAACTCCCAGGAGAGCATCAGGGTaGCACCGGACACACTTTAGCGCTCCGGATCAGCGGAGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: YFSARSNITPRRASG*HRTHFSAPDQRSPE
Trigger: CTCTGGACTCCGCTGATCCGGAGCGCTAAAGTGTGTCCGGTGCCACCCTGATGCTCTCCTGGGAGTTATGTTGCTCCTGGCTGAGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS CCA 90 bp GGGGTACTTGAAGTGGTGCACCACGTTCTCAAGCAGGAGGAACTCTaGGCCACGGTCAAGGAGAATGACAACCACACTCACCATCAGCCC +
Preference number: 5 (lower is better)
Translates to: GVLEVVHHVLKQEEL*ATVKENDNHTHHQP
Trigger: GGGCTGATGGTGAGTGTGGTTGTCATTCTCCTTGACCGTGGCCCAGAGTTCCTCCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495798.1
CDS-3UTR CAA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACGCTGTGTCCGCCTACTaGGTGGATGAAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHAVSAY*VDEGLQ
Trigger: CTGGAGCCCTTCATCCACCAAGTAGGCGGACACAGC...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAACAGATACCACGCCTTaGTATTCAGGGGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: LQILSGPEPPEALRPARTTDTTP*YSGVNS
Trigger: GGAGTTCACCCCTGAATACAAAGGCGTGGTATCTGT...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCTCCGGCGGGAGTGTTaGCGCCGAGGTTGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: LKASLCVLTASSEQWSLPLRREC*RRGCSR
Trigger: ACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTCTCCGGCGGGAGTGTTaGCGCCGAGGTTGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPLRREC*RRGCSR
Trigger: ACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAG...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGCCACCTTCGGACTCTTaGCCTCCTGTGAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQPPSDS*PPVSSQ
Trigger: CTGAGAGCTCACAGGAGGCAAAGAGTCCGAAGGTGG...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp ACCTCAGGGAGCACCATGTCCAGGTGCTTGAGACGCATCTCAGACCGGCGGTCCGAACTCAAGCCACTGTaGCCATCTAGCATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: TSGSTMSRCLRRISDRRSELKPL*PSSIWK
Trigger: TTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTC...GGACCGCCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGTGCTCCCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTACCATGTCCAGGTGCTaGAGACGCATCTCAGACCGG +
Preference number: 5 (lower is better)
Translates to: THSTRTANTVWARATRGPTMSRC*RRISDR
Trigger: CCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGT...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCGCTCCAGCACAGCTTTCAGGCCCCGCAGTTTGCTCAGGATAGGCTCAAACAGTCATCCCGGAAGCCCTaGAATGTGCTGTGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: PLQHSFQAPQFAQDRLKQSSRKP*NVLCAK
Trigger: CTTTGCACACAGCACATTCAAGGGCTTCCGGGATGA...CTGTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAAAGCTGTGCTGGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGCCCTCTGCCATAAGTaGGCCTCAGCCCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: THSTRTANTVWARATRGPALCHK*ASAQLH
Trigger: ATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGGC...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGCTGCTGCCTTGAACTaGGCCTGGGGAAATGAGACC +
Preference number: 5 (lower is better)
Translates to: THSTRTANTVWARATRGPAAALN*AWGNET
Trigger: GGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGC...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCAGGTGCCAGGCCCCTaGATGGGAATCCCCATGCTC +
Preference number: 5 (lower is better)
Translates to: KKTPTHSTRTANTVWARAQVPGP*MGIPML
Trigger: GAGCATGGGGATTCCCATCAAGGGGCCTGGCACCTG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS TCA 90 bp CCAGCCCGACTTGCATTCTTGCCATACTGCCCCACTTCCATGGTTTaGCAAACACACATTGCGTTGGGGGCCAGTTGCACACTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PARLAFLPYCPTSMV*QTHIALGASCTLRA
Trigger: TGCCCTCAGTGTGCAACTGGCCCCCAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS TCA 90 bp GGCTCAGCTGCTGCTTGTGACAACGCAGGCTCCAGGGGTTGTGGCTaGTCTTCTCAGAACTCAAGCCACTGTTGCCATCTAGCATCTGGA +
Preference number: 5 (lower is better)
Translates to: GSAAACDNAGSRGCG*SSQNSSHCCHLASG
Trigger: TCCAGATGCTAGATGGCAACAGTGGCTTGAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCTGCGTTGTCACAAGCAGCAGCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAGGTCTCCAGCCCGACTaGCATTCTTGCCATACTGCC +
Preference number: 5 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQGLQPD*HSCHTA
Trigger: GGCAGTATGGCAAGAATGCAAGTCGGGCTGGAGACC...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTCGCAGGCTCCAGGGGTaGTGGCTGATCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCRRLQG*WLIFSE
Trigger: TTCTGAGAAGATCAGCCACAACCCCTGGAGCCTGCG...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGCGCAGGCTCCAGGGGTaGTGGCTGATCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: ARELGERGCFRNRTGANLRRLQG*WLIFSE
Trigger: TTCTGAGAAGATCAGCCACAACCCCTGGAGCCTGCG...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCTGCACCAGCCCAGGGCTTTACCTTACAATCAGCAGGGCCCTGCAGCCACAGAGCCATTGTGCAGATATaGATAGAGGGCATTGCGGAA +
Preference number: 5 (lower is better)
Translates to: PAPAQGFTLQSAGPCSHRAIVQI*IEGIAE
Trigger: TTCCGCAATGCCCTCTATCAATATCTGCACAATGGC...TCTGTGGCTGCAGGGCCCTGCTGATTGTAAGGTAAAGCCCTGGGCTGGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTGCCCTCTGCCATAAGTaGGCCTCAGCCCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCALCHK*ASAQLH
Trigger: ATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGGC...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp ACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGCTGCTGCCTTGAACTaGGCCTGGGGAAATGAGACC +
Preference number: 5 (lower is better)
Translates to: TPTHSTRTANTVWARATRAAALN*AWGNET
Trigger: GGTCTCATTTCCCCAGGCCAAGTTCAAGGCAGCAGC...TCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCCACTTTGTTCCCAAGTaGGGGCTAAGAAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSHFVPK*GLRRLG
Trigger: GCCCAGCCTTCTTAGCCCCAACTTGGGAACAAAGTG...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTGGGGCTGGTGTCAGCTaGGCCCAGGGAAGCACTATA +
Preference number: 5 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPGAGVS*AQGSTI
Trigger: TATAGTGCTTCCCTGGGCCAAGCTGACACCAGCCCC...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS GCA 90 bp CACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCATTaGGGAAGCCTTCAATGGAGAGCCCACGGCCATAGTACTTGTTCC +
Preference number: 5 (lower is better)
Translates to: HVAGPGHCADIDRGH*GSLQWRAHGHSTCS
Trigger: GGAACAAGTACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000495798.1
ENST00000613416.4
CDS CCA 90 bp GGCCATTGTGCAGATATTGATAGAGGGCATTGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGTACTTGTTCCTGCATGCCGCAGACC +
Preference number: 5 (lower is better)
Translates to: GHCADIDRGHCGSLQ*RAHGHSTCSCMPQT
Trigger: GGTCTGCGGCATGCAGGAACAAGTACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACGCTGTGTCCGCCTACTaGGTGGATGAAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHAVSAY*VDEGLQ
Trigger: CTGGAGCCCTTCATCCACCAAGTAGGCGGACACAGC...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGTTGCTCCCGTTCTGTaGTGTCATCCTGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: THSTRTANTVWARATRGPVAPVL*CHPVPQ
Trigger: CTGTGGAACAGGATGACACAACAGAACGGGAGCAAC...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GAGCGATTCCCAGAACGCGAGGGCTTACAGTTCCCCGAGAAGCAAAAGAACCAGGTTGCTCCCGTTCTGTaGTGTCATCCTGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: ERFPEREGLQFPEKQKNQVAPVL*CHPVPQ
Trigger: CTGTGGAACAGGATGACACAACAGAACGGGAGCAAC...CTGGTTCTTTTGCTTCTCGGGGAACTGTAAGCCCTCGCGTTCTGGGAATCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp ACGTCGCAGGTCCAGGCCATTGTGCAGATATTGATAGAGGGCATTGCGGAAGCCGTTGCTCCCGTTCTGTaGTGTCATCCTGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: TSQVQAIVQILIEGIAEAVAPVL*CHPVPQ
Trigger: CTGTGGAACAGGATGACACAACAGAACGGGAGCAAC...GGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGTGTTTGCGCCGAGGTaGCTCCCGTTCTGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACVFAPR*LPFCCV
Trigger: GACACAACAGAACGGGAGCAACCTCGGCGCAAACAC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTGTTTGCGCCGAGGTaGCTCCCGTTCTGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: KASLCVLTASSEQWSLPAVFAPR*LPFCCV
Trigger: GACACAACAGAACGGGAGCAACCTCGGCGCAAACAC...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCCACCTTCGGACTCTTaGCCTCCTGTGAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACPPSDS*PPVSSQ
Trigger: CTGAGAGCTCACAGGAGGCAAAGAGTCCGAAGGTGG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAGAAGACTCCCACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCCGCAGGCTCCAGGGGTaGTGGCTGATCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: KKTPTHSTRTANTVWARARRLQG*WLIFSE
Trigger: TTCTGAGAAGATCAGCCACAACCCCTGGAGCCTGCG...GGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGTGGGAGTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGAACACGCAGGGGTACTaGAAGTGGTGCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQNTQGY*KWCTTF
Trigger: GAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTT...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCGCCATTGTGCAGATATaGATAGAGGGCATTGCGGAA +
Preference number: 5 (lower is better)
Translates to: QPCGALRAPIKELADTHSAIVQI*IEGIAE
Trigger: TTCCGCAATGCCCTCTATCAATATCTGCACAATGGC...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGTTCAGGCCCCGCAGTTaGCTCAGGATAGGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ARELGERGCFRNRTGANLFRPRS*LRIGSN
Trigger: GTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAA...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACCATGTCCAGGTGCTaGAGACGCATCTCAGACCGG +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACTMSRC*RRISDR
Trigger: CCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGT...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GCAAGGGAACTTGGTGAGAGAGGCTGTTTCAGGAATAGGACAGGTGCCAACCTGCAAAGGGCTGCTGCCTaGAACTTGGCCTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: ARELGERGCFRNRTGANLQRAAA*NLAWGN
Trigger: ATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTG...CAGGTTGGCACCTGTCCTATTCCTGAAACAGCCTCTCTCACCAAGTTCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTGAGGCCTGCTAGGACAAAGCCAAACAGGCACTaGCCTAAAGTGACAATGAAC +
Preference number: 5 (lower is better)
Translates to: LQILSGPEPPEALRPARTKPNRH*PKVTMN
Trigger: GTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTT...TGTCCTAGCAGGCCTCAGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACCACTTTGTTCCCAAGTaGGGGCTAAGAAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHHFVPK*GLRRLG
Trigger: GCCCAGCCTTCTTAGCCCCAACTTGGGAACAAAGTG...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS GCA 90 bp ATTCTTGCCATACTGCCCCACTTCCATGGTTTGACAAACACACATTaGGTTGGGGGCCAGTTGCACACTGAGGGCAGAGGATGCAGCACA +
Preference number: 5 (lower is better)
Translates to: ILAILPHFHGLTNTH*VGGQLHTEGRGCST
Trigger: TGTGCTGCATCCTCTGCCCTCAGTGTGCAACTGGCCCCCAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS-3UTR CAA 90 bp CCGCAGTTTGCTCAGGATAGGCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTCCCCACTTCCATGGTTaGACAAACACACATTGCGTT +
Preference number: 5 (lower is better)
Translates to: PQFAQDRLKQVTSQVQAIPHFHG*TNTHCV
Trigger: AACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGG...AATGGCCTGGACCTGCGACGTGACCTGTTTGAGCCTATCCTGAGCAAACTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS-3UTR CAA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGTTGCTCCCGTTCTGTaGTGTCATCCTGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQVAPVL*CHPVPQ
Trigger: CTGTGGAACAGGATGACACAACAGAACGGGAGCAAC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAGTTGCTCCCGTTCTGTaGTGTCATCCTGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQVAPVL*CHPVPQ
Trigger: CTGTGGAACAGGATGACACAACAGAACGGGAGCAAC...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTTCAGGCCCCGCAGTTaGCTCAGGATAGGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACFRPRS*LRIGSN
Trigger: GTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACACCATGTCCAGGTGCTaGAGACGCATCTCAGACCGG +
Preference number: 5 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHTMSRC*RRISDR
Trigger: CCGGTCTGAGATGCGTCTCAAGCACCTGGACATGGT...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGTCATCCCGGAAGCCCTaGAATGTGCTGTGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQSSRKP*NVLCAK
Trigger: CTTTGCACACAGCACATTCAAGGGCTTCCGGGATGA...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCAAAGGGCTGCTGCCTaGAACTTGGCCTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACQRAAA*NLAWGN
Trigger: ATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAAGAGAGGGTGCTAACCTaGGCAATGGCTGAAATCGGT +
Preference number: 5 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQERVLT*AMAEIG
Trigger: ACCGATTTCAGCCATTGCCAAGGTTAGCACCCTCTC...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CAGCCCTGTGGTGCCCTGAGGGCACCTATTAAAGAGCTAGCTGACACCCACAGCCTAGCGGCTTTATTTTaGACATACACGACCTCAGAC +
Preference number: 5 (lower is better)
Translates to: QPCGALRAPIKELADTHSLAALF*TYTTSD
Trigger: GTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG...GCTGTGGGTGTCAGCTAGCTCTTTAATAGGTGCCCTCAGGGCACCACAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CTAGCGGCTTTATTTTTGACATACACGACCTCAGACACAAGCGGGGCGGGCAGCCCCCACTTCCATGGTTaGACAAACACACATTGCGTT +
Preference number: 5 (lower is better)
Translates to: LAALFLTYTTSDTSGAGSPHFHG*TNTHCV
Trigger: AACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGG...GCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGTGTTTGCGCCGAGGTaGCTCCCGTTCTGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: LKASLCVLTASSEQWSLPVFAPR*LPFCCV
Trigger: GACACAACAGAACGGGAGCAACCTCGGCGCAAACAC...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCGCAGGCTCCAGGGGTaGTGGCTGATCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LKASLCVLTASSEQWSLPRRLQG*WLIFSE
Trigger: TTCTGAGAAGATCAGCCACAACCCCTGGAGCCTGCG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCTCATCCCGGAAGCCCTaGAATGTGCTGTGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACSSRKP*NVLCAK
Trigger: CTTTGCACACAGCACATTCAAGGGCTTCCGGGATGA...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TCCTGGCCATCTGTTAGAAGCAGCAGATCTGTGCCATTAAGGGCTGGCAGCCAACTTAGGCAAGGGAACTaGGTGAGAGAGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SWPSVRSSRSVPLRAGSQLRQGN*VREAVS
Trigger: TGAAACAGCCTCTCTCACCAAGTTCCCTTGCCTAAG...TTGGCTGCCAGCCCTTAATGGCACAGATCTGCTGCTTCTAACAGATGGCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp ACCCATAGCACAAGAACTGCAAATACTGTCTGGGCCAGAGCCACCAGAGGCCCTACCCATGATCCCATGTaGCACTTTGTTCCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: THSTRTANTVWARATRGPTHDPM*HFVPKL
Trigger: CAACTTGGGAACAAAGTGCAACATGGGATCATGGGT...AGGGCCTCTGGTGGCTCTGGCCCAGACAGTATTTGCAGTTCTTGTGCTATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACAGATACCACGCCTTaGTATTCAGGGGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACTDTTP*YSGVNS
Trigger: GGAGTTCACCCCTGAATACAAAGGCGTGGTATCTGT...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCAGGAACTCAAGCCACTGTaGCCATCTAGCATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: KQVCVSSRQVQNNGPCLQELKPL*PSSIWK
Trigger: TTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTC...CTGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTTTCAGGCCCCGCAGTTaGCTCAGGATAGGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LKASLCVLTASSEQWSLPFRPRS*LRIGSN
Trigger: GTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAA...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCCTTAGGCAAGGGAACTaGGTGAGAGAGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACLRQGN*VREAVS
Trigger: TGAAACAGCCTCTCTCACCAAGTTCCCTTGCCTAAG...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTCACAGCTGCCGAAACTaGAGGAAGAAGACTCCCACC +
Preference number: 5 (lower is better)
Translates to: LKASLCVLTASSEQWSLPHSCRN*RKKTPT
Trigger: GGTGGGAGTCTTCTTCCTCAAGTTTCGGCAGCTGTG...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTCAAAGGGCTGCTGCCTaGAACTTGGCCTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPQRAAA*NLAWGN
Trigger: ATTTCCCCAGGCCAAGTTCAAGGCAGCAGCCCTTTG...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AGTTACCAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACGAGAGGGTGCTAACCTaGGCAATGGCTGAAATCGGT +
Preference number: 5 (lower is better)
Translates to: SYQGFSQLAGLPLKPNRHERVLT*AMAEIG
Trigger: ACCGATTTCAGCCATTGCCAAGGTTAGCACCCTCTC...GTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTGGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTTCTGAAGCCAAACAGGCACTaGCCTAAAGTGACAATGAAC +
Preference number: 5 (lower is better)
Translates to: PVEEGHGAKAHLRSGSVLKPNRH*PKVTMN
Trigger: GTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTT...CAGAACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AACACCTGTGGAGGAAGGGCATGGGGCAAAAGCTCACCTCAGAAGTGGAAGTGTACCCATGATCCCATGTaGCACTTTGTTCCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: NTCGGRAWGKSSPQKWKCTHDPM*HFVPKL
Trigger: CAACTTGGGAACAAAGTGCAACATGGGATCATGGGT...ACACTTCCACTTCTGAGGTGAGCTTTTGCCCCATGCCCTTCCTCCACAGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTCCCCACTTCCATGGTTaGACAAACACACATTGCGTT +
Preference number: 5 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPPHFHG*TNTHCV
Trigger: AACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGG...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321599.9
ENST00000613416.4
CDS-3UTR CAA 90 bp CAAGGCTTCTCACAGCTGGCAGGCTTACCTTTAAAGCCAAACAGGCACTTGCCTGCCATTGTGCAGATATaGATAGAGGGCATTGCGGAA +
Preference number: 5 (lower is better)
Translates to: QGFSQLAGLPLKPNRHLPAIVQI*IEGIAE
Trigger: TTCCGCAATGCCCTCTATCAATATCTGCACAATGGC...AGGCAAGTGCCTGTTTGGCTTTAAAGGTAAGCCTGCCAGCTGTGAGAAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCGCCATTGTGCAGATATaGATAGAGGGCATTGCGGAA +
Preference number: 5 (lower is better)
Translates to: KSKSVCPHGKFRTMVPACAIVQI*IEGIAE
Trigger: TTCCGCAATGCCCTCTATCAATATCTGCACAATGGC...GCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTTCATCCCGGAAGCCCTaGAATGTGCTGTGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPSSRKP*NVLCAK
Trigger: CTTTGCACACAGCACATTCAAGGGCTTCCGGGATGA...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTTCATCCCGGAAGCCCTaGAATGTGCTGTGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LKASLCVLTASSEQWSLPSSRKP*NVLCAK
Trigger: CTTTGCACACAGCACATTCAAGGGCTTCCGGGATGA...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CGTGTGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAGCCCTCTGCCATAAGTaGGCCTCAGCCCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: RVVCPPSLYIYGFQATAKALCHK*ASAQLH
Trigger: ATGAAGCTGGGCTGAGGCCAACTTATGGCAGAGGGC...TTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp GGACCCAGGACTGATCAGACAAAGCTCTCATTAGCAGAATGTGGGCACCTGCACCTAGCGGCTTTATTTTaGACATACACGACCTCAGAC +
Preference number: 5 (lower is better)
Translates to: GPRTDQTKLSLAECGHLHLAALF*TYTTSD
Trigger: GTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG...GTGCAGGTGCCCACATTCTGCTAATGAGAGCTTTGTCTGATCAGTCCTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCCTTTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTACAGATACCACGCCTTaGTATTCAGGGGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: PFKSKSVCPHGKFRTMVPTDTTP*YSGVNS
Trigger: GGAGTTCACCCCTGAATACAAAGGCGTGGTATCTGT...AGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGCCACCTTCGGACTCTTaGCCTCCTGTGAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMPPSDS*PPVSSQ
Trigger: CTGAGAGCTCACAGGAGGCAAAGAGTCCGAAGGTGG...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGAGAGGGTGCTAACCTaGGCAATGGCTGAAATCGGT +
Preference number: 5 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALERVLT*AMAEIG
Trigger: ACCGATTTCAGCCATTGCCAAGGTTAGCACCCTCTC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp AAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTGCACTAGCGGCTTTATTTTaGACATACACGACCTCAGAC +
Preference number: 5 (lower is better)
Translates to: KASLCVLTASSEQWSLPALAALF*TYTTSD
Trigger: GTCTGAGGTCGTGTATGTCAAAAATAAAGCCGCTAG...TGCAGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS TCA 90 bp CCTGTTCCACAGTCTCACTTTCCACATAAGGATAGGCCACTAAGTTaGTGTAACCATCACTGTCCCCCTCAAAACAGACAGATACCACGC +
Preference number: 5 (lower is better)
Translates to: PVPQSHFPHKDRPLS*CNHHCPPQNRQIPR
Trigger: GCGTGGTATCTGTCTGTTTTGAGGGGGACAGTGATGGTTACATCAACTTAGTGGCCTATCCTTATGTGGAAAGTGAGACTGTGGAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS-3UTR CAA 90 bp TGGTCTGCCCTCCTTCACTTTATATATATGGATTCCAGGCTACAGCTAAAAACACCACCTTCGGACTCTTaGCCTCCTGTGAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: WSALLHFIYMDSRLQLKTPPSDS*PPVSSQ
Trigger: CTGAGAGCTCACAGGAGGCAAAGAGTCCGAAGGTGG...TGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGAAGGAGGGCAGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGAACACGCAGGGGTACTaGAAGTGGTGCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMNTQGY*KWCTTF
Trigger: GAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTT...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTATTCTGCTATCAGGTCTTTATAAAAAGGCAACACCTGTGGAGGAAGGGCATGTTCAGGCCCCGCAGTTaGCTCAGGATAGGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LFCYQVFIKRQHLWRKGMFRPRS*LRIGSN
Trigger: GTTTGAGCCTATCCTGAGCAAACTGCGGGGCCTGAA...CATGCCCTTCCTCCACAGGTGTTGCCTTTTTATAAAGACCTGATAGCAGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp TTAAAAGCAAGTCTGTGTGTCCTCACGGCAAGTTCAGAACAATGGTCCCTGCCTACCCATGATCCCATGTaGCACTTTGTTCCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: LKASLCVLTASSEQWSLPTHDPM*HFVPKL
Trigger: CAACTTGGGAACAAAGTGCAACATGGGATCATGGGT...AGGCAGGGACCATTGTTCTGAACTTGCCGTGAGGACACACAGACTTGCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS CCA 90 bp GGATGCAGCACATGGGCCACAAAAGGAGAGCTACATAGAAGGTCCTaGCCAGGTGAAAGCCAATGGTCAGATTCTATTCAGCTTATTATT +
Preference number: 5 (lower is better)
Translates to: GCSTWATKGELHRRS*PGESQWSDSIQLII
Trigger: AATAATAAGCTGAATAGAATCTGACCATTGGCTTTCACCTGGCCAGGACCTTCTATGTAGCTCTCCTTTTGTGGCCCATGTGCTGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000498149.1
ENST00000613416.4
CDS-3UTR CAA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAGAACTCAAGCCACTGTaGCCATCTAGCATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALELKPL*PSSIWK
Trigger: TTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTC...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS-3UTR CAA 90 bp CCTTTAAAGCCAAACAGGCACTTGCCTAAAGTGACAATGAACAGTGTGGCCCTAAAGCCAAACAGGCACTaGCCTAAAGTGACAATGAAC +
Preference number: 5 (lower is better)
Translates to: PLKPNRHLPKVTMNSVALKPNRH*PKVTMN
Trigger: GTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTT...TAGGGCCACACTGTTCATTGTCACTTTAGGCAAGTGCCTGTTTGGCTTTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000613416.4
CDS CCA 72 bp CCAGGTTTCGGCCCGCCCCCTGGCAGGCAGCACAGGTaGCTGAGCACCGCTACAGCGGCCTCTCACCGGCCG +
Preference number: 6 (lower is better)
Translates to: PGFGPPPGRQHR*LSTATAASHRP
Trigger: CGGCCGGTGAGAGGCCGCTGTAGCGGTGCTCAGCCACCTGTGCTGCCTGCCAGGGGGCGGGCCGAAACCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
CDS TCA 72 bp GTTTCGGCCCGCCCCCTGGCAGGCAGCACAGGTGGCTaGGCACCGCTACAGCGGCCTCTCACCGGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: VSARPLAGSTGG*APLQRPLTGRL
Trigger: CAAGCGGCCGGTGAGAGGCCGCTGTAGCGGTGCTCAGCCACCTGTGCTGCCTGCCAGGGGGCGGGCCGAAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000468463.5
CDS GCA 72 bp GGCCTCTCACCGGCCGCTTGGTCCAGCTCCCGGCGCTaGCCACTGGGTACGGATCAACAACAAGATGGCGGC +
Preference number: 6 (lower is better)
Translates to: GLSPAAWSSSRR*PLGTDQQQDGG
Trigger: GCCGCCATCTTGTTGTTGATCCGTACCCAGTGGGCAGCGCCGGGAGCTGGACCAAGCGGCCGGTGAGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321599.9
CDS TCA 72 bp AGGCAGAGGGTCCCCCTTGCCATAATCATAGGGCCGTaGCACCGGCCTGCCTGGCTCGCGGGGGCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: RQRVPLAIIIGP*HRPAWLAGALA
Trigger: AGCCAAAGCCCCCGCGAGCCAGGCAGGCCGGTGTCACGGCCCTATGATTATGGCAAGGGGGACCCTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS GCA 72 bp GATACCACGCCGGCCGCTTGGTCCAGCTCCCGGCGCTaGCCACTGGGTACGGATCAACAACAAGATGGCGGC +
Preference number: 6 (lower is better)
Translates to: DTTPAAWSSSRR*PLGTDQQQDGG
Trigger: GCCGCCATCTTGTTGTTGATCCGTACCCAGTGGGCAGCGCCGGGAGCTGGACCAAGCGGCCGGCGTGGTATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460540.1
CDS GCA 72 bp TTCTCCTCCTTGTGGTCACTGCCACTGCCTGACCGGTaGAGGCTCCGGCGGGAGTGTTTGCGCCGAGGTTGC +
Preference number: 6 (lower is better)
Translates to: FSSLWSLPLPDR*RLRRECLRRGC
Trigger: GCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGACCACAAGGAGGAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS CCA 72 bp GGCCGTGACACCGGCCTGCCTGGCTCGCGGGGGCTTTaGCTTGCTTCGTCTAGTCTTAGCATCCAGCGTCCT +
Preference number: 6 (lower is better)
Translates to: GRDTGLPGSRGL*LASSSLSIQRP
Trigger: AGGACGCTGGATGCTAAGACTAGACGAAGCAAGCCAAAGCCCCCGCGAGCCAGGCAGGCCGGTGTCACGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS CAA 72 bp CCACTGCCTGACCGGTGCAGGCTCCGGCGGGAGTGTTaGCGCCGAGGTTGCTCCCGTTCTGTTGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: PLPDRCRLRREC*RRGCSRSVVSS
Trigger: GGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS GCA 72 bp CACTGCCTGACCGGTGCAGGCTCCGGCGGGAGTGTTTaGGCCGAGGTTGCTCCCGTTCTGTTGTGTCATCCT +
Preference number: 6 (lower is better)
Translates to: HCLTGAGSGGSV*AEVAPVLLCHP
Trigger: AGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS GCA 72 bp CCCCCTTGCCATAATCATAGGGCCGTGACACCGGCCTaGCTGGCTCGCGGGGGCTTTGGCTTGCTTCGTCTA +
Preference number: 6 (lower is better)
Translates to: PPCHNHRAVTPA*LARGGFGLLRL
Trigger: TAGACGAAGCAAGCCAAAGCCCCCGCGAGCCAGGCAGGCCGGTGTCACGGCCCTATGATTATGGCAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS GCA 72 bp GTCTCAGGAAGCAGCAGCCAGGCAGAGGGTCCCCCTTaGCATAATCATAGGGCCGTGACACCGGCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: VSGSSSQAEGPP*HNHRAVTPACL
Trigger: CAGGCAGGCCGGTGTCACGGCCCTATGATTATGGCAAGGGGGACCCTCTGCCTGGCTGCTGCTTCCTGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS CAA 90 bp TGGTCACTGCCACTGCCTGACCGGTGCAGGCTCCGGCGGGAGTGTTaGCGCCGAGGTTGCTCCCGTTCTGTTGTGTCATCCTGTTCCACA +
Preference number: 6 (lower is better)
Translates to: WSLPLPDRCRLRREC*RRGCSRSVVSSCST
Trigger: TGTGGAACAGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCGGTCAGGCAGTGGCAGTGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS GCA 72 bp CGGTGCAGGCTCCGGCGGGAGTGTTTGCGCCGAGGTTaGTCCCGTTCTGTTGTGTCATCCTGTTCCACAGTC +
Preference number: 6 (lower is better)
Translates to: RCRLRRECLRRG*SRSVVSSCSTV
Trigger: GACTGTGGAACAGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS CCA 72 bp CGGATCAGCGGAGTCCAGAGCTTCGGTCAGAGAAGCTaGTTTCCCGCTACTAGCCGGCCAACCCTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: RISGVQSFGQRS*FPATSRPTLRH
Trigger: GTGCCTGAGGGTTGGCCGGCTAGTAGCGGGAAACCAGCTTCTCTGACCGAAGCTCTGGACTCCGCTGATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS CAA 72 bp CCGGTGCAGGCTCCGGCGGGAGTGTTTGCGCCGAGGTaGCTCCCGTTCTGTTGTGTCATCCTGTTCCACAGT +
Preference number: 6 (lower is better)
Translates to: PVQAPAGVFAPR*LPFCCVILFHS
Trigger: ACTGTGGAACAGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGCACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS CAA 90 bp CATAGGGCCGTGACACCGGCCTGCCTGGCTCGCGGGGGCTTTGGCTaGCTTCGTCTAGTCTTAGCATCCAGCGTCCTGAAAATCACTCGC +
Preference number: 6 (lower is better)
Translates to: HRAVTPACLARGGFG*LRLVLASSVLKITR
Trigger: GCGAGTGATTTTCAGGACGCTGGATGCTAAGACTAGACGAAGCAAGCCAAAGCCCCCGCGAGCCAGGCAGGCCGGTGTCACGGCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS CAA 72 bp GTGACACCGGCCTGCCTGGCTCGCGGGGGCTTTGGCTaGCTTCGTCTAGTCTTAGCATCCAGCGTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: VTPACLARGGFG*LRLVLASSVLK
Trigger: TTTCAGGACGCTGGATGCTAAGACTAGACGAAGCAAGCCAAAGCCCCCGCGAGCCAGGCAGGCCGGTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495152.1
ENST00000498149.1
ENST00000613416.4
CDS GCA 72 bp ACTTGTAGAGCTTTCGGTCCTTGGACTCGGAGCGCATaGGGCTCAGCTGCTGCTTGTGACAACGCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: TCRAFGPWTRSA*GSAAACDNAGS
Trigger: GGAGCCTGCGTTGTCACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCTACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS CAA 72 bp ATCGTCGTAACGCATCATGCTGCTGTGTCCGCCTACTaGGTGGATGAAGGGCTCCAGGAGGACTCCCCGGTC +
Preference number: 6 (lower is better)
Translates to: IVVTHHAAVSAY*VDEGLQEDSPV
Trigger: GACCGGGGAGTCCTCCTGGAGCCCTTCATCCACCAAGTAGGCGGACACAGCAGCATGATGCGTTACGACGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS CAA 72 bp CGCGTGCCCATCTTCAGGTCCAACACGCAGGGGTACTaGAAGTGGTGCACCACGTTCTCAAGCAGGAGGAAC +
Preference number: 6 (lower is better)
Translates to: RVPIFRSNTQGY*KWCTTFSSRRN
Trigger: GTTCCTCCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTTGGACCTGAAGATGGGCACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000495798.1
ENST00000613416.4
CDS CAA 90 bp GCAGGCTCCGGCGGGAGTGTTTGCGCCGAGGTTGCTCCCGTTCTGTaGTGTCATCCTGTTCCACAGTCTCACTTTCCACATAAGGATAGG +
Preference number: 6 (lower is better)
Translates to: AGSGGSVCAEVAPVL*CHPVPQSHFPHKDR
Trigger: CCTATCCTTATGTGGAAAGTGAGACTGTGGAACAGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCCGGAGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS CAA 90 bp AGGCTCAAACAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATaGATAGAGGGCATTGCGGAAGCCTTCAATGGAGAGCCCACGGCC +
Preference number: 6 (lower is better)
Translates to: RLKQVTSQVQAIVQI*IEGIAEAFNGEPTA
Trigger: GGCCGTGGGCTCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTGTTTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000495798.1
ENST00000613416.4
CDS TCA 72 bp GCGTGCCCATCTTCAGGTCCAACACGCAGGGGTACTTaGAGTGGTGCACCACGTTCTCAAGCAGGAGGAACT +
Preference number: 6 (lower is better)
Translates to: ACPSSGPTRRGT*SGAPRSQAGGT
Trigger: AGTTCCTCCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTTGGACCTGAAGATGGGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000495798.1
ENST00000613416.4
CDS TCA 72 bp CAAGCAGGAGGAACTCTGGGCCACGGTCAAGGAGAATaGCAACCACACTCACCATCAGCCCCAGCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: QAGGTLGHGQGE*QPHSPSAPARK
Trigger: TTTCCTGGCTGGGGCTGATGGTGAGTGTGGTTGTCATTCTCCTTGACCGTGGCCCAGAGTTCCTCCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495798.1
CDS GCA 72 bp GGAGGACTCCCCGGTCTCCAGCCCGACTTGCATTCTTaGCATACTGCCCCACTTCCATGGTTTGACAAACAC +
Preference number: 6 (lower is better)
Translates to: GGLPGLQPDLHS*HTAPLPWFDKH
Trigger: GTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGGCTGGAGACCGGGGAGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS GCA 72 bp CCATCTAGCATCTGGAAAGGGACCTCTGAGTGGCTGTaGAGCTCCACCTTCGGACTCTTTGCCTCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: PSSIWKGTSEWL*SSTFGLFASCE
Trigger: CTCACAGGAGGCAAAGAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAGATGCTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS CCA 72 bp CTGTTGCCATCTAGCATCTGGAAAGGGACCTCTGAGTaGCTGTGCAGCTCCACCTTCGGACTCTTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLPSSIWKGTSE*LCSSTFGLFAS
Trigger: GGAGGCAAAGAGTCCGAAGGTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS CCA 72 bp CCCATCTTCAGGTCCAACACGCAGGGGTACTTGAAGTaGTGCACCACGTTCTCAAGCAGGAGGAACTCTGGG +
Preference number: 6 (lower is better)
Translates to: PIFRSNTQGYLK*CTTFSSRRNSG
Trigger: CCCAGAGTTCCTCCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTTGGACCTGAAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495798.1
CDS CAA 90 bp TCCAGCCCGACTTGCATTCTTGCCATACTGCCCCACTTCCATGGTTaGACAAACACACATTGCGTTGGGGGCCAGTTGCACACTGAGGGC +
Preference number: 6 (lower is better)
Translates to: SSPTCILAILPHFHG*TNTHCVGGQLHTEG
Trigger: GCCCTCAGTGTGCAACTGGCCCCCAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAATGCAAGTCGGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS CAA 90 bp AGGCTCCAGGGGTTGTGGCTGATCTTCTCAGAACTCAAGCCACTGTaGCCATCTAGCATCTGGAAAGGGACCTCTGAGTGGCTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: RLQGLWLIFSELKPL*PSSIWKGTSEWLCS
Trigger: GCTGCACAGCCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS GCA 72 bp ATCTTCAGGTCCAACACGCAGGGGTACTTGAAGTGGTaGACCACGTTCTCAAGCAGGAGGAACTCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: IFRSNTQGYLKW*TTFSSRRNSGP
Trigger: TGGCCCAGAGTTCCTCCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGTTGGACCTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495798.1
CDS CCA 72 bp GAAGTGGTGCACCACGTTCTCAAGCAGGAGGAACTCTaGGCCACGGTCAAGGAGAATGACAACCACACTCAC +
Preference number: 6 (lower is better)
Translates to: EVVHHVLKQEEL*ATVKENDNHTH
Trigger: GTGAGTGTGGTTGTCATTCTCCTTGACCGTGGCCCAGAGTTCCTCCTGCTTGAGAACGTGGTGCACCACTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495798.1
CDS CAA 72 bp GGCGGGAGTGTTTGCGCCGAGGTTGCTCCCGTTCTGTaGTGTCATCCTGTTCCACAGTCTCACTTTCCACAT +
Preference number: 6 (lower is better)
Translates to: GGSVCAEVAPVL*CHPVPQSHFPH
Trigger: ATGTGGAAAGTGAGACTGTGGAACAGGATGACACAACAGAACGGGAGCAACCTCGGCGCAAACACTCCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS TCA 72 bp GCTGCTTGTGACAACGCAGGCTCCAGGGGTTGTGGCTaGTCTTCTCAGAACTCAAGCCACTGTTGCCATCTA +
Preference number: 6 (lower is better)
Translates to: AACDNAGSRGCG*SSQNSSHCCHL
Trigger: TAGATGGCAACAGTGGCTTGAGTTCTGAGAAGATCAGCCACAACCCCTGGAGCCTGCGTTGTCACAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS GCA 72 bp GGTCCAGGCCATTGTGCAGATATTGATAGAGGGCATTaGGGAAGCCTTCAATGGAGAGCCCACGGCCATAGT +
Preference number: 6 (lower is better)
Translates to: GPGHCADIDRGH*GSLQWRAHGHS
Trigger: ACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000495798.1
ENST00000613416.4
CDS CCA 72 bp TTCTCAGAACTCAAGCCACTGTTGCCATCTAGCATCTaGAAAGGGACCTCTGAGTGGCTGTGCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: FSELKPLLPSSI*KGTSEWLCSST
Trigger: GGTGGAGCTGCACAGCCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS CAA 72 bp CAGGTCACGTCGCAGGTCCAGGCCATTGTGCAGATATaGATAGAGGGCATTGCGGAAGCCTTCAATGGAGAG +
Preference number: 6 (lower is better)
Translates to: QVTSQVQAIVQI*IEGIAEAFNGE
Trigger: CTCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAATATCTGCACAATGGCCTGGACCTGCGACGTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000495798.1
ENST00000613416.4
CDS CAA 72 bp GGGTTGTGGCTGATCTTCTCAGAACTCAAGCCACTGTaGCCATCTAGCATCTGGAAAGGGACCTCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: GLWLIFSELKPL*PSSIWKGTSEW
Trigger: CCACTCAGAGGTCCCTTTCCAGATGCTAGATGGCAACAGTGGCTTGAGTTCTGAGAAGATCAGCCACAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000613416.4
CDS TCA 72 bp CTTGCATTCTTGCCATACTGCCCCACTTCCATGGTTTaGCAAACACACATTGCGTTGGGGGCCAGTTGCACA +
Preference number: 6 (lower is better)
Translates to: LAFLPYCPTSMV*QTHIALGASCT
Trigger: TGTGCAACTGGCCCCCAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAATGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS CCA 72 bp GCAGATATTGATAGAGGGCATTGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGTACTTGTTCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: ADIDRGHCGSLQ*RAHGHSTCSCR
Trigger: TCTGCAGGAACAAGTACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAATATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000495798.1
ENST00000613416.4
CDS CCA 72 bp GCAGATATTGATAGAGGGCATTGCGGAAGCCTTCAATaGAGAGCCCACGGCCATAGTACTTGTTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: ADIDRGHCGSLQ*RAHGHSTCSCM
Trigger: CATGCAGGAACAAGTACTATGGCCGTGGGCTCTCCATTGAAGGCTTCCGCAATGCCCTCTATCAATATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468463.5
CDS TCA 72 bp CAAAACAGACAGATACCACGCCTTTGTATTCAGGGGTaGACTCCTTCATTTCGGGAGGGAGGGACTCGTAAA +
Preference number: 6 (lower is better)
Translates to: QNRQIPRLCIQG*TPSFREGGTRK
Trigger: TTTACGAGTCCCTCCCTCCCGAAATGAAGGAGTTCACCCCTGAATACAAAGGCGTGGTATCTGTCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4
CDS CCA 72 bp ACATGGGCCACAAAAGGAGAGCTACATAGAAGGTCCTaGCCAGGTGAAAGCCAATGGTCAGATTCTATTCAG +
Preference number: 6 (lower is better)
Translates to: TWATKGELHRRS*PGESQWSDSIQ
Trigger: CTGAATAGAATCTGACCATTGGCTTTCACCTGGCCAGGACCTTCTATGTAGCTCTCCTTTTGTGGCCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321599.9
ENST00000468463.5
ENST00000479464.1
ENST00000498149.1
ENST00000613416.4
CDS TCA 72 bp CAGTCTCACTTTCCACATAAGGATAGGCCACTAAGTTaGTGTAACCATCACTGTCCCCCTCAAAACAGACAG +
Preference number: 6 (lower is better)
Translates to: QSHFPHKDRPLS*CNHHCPPQNRQ
Trigger: CTGTCTGTTTTGAGGGGGACAGTGATGGTTACATCAACTTAGTGGCCTATCCTTATGTGGAAAGTGAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321599.9
ENST00000395238.5
ENST00000460540.1
ENST00000468463.5
ENST00000479464.1
ENST00000613416.4