RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INVS (Homo sapiens)

Ensembl gene IDs: ENSG00000119509

Ensembl transcript IDs: ENST00000262456.6, ENST00000262457.7, ENST00000374921.3, ENST00000460636.2, ENST00000466647.5, ENST00000480309.1, ENST00000496467.5

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCTGCTATGGGACAGGCTTCCTATCTCATTTAGGTTCATCTCTTaGAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCC +
Preference number: 1 (lower is better)
Translates to: RLLWDRLPISFRFIS*NKKPVPASWQKSQP
Trigger: GGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGATGAACCTAAATGAGATAGGAAGCCTGTCCCATAGCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR GCA 90 bp TTTCCAACTGTACAGACTGAGGTGAAAGCAGACACTCAGGCACTTTaGACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: FPTVQTEVKADTQAL*TDIVYAGPFSAGCV
Trigger: AACACAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTGTCTGCTTTCACCTCAGTCTGTACAGTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR GCA 90 bp TGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTTaGTGCATGAACAGTCTGGTCTGTAAACCCTACCTGACAGAATCC +
Preference number: 1 (lower is better)
Translates to: WSENTSRTLTPELAP*CMNSLVCKPYLTES
Trigger: GGATTCTGTCAGGTAGGGTTTACAGACCAGACTGTTCATGCAGCAAGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR GCA 90 bp CAGGATTTTGACTTTCAAGTTCCAGCCACTATTATCTCCAAACTCTaGCTCAGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGG +
Preference number: 1 (lower is better)
Translates to: QDFDFQVPATIISKL*LSFFSLVRLLLPVR
Trigger: CCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACTGAGGCAGAGTTTGGAGATAATAGTGGCTGGAACTTGAAAGTCAAAATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR GCA 90 bp TCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTTGCTaGATGAACAGTCTGGTCTGTAAACCCTACCTGACAGAATCCTTG +
Preference number: 1 (lower is better)
Translates to: SENTSRTLTPELAPC*MNSLVCKPYLTESL
Trigger: CAAGGATTCTGTCAGGTAGGGTTTACAGACCAGACTGTTCATGCAGCAAGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR CCA 90 bp GCCAACAGAAATGGCATTTTAAGAAGATTGCTCACTTCTGCAAGTTaGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCT +
Preference number: 1 (lower is better)
Translates to: ANRNGILRRLLTSAS*SENTSRTLTPELAP
Trigger: AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGAAGTGAGCAATCTTCTTAAAATGCCATTTCTGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR CCA 90 bp GTTTACGAACCTTCTTTCTTTGCACTGATATATGAAAATAATGTTTaGGCGTTCCTATTGATGTGTAGGCTGGCTTCCCGGACTAGCACA +
Preference number: 1 (lower is better)
Translates to: VYEPSFFALIYENNV*AFLLMCRLASRTST
Trigger: TGTGCTAGTCCGGGAAGCCAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAAGAAAGAAGGTTCGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR CCA 90 bp CACAGCAGCTTTCCCCTTAAACAATGTGAAAGAGCCCATCATCACTaGATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTG +
Preference number: 1 (lower is better)
Translates to: HSSFPLKQCERAHHH*ILFKPGVLRMLGCV
Trigger: CACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATTGTTTAAGGGGAAAGCTGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR TCA 90 bp TGCCTCCATAATGTATCTCTTAAACCCAATTCCTCTCTATTGGCCTaGACTATAATAGCAATCTATGTATCTCCACTCTTTCTCTTCCAA +
Preference number: 1 (lower is better)
Translates to: CLHNVSLKPNSSLLA*TIIAIYVSPLFLFQ
Trigger: TTGGAAGAGAAAGAGTGGAGATACATAGATTGCTATTATAGTTCAGGCCAATAGAGAGGAATTGGGTTTAAGAGATACATTATGGAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR CCA 90 bp TACATGAGTGTTCATGATTACATAAATAGCACACTTCTGCATTCATaGATACCAGAATTAAGTGGGACAGACAATACTTGGAAAGGATAT +
Preference number: 1 (lower is better)
Translates to: YMSVHDYINSTLLHS*IPELSGTDNTWKGY
Trigger: ATATCCTTTCCAAGTATTGTCTGTCCCACTTAATTCTGGTATCCATGAATGCAGAAGTGTGCTATTTATGTAATCATGAACACTCATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR TCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAGGCAACTTGTGGCCTTaGGAGGCTAACGTAGGAACT +
Preference number: 2 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEGNLWP*EANVGT
Trigger: AGTTCCTACGTTAGCCTCTCAAGGCCACAAGTTGCC...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR GCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTCACAGACATAGTCTATaGAGGTCCTTTCAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: SASWSENTSRTLTPELAPHRHSL*RSFQCR
Trigger: CCTGCACTGAAAGGACCTGCATAGACTATGTCTGTG...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR TCA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGTCCTCTCCAGGATTTTaGCTTTCAAGTTCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMSSPGF*LSSSSH
Trigger: GTGGCTGGAACTTGAAAGTCAAAATCCTGGAGAGGA...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR GCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATCTTGCATTCTTTCTCTaGAATTCCCTCCTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: HREFVVQKPGTDREQILNLAFFL*NSLLSR
Trigger: CCTGGAGAGGAGGGAATTGCAGAGAAAGAATGCAAG...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR CAA 90 bp TCTTTCTTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATaGATGTGTAGGCTGGCTTCCCGGACTAGCACACGATACATGGTC +
Preference number: 2 (lower is better)
Translates to: SFFALIYENNVWAFL*MCRLASRTSTRYMV
Trigger: GACCATGTATCGTGTGCTAGTCCGGGAAGCCAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR TCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAGAGAAAGCCATTCAGTaGAGACGTGGCGGCAACTTG +
Preference number: 2 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEEKAIQ*RRGGNL
Trigger: CAAGTTGCCGCCACGTCTTCACTGAATGGCTTTCTC...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR GCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATATTATCTCCAAACTCTaGCTCAGTTTCTTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: HREFVVQKPGTDREQILNIISKL*LSFFSL
Trigger: CAGGCTGAAGAAACTGAGGCAGAGTTTGGAGATAAT...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR TCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACCCATATGCTTTAAAATaGGAATGGATCCCCATACAA +
Preference number: 2 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNPYALK*EWIPIQ
Trigger: TTGTATGGGGATCCATTCTCATTTTAAAGCATATGG...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR GCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGGGTCATAGGCGGTTGTaGATTGTGCATTTCATAGGA +
Preference number: 2 (lower is better)
Translates to: FALIYENNVWAFLLMCRLGHRRL*IVHFIG
Trigger: TCCTATGAAATGCACAATGCACAACCGCCTATGACC...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR GCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAGACACTCAGGCACTTTaGACAGACATAGTCTATGCA +
Preference number: 2 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEDTQAL*TDIVYA
Trigger: TGCATAGACTATGTCTGTGCAAAGTGCCTGAGTGTC...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR GCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACAGGGTTGTATTCTTTTaGATTCCAGTTTGGAAAATG +
Preference number: 2 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNRVVFF*IPVWKM
Trigger: CATTTTCCAAACTGGAATGCAAAAGAATACAACCCT...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR GCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACTTGTATCCAGATTCTTaGATTCTTTCTCTGCAATTC +
Preference number: 2 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNLYPDS*ILSLQF
Trigger: GAATTGCAGAGAAAGAATGCAAGAATCTGGATACAA...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR GCA 72 bp GTACAGACTGAGGTGAAAGCAGACACTCAGGCACTTTaGACAGACATAGTCTATGCAGGTCCTTTCAGTGCA +
Preference number: 3 (lower is better)
Translates to: VQTEVKADTQAL*TDIVYAGPFSA
Trigger: TGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTGTCTGCTTTCACCTCAGTCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR GCA 72 bp AATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTTaGTGCATGAACAGTCTGGTCTGTAAACCCTACCTG +
Preference number: 3 (lower is better)
Translates to: NTSRTLTPELAP*CMNSLVCKPYL
Trigger: CAGGTAGGGTTTACAGACCAGACTGTTCATGCAGCAAGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR CAA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTTCAGTGCAGGCTGTGTaGATTGACAAAACAATGCTG +
Preference number: 3 (lower is better)
Translates to: SASWSENTSRTLTPELAPSVQAV*IDKTML
Trigger: CAGCATTGTTTTGTCAATCAACACAGCCTGCACTGA...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR CAA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGCTCCTCTCCAGGATTTaGACTTTCAAGTTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMLLSRI*TFKFQP
Trigger: TGGCTGGAACTTGAAAGTCAAAATCCTGGAGAGGAG...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR CAA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATCTAGTCTCCCAGCTGTaGTTTAATACTAGGTTTCTT +
Preference number: 3 (lower is better)
Translates to: HREFVVQKPGTDREQILNLVSQL*FNTRFL
Trigger: AAGAAACCTAGTATTAAACAACAGCTGGGAGACTAG...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR CAA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACTTTAACAAACGCTTGTaGAATGAACACTTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNFNKRL*NEHFCL
Trigger: GAGGCAGAAGTGTTCATTCAACAAGCGTTTGTTAAA...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR-3UTR CAA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGTGGGACAGACAATACTaGGAAAGGATATTTGATATC +
Preference number: 3 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMWDRQY*ERIFDI
Trigger: GATATCAAATATCCTTTCCAAGTATTGTCTGTCCCA...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
3UTR CCA 72 bp AATGGCATTTTAAGAAGATTGCTCACTTCTGCAAGTTaGTCAGAAAATACAAGTAGAACGTTGACGCCTGAG +
Preference number: 3 (lower is better)
Translates to: NGILRRLLTSAS*SENTSRTLTPE
Trigger: CTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGAAGTGAGCAATCTTCTTAAAATGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
3UTR-3UTR CAA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGGGCATTTTAAGAAGATaGCTCACTTCTGCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: FALIYENNVWAFLLMCRLGILRR*LTSASW
Trigger: CCAACTTGCAGAAGTGAGCAATCTTCTTAAAATGCC...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCGCCTCCTCCAGGACTaGCGTCCCGGGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHRLLQD*RPGGGS
Trigger: GGAGCCGCCCCCGGGACGTCAGTCCTGGAGGAGGCG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGGGCCCGGCTCTGCCTaGTGGGCACATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPGPGSA*WAHPGC
Trigger: GCACCCAGGATGTGCCCAGCAGGCAGAGCCGGGCCC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGGGTTGTATTCTTTTGCCGCCTCCTCCAGGACTaGCGTCCCGGGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFFSLVRLLLPVRVVFFCRLLQD*RPGGGS
Trigger: GGAGCCGCCCCCGGGACGTCAGTCCTGGAGGAGGCG...GCAAAAGAATACAACCCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCCGGGCCGCCCCTCCTaGCGGGCCGGTACACTATAT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHPGRPS*RAGTLY
Trigger: ATATAGTGTACCGGCCCGGCAGGAGGGGCGGCCCGG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCCGGGCCGCCCCTCCTaGCGGGCCGGTACACTATAT +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLPGRPS*RAGTLY
Trigger: ATATAGTGTACCGGCCCGGCAGGAGGGGCGGCCCGG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACTGGGGGCCCGGCTCTaGCTGCTGGGCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPALGARL*LLGTSW
Trigger: CCAGGATGTGCCCAGCAGGCAGAGCCGGGCCCCCAG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACAGCAGGAGGCTGCTTaGTGGGGGCCCGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAQQEAA*WGPGSA
Trigger: GGCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCAGGAGGCTGCTTGCTaGGGGCCCGGCTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLQEAAC*GPGSAC
Trigger: GCAGGCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGCTTGGCTCAGGGCCTTaGGCCACGTTGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRLGSGP*ATLPAG
Trigger: TCCTGCTGGCAACGTGGCCCAAGGCCCTGAGCCAAG...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCTGGGGGCCCGGCTCTaGCTGCTGGGCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNLGARL*LLGTSW
Trigger: CCAGGATGTGCCCAGCAGGCAGAGCCGGGCCCCCAG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGCCAGGCGCGCTGGATaGCTGCTGCTGCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPARRAG*LLLPCS
Trigger: AGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGGGACAGGTGCTTCCTaGGCTGGTAGCTTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPGTGAS*AGSFAR
Trigger: CCTGGCGAAGCTACCAGCTCAGGAAGCACCTGTCCC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCAGGCCCAGCCACCCTaGTACAGGAGGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHQAQPP*YRRAAS
Trigger: TGAAGCAGCCCTCCTGTATCAGGGTGGCTGGGCCTG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGGAAGGCTTGCAGCTaGCCGCCTGGAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPWKACS*PPGVLS
Trigger: GGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGTGGCTATCGTGCGGTaGAAGGCTTGCAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPVAIVR*KACSCP
Trigger: CGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCAC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGGGCACATTTGGCCTTaGGTTCTGTGTCATGCCGCC +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRGHIWP*VLCHAA
Trigger: GGCGGCATGACACAGAACCCAAGGCCAAATGTGCCC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACGGCCTTGGGCCACGTTaGCAGCAGGAGGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNGLGPR*QQEAAC
Trigger: GCAAGCAGCCTCCTGCTGGCAACGTGGCCCAAGGCC...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTCTGAGGAAACATGCTaGTCCTTCTGGAGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRSEETC*SFWRAP
Trigger: CGGAGCCCTCCAGAAGGAGCAGCATGTTTCCTCAGA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGACTCTTGGGGGCCTTaGTTACTGCAGTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRDSWGP*LLQWFG
Trigger: CCCAAACCACTGCAGTAAGCAAGGCCCCCAAGAGTC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTTGGCTCAGGGCCTTaGGCCACGTTGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLGSGP*ATLPAG
Trigger: TCCTGCTGGCAACGTGGCCCAAGGCCCTGAGCCAAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTTCGCCAGGCGCGCTaGATGACTGCTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLRQAR*MTAAAL
Trigger: CAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACTTCGCCAGGCGCGCTaGATGACTGCTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPALRQAR*MTAAAL
Trigger: CAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTTGCAGCTGCCCGCCTaGAGTCCTCTCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRLQLPA*SPLLSH
Trigger: ATGAGAAAGGAGAGGACTCCAGGCGGGCAGCTGCAA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCTGCTGGGCTTCCAGTaGCTATCGTGCGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHLLGFQ*LSCGGR
Trigger: CCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGCACCGTGCTCCAACATaGACTGGATCACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRHRAPT*TGSLHG
Trigger: GCCATGAAGTGATCCAGTTCATGTTGGAGCACGGTG...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACGCCAGGCGCGCTGGATaGCTGCTGCTGCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNARRAG*LLLPCS
Trigger: AGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGC...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGGTGGACTTTGTGCCTaGGGTGCCCTTGGATGGACT +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPGGLCA*GALGWT
Trigger: AGTCCATCCAAGGGCACCTCAGGCACAAAGTCCACC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGGGTGGACTTTGTGCCTaGGGTGCCCTTGGATGGACT +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLGGLCA*GALGWT
Trigger: AGTCCATCCAAGGGCACCTCAGGCACAAAGTCCACC...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGATGGACAGGGCACCGTaGTCCAACATGAACTGGATC +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRMDRAP*SNMNWI
Trigger: GATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCAT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTCTCCAGCTCCAAGCTaGTTCATATGCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRSPAPS*FICRRW
Trigger: CCACCTTCGGCATATGAAGCAGCTTGGAGCTGGAGA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGAAGCCTTTCCCCTTTaGACACCGCTCATCGCCAGC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPEAFPL*TPLIAS
Trigger: GCTGGCGATGAGCGGTGTGCAAAGGGGAAAGGCTTC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGGCTCCTGTGCCGGGTaGTCAAGTGCAAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPGSCAG*SSAKES
Trigger: TGACTCCTTTGCACTTGACCACCCGGCACAGGAGCC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGGCTGCCCAGTGAAGTaGGATCTTGCCTTCAACATC +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRGCPVK*DLAFNI
Trigger: GATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTAGACAGGGAAGGGCCTaGGGTCTGCAGGAATCTGGG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLRQGRA*GLQESG
Trigger: CCCAGATTCCTGCAGACCCCAGGCCCTTCCCTGTCT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTGCTGGGCACATCCTaGGTGCTAGGCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLLGTS*VLGRQG
Trigger: TCCCTGTCTGCCTAGCACCCAGGATGTGCCCAGCAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACTGCTGGGCACATCCTaGGTGCTAGGCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPALLGTS*VLGRQG
Trigger: TCCCTGTCTGCCTAGCACCCAGGATGTGCCCAGCAG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTGTCATGCCGCCTGCTaGGCTTCCAGTGGCTATCGT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHCHAAC*ASSGYR
Trigger: ACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGCTCCTTCGTTCTCTCTaGATTATCTGCAGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRLLRSL*IICSRS
Trigger: GCTCCGACTGCAGATAATTCAGAGAGAACGAAGGAG...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGGTTGCTCACTGAGTTaGGACGCAGCACAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPGCSLS*DAAQKR
Trigger: CCTCTTCTGTGCTGCGTCTCAACTCAGTGAGCAACC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGCCGGGCCGCCCCTCCTaGCGGGCCGGTACACTATAT +
Preference number: 4 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMPGRPS*RAGTLY
Trigger: ATATAGTGTACCGGCCCGGCAGGAGGGGCGGCCCGG...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCACTTAGGGCTCCTGTaGCGGGTGGTCAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHHLGLL*RVVKCK
Trigger: TTTGCACTTGACCACCCGGCACAGGAGCCCTAAGTG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCACTTAGGGCTCCTGTaGCGGGTGGTCAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLHLGLL*RVVKCK
Trigger: TTTGCACTTGACCACCCGGCACAGGAGCCCTAAGTG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCACAGCAGGAGGCTGCTTaGTGGGGGCCCGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPQQEAA*WGPGSA
Trigger: GGCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTG...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTGGCCTTGGGCCACGTTaGCAGCAGGAGGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPGLGPR*QQEAAC
Trigger: GCAAGCAGCCTCCTGCTGGCAACGTGGCCCAAGGCC...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTCCTGGAGATCCTCTaGTGTCTCTTGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLLEIL*CLLAQG
Trigger: GCCCTGAGCCAAGAGACAGCAGAGGATCTCCAGGAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGTCTGAGGAAACATGCTaGTCCTTCTGGAGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLSEETC*SFWRAP
Trigger: CGGAGCCCTCCAGAAGGAGCAGCATGTTTCCTCAGA...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGAACTCCTGGATGCCTaGTTCCATCACTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRELLDA*FHHCLH
Trigger: ATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGACTCTTGGGGGCCTTaGTTACTGCAGTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHDSWGP*LLQWFG
Trigger: CCCAAACCACTGCAGTAAGCAAGGCCCCCAAGAGTC...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGCTTGGTGGACTTTGTaGCTGAGGTGCCCTTGGATG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPAWWTL*LRCPWM
Trigger: CATCCAAGGGCACCTCAGGCACAAAGTCCACCAAGC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACTGATACAGGAGGGCTaGTTCACGAAGCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPLIQEG*FTKPFP
Trigger: GGGGAAAGGCTTCGTGAAGCAGCCCTCCTGTATCAG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTCAATATTCACACTCTaGCCAGAGAGGGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRSIFTL*PERGPG
Trigger: ACCTGGTCCCCTCTCTGGGCAGAGTGTGAATATTGA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGCATAGTGCAAAGGTGTaGCTCCTTGGCTGTCAGATG +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRHSAKV*LLGCQM
Trigger: CATCTGACAGCCAAGGAGCCACACCTTTGCACTATG...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGGGTCTGCAGGAATCTaGGCTCCGCCTTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPGSAGI*APPSFL
Trigger: CAAAAAGGAAGGCGGAGCCCAGATTCCTGCAGACCC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCACAGGAGGCTGCTTGCTaGGGGCCCGGCTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPQEAAC*GPGSAC
Trigger: GCAGGCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTG...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTCCTTCCTCCAAACCTaGAGGAGCAATGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRSFLQT*RSNAVD
Trigger: GTCTACAGCATTGCTCCTCCAGGTTTGGAGGAAGGA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACCTTGGATGGACTCTTaGGGGCCTTGCTTACTGCAG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPPWMDS*GPCLLQ
Trigger: CTGCAGTAAGCAAGGCCCCCAAGAGTCCATCCAAGG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCCTTGGATGGACTCTTaGGGGCCTTGCTTACTGCAG +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLPWMDS*GPCLLQ
Trigger: CTGCAGTAAGCAAGGCCCCCAAGAGTCCATCCAAGG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGCACTGAGTGCTTGGTaGACTTTGTGCCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHALSAW*TLCLRC
Trigger: GCACCTCAGGCACAAAGTCCACCAAGCACTCAGTGC...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACTTGGTGTACGATGGTaGGGAGGATTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPLGVRW*GGFCPA
Trigger: TGCTGGGCAGAATCCTCCCCACCATCGTACACCAAG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACCAGTACCAGCTAGCTaGCAGAAATCCCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPPVPAS*QKSQPS
Trigger: GCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTCGCCTCCTCCAGGACTaGCGTCCCGGGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSRLLQD*RPGGGS
Trigger: GGAGCCGCCCCCGGGACGTCAGTCCTGGAGGAGGCG...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTCAGCAACTGCAAAGTaGAGAGGAGTTCGACCCTCG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHSATAK*RGVRPS
Trigger: CGAGGGTCGAACTCCTCTTCACTTTGCAGTTGCTGA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCACCGTGCTCCAACATaGACTGGATCACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLHRAPT*TGSLHG
Trigger: GCCATGAAGTGATCCAGTTCATGTTGGAGCACGGTG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTGTTCCCTGCAAATCTaGGGAAACATGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRCSLQI*GNMLLL
Trigger: AAGGAGCAGCATGTTTCCTCAGATTTGCAGGGAACA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGGTTGCTCACTGAGTTaGGACGCAGCACAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLGCSLS*DAAQKR
Trigger: CCTCTTCTGTGCTGCGTCTCAACTCAGTGAGCAACC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTAGCACCTTCCTCCTCTaGGCTCTTGAGTGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLSTFLL*ALECAF
Trigger: AAAGGCGCACTCAAGAGCTCAGAGGAGGAAGGTGCT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGATAGCCTCCATATGCTaGACACTGCAAAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRIASIC*TLQRGS
Trigger: AGAACCCCTTTGCAGTGTGCAGCATATGGAGGCTAT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATTGCCAGCAGGAGGCTaGTTGCTGGGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPLPAGG*LLGARL
Trigger: GAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTGGCAA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCAGAGGGAACTCCTGGATaGCTGCTTCCATCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAEGTPG*LLPSLP
Trigger: AGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTC...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGCGCTGGATGACTGCTaGTGCCTTGTTCTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPALDDC*CLVLFA
Trigger: CGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCAAGCTGCTTCATATaGCGAAGGTGGGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLPSCFI*RRWDRC
Trigger: GCACCTGTCCCACCTTCGGCATATGAAGCAGCTTGG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACGGCTCCTGTGCCGGGTaGTCAAGTGCAAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNGSCAG*SSAKES
Trigger: TGACTCCTTTGCACTTGACCACCCGGCACAGGAGCC...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTCACGGTGCTGACATaGCCAGAAAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPFTVLT*PERAAA
Trigger: TGCTGCTGCTCTTTCTGGCCATGTCAGCACCGTGAA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCTTGTATGGCTGCGATaGACAGGGCACCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNLVWLR*TGHRAP
Trigger: TGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCGGCGATGTCTTGTATaGCTGCGATGGACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNRRCLV*LRWTGH
Trigger: GTGCCCTGTCCATCGCAGCCATACAAGACATCGCCG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACATGCTGCTCCTTCTaGAGGGCTCCGCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNTCCSF*RAPPRD
Trigger: GTCTCTAGGCGGAGCCCTCCAGAAGGAGCAGCATGT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGTTCATATGCCGAAGGTaGGACAGGTGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLFICRR*DRCFLS
Trigger: GCTCAGGAAGCACCTGTCCCACCTTCGGCATATGAA...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGCACTGAGTGCTTGGTaGACTTTGTGCCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLALSAW*TLCLRC
Trigger: GCACCTCAGGCACAAAGTCCACCAAGCACTCAGTGC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCAGAGTTTCCTACGATaGGCCTCTGTAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLQSFLR*ASVEHP
Trigger: AGGGTGCTCTACAGAGGCTCATCGTAGGAAACTCTG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTGGTTGGCTGCCCAGTaGAGTGGGATCTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNWLAAQ*SGILPS
Trigger: TGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATATAACTTCACGGTGCTaGCATGGCCAGAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHITSRC*HGQKEQ
Trigger: CTGCTCTTTCTGGCCATGTCAGCACCGTGAAGTTAT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGATTTGCTTAAGCACTaGGTGCTTGGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRDLLKH*VLGGLC
Trigger: ACAAAGTCCACCAAGCACTCAGTGCTTAAGCAAATC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTCCTCCTCTGAGCTCTTaGGTGCGCCTTTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPPPLSS*VRLFWG
Trigger: CCCCCAGAAAAGGCGCACTCAAGAGCTCAGAGGAGG...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGCTCTGTGGCAAATGTaGATAGAGCCCTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLALWQM*IEPSCE
Trigger: CTCACAGGAGGGCTCTATTCACATTTGCCACAGAGC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGAGAAAGCCATTCAGTaGAGACGTGGCGGCAACTTG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLEKAIQ*RRGGNL
Trigger: CAAGTTGCCGCCACGTCTTCACTGAATGGCTTTCTC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGTTGGTATTCAGCACTaGGAAAGCCATTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRVGIQH*ESHSVK
Trigger: CTTCACTGAATGGCTTTCTCAGTGCTGAATACCAAC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGCTTCAGAAGAGCATCTaGACAATCCAATCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRLQKSI*TIQSVS
Trigger: GCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAG...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGAAACTTCAGCAGAAGTaGCAAACACTTAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRKLQQK*QTLRAP
Trigger: AGGAGCCCTAAGTGTTTGGCACTTCTGCTGAAGTTT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGATCCACTTCTCCTGGTaGCATAAACTTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRIHFSW*HKLQQK
Trigger: CTTCTGCTGAAGTTTATGGCACCAGGAGAAGTGGAT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGATCTTTATGGTTGGCTaGCCAGTGAAGTGGGATCTT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRIFMVG*PVKWDL
Trigger: AAGATCCCACTTCACTGGGCAGCCAACCATAAAGAT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGAAAGAGCAGCAGCATaGAAAGCTGTACCTCCATAT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRERAAA*KAVPPY
Trigger: ATATGGAGGTACAGCTTTGCATGCTGCTGCTCTTTC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCCATATGCTGCACACTaGAAAGGGGTTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLPYAAH*KGVLPA
Trigger: TGCAGGAAGAACCCCTTTGCAGTGTGCAGCATATGG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACGATGTCTTGTATGGCTaGGATGGACAGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNDVLYG*DGQGTV
Trigger: CACGGTGCCCTGTCCATCGCAGCCATACAAGACATC...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGGCGCGCTGGATGACTaGTGCTGCCTTGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLGALDD*CCLVLF
Trigger: AAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGAATGCTGTAGACTCTTaGCTCCATCTGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRNAVDS*LHLSTS
Trigger: AGATGTGGACAGATGGAGGCAAGAGTCTACAGCATT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTAGAGAGGGGACCAGGTaGTGGATCAGTCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLREGTR*WISLLR
Trigger: TCTAAGGAGACTGATCCAGCACCTGGTCCCCTCTCT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGACACTCAGGCACTTTaGACAGACATAGTCTATGCA +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRDTQAL*TDIVYA
Trigger: TGCATAGACTATGTCTGTGCAAAGTGCCTGAGTGTC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGGCTGCCCAGTGAAGTaGGATCTTGCCTTCAACATC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLGCPVK*DLAFNI
Trigger: GATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCATAGTGCAAAGGTGTaGCTCCTTGGCTGTCAGATG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHHSAKV*LLGCQM
Trigger: CATCTGACAGCCAAGGAGCCACACCTTTGCACTATG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTTCACGGTGCTGACATaGCCAGAAAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLFTVLT*PERAAA
Trigger: TGCTGCTGCTCTTTCTGGCCATGTCAGCACCGTGAA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTCCTTCCTCCAAACCTaGAGGAGCAATGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHSFLQT*RSNAVD
Trigger: GTCTACAGCATTGCTCCTCCAGGTTTGGAGGAAGGA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCAGAGTTTCCTACGATaGGCCTCTGTAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNQSFLR*ASVEHP
Trigger: AGGGTGCTCTACAGAGGCTCATCGTAGGAAACTCTG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGATGCATCTCACTGTGTaGACAGCACTTGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRMHLTV*TALGSL
Trigger: TAAAGATCCAAGTGCTGTTCACACAGTGAGATGCAT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTCAGCAACTGCAAAGTaGAGAGGAGTTCGACCCTCG +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNSATAK*RGVRPS
Trigger: CGAGGGTCGAACTCCTCTTCACTTTGCAGTTGCTGA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTATAACTTCACGGTGCTaGCATGGCCAGAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLITSRC*HGQKEQ
Trigger: CTGCTCTTTCTGGCCATGTCAGCACCGTGAAGTTAT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGAACTGCCATGCAGTTaGTATAGCCTCCATATGCTG +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPELPCS*YSLHML
Trigger: CAGCATATGGAGGCTATATCAACTGCATGGCAGTTC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAAGACAGCTTGGATTTTaGAGGCGGCGATGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPRQLGF*RRRCLV
Trigger: TACAAGACATCGCCGCCTTCAAAATCCAAGCTGTCT...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCTCGGAAGGCTTTTCTaGCCTTGTACCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLLGRLF*PCTLCR
Trigger: TCTACAAAGGGTACAAGGTCAGAAAAGCCTTCCGAG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGTTCCCTGCAAATCTaGGGAAACATGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPCSLQI*GNMLLL
Trigger: AAGGAGCAGCATGTTTCCTCAGATTTGCAGGGAACA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGTGCCTTCATTGGGTCTaGAGTGGACACAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLCLHWV*SGHKQI
Trigger: AATCTGCTTGTGTCCACTTCAGACCCAATGAAGGCA...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACTCCTTCGTTCTCTCTaGATTATCTGCAGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPALLRSL*IICSRS
Trigger: GCTCCGACTGCAGATAATTCAGAGAGAACGAAGGAG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTGCCGGGTGGTCAAGTaGAAAGGAGTCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNCRVVK*KGVISS
Trigger: GGAAGAGATGACTCCTTTGCACTTGACCACCCGGCA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATACTGCCTTTGCCAGCTaGCCACATAAAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHTAFAS*PHKGCS
Trigger: AGAACATCCTTTATGTGGGCAGCTGGCAAAGGCAGT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACATGGACAGGGCACCGTaGTCCAACATGAACTGGATC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNMDRAP*SNMNWI
Trigger: GATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCAT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAGGGCCCGGCTCTGCCTaGTGGGCACATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEGPGSA*WAHPGC
Trigger: GCACCCAGGATGTGCCCAGCAGGCAGAGCCGGGCCC...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAAATCTGAGGAAACATaGTGCTCCTTCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHKSEET*CSFWRA
Trigger: AGCCCTCCAGAAGGAGCAGCATGTTTCCTCAGATTT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACGCGCTGGATGACTGCTaGTGCCTTGTTCTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNALDDC*CLVLFA
Trigger: CGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGC...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACCTGAGTTAGCACCTTaGTGCATGAACAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAPELAP*CMNSLV
Trigger: GACCAGACTGTTCATGCAGCAAGGTGCTAACTCAGG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTGGACAATCTGTGCATaGCCTAATAAAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHWTICA*PNKAAQ
Trigger: CTGGGCAGCTTTATTAGGCCATGCACAGATTGTCCA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGCTTTCTAAAAGGAGATaGACAATCTGTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRLSKRR*TICAWP
Trigger: AGGCCATGCACAGATTGTCCATCTCCTTTTAGAAAG...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTCCTTGGCTGTCAGATaGGATAGTTCCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRSLAVR*DSSRLI
Trigger: AATAAGTCTGGAACTATCCCATCTGACAGCCAAGGA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAAAGGTGTGGCTCCTTaGCTGTCAGATGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHKGVAP*LSDGIV
Trigger: AACTATCCCATCTGACAGCCAAGGAGCCACACCTTT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGTGCTCCAACATGAACTaGATCACTTCATGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLCSNMN*ITSWRS
Trigger: TGAGCGCCATGAAGTGATCCAGTTCATGTTGGAGCA...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTCGGCGATGTCTTGTATaGCTGCGATGGACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPRRCLV*LRWTGH
Trigger: GTGCCCTGTCCATCGCAGCCATACAAGACATCGCCG...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAGGGTCTGCAGGAATCTaGGCTCCGCCTTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEGSAGI*APPSFL
Trigger: CAAAAAGGAAGGCGGAGCCCAGATTCCTGCAGACCC...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTTCATATGCCGAAGGTaGGACAGGTGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNFICRR*DRCFLS
Trigger: GCTCAGGAAGCACCTGTCCCACCTTCGGCATATGAA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTGTCACTTTGTTTCTTaGTGTACGATGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHCHFVS*CTMVGR
Trigger: CCTCCCCACCATCGTACACCAAGAAACAAAGTGACA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGGTGTTCTCCCAAACTaGTCTTCTTTGTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRGVLPN*SSLSLR
Trigger: TCTTAAAGACAAAGAAGATCAGTTTGGGAGAACACC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGCACAGAAGTGGCACTaGTCTGAAGAAAATGAAAGC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPAQKWH*SEENES
Trigger: GCTTTCATTTTCTTCAGATCAGTGCCACTTCTGTGC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAATTTGGGCGTTCCTATTaGTGTGTAGGCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEFGRSY*CVGWLP
Trigger: GGGAAGCCAGCCTACACATCAATAGGAACGCCCAAA...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCAATTCACATCTGCTCCTaGCTTCAGAAGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAIHICS*LQKSIC
Trigger: GCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAAT...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAAAACTTCAGCAGAAGTaGCAAACACTTAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPKLQQK*QTLRAP
Trigger: AGGAGCCCTAAGTGTTTGGCACTTCTGCTGAAGTTT...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGATCTTTATGGTTGGCTaGCCAGTGAAGTGGGATCTT +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLIFMVG*PVKWDL
Trigger: AAGATCCCACTTCACTGGGCAGCCAACCATAAAGAT...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATATTCCCATCAGCAACTaGAAAGTGAAGAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHIPISN*KVKRSS
Trigger: CGAACTCCTCTTCACTTTGCAGTTGCTGATGGGAAT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAATAAAGCTGCCCAGTaGAGTGGGGTTCGAAATAAG +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHNKAAQ*SGVRNK
Trigger: CTTATTTCGAACCCCACTGCACTGGGCAGCTTTATT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGATATAGCCTCCATATaGTGCACACTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLDIASI*CTLQRG
Trigger: ACCCCTTTGCAGTGTGCAGCATATGGAGGCTATATC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTTGTTGCAGGACCAATaGAAAGCTGTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHLLQDQ*KAVLPS
Trigger: AGAGGGAAGAACAGCTTTGCATTGGTCCTGCAACAA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTGTTGCAGGACCAATaGAAAGCTGTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPLLQDQ*KAVLPS
Trigger: AGAGGGAAGAACAGCTTTGCATTGGTCCTGCAACAA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTCCGCCTTCCTTTTTaGTGTTCTGCCTCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLRLPF*CSASFR
Trigger: ACGAAAAGAGGCAGAACAGCAAAAAGGAAGGCGGAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTAAATCTGAGGAAACATaGTGCTCCTTCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLKSEET*CSFWRA
Trigger: AGCCCTCCAGAAGGAGCAGCATGTTTCCTCAGATTT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCTGGATGACTGCTGCTaGCTTGTTCTTTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHLDDCC*LVLFAK
Trigger: TTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAATCTCCAGCTCCAAGCTaGTTCATATGCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTESPAPS*FICRRW
Trigger: CCACCTTCGGCATATGAAGCAGCTTGGAGCTGGAGA...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACAACCTGGAGGAGCAATaGTGTAGACTCTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNNLEEQ*CRLLPP
Trigger: TGGAGGCAAGAGTCTACAGCATTGCTCCTCCAGGTT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTGCTTAAGCACTGAGTaGTTGGTGGACTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLCLSTE*LVDFVP
Trigger: AGGCACAAAGTCCACCAAGCACTCAGTGCTTAAGCA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACACAGACATAGTCTATaGAGGTCCTTTCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAHRHSL*RSFQCR
Trigger: CCTGCACTGAAAGGACCTGCATAGACTATGTCTGTG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGGAGGGCTGTTCTCTaGCTATGGTCAGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPWRAVL*LWSVLF
Trigger: GAATAAAACTGACCATAGCCAGAGAACAGCCCTCCA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTGTGTGAACAGCACTTaGATCTTTATGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHCVNST*IFMVGC
Trigger: GCAGCCAACCATAAAGATCCAAGTGCTGTTCACACA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGTGTGAACAGCACTTaGATCTTTATGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPCVNST*IFMVGC
Trigger: GCAGCCAACCATAAAGATCCAAGTGCTGTTCACACA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTAACTGGATCACTTCATaGCGCTCACCAAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLNWITS*RSPSKA
Trigger: TGCTTTGCTTGGTGAGCGCCATGAAGTGATCCAGTT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTGCTCCAACATGAACTaGATCACTTCATGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLCSNMN*ITSWRS
Trigger: TGAGCGCCATGAAGTGATCCAGTTCATGTTGGAGCA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCTTCCTCTCGCTTTTTaGCAGCAGCATCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHLPLAF*QQHLFS
Trigger: TGAGAAAAGATGCTGCTGCCAAAAAGCGAGAGGAAG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAAGACAGGGAAGGGCCTaGGGTCTGCAGGAATCTGGG +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPRQGRA*GLQESG
Trigger: CCCAGATTCCTGCAGACCCCAGGCCCTTCCCTGTCT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACAACAGAGGGAACTCCTaGATGCCTGCTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNNRGNS*MPASIT
Trigger: AGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCAGCTGTCTCACCTCTaGACTTCTCAACAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNQLSHL*TSQQRE
Trigger: TTCCCTCTGTTGAGAAGTCCAGAGGTGAGACAGCTG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAGAGGGGACCAGGTGCTaGATCAGTCTCCTTAGATAC +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEEGTRC*ISLLRY
Trigger: GTATCTAAGGAGACTGATCCAGCACCTGGTCCCCTC...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACCTTTAATGAGTGTCTaGATCACATCTTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPPLMSV*ITSLCP
Trigger: GGGACACAAAGATGTGATTCAGACACTCATTAAAGG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTTCCCTCTTTGTCTTaGATGTTAGGGTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLPSLS*MLGSAL
Trigger: CAATGCAGACCCTAACATTCAAGACAAAGAGGGAAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCTCGGAAGGCTTTTCTaGCCTTGTACCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNLGRLF*PCTLCR
Trigger: TCTACAAAGGGTACAAGGTCAGAAAAGCCTTCCGAG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACATTCACATCTGCTCCTaGCTTCAGAAGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNIHICS*LQKSIC
Trigger: GCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAAT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAAGTTTTATTCACATCTaGTCCTGCCTTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPSFIHI*SCLQKS
Trigger: GCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACT...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTATCCACTTCTCCTGGTaGCATAAACTTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLIHFSW*HKLQQK
Trigger: CTTCTGCTGAAGTTTATGGCACCAGGAGAAGTGGAT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGAAAGAGCAGCAGCATaGAAAGCTGTACCTCCATAT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLERAAA*KAVPPY
Trigger: ATATGGAGGTACAGCTTTGCATGCTGCTGCTCTTTC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCAAAGGGGTTCTTCCTaGATAATCCTGGACATTTGG +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLQRGSS*IILDIW
Trigger: CCAAATGTCCAGGATTATGCAGGAAGAACCCCTTTG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAGAACTCCTGGATGCCTaGTTCCATCACTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEELLDA*FHHCLH
Trigger: ATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTC...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTGTGCGGTGGAAGGCTTaGAGCTGCCCGCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSVRWKA*SCPPGV
Trigger: GACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCAC...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCACTGTGTCATGCCGCCTaGTGGGCTTCCAGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPLCHAA*WASSGY
Trigger: ATAGCCACTGGAAGCCCAGCAGGCGGCATGACACAG...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTTGGATCTTTATGGTTaGCTGCCCAGTGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNLDLYG*LPSEVG
Trigger: TCCCACTTCACTGGGCAGCCAACCATAAAGATCCAA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTCTGGCTGTTTCATTTaGCCTTCTGGAGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLSGCFI*PSGVCS
Trigger: GGAACAAACTCCAGAAGGCCAAATGAAACAGCCAGA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCCTTGCTTACTGCAGTaGTTTGGGGGAATTTTAGTT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHPCLLQ*FGGILV
Trigger: AACTAAAATTCCCCCAAACCACTGCAGTAAGCAAGG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACCAGAGTTTCCTACGATaGGCCTCTGTAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNQSFLR*ASVEHP
Trigger: AGGGTGCTCTACAGAGGCTCATCGTAGGAAACTCTG...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR TCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATGGTTGGCTGCCCAGTaGAGTGGGATCTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPWLAAQ*SGILPS
Trigger: TGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTTTAATGAGTGTCTaGATCACATCTTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLPLMSV*ITSLCP
Trigger: GGGACACAAAGATGTGATTCAGACACTCATTAAAGG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAGGGACAGGTGCTTCCTaGGCTGGTAGCTTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEGTGAS*AGSFAR
Trigger: CCTGGCGAAGCTACCAGCTCAGGAAGCACCTGTCCC...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACGATTTGCTTAAGCACTaGGTGCTTGGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNDLLKH*VLGGLC
Trigger: ACAAAGTCCACCAAGCACTCAGTGCTTAAGCAAATC...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGGGTTGTATTCTTTTGCATTCACATCTGCTCCTaGCTTCAGAAGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SFFSLVRLLLPVRVVFFCIHICS*LQKSIC
Trigger: GCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAAT...GCAAAAGAATACAACCCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACCAATGTTAGAATCATaGTTGATGAGCAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPPMLES*LMSSFT
Trigger: TGTGAAGCTGCTCATCAAGCATGATTCTAACATTGG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGAGGGAACTCCTGGATaGCTGCTTCCATCACTGCCT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPEGTPG*LLPSLP
Trigger: AGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTAACCTGGAGGAGCAATaGTGTAGACTCTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPNLEEQ*CRLLPP
Trigger: TGGAGGCAAGAGTCTACAGCATTGCTCCTCCAGGTT...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACAGAAAATCTGAACTCTaGACTAGCTATGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNRKSEL*TSYASS
Trigger: GGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATTCCAGTGGCTATCGTaGGGTGGAAGGCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPFQWLS*GGRLAA
Trigger: AGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAATGGTGGGGAGGATTCTaGCCAGCATGGACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEWWGGF*PAWTAS
Trigger: GGAGGCGGTCCATGCTGGGCAGAATCCTCCCCACCA...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCGTTTCATTCTTCCCTaGCAACAGAAATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHRFILP*QQKWHF
Trigger: AAAATGCCATTTCTGTTGGCAGGGAAGAATGAAACG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACCAATGCCTTCTGGGCTaGAAGATGGAGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNQCLLG*KMEGCS
Trigger: AGAACAGCCCTCCATCTTGCAGCCCAGAAGGCATTG...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCATTAACGGCAGCAGCATaGACTTGTGATGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPALTAAA*TCDAND
Trigger: ATCATTAGCATCACAAGTCCATGCTGCTGCCGTTAA...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTGTATCCACTTCTCCTaGTGCCATAAACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNCIHFS*CHKLQQ
Trigger: CTGCTGAAGTTTATGGCACCAGGAGAAGTGGATACA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCATCCTTGGCTGTCAGATaGGATAGTTCCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPASLAVR*DSSRLI
Trigger: AATAAGTCTGGAACTATCCCATCTGACAGCCAAGGA...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAACAGGCTCGGAAAAGTaGAGTATGTTTCATAACATC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPTGSEK*SMFHNI
Trigger: GATGTTATGAAACATACTCCACTTTTCCGAGCCTGT...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTTCATTTGGCCTTCTaGAGTTTGTTCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPFHLAF*SLFPAN
Trigger: ATTTGCAGGGAACAAACTCCAGAAGGCCAAATGAAA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTTTTCTTGGTGTACGATaGTGGGGAGGATTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPFLGVR*WGGFCP
Trigger: TGGGCAGAATCCTCCCCACCATCGTACACCAAGAAA...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCCCTGCCAACAGAAATaGCATTTTAAGAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLPCQQK*HFKKIA
Trigger: AGCAATCTTCTTAAAATGCCATTTCTGTTGGCAGGG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACATTGCAGCTTTCATATaGGGTCAAGACATCAACCAC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNIAAFI*GQDINH
Trigger: GTGGTTGATGTCTTGACCTCATATGAAAGCTGCAAT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTACAAAATAGAGAGTaGTACTGTGGTACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPLQNRE*YCGTFC
Trigger: ACAGAAGGTACCACAGTATCACTCTCTATTTTGTAA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGGGTTGTATTCTTTTGCAATAGGGATGGGTACTaGGAGCATCCATCTATAAGC +
Preference number: 4 (lower is better)
Translates to: SFFSLVRLLLPVRVVFFCNRDGY*EHPSIS
Trigger: GCTTATAGATGGATGCTCTCAGTACCCATCCCTATT...GCAAAAGAATACAACCCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACAATGCAGAGCTGTTTaGTTGTTTTTATCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPQCRAV*LFLSCV
Trigger: TACACAGGATAAAAACAAGCAAACAGCTCTGCATTG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCAATGCAGAGCTGTTTaGTTGTTTTTATCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHQCRAV*LFLSCV
Trigger: TACACAGGATAAAAACAAGCAAACAGCTCTGCATTG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAACAAAGGGGTTCTTCCTaGATAATCCTGGACATTTGG +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEQRGSS*IILDIW
Trigger: CCAAATGTCCAGGATTATGCAGGAAGAACCCCTTTG...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGGCGCGCTGGATGACTaGTGCTGCCTTGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPGALDD*CCLVLF
Trigger: AAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAACTTTGTGCCTGAGGTaGCCTTGGATGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPTLCLR*PWMDSW
Trigger: CCAAGAGTCCATCCAAGGGCACCTCAGGCACAAAGT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAAGAAAATCTGAACTCTaGACTAGCTATGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTERKSEL*TSYASS
Trigger: GGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCT...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTTAACGGCAGCAGCATaGACTTGTGATGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNLTAAA*TCDAND
Trigger: ATCATTAGCATCACAAGTCCATGCTGCTGCCGTTAA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCACGCAATACATAAGTaGTGTTCTCCCAAACTGATC +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNHAIHK*CSPKLI
Trigger: GATCAGTTTGGGAGAACACCACTTATGTATTGCGTG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCTTTCTAAAAGGAGATaGACAATCTGTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNLSKRR*TICAWP
Trigger: AGGCCATGCACAGATTGTCCATCTCCTTTTAGAAAG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTAGAGAATGTCCATCTTaGTCAACTAGATCTACCCTT +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLRECPS*STRSTL
Trigger: AAGGGTAGATCTAGTTGACCAAGATGGACATTCTCT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTAACTGGATCACTTCATaGCGCTCACCAAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPNWITS*RSPSKA
Trigger: TGCTTTGCTTGGTGAGCGCCATGAAGTGATCCAGTT...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCATTTCATTTGGCCTTCTaGAGTTTGTTCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAFHLAF*SLFPAN
Trigger: ATTTGCAGGGAACAAACTCCAGAAGGCCAAATGAAA...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAATCTGGCTGTTTCATTTaGCCTTCTGGAGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTESGCFI*PSGVCS
Trigger: GGAACAAACTCCAGAAGGCCAAATGAAACAGCCAGA...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTTCATTGGGTCTGAAGTaGACACAAGCAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPSLGLK*TQADWP
Trigger: AGGCCAATCTGCTTGTGTCCACTTCAGACCCAATGA...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCAGTCGGAGCTCTCTaGACTTCTCAACAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPAVGAL*TSQQRE
Trigger: TTCCCTCTGTTGAGAAGTCCAGAGAGCTCCGACTGC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262456.6
3UTR CAA 72 bp GCACTGATATATGAAAATAATGTTTGGGCGTTCCTATaGATGTGTAGGCTGGCTTCCCGGACTAGCACACGA +
Preference number: 4 (lower is better)
Translates to: ALIYENNVWAFL*MCRLASRTSTR
Trigger: TCGTGTGCTAGTCCGGGAAGCCAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACAAACAGCAGGTTCTCTaGCTTGTTCATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNKQQVL*LVHSLL
Trigger: AAGAAGACTATGAACAAGTCAGAGAACCTGCTGTTT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTTTTGGCTGAGTAGCTaGTTGCAGGTTATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLFWLSS*LQVIRK
Trigger: TTTTCTTATAACCTGCAATCAGCTACTCAGCCAAAA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAAATAGAGCCCTCCTGTaGGCTTGGCTTGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPNRALL*AWLVSL
Trigger: AAGTGACACAAGCCAAGCTCACAGGAGGGCTCTATT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATTCCTCTCCAGGATTTTaGCTTTCAAGTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNSSPGF*LSSSSH
Trigger: GTGGCTGGAACTTGAAAGTCAAAATCCTGGAGAGGA...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTATTCCCATCAGCAACTaGAAAGTGAAGAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPIPISN*KVKRSS
Trigger: CGAACTCCTCTTCACTTTGCAGTTGCTGATGGGAAT...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACATAAGACGTTATATTaGAGCTTTCATATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPHKTLY*SFHMRS
Trigger: TGACCTCATATGAAAGCTGCAATATAACGTCTTATG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGCATAAGACGTTATATTaGAGCTTTCATATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLHKTLY*SFHMRS
Trigger: TGACCTCATATGAAAGCTGCAATATAACGTCTTATG...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCACCATATGCTGCACACTaGAAAGGGGTTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPPYAAH*KGVLPA
Trigger: TGCAGGAAGAACCCCTTTGCAGTGTGCAGCATATGG...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCATTGAATGTTAGGGTCTaGATTGTTTTCCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLETRSQYQLAGRNPNPALNVRV*IVFHEN
Trigger: GTTCTCATGGAAAACAATGCAGACCCTAACATTCAA...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTTCTCAACTGTTCATaGTTCATGAGGAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: KSELCTSYASSPEHSLPPFLNCS*FMRRFF
Trigger: GAAAAATCTCCTCATGAAGCATGAACAGTTGAGAAA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAACTCCTGGAGATCCTCTaGTGTCTCTTGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLELLEIL*CLLAQG
Trigger: GCCCTGAGCCAAGAGACAGCAGAGGATCTCCAGGAG...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAATTGGGTTCTGTGTCATaGCGCCTGCTGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLELGSVS*RLLGFQ
Trigger: CTGGAAGCCCAGCAGGCGGCATGACACAGAACCCAA...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATGCTGATTGTTCTCAATaGCTTCTGGGCTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNADCSQ*LLGCKM
Trigger: CATCTTGCAGCCCAGAAGGCATTGAGAACAATCAGC...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp AGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGGGTTGTATTCTTTTGCATTATCTCCAAACTCTaGCTCAGTTTCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SFFSLVRLLLPVRVVFFCIISKL*LSFFSL
Trigger: CAGGCTGAAGAAACTGAGGCAGAGTTTGGAGATAAT...GCAAAAGAATACAACCCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGCTTGCATTCTTTCTCTaGAATTCCCTCCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMLAFFL*NSLLSR
Trigger: CCTGGAGAGGAGGGAATTGCAGAGAAAGAATGCAAG...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAACTTGTATGGCTGCGATaGACAGGGCACCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLELVWLR*TGHRAP
Trigger: TGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAG...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAACATGCTGCTCCTTCTaGAGGGCTCCGCCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLETCCSF*RAPPRD
Trigger: GTCTCTAGGCGGAGCCCTCCAGAAGGAGCAGCATGT...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAAACAGAGGGAACTCCTaGATGCCTGCTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPNRGNS*MPASIT
Trigger: AGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGGGTTGTATTCTTTTGCGGTGTTCTCCCAAACTaGTCTTCTTTGTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: SFFSLVRLLLPVRVVFFCGVLPN*SSLSLR
Trigger: TCTTAAAGACAAAGAAGATCAGTTTGGGAGAACACC...GCAAAAGAATACAACCCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR TCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGAACTGCCATGCAGTTaGTATAGCCTCCATATGCTG +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPELPCS*YSLHML
Trigger: CAGCATATGGAGGCTATATCAACTGCATGGCAGTTC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATGCCTTCATTGGGTCTaGAGTGGACACAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPCLHWV*SGHKQI
Trigger: AATCTGCTTGTGTCCACTTCAGACCCAATGAAGGCA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTTTTGGCTGAGTAGCTaGTTGCAGGTTATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RLSAENLNSALAMPAPPNFWLSS*LQVIRK
Trigger: TTTTCTTATAACCTGCAATCAGCTACTCAGCCAAAA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACCTTCAGAAGAGCATCTaGACAATCCAATCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNLQKSI*TIQSVS
Trigger: GCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAG...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAACCAATGTTAGAATCATaGTTGATGAGCAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEPMLES*LMSSFT
Trigger: TGTGAAGCTGCTCATCAAGCATGATTCTAACATTGG...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAACTGCCTTTGCCAGCTaGCCACATAAAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPTAFAS*PHKGCS
Trigger: AGAACATCCTTTATGTGGGCAGCTGGCAAAGGCAGT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTTTCTCAACTGTTCATaGTTCATGAGGAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: SRKSELCTSYASSPEHSLFLNCS*FMRRFF
Trigger: GAAAAATCTCCTCATGAAGCATGAACAGTTGAGAAA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATGCTTAAGCACTGAGTaGTTGGTGGACTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPCLSTE*LVDFVP
Trigger: AGGCACAAAGTCCACCAAGCACTCAGTGCTTAAGCA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGTGGAGGGCTGTTCTCTaGCTATGGTCAGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMWRAVL*LWSVLF
Trigger: GAATAAAACTGACCATAGCCAGAGAACAGCCCTCCA...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAAAAGGTGTGGCTCCTTaGCTGTCAGATGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPKGVAP*LSDGIV
Trigger: AACTATCCCATCTGACAGCCAAGGAGCCACACCTTT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAACAGGCTCGGAAAAGTaGAGTATGTTTCATAACATC +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTETGSEK*SMFHNI
Trigger: GATGTTATGAAACATACTCCACTTTTCCGAGCCTGT...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAAGAGAATGTCCATCTTaGTCAACTAGATCTACCCTT +
Preference number: 4 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTERECPS*STRSTL
Trigger: AAGGGTAGATCTAGTTGACCAAGATGGACATTCTCT...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATCATTGGGTCTGAAGTaGACACAAGCAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPSLGLK*TQADWP
Trigger: AGGCCAATCTGCTTGTGTCCACTTCAGACCCAATGA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp AGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGGGTTGTATTCTTTTGCACACTTCTGCATTCATaGATACCAGAATTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SFFSLVRLLLPVRVVFFCTLLHS*IPELSG
Trigger: CCCACTTAATTCTGGTATCCATGAATGCAGAAGTGT...GCAAAAGAATACAACCCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR TCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAGGCAACTTGTGGCCTTaGGAGGCTAACGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEGNLWP*EANVGT
Trigger: AGTTCCTACGTTAGCCTCTCAAGGCCACAAGTTGCC...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACAGTTTTATTCACATCTaGTCCTGCCTTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNSFIHI*SCLQKS
Trigger: GCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACT...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTGCCGGGTGGTCAAGTaGAAAGGAGTCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSCRVVK*KGVISS
Trigger: GGAAGAGATGACTCCTTTGCACTTGACCACCCGGCA...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCACAAGGTATCCATTGTTaGAGGACCAATGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPQGIHC*RTNAKL
Trigger: CAGCTTTGCATTGGTCCTGCAACAATGGATACCTTG...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTACTTTGTGCCTGAGGTaGCCTTGGATGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSTLCLR*PWMDSW
Trigger: CCAAGAGTCCATCCAAGGGCACCTCAGGCACAAAGT...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGGTCATAGGCGGTTGTaGATTGTGCATTTCATAGGA +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPGHRRL*IVHFIG
Trigger: TCCTATGAAATGCACAATGCACAACCGCCTATGACC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AGTTTCTTCAGCCTGGTAAGGCTGCTGCTTCCTGTTAGGGTTGTATTCTTTTGCCAAAGTAGCTTTAGTTaGCATATTAGTCCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: SFFSLVRLLLPVRVVFFCQSSFS*HISPPK
Trigger: TTTAGGGGGACTAATATGGCAACTAAAGCTACTTTG...GCAAAAGAATACAACCCTAACAGGAAGCAGCAGCCTTACCAGGCTGAAGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACTTAACGGCAGCAGCATaGACTTGTGATGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNLTAAA*TCDAND
Trigger: ATCATTAGCATCACAAGTCCATGCTGCTGCCGTTAA...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATGTATCCACTTCTCCTaGTGCCATAAACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPCIHFS*CHKLQQ
Trigger: CTGCTGAAGTTTATGGCACCAGGAGAAGTGGATACA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGAGAGGAAGGCTGCTATaGGACAGGCTTCCTATCTCA +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLRGRLL*DRLPIS
Trigger: TGAGATAGGAAGCCTGTCCCATAGCAGCCTTCCTCT...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTCATTCAGTGAAGACGTaGCGGCAACTTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSHSVKT*RQLVAL
Trigger: CAAGGCCACAAGTTGCCGCCACGTCTTCACTGAATG...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATAAACAGCAGGTTCTCTaGCTTGTTCATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNKQQVL*LVHSLL
Trigger: AAGAAGACTATGAACAAGTCAGAGAACCTGCTGTTT...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR TCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGAGACAGCTTGGATTTTaGAGGCGGCGATGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLRQLGF*RRRCLV
Trigger: TACAAGACATCGCCGCCTTCAAAATCCAAGCTGTCT...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAGTCTCCTTAGATACCTaGAAGTCCTCGGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEVSLDT*KSSDRV
Trigger: TACCCTGTCCGAGGACTTTCAGGTATCTAAGGAGAC...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGTTCCAAGGCCTAACATaGTGCCTGTTACATAATAGT +
Preference number: 4 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMFQGLT*CLLHNS
Trigger: ACTATTATGTAACAGGCATCATGTTAGGCCTTGGAA...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAAGTTTTATTCACATCTaGTCCTGCCTTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPSFIHI*SCLQKS
Trigger: GCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGGATATAGCCTCCATATaGTGCACACTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLDIASI*CTLQRG
Trigger: ACCCCTTTGCAGTGTGCAGCATATGGAGGCTATATC...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp AAGCAACTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACGCTGTTCTCTGGCTATaGTCAGTTTTATTCACATCT +
Preference number: 4 (lower is better)
Translates to: KQLKSRNHVVHLCVPRPNAVLWL*SVLFTS
Trigger: AGATGTGAATAAAACTGACCATAGCCAGAGAACAGC...GTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTAGAGCCCATCATCACTaGATTTTATTTAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: SASWSENTSRTLTPELAPRAHHH*ILFKPG
Trigger: ACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCT...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGGTGTTCTCCCAAACTaGTCTTCTTTGTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPGVLPN*SSLSLR
Trigger: TCTTAAAGACAAAGAAGATCAGTTTGGGAGAACACC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR TCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGCTTCCCTCTTTGTCTTaGATGTTAGGGTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLLPSLS*MLGSAL
Trigger: CAATGCAGACCCTAACATTCAAGACAAAGAGGGAAG...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCAACTGTACAGACTaGGGTGAAAGCAGACACTCA +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSSNCTD*GESRHS
Trigger: TGAGTGTCTGCTTTCACCTCAGTCTGTACAGTTGGA...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATCCATATGCTTTAAAATaGGAATGGATCCCCATACAA +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNPYALK*EWIPIQ
Trigger: TTGTATGGGGATCCATTCTCATTTTAAAGCATATGG...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR TCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATTCCTCTCTATTGGCCTaGACTATAATAGCAATCTAT +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNSSLLA*TIIAIY
Trigger: ATAGATTGCTATTATAGTTCAGGCCAATAGAGAGGA...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGAATAAAGCTGCCCAGTaGAGTGGGGTTCGAAATAAG +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLNKAAQ*SGVRNK
Trigger: CTTATTTCGAACCCCACTGCACTGGGCAGCTTTATT...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTATAGCCTCCATATGCTaGACACTGCAAAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSIASIC*TLQRGS
Trigger: AGAACCCCTTTGCAGTGTGCAGCATATGGAGGCTAT...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTCTCCGCCTTCCTTTTTaGTGTTCTGCCTCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSLRLPF*CSASFR
Trigger: ACGAAAAGAGGCAGAACAGCAAAAAGGAAGGCGGAG...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTGTTCTCTGGCTATaGTCAGTTTTATTCACATCT +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPAVLWL*SVLFTS
Trigger: AGATGTGAATAAAACTGACCATAGCCAGAGAACAGC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTTGGATCTTTATGGTTaGCTGCCCAGTGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSLDLYG*LPSEVG
Trigger: TCCCACTTCACTGGGCAGCCAACCATAAAGATCCAA...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGCTTCCTCTCGCTTTTTaGCAGCAGCATCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLLPLAF*QQHLFS
Trigger: TGAGAAAAGATGCTGCTGCCAAAAAGCGAGAGGAAG...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATGGGACAGACAATACTTaGAAAGGATATTTGATATCC +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNGTDNT*KGYLIS
Trigger: GGATATCAAATATCCTTTCCAAGTATTGTCTGTCCC...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATGATACCAGAATTAAGTaGGACAGACAATACTTGGAA +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNDTRIK*DRQYLE
Trigger: TTCCAAGTATTGTCTGTCCCACTTAATTCTGGTATC...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR TCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGATGCATCTCACTGTGTaGACAGCACTTGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLMHLTV*TALGSL
Trigger: TAAAGATCCAAGTGCTGTTCACACAGTGAGATGCAT...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATTGAATGTTAGGGTCTaGATTGTTTTCCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: PRCKRLSAENLNSALAMPLNVRV*IVFHEN
Trigger: GTTCTCATGGAAAACAATGCAGACCCTAACATTCAA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR GCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTCAAGGTATCCATTGTTaGAGGACCAATGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSQGIHC*RTNAKL
Trigger: CAGCTTTGCATTGGTCCTGCAACAATGGATACCTTG...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAACTGGATGACTGCTGCTaGCTTGTTCTTTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLELDDCC*LVLFAK
Trigger: TTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAG...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAAAATGCTGTAGACTCTTaGCTCCATCTGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLENAVDS*LHLSTS
Trigger: AGATGTGGACAGATGGAGGCAAGAGTCTACAGCATT...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTACCTCAACTCCTCTGTaGTCTGTGGCAAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSTSTPL*SVANVN
Trigger: ATTCACATTTGCCACAGAGCACAGAGGAGTTGAGGT...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATTTGTATCCAGATTCTTaGATTCTTTCTCTGCAATTC +
Preference number: 4 (lower is better)
Translates to: HREFVVQKPGTDREQILNLYPDS*ILSLQF
Trigger: GAATTGCAGAGAAAGAATGCAAGAATCTGGATACAA...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR GCA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGTTGAATGAACACTTCTaGCTCCATAATGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMLNEHF*LHNVSL
Trigger: AAGAGATACATTATGGAGGCAGAAGTGTTCATTCAA...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CCA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAATGGAGGGCTGTTCTCTaGCTATGGTCAGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEWRAVL*LWSVLF
Trigger: GAATAAAACTGACCATAGCCAGAGAACAGCCCTCCA...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGCCTTGCTTACTGCAGTaGTTTGGGGGAATTTTAGTT +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLPCLLQ*FGGILV
Trigger: AACTAAAATTCCCCCAAACCACTGCAGTAAGCAAGG...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR TCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTATTGCAGCTTTCATATaGGGTCAAGACATCAACCAC +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSIAAFI*GQDINH
Trigger: GTGGTTGATGTCTTGACCTCATATGAAAGCTGCAAT...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTCACGCAATACATAAGTaGTGTTCTCCCAAACTGATC +
Preference number: 4 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSHAIHK*CSPKLI
Trigger: GATCAGTTTGGGAGAACACCACTTATGTATTGCGTG...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGGCTGTTCTCTGGCTATaGTCAGTTTTATTCACATCT +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLAVLWL*SVLFTS
Trigger: AGATGTGAATAAAACTGACCATAGCCAGAGAACAGC...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR GCA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGAAGATTGCTCACTTCTaGAAGTTGGTCAGAAAATAC +
Preference number: 4 (lower is better)
Translates to: FALIYENNVWAFLLMCRLKIAHF*KLVRKY
Trigger: GTATTTTCTGACCAACTTGCAGAAGTGAGCAATCTT...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 90 bp CTCAGGCTATGTCAGCTTTCTAGGTTTCCTCGCCTCCTCCAGGACTaGCGTCCCGGGGGCGGCTCCAGGAGGCGCAACCCGGACCGGGCC +
Preference number: 5 (lower is better)
Translates to: LRLCQLSRFPRLLQD*RPGGGSRRRNPDRA
Trigger: GGCCCGGTCCGGGTTGCGCCTCCTGGAGCCGCCCCCGGGACGTCAGTCCTGGAGGAGGCGAGGAAACCTAGAAAGCTGACATAGCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480309.1
CDS GCA 90 bp GCTCCTTCTGGAGGGCTCCGCCTAGAGACCCTCCTGGAGATCCTCTaGTGTCTCTTGGCTCAGGGCCTTGGGCCACGTTGCCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: APSGGLRLETLLEIL*CLLAQGLGPRCQQE
Trigger: CTCCTGCTGGCAACGTGGCCCAAGGCCCTGAGCCAAGAGACAGCAGAGGATCTCCAGGAGGGTCTCTAGGCGGAGCCCTCCAGAAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 90 bp CATTTGGCCTTGGGTTCTGTGTCATGCCGCCTGCTGGGCTTCCAGTaGCTATCGTGCGGTGGAAGGCTTGCAGCTGCCCGCCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: HLALGSVSCRLLGFQ*LSCGGRLAAARLES
Trigger: GGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACACAGAACCCAAGGCCAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp TTGGGTTCTGTGTCATGCCGCCTGCTGGGCTTCCAGTGGCTATCGTaGGGTGGAAGGCTTGCAGCTGCCCGCCTGGAGTCCTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LGSVSCRLLGFQWLS*GGRLAAARLESSPF
Trigger: GAAAGGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACACAGAACCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 90 bp TTCTGTGTCATGCCGCCTGCTGGGCTTCCAGTGGCTATCGTGCGGTaGAAGGCTTGCAGCTGCCCGCCTGGAGTCCTCTCCTTTCTCATC +
Preference number: 5 (lower is better)
Translates to: FCVMPPAGLPVAIVR*KACSCPPGVLSFLI
Trigger: GATGAGAAAGGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCAGCAGGAGGCTGCTaGCTGGGGGCCCGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLPAGGC*LGARLC
Trigger: GCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTGG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 90 bp TCCTCTCCTTTCTCATCAGGCCCAGCCACCCTGATACAGGAGGGCTaGTTCACGAAGCCTTTCCCCTTTGCACACCGCTCATCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SSPFSSGPATLIQEG*FTKPFPFAHRSSPA
Trigger: AGCTGGCGATGAGCGGTGTGCAAAGGGGAAAGGCTTCGTGAAGCAGCCCTCCTGTATCAGGGTGGCTGGGCCTGATGAGAAAGGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACGTGCGGTGGAAGGCTaGCAGCTGCCCGCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPRAVEG*QLPAWS
Trigger: ACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp CAGGTGCTTCCTGAGCTGGTAGCTTCGCCAGGCGCGCTGGATGACTaGTGCTGCCTTGTTCTTTTTGCGAAACAGCTCCTTCCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: QVLPELVASPGALDD*CCLVLFAKQLLPPS
Trigger: CGAAGGAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAGCTACCAGCTCAGGAAGCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 90 bp AGCCACCCTGATACAGGAGGGCTGCTTCACGAAGCCTTTCCCCTTTaGACACCGCTCATCGCCAGCTGTCTCACCTCTGGACTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: SHPDTGGLLHEAFPL*TPLIASCLTSGLLN
Trigger: GTTGAGAAGTCCAGAGGTGAGACAGCTGGCGATGAGCGGTGTGCAAAGGGGAAAGGCTTCGTGAAGCAGCCCTCCTGTATCAGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCAGGGCCTTGGGCCACGTaGCCAGCAGGAGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAGPWAT*PAGGCL
Trigger: CAAGCAGCCTCCTGCTGGCAACGTGGCCCAAGGCCC...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGTGCCTGAGGTGCCCTaGGATGGACTCTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPVPEVP*DGLLGA
Trigger: GGCCCCCAAGAGTCCATCCAAGGGCACCTCAGGCAC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS TCA 90 bp TGCCCAGAGAGGGGACCAGGTGCTGGATCAGTCTCCTTAGATACCTaGAAGTCCTCGGACAGGGTAGATGTCTCCAGCCTCCTAGCTCCT +
Preference number: 5 (lower is better)
Translates to: CPERGPGAGSVSLDT*KSSDRVDVSSLLAP
Trigger: AGGAGCTAGGAGGCTGGAGACATCTACCCTGTCCGAGGACTTTCAGGTATCTAAGGAGACTGATCCAGCACCTGGTCCCCTCTCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp GTGCTTCCTGAGCTGGTAGCTTCGCCAGGCGCGCTGGATGACTGCTaGTGCCTTGTTCTTTTTGCGAAACAGCTCCTTCCTCCTTCGTTC +
Preference number: 5 (lower is better)
Translates to: VLPELVASPGALDDC*CLVLFAKQLLPPSF
Trigger: GAACGAAGGAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAGCTACCAGCTCAGGAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 90 bp AGCCTTTCCCCTTTGCACACCGCTCATCGCCAGCTGTCTCACCTCTaGACTTCTCAACAGAGGGAACTCCTGGATGCCTGCTTCCATCAC +
Preference number: 5 (lower is better)
Translates to: SLSPLHTAHRQLSHL*TSQQRELLDACFHH
Trigger: GTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGGTGAGACAGCTGGCGATGAGCGGTGTGCAAAGGGGAAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGAAGGCGGCGATGTCTaGTATGGCTGCGATGGACAG +
Preference number: 5 (lower is better)
Translates to: LNSALAMPAPPNTVFLHREGGDV*YGCDGQ
Trigger: CTGTCCATCGCAGCCATACAAGACATCGCCGCCTTC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 90 bp CTTCCTGAGCTGGTAGCTTCGCCAGGCGCGCTGGATGACTGCTGCTaGCTTGTTCTTTTTGCGAAACAGCTCCTTCCTCCTTCGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LPELVASPGALDDCC*LVLFAKQLLPPSFS
Trigger: AGAGAACGAAGGAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAGCTACCAGCTCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCGAAGCCTTTCCCCTTaGCACACCGCTCATCGCCAG +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHRSLSP*HTAHRQ
Trigger: CTGGCGATGAGCGGTGTGCAAAGGGGAAAGGCTTCG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp TTGAAGGCGGCGATGTCTTGTATGGCTGCGATGGACAGGGCACCGTaGTCCAACATGAACTGGATCACTTCATGGCGCTCACCAAGCAAA +
Preference number: 5 (lower is better)
Translates to: LKAAMSCMAAMDRAP*SNMNWITSWRSPSK
Trigger: TTTGCTTGGTGAGCGCCATGAAGTGATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCGCCGCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 90 bp TTTGGCCTTCTGGAGTTTGTTCCCTGCAAATCTGAGGAAACATGCTaGTCCTTCTGGAGGGCTCCGCCTAGAGACCCTCCTGGAGATCCT +
Preference number: 5 (lower is better)
Translates to: FGLLEFVPCKSEETC*SFWRAPPRDPPGDP
Trigger: AGGATCTCCAGGAGGGTCTCTAGGCGGAGCCCTCCAGAAGGAGCAGCATGTTTCCTCAGATTTGCAGGGAACAAACTCCAGAAGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 90 bp GGGGAGAAGGTCAATATTCACACTCTGCCCAGAGAGGGGACCAGGTaGTGGATCAGTCTCCTTAGATACCTGAAAGTCCTCGGACAGGGT +
Preference number: 5 (lower is better)
Translates to: GEKVNIHTLPREGTR*WISLLRYLKVLGQG
Trigger: ACCCTGTCCGAGGACTTTCAGGTATCTAAGGAGACTGATCCAGCACCTGGTCCCCTCTCTGGGCAGAGTGTGAATATTGACCTTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp ATCTGCAGTCGGAGCTCTACGGGGAGAAGGTCAATATTCACACTCTaGCCAGAGAGGGGACCAGGTGCTGGATCAGTCTCCTTAGATACC +
Preference number: 5 (lower is better)
Translates to: ICSRSSTGRRSIFTL*PERGPGAGSVSLDT
Trigger: GGTATCTAAGGAGACTGATCCAGCACCTGGTCCCCTCTCTGGGCAGAGTGTGAATATTGACCTTCTCCCCGTAGAGCTCCGACTGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 90 bp ATCGCCAGCTGTCTCACCTCTGGACTTCTCAACAGAGGGAACTCCTaGATGCCTGCTTCCATCACTGCCTTCATTGGGTCTGAAGTGGAC +
Preference number: 5 (lower is better)
Translates to: IASCLTSGLLNRGNS*MPASITAFIGSEVD
Trigger: GTCCACTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGGTGAGACAGCTGGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGAAGGCGGCGATGTCTaGTATGGCTGCGATGGACAG +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPEGGDV*YGCDGQ
Trigger: CTGTCCATCGCAGCCATACAAGACATCGCCGCCTTC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCACCAGCAGGAGGCTGCTaGCTGGGGGCCCGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPPAGGC*LGARLC
Trigger: GCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTGG...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGGGGCACATTTGGCCTaGGGTTCTGTGTCATGCCGC +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLGAHLA*GSVSCR
Trigger: GCGGCATGACACAGAACCCAAGGCCAAATGTGCCCC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp TCATTTGGCCTTCTGGAGTTTGTTCCCTGCAAATCTGAGGAAACATaGTGCTCCTTCTGGAGGGCTCCGCCTAGAGACCCTCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: SFGLLEFVPCKSEET*CSFWRAPPRDPPGD
Trigger: ATCTCCAGGAGGGTCTCTAGGCGGAGCCCTCCAGAAGGAGCAGCATGTTTCCTCAGATTTGCAGGGAACAAACTCCAGAAGGCCAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 90 bp TGCAGTCGGAGCTCTCTGGACTTCTCAACAGAGGGAACTCCTGGATaGCTGCTTCCATCACTGCCTTCATTGGGTCTGAAGTGGACACAA +
Preference number: 5 (lower is better)
Translates to: CSRSSLDFSTEGTPG*LLPSLPSLGLKWTQ
Trigger: TTGTGTCCACTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGAGCTCCGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262456.6
CDS GCA 90 bp CCAGCTGTCTCACCTCTGGACTTCTCAACAGAGGGAACTCCTGGATaGCTGCTTCCATCACTGCCTTCATTGGGTCTGAAGTGGACACAA +
Preference number: 5 (lower is better)
Translates to: PAVSPLDFSTEGTPG*LLPSLPSLGLKWTQ
Trigger: TTGTGTCCACTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGGTGAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 90 bp TATCTGCAGTCGGAGCTCTCTGGACTTCTCAACAGAGGGAACTCCTaGATGCCTGCTTCCATCACTGCCTTCATTGGGTCTGAAGTGGAC +
Preference number: 5 (lower is better)
Translates to: YLQSELSGLLNRGNS*MPASITAFIGSEVD
Trigger: GTCCACTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGAGCTCCGACTGCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262456.6
CDS-3UTR CAA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGACATCATCACTGCCTTaGCCAGCTGCCCACATAAAG +
Preference number: 5 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRTSSLP*PAAHIK
Trigger: CTTTATGTGGGCAGCTGGCAAAGGCAGTGATGATGT...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTTCTTGGCTCAGGGCCTaGGGCCACGTTGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SASWSENTSRTLTPELAPSWLRA*GHVASR
Trigger: CCTGCTGGCAACGTGGCCCAAGGCCCTGAGCCAAGA...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTGTGCCTGAGGTGCCCTaGGATGGACTCTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SASWSENTSRTLTPELAPVPEVP*DGLLGA
Trigger: GGCCCCCAAGAGTCCATCCAAGGGCACCTCAGGCAC...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTTAAGCACTGAGTGCTaGGTGGACTTTGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRLSTEC*VDFVPE
Trigger: CTCAGGCACAAAGTCCACCAAGCACTCAGTGCTTAA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGGTGTCACTTTGTTTCTaGGTGTACGATGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRVSLCF*VYDGGE
Trigger: CTCCCCACCATCGTACACCAAGAAACAAAGTGACAC...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp ATCCTGTGTATCCACTTCTCCTGGTGCCATAAACTTCAGCAGAAGTaGCAAACACTTAGGGCTCCTGTGCCGGGTGGTCAAGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: ILCIHFSWCHKLQQK*QTLRAPVPGGQVQR
Trigger: CCTTTGCACTTGACCACCCGGCACAGGAGCCCTAAGTGTTTGGCACTTCTGCTGAAGTTTATGGCACCAGGAGAAGTGGATACACAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
ENST00000496467.5
CDS GCA 90 bp TCCAGTTCCTTCCTCCAAACCTGGAGGAGCAATGCTGTAGACTCTTaGCTCCATCTGTCCACATCTCCAGCTCCAAGCTGCTTCATATGC +
Preference number: 5 (lower is better)
Translates to: SSSFLQTWRSNAVDS*LHLSTSPAPSCFIC
Trigger: GCATATGAAGCAGCTTGGAGCTGGAGATGTGGACAGATGGAGGCAAGAGTCTACAGCATTGCTCCTCCAGGTTTGGAGGAAGGAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCAAAGGTGTGGCTCCTaGGCTGTCAGATGGGATAGT +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHQRCGS*AVRWDS
Trigger: ACTATCCCATCTGACAGCCAAGGAGCCACACCTTTG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGGGCCTTGGGCCACGTaGCCAGCAGGAGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPGPWAT*PAGGCL
Trigger: CAAGCAGCCTCCTGCTGGCAACGTGGCCCAAGGCCC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACGGACTCTTGGGGGCCTaGCTTACTGCAGTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: RLSAENLNSALAMPAPPNGLLGA*LTAVVW
Trigger: CCAAACCACTGCAGTAAGCAAGGCCCCCAAGAGTCC...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCCCTTGGATGGACTCTaGGGGGCCTTGCTTACTGCA +
Preference number: 5 (lower is better)
Translates to: RLSAENLNSALAMPAPPNPLDGL*GALLTA
Trigger: TGCAGTAAGCAAGGCCCCCAAGAGTCCATCCAAGGG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACAGTGCTTGGTGGACTTaGTGCCTGAGGTGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: RLSAENLNSALAMPAPPNSAWWT*CLRCPW
Trigger: CCAAGGGCACCTCAGGCACAAAGTCCACCAAGCACT...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACTCCTCCTCTGAGCTCTaGAGTGCGCCTTTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: RLSAENLNSALAMPAPPNSSSEL*SAPFLG
Trigger: CCCCAGAAAAGGCGCACTCAAGAGCTCAGAGGAGGA...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 90 bp CGATGTCTTGTATGGCTGCGATGGACAGGGCACCGTGCTCCAACATaGACTGGATCACTTCATGGCGCTCACCAAGCAAAGCATAATCAA +
Preference number: 5 (lower is better)
Translates to: RCLVWLRWTGHRAPT*TGSLHGAHQAKHNQ
Trigger: TTGATTATGCTTTGCTTGGTGAGCGCCATGAAGTGATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 90 bp TTTGTAGACAGCTTGGATTTTGAAGGCGGCGATGTCTTGTATGGCTaGGATGGACAGGGCACCGTGCTCCAACATGAACTGGATCACTTC +
Preference number: 5 (lower is better)
Translates to: FVDSLDFEGGDVLYG*DGQGTVLQHELDHF
Trigger: GAAGTGATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCGCCGCCTTCAAAATCCAAGCTGTCTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGACATCATCACTGCCTTaGCCAGCTGCCCACATAAAG +
Preference number: 5 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLTSSLP*PAAHIK
Trigger: CTTTATGTGGGCAGCTGGCAAAGGCAGTGATGATGT...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGTCAAGGTATCCATTGTaGCAGGACCAATGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRSRYPL*QDQCKA
Trigger: AGCTTTGCATTGGTCCTGCAACAATGGATACCTTGA...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGCTCCGCCTTCCTTTTaGCTGTTCTGCCTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLAPPSF*LFCLFS
Trigger: CGAAAAGAGGCAGAACAGCAAAAAGGAAGGCGGAGC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATCTTGGCTCAGGGCCTaGGGCCACGTTGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPSWLRA*GHVASR
Trigger: CCTGCTGGCAACGTGGCCCAAGGCCCTGAGCCAAGA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCCATCACTGCCTTCATaGGGTCTGAAGTGGACACAA +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHPSLPS*GLKWTQ
Trigger: TTGTGTCCACTTCAGACCCAATGAAGGCAGTGATGG...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGCTGCCTTGTTCTTTTaGCGAAACAGCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPAALFF*RNSSFL
Trigger: GAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAACCCTTGGATGGACTCTaGGGGGCCTTGCTTACTGCA +
Preference number: 5 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEPLDGL*GALLTA
Trigger: TGCAGTAAGCAAGGCCCCCAAGAGTCCATCCAAGGG...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAAAGTGCTTGGTGGACTTaGTGCCTGAGGTGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTESAWWT*CLRCPW
Trigger: CCAAGGGCACCTCAGGCACAAAGTCCACCAAGCACT...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 90 bp TCAACTCCTCTGTGCTCTGTGGCAAATGTGAATAGAGCCCTCCTGTaGGCTTGGCTTGTGTCACTTTGTTTCTTGGTGTACGATGGTGGG +
Preference number: 5 (lower is better)
Translates to: STPLCSVANVNRALL*AWLVSLCFLVYDGG
Trigger: CCCACCATCGTACACCAAGAAACAAAGTGACACAAGCCAAGCTCACAGGAGGGCTCTATTCACATTTGCCACAGAGCACAGAGGAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 90 bp TGTTGGAGCAGCATCCAGAATGCATCTCACTGTGTGAACAGCACTTaGATCTTTATGGTTGGCTGCCCAGTGAAGTGGGATCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: CWSSIQNASHCVNST*IFMVGCPVKWDLAF
Trigger: GAAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGATGCATTCTGGATGCTGCTCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS CCA 90 bp GCAGTGGTTTGGGGGAATTTTAGTTCCAGTTCCTTCCTCCAAACCTaGAGGAGCAATGCTGTAGACTCTTGCCTCCATCTGTCCACATCT +
Preference number: 5 (lower is better)
Translates to: AVVWGNFSSSSFLQT*RSNAVDSCLHLSTS
Trigger: AGATGTGGACAGATGGAGGCAAGAGTCTACAGCATTGCTCCTCCAGGTTTGGAGGAAGGAACTGGAACTAAAATTCCCCCAAACCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 90 bp TGGCCACCTTCAGAAAGGGTTCATTTCATCCTTGTAGCCTCCTTCTaGGCTGCAAGATGGAGGGCTGTTCTCTGGCTATGGTCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: WPPSERVHFILVASF*AARWRAVLWLWSVL
Trigger: TAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGGAGGCTACAAGGATGAAATGAACCCTTTCTGAAGGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496467.5
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTCTTCCAGATCCTTTaGCATCCAGTTTGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLFQIL*HPVCSA
Trigger: CGCAGAGCAAACTGGATGCAAAAGGATCTGGAAGAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGGCCAATGCAGAGCTGTTaGCTTGTTTTTATCCTGTGT +
Preference number: 5 (lower is better)
Translates to: LNSALAMPAPPNTVFLHRPMQSC*LVFILC
Trigger: ACACAGGATAAAAACAAGCAAACAGCTCTGCATTGG...CCTATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCACTGTGTGAACAGCACTaGGATCTTTATGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPLCEQH*DLYGWL
Trigger: CAGCCAACCATAAAGATCCAAGTGCTGTTCACACAG...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCAGTAAAGACTCTGTaGGAGCAGCATCCAGAATGC +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPSVKTL*EQHPEC
Trigger: GCATTCTGGATGCTGCTCCAACAGAGTCTTTACTGA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCACCCTTTGTAGACAGCTaGGATTTTGAAGGCGGCGAT +
Preference number: 5 (lower is better)
Translates to: SLETRSQYQLAGRNPNPAPFVDS*DFEGGD
Trigger: ATCGCCGCCTTCAAAATCCAAGCTGTCTACAAAGGG...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATCTTCCTCTCGCTTTTaGGCAGCAGCATCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPSSSRF*AAASFL
Trigger: GAGAAAAGATGCTGCTGCCAAAAAGCGAGAGGAAGA...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTTGGCCTTCTGGAGTTaGTTCCCTGCAAATCTGAGG +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLAFWS*FPANLR
Trigger: CCTCAGATTTGCAGGGAACAAACTCCAGAAGGCCAA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCATCACTGCCTTCATaGGGTCTGAAGTGGACACAA +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLPSLPS*GLKWTQ
Trigger: TTGTGTCCACTTCAGACCCAATGAAGGCAGTGATGG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTGCTGCCTTGTTCTTTTaGCGAAACAGCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLAALFF*RNSSFL
Trigger: GAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGC...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTTAAGCACTGAGTGCTaGGTGGACTTTGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLSTEC*VDFVPE
Trigger: CTCAGGCACAAAGTCCACCAAGCACTCAGTGCTTAA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTGTATACACTGTAGGTaGCTCACTGAGTTGAGACGC +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHCIHCR*LTELRR
Trigger: GCGTCTCAACTCAGTGAGCAACCTACAGTGTATACA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTAGCCCTCCTGTGAGCTaGGCTTGTGTCACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLSPPVS*ACVTLF
Trigger: AAACAAAGTGACACAAGCCAAGCTCACAGGAGGGCT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 90 bp GCCTTGTTCTTTTTGCGAAACAGCTCCTTCCTCCTTCGTTCTCTCTaGATTATCTGCAGTCGGAGCTCTCTGGACTTCTCAACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: ALFFLRNSSFLLRSL*IICSRSSLDFSTEG
Trigger: TCCCTCTGTTGAGAAGTCCAGAGAGCTCCGACTGCAGATAATTCAGAGAGAACGAAGGAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262456.6
CDS TCA 90 bp TCAGCTCCAGTTAATTGCTGCCATGAGGGTAGGCAAGTCCTTTTCTaGTTTCACCAAAAAGCAGGTCACGCCAATCGCTGTTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SAPVNCCHEGRQVLF*FHQKAGHANRCYSW
Trigger: CCAGGAGTAACAGCGATTGGCGTGACCTGCTTTTTGGTGAAATCAGAAAAGGACTTGCCTACCCTCATGGCAGCAATTAACTGGAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480309.1
CDS GCA 90 bp GAGGGCTGTTCTCTGGCTATGGTCAGTTTTATTCACATCTGCTCCTaGCTTCAGAAGAGCATCTGCACAATCCAATCTGTCAGCCAACAC +
Preference number: 5 (lower is better)
Translates to: EGCSLAMVSFIHICS*LQKSICTIQSVSQH
Trigger: GTGTTGGCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACTGACCATAGCCAGAGAACAGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000460636.2
ENST00000466647.5
ENST00000496467.5
CDS GCA 90 bp CTCTTAGATCCTGCCTGTGCTGATTGTTCTCAATGCCTTCTGGGCTaGAAGATGGAGGGCTGTTCTCTGGCTATGGTCAGTTTTATTCAC +
Preference number: 5 (lower is better)
Translates to: LLDPACADCSQCLLG*KMEGCSLAMVSFIH
Trigger: GTGAATAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGGCATTGAGAACAATCAGCACAGGCAGGATCTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS CCA 90 bp CCAGAATGCATCTCACTGTGTGAACAGCACTTGGATCTTTATGGTTaGCTGCCCAGTGAAGTGGGATCTTGCCTTCAACATCAGGAATCC +
Preference number: 5 (lower is better)
Translates to: PECISLCEQHLDLYG*LPSEVGSCLQHQES
Trigger: GGATTCCTGATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGATGCATTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS CCA 90 bp ATCCTGCCTGTGCTGATTGTTCTCAATGCCTTCTGGGCTGCAAGATaGAGGGCTGTTCTCTGGCTATGGTCAGTTTTATTCACATCTGCT +
Preference number: 5 (lower is better)
Translates to: ILPVLIVLNAFWAAR*RAVLWLWSVLFTSA
Trigger: AGCAGATGTGAATAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGGCATTGAGAACAATCAGCACAGGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTGTGTGAACAGCACTaGGATCTTTATGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLCEQH*DLYGWL
Trigger: CAGCCAACCATAAAGATCCAAGTGCTGTTCACACAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATATGTTAGGGTCTGCATaGTTTTCCATGAGAACTGCC +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHMLGSA*FSMRTA
Trigger: GGCAGTTCTCATGGAAAACAATGCAGACCCTAACAT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAGCATCAAGGTATCCATaGTTGCAGGACCAATGCAAA +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPASRYP*LQDQCK
Trigger: TTTGCATTGGTCCTGCAACAATGGATACCTTGATGC...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACCCCTTTGTAGACAGCTaGGATTTTGAAGGCGGCGAT +
Preference number: 5 (lower is better)
Translates to: RLSAENLNSALAMPAPPNPFVDS*DFEGGD
Trigger: ATCGCCGCCTTCAAAATCCAAGCTGTCTACAAAGGG...GTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTCTTCCTCTCGCTTTTaGGCAGCAGCATCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLSSSRF*AAASFL
Trigger: GAGAAAAGATGCTGCTGCCAAAAAGCGAGAGGAAGA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCTCTGGCTGTTTCATTaGGCCTTCTGGAGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLLWLFH*AFWSLF
Trigger: GAACAAACTCCAGAAGGCCAAATGAAACAGCCAGAG...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGTGGACACAAGCAGATaGGCCTTTAGAATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHVDTSR*AFRMFS
Trigger: AGAGAACATTCTAAAGGCCAATCTGCTTGTGTCCAC...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTATGACTGCTGCTGCCTaGTTCTTTTTGCGAAACAGC +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLMTAAA*FFLRNS
Trigger: GCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCAT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTCCTGTGAGCTTGGCTaGTGTCACTTTGTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLSCELG*CHFVSW
Trigger: CCAAGAAACAAAGTGACACAAGCCAAGCTCACAGGA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp TCTCTTGAAACAAGAAGCCAGTACCAGCTAGCTGGCAGAAATCCCAACCCAGCAAGACACTCAGGCACTTaGCACAGACATAGTCTATGC +
Preference number: 5 (lower is better)
Translates to: SLETRSQYQLAGRNPNPARHSGT*HRHSLC
Trigger: GCATAGACTATGTCTGTGCAAAGTGCCTGAGTGTCT...TGCTGGGTTGGGATTTCTGCCAGCTAGCTGGTACTGGCTTCTTGTTTCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp CACTCAGGCACTTTGCACAGACATAGTCTATGCAGGTCCTTTCAGTGCAGGCTGAATACAAGTAGAACGTaGACGCCTGAGTTAGCACCT +
Preference number: 5 (lower is better)
Translates to: HSGTLHRHSLCRSFQCRLNTSRT*TPELAP
Trigger: AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATT...CAGCCTGCACTGAAAGGACCTGCATAGACTATGTCTGTGCAAAGTGCCTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 90 bp GCCTTGTTCTTTTTGCGAAACAGCTCCTTCCTCCTTCGTTCTCTCTaGATTATCTGCAGTCGGAGCTCTACGGGGAGAAGGTCAATATTC +
Preference number: 5 (lower is better)
Translates to: ALFFLRNSSFLLRSL*IICSRSSTGRRSIF
Trigger: GAATATTGACCTTCTCCCCGTAGAGCTCCGACTGCAGATAATTCAGAGAGAACGAAGGAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp AAGATGGAGGGCTGTTCTCTGGCTATGGTCAGTTTTATTCACATCTaGTCCTGCCTTCAGAAGAGCATCTGCACAATCCAATCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: KMEGCSLAMVSFIHI*SCLQKSICTIQSVS
Trigger: GCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000460636.2
ENST00000466647.5
ENST00000496467.5
CDS GCA 90 bp ACCTTCAGAAAGGGTTCATTTCATCCTTGTAGCCTCCTTCTGGGCTaGAAGATGGAGGGCTGTTCTCTGGCTATGGTCAGTTTTATTCAC +
Preference number: 5 (lower is better)
Translates to: TFRKGSFHPCSLLLG*KMEGCSLAMVSFIH
Trigger: GTGAATAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGGAGGCTACAAGGATGAAATGAACCCTTTCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496467.5
CDS CCA 90 bp ATGAGCCTCTGTAGAGCACCCTTATCTCCATTAACGGCAGCAGCATaGACTTGTGATGCTAATGATGAACCAGCAAACAGCAGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: MSLCRAPLSPLTAAA*TCDANDEPANSRFS
Trigger: AGAGAACCTGCTGTTTGCTGGTTCATCATTAGCATCACAAGTCCATGCTGCTGCCGTTAATGGAGATAAGGGTGCTCTACAGAGGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000466647.5
ENST00000496467.5
CDS CCA 90 bp CTTCCATCACTGCCTTCATTGGGTCTGAAGTGGACACAAGCAGATTaGCCTTTAGAATGTTCTCTGGCTGTTTCATTTGGCCTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: LPSLPSLGLKWTQAD*PLECSLAVSFGLLE
Trigger: CTCCAGAAGGCCAAATGAAACAGCCAGAGAACATTCTAAAGGCCAATCTGCTTGTGTCCACTTCAGACCCAATGAAGGCAGTGATGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATAGCAGGTTCTCTGACTaGTTCATAGTCTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHSRFSD*FIVFLA
Trigger: TGCTAAGAAGACTATGAACAAGTCAGAGAACCTGCT...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATTGCAGAGCTGTTTGCTaGTTTTTATCCTGTGTATCC +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHCRAVC*FLSCVS
Trigger: GGATACACAGGATAAAAACAAGCAAACAGCTCTGCA...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCAATGTTAGAATCATGCTaGATGAGCAGCTTCACATGC +
Preference number: 5 (lower is better)
Translates to: KSELCTSYASSPEHSLPPMLESC*MSSFTC
Trigger: GCATGTGAAGCTGCTCATCAAGCATGATTCTAACAT...TGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTATGTTAGGGTCTGCATaGTTTTCCATGAGAACTGCC +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLMLGSA*FSMRTA
Trigger: GGCAGTTCTCATGGAAAACAATGCAGACCCTAACAT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTTCAGTGCAGGCTGTGTaGATTGACAAAACAATGCTG +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLSVQAV*IDKTML
Trigger: CAGCATTGTTTTGTCAATCAACACAGCCTGCACTGA...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp AATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTCCTCCATGGCATTTTAAGAAGATaGCTCACTTCTGCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: NLNSALAMPAPPNTVFLHGILRR*LTSASW
Trigger: CCAACTTGCAGAAGTGAGCAATCTTCTTAAAATGCC...ATGGAGGAAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp TCTGCAAGTTGGTCAGAAAATACAAGTAGAACGTTGACGCCTGAGTTAGCACCTGTTTGGGCGTTCCTATaGATGTGTAGGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SASWSENTSRTLTPELAPVWAFL*MCRLAS
Trigger: GGAAGCCAGCCTACACATCAATAGGAACGCCCAAAC...AGGTGCTAACTCAGGCGTCAACGTTCTACTTGTATTTTCTGACCAACTTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp AATGCATCTCACTGTGTGAACAGCACTTGGATCTTTATGGTTGGCTaGCCAGTGAAGTGGGATCTTGCCTTCAACATCAGGAATCCCAAT +
Preference number: 5 (lower is better)
Translates to: NASHCVNSTWIFMVG*PVKWDLAFNIRNPN
Trigger: ATTGGGATTCCTGATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS GCA 90 bp GTTTTCCATGAGAACTGCCATGCAGTTGATATAGCCTCCATATGCTaGACACTGCAAAGGGGTTCTTCCTGCATAATCCTGGACATTTGG +
Preference number: 5 (lower is better)
Translates to: VFHENCHAVDIASIC*TLQRGSSCIILDIW
Trigger: CCAAATGTCCAGGATTATGCAGGAAGAACCCCTTTGCAGTGTGCAGCATATGGAGGCTATATCAACTGCATGGCAGTTCTCATGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp AGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCCCCGAACACAGTCTTACTGTAATACGGCTGTaGGTATTCAGCACTGAGAAA +
Preference number: 5 (lower is better)
Translates to: SRKSELCTSYASSPEHSLTVIRL*VFSTEK
Trigger: TTTCTCAGTGCTGAATACCAACAGCCGTATTACAGT...AAGACTGTGTTCGGGGGAGCTGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 90 bp TTTCATGAAACGATAATTTCCCTCCTCCTGGTCCACACTCCTGTATaGAGCAGTTTGCTTACTAACTGTGGCCACCTTCAGAAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: FHETIISLLLVHTPV*SSLLTNCGHLQKGF
Trigger: GAACCCTTTCTGAAGGTGGCCACAGTTAGTAAGCAAACTGCTTCATACAGGAGTGTGGACCAGGAGGAGGGAAATTATCGTTTCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460636.2
ENST00000466647.5
ENST00000496467.5
CDS CCA 90 bp TGTGTGAACAGCACTTGGATCTTTATGGTTGGCTGCCCAGTGAAGTaGGATCTTGCCTTCAACATCAGGAATCCCAATGTTAGAATCATG +
Preference number: 5 (lower is better)
Translates to: CVNSTWIFMVGCPVK*DLAFNIRNPNVRIM
Trigger: CATGATTCTAACATTGGGATTCCTGATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS CCA 90 bp GAAAAGGCGAAGTTATATCTACTGGAATGGGACACATTAACTATGTaGCCAAAGAAGGAAAGCAACAACTTCAGCCCCTTCTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: EKAKLYLLEWDTLTM*PKKESNNFSPFWAA
Trigger: TGCAGCCCAGAAGGGGCTGAAGTTGTTGCTTTCCTTCTTTGGCCACATAGTTAATGTGTCCCATTCCAGTAGATATAACTTCGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466647.5
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAGCTCCGCCTTCCTTTTaGCTGTTCTGCCTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPAPPSF*LFCLFS
Trigger: CGAAAAGAGGCAGAACAGCAAAAAGGAAGGCGGAGC...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGGGACTCTTGGGGGCCTaGCTTACTGCAGTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: FALIYENNVWAFLLMCRLGLLGA*LTAVVW
Trigger: CCAAACCACTGCAGTAAGCAAGGCCCCCAAGAGTCC...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 90 bp ATGGTCAGTTTTATTCACATCTGCTCCTGCCTTCAGAAGAGCATCTaGACAATCCAATCTGTCAGCCAACACGCAATACATAAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: MVSFIHICSCLQKSI*TIQSVSQHAIHKWC
Trigger: ACACCACTTATGTATTGCGTGTTGGCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACTGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000460636.2
ENST00000466647.5
ENST00000496467.5
CDS GCA 90 bp CTCTTTGTCTTGAATGTTAGGGTCTGCATTGTTTTCCATGAGAACTaGCATGCAGTTGATATAGCCTCCATATGCTGCACACTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: LFVLNVRVCIVFHEN*HAVDIASICCTLQR
Trigger: CCTTTGCAGTGTGCAGCATATGGAGGCTATATCAACTGCATGGCAGTTCTCATGGAAAACAATGCAGACCCTAACATTCAAGACAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCACTCTTCCAGATCCTTTaGCATCCAGTTTGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPLFQIL*HPVCSA
Trigger: CGCAGAGCAAACTGGATGCAAAAGGATCTGGAAGAG...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAACCAATGCAGAGCTGTTaGCTTGTTTTTATCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTEPMQSC*LVFILC
Trigger: ACACAGGATAAAAACAAGCAAACAGCTCTGCATTGG...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp GGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTCCCTGCCAACAGAATCTTCCCTCTTTGTCTaGAATGTTAGGGTCTGCATT +
Preference number: 5 (lower is better)
Translates to: GVLRMLGCVPFHSSLPTESSLFV*NVRVCI
Trigger: AATGCAGACCCTAACATTCAAGACAAAGAGGGAAGA...TTCTGTTGGCAGGGAAGAATGAAACGGCACACATCCTAGCATTCTAAGAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATCAGTAAAGACTCTGTaGGAGCAGCATCCAGAATGC +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPSVKTL*EQHPEC
Trigger: GCATTCTGGATGCTGCTCCAACAGAGTCTTTACTGA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 90 bp GAAAAGGCGAAGTTATATCTACTGGAATGGGACACATTAACTATGTaGCCAAAGAAGGAAAGCAACAACTTCAGCCCCTGGTATAAGTGT +
Preference number: 5 (lower is better)
Translates to: EKAKLYLLEWDTLTM*PKKESNNFSPWYKC
Trigger: ACACTTATACCAGGGGCTGAAGTTGTTGCTTTCCTTCTTTGGCCACATAGTTAATGTGTCCCATTCCAGTAGATATAACTTCGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460636.2
CDS-3UTR CAA 90 bp CATAGGGAGTTCGTAGTACAAAAGCCTGGAACTGACAGAGAGCAGATACTAAATAGCAGGTTCTCTGACTaGTTCATAGTCTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: HREFVVQKPGTDREQILNSRFSD*FIVFLA
Trigger: TGCTAAGAAGACTATGAACAAGTCAGAGAACCTGCT...ATTTAGTATCTGCTCTCTGTCAGTTCCAGGCTTTTGTACTACGAACTCCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CAA 90 bp AATGTGAAAGAGCCCATCATCACTGGATTTTATTTAAACCAGGTGTTCTTAGAACAAAGGTGTGGCTCCTaGGCTGTCAGATGGGATAGT +
Preference number: 5 (lower is better)
Translates to: NVKEPIITGFYLNQVFLEQRCGS*AVRWDS
Trigger: ACTATCCCATCTGACAGCCAAGGAGCCACACCTTTG...TTCTAAGAACACCTGGTTTAAATAAAATCCAGTGATGATGGGCTCTTTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCAAGCAGGTTCTCTGACTaGTTCATAGTCTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPSRFSD*FIVFLA
Trigger: TGCTAAGAAGACTATGAACAAGTCAGAGAACCTGCT...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp CCAAGGTGTAAAAGATTATCAGCAGAAAATCTGAACTCTGCACTAGCTATGCCATCTTCCCTCTTTGTCTaGAATGTTAGGGTCTGCATT +
Preference number: 5 (lower is better)
Translates to: PRCKRLSAENLNSALAMPSSLFV*NVRVCI
Trigger: AATGCAGACCCTAACATTCAAGACAAAGAGGGAAGA...TGGCATAGCTAGTGCAGAGTTCAGATTTTCTGCTGATAATCTTTTACACCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTTGGCCTTCTGGAGTTaGTTCCCTGCAAATCTGAGG +
Preference number: 5 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSLAFWS*FPANLR
Trigger: CCTCAGATTTGCAGGGAACAAACTCCAGAAGGCCAA...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGTGTATACACTGTAGGTaGCTCACTGAGTTGAGACGC +
Preference number: 5 (lower is better)
Translates to: FALIYENNVWAFLLMCRLCIHCR*LTELRR
Trigger: GCGTCTCAACTCAGTGAGCAACCTACAGTGTATACA...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGCTAGTCTCCCAGCTGTaGTTTAATACTAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMLVSQL*FNTRFL
Trigger: AAGAAACCTAGTATTAAACAACAGCTGGGAGACTAG...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS-3UTR CAA 90 bp CTTAAGAGCAGGAATCATGTTGTTCACCTTTGTGTTCCAAGGCCTAACATGATGTTTAACAAACGCTTGTaGAATGAACACTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LKSRNHVVHLCVPRPNMMFNKRL*NEHFCL
Trigger: GAGGCAGAAGTGTTCATTCAACAAGCGTTTGTTAAA...CATCATGTTAGGCCTTGGAACACAAAGGTGAACAACATGATTCCTGCTCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS CCA 90 bp TGTCTGAATCACATCTTTGTGTCCCATCTCACAGGCTCGGAAAAGTaGAGTATGTTTCATAACATCAGTAGCATCTACTTGAGCATTATT +
Preference number: 5 (lower is better)
Translates to: CLNHIFVSHLTGSEK*SMFHNISSIYLSII
Trigger: AATAATGCTCAAGTAGATGCTACTGATGTTATGAAACATACTCCACTTTTCCGAGCCTGTGAGATGGGACACAAAGATGTGATTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGTCAAGGTATCCATTGTaGCAGGACCAATGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: FALIYENNVWAFLLMCRLSRYPL*QDQCKA
Trigger: AGCTTTGCATTGGTCCTGCAACAATGGATACCTTGA...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGGTGGACACAAGCAGATaGGCCTTTAGAATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FALIYENNVWAFLLMCRLVDTSR*AFRMFS
Trigger: AGAGAACATTCTAAAGGCCAATCTGCTTGTGTCCAC...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTATGACTGCTGCTGCCTaGTTCTTTTTGCGAAACAGC +
Preference number: 5 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSMTAAA*FFLRNS
Trigger: GCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCAT...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 90 bp CACACTGCAAAGGGGTTCTTCCTGCATAATCCTGGACATTTGGATTaGTCTTATTTTCTATTAATATCTGGCAAACATCAGCATTTCCTC +
Preference number: 5 (lower is better)
Translates to: HTAKGFFLHNPGHLD*SYFLLISGKHQHFL
Trigger: GAGGAAATGCTGATGTTTGCCAGATATTAATAGAAAATAAGATCAATCCAAATGTCCAGGATTATGCAGGAAGAACCCCTTTGCAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS-3UTR CAA 90 bp TTTGCACTGATATATGAAAATAATGTTTGGGCGTTCCTATTGATGTGTAGGCTGATGTTAGAATCATGCTaGATGAGCAGCTTCACATGC +
Preference number: 5 (lower is better)
Translates to: FALIYENNVWAFLLMCRLMLESC*MSSFTC
Trigger: GCATGTGAAGCTGCTCATCAAGCATGATTCTAACAT...CAGCCTACACATCAATAGGAACGCCCAAACATTATTTTCATATATCAGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTGCATCAAGGTATCCATaGTTGCAGGACCAATGCAAA +
Preference number: 5 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSASRYP*LQDQCK
Trigger: TTTGCATTGGTCCTGCAACAATGGATACCTTGATGC...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTCATGGTCATAGGCGGTaGTGCATTGTGCATTTCATA +
Preference number: 5 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSHGHRR*CIVHFI
Trigger: TATGAAATGCACAATGCACAACCGCCTATGACCATG...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS-3UTR CAA 90 bp ATTTTATTTAAACCAGGTGTTCTTAGAATGCTAGGATGTGTGCCGTTTCATTCTTGCAGAGCTGTTTGCTaGTTTTTATCCTGTGTATCC +
Preference number: 5 (lower is better)
Translates to: ILFKPGVLRMLGCVPFHSCRAVC*FLSCVS
Trigger: GGATACACAGGATAAAAACAAGCAAACAGCTCTGCA...AGAATGAAACGGCACACATCCTAGCATTCTAAGAACACCTGGTTTAAATAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 72 bp CTTAGCAACCGGAGCAACCCTCGCCTCCTCCAGGACTaGCGTCCCGGGGGCGGCTCCAGGAGGCGCAACCCG +
Preference number: 6 (lower is better)
Translates to: LSNRSNPRLLQD*RPGGGSRRRNP
Trigger: CGGGTTGCGCCTCCTGGAGCCGCCCCCGGGACGTCAGTCCTGGAGGAGGCGAGGGTTGCTCCGGTTGCTAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000466647.5
ENST00000496467.5
CDS GCA 72 bp CTCCAGGAGGCGCAACCCGGACCGGGCCGCCCCTCCTaGCGGGCCGGTACACTATATCCAGCCAGGTCAGAC +
Preference number: 6 (lower is better)
Translates to: LQEAQPGPGRPS*RAGTLYPARSD
Trigger: GTCTGACCTGGCTGGATATAGTGTACCGGCCCGGCAGGAGGGGCGGCCCGGTCCGGGTTGCGCCTCCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000466647.5
ENST00000480309.1
ENST00000496467.5
CDS GCA 72 bp CAGGGCCTTGGGCCACGTTGCCAGCAGGAGGCTGCTTaGTGGGGGCCCGGCTCTGCCTGCTGGGCACATCCT +
Preference number: 6 (lower is better)
Translates to: QGLGPRCQQEAA*WGPGSACWAHP
Trigger: AGGATGTGCCCAGCAGGCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTGGCAACGTGGCCCAAGGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CAA 90 bp TCTCTTGGCTCAGGGCCTTGGGCCACGTTGCCAGCAGGAGGCTGCTaGCTGGGGGCCCGGCTCTGCCTGCTGGGCACATCCTGGGTGCTA +
Preference number: 6 (lower is better)
Translates to: SLGSGPWATLPAGGC*LGARLCLLGTSWVL
Trigger: TAGCACCCAGGATGTGCCCAGCAGGCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTGGCAACGTGGCCCAAGGCCCTGAGCCAAGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS TCA 72 bp TGTCAGCTTTCTAGGTTTCCTCGCCTCCTCCAGGACTaGCGTCCCGGGGGCGGCTCCAGGAGGCGCAACCCG +
Preference number: 6 (lower is better)
Translates to: CQLSRFPRLLQD*RPGGGSRRRNP
Trigger: CGGGTTGCGCCTCCTGGAGCCGCCCCCGGGACGTCAGTCCTGGAGGAGGCGAGGAAACCTAGAAAGCTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480309.1
CDS GCA 72 bp GTGTCATGCCGCCTGCTGGGCTTCCAGTGGCTATCGTaGGGTGGAAGGCTTGCAGCTGCCCGCCTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: VSCRLLGFQWLS*GGRLAAARLES
Trigger: GGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 72 bp ATGCCGCCTGCTGGGCTTCCAGTGGCTATCGTGCGGTaGAAGGCTTGCAGCTGCCCGCCTGGAGTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: MPPAGLPVAIVR*KACSCPPGVLS
Trigger: GGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 72 bp GGCTATCGTGCGGTGGAAGGCTTGCAGCTGCCCGCCTaGAGTCCTCTCCTTTCTCATCAGGCCCAGCCACCC +
Preference number: 6 (lower is better)
Translates to: GYRAVEGLQLPA*SPLLSHQAQPP
Trigger: GGGTGGCTGGGCCTGATGAGAAAGGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 72 bp TTGGGTTCTGTGTCATGCCGCCTGCTGGGCTTCCAGTaGCTATCGTGCGGTGGAAGGCTTGCAGCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: LGSVSCRLLGFQ*LSCGGRLAAAR
Trigger: GCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACACAGAACCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 72 bp GCTGGGCTTCCAGTGGCTATCGTGCGGTGGAAGGCTTaGAGCTGCCCGCCTGGAGTCCTCTCCTTTCTCATC +
Preference number: 6 (lower is better)
Translates to: AGLPVAIVRWKA*SCPPGVLSFLI
Trigger: GATGAGAAAGGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 72 bp GGGCACATTTGGCCTTGGGTTCTGTGTCATGCCGCCTaGTGGGCTTCCAGTGGCTATCGTGCGGTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GHIWPWVLCHAA*WASSGYRAVEG
Trigger: GCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACACAGAACCCAAGGCCAAATGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CAA 72 bp TGCTGGGCTTCCAGTGGCTATCGTGCGGTGGAAGGCTaGCAGCTGCCCGCCTGGAGTCCTCTCCTTTCTCAT +
Preference number: 6 (lower is better)
Translates to: CWASSGYRAVEG*QLPAWSPLLSH
Trigger: ATGAGAAAGGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 72 bp CACATTTGGCCTTGGGTTCTGTGTCATGCCGCCTGCTaGGCTTCCAGTGGCTATCGTGCGGTGGAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: HIWPWVLCHAAC*ASSGYRAVEGL
Trigger: CAAGCCTTCCACCGCACGATAGCCACTGGAAGCCCAGCAGGCGGCATGACACAGAACCCAAGGCCAAATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS TCA 72 bp TGGAGTCCTCTCCTTTCTCATCAGGCCCAGCCACCCTaGTACAGGAGGGCTGCTTCACGAAGCCTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: WSPLLSHQAQPP*YRRAASRSLSP
Trigger: AGGGGAAAGGCTTCGTGAAGCAGCCCTCCTGTATCAGGGTGGCTGGGCCTGATGAGAAAGGAGAGGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 72 bp TTCTCATCAGGCCCAGCCACCCTGATACAGGAGGGCTaGTTCACGAAGCCTTTCCCCTTTGCACACCGCTCA +
Preference number: 6 (lower is better)
Translates to: FSSGPATLIQEG*FTKPFPFAHRS
Trigger: TGAGCGGTGTGCAAAGGGGAAAGGCTTCGTGAAGCAGCCCTCCTGTATCAGGGTGGCTGGGCCTGATGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CCA 72 bp CCTTTGCACACCGCTCATCGCCAGCTGTCTCACCTCTaGACTTCTCAACAGAGGGAACTCCTGGATGCCTGC +
Preference number: 6 (lower is better)
Translates to: PLHTAHRQLSHL*TSQQRELLDAC
Trigger: GCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGGTGAGACAGCTGGCGATGAGCGGTGTGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 72 bp CTGGTAGCTTCGCCAGGCGCGCTGGATGACTGCTGCTaGCTTGTTCTTTTTGCGAAACAGCTCCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LVASPGALDDCC*LVLFAKQLLPP
Trigger: AGGAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAGCTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 72 bp GAGCTGGTAGCTTCGCCAGGCGCGCTGGATGACTGCTaGTGCCTTGTTCTTTTTGCGAAACAGCTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: ELVASPGALDDC*CLVLFAKQLLP
Trigger: AGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAGCTACCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 72 bp CCTGAGCTGGTAGCTTCGCCAGGCGCGCTGGATGACTaGTGCTGCCTTGTTCTTTTTGCGAAACAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: PELVASPGALDD*CCLVLFAKQLL
Trigger: AAGGAGCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAGCTACCAGCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 72 bp GTTCCCTGCAAATCTGAGGAAACATGCTGCTCCTTCTaGAGGGCTCCGCCTAGAGACCCTCCTGGAGATCCT +
Preference number: 6 (lower is better)
Translates to: VPCKSEETCCSF*RAPPRDPPGDP
Trigger: AGGATCTCCAGGAGGGTCTCTAGGCGGAGCCCTCCAGAAGGAGCAGCATGTTTCCTCAGATTTGCAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS TCA 72 bp GTATGGCTGCGATGGACAGGGCACCGTGCTCCAACATaGACTGGATCACTTCATGGCGCTCACCAAGCAAAG +
Preference number: 6 (lower is better)
Translates to: VWLRWTGHRAPT*TGSLHGAHQAK
Trigger: CTTTGCTTGGTGAGCGCCATGAAGTGATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS TCA 72 bp AGGGGACCAGGTGCTGGATCAGTCTCCTTAGATACCTaGAAGTCCTCGGACAGGGTAGATGTCTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: RGPGAGSVSLDT*KSSDRVDVSSL
Trigger: GAGGCTGGAGACATCTACCCTGTCCGAGGACTTTCAGGTATCTAAGGAGACTGATCCAGCACCTGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 72 bp GCGATGTCTTGTATGGCTGCGATGGACAGGGCACCGTaGTCCAACATGAACTGGATCACTTCATGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: AMSCMAAMDRAP*SNMNWITSWRS
Trigger: TGAGCGCCATGAAGTGATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 72 bp AGCTTGGCTTGTGTCACTTTGTTTCTTGGTGTACGATaGTGGGGAGGATTCTGCCCAGCATGGACCGCCTCC +
Preference number: 6 (lower is better)
Translates to: SLACVTLFLGVR*WGGFCPAWTAS
Trigger: GGAGGCGGTCCATGCTGGGCAGAATCCTCCCCACCATCGTACACCAAGAAACAAAGTGACACAAGCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS GCA 72 bp AGCTTGGATTTTGAAGGCGGCGATGTCTTGTATGGCTaGGATGGACAGGGCACCGTGCTCCAACATGAACTG +
Preference number: 6 (lower is better)
Translates to: SLDFEGGDVLYG*DGQGTVLQHEL
Trigger: CAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCGCCGCCTTCAAAATCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 72 bp TTCCTCCAAACCTGGAGGAGCAATGCTGTAGACTCTTaGCTCCATCTGTCCACATCTCCAGCTCCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: FLQTWRSNAVDS*LHLSTSPAPSC
Trigger: GCAGCTTGGAGCTGGAGATGTGGACAGATGGAGGCAAGAGTCTACAGCATTGCTCCTCCAGGTTTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 72 bp CCTGCCTGTGCTGATTGTTCTCAATGCCTTCTGGGCTaGAAGATGGAGGGCTGTTCTCTGGCTATGGTCAGT +
Preference number: 6 (lower is better)
Translates to: PACADCSQCLLG*KMEGCSLAMVS
Trigger: ACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGGCATTGAGAACAATCAGCACAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS GCA 72 bp GCCAAACACTTAGGGCTCCTGTGCCGGGTGGTCAAGTaGAAAGGAGTCATCTCTTCCAGATCCTTTTGCATC +
Preference number: 6 (lower is better)
Translates to: AKHLGLLCRVVK*KGVISSRSFCI
Trigger: GATGCAAAAGGATCTGGAAGAGATGACTCCTTTGCACTTGACCACCCGGCACAGGAGCCCTAAGTGTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
ENST00000466647.5
ENST00000496467.5
CDS GCA 72 bp ATCCACTTCTCCTGGTGCCATAAACTTCAGCAGAAGTaGCAAACACTTAGGGCTCCTGTGCCGGGTGGTCAA +
Preference number: 6 (lower is better)
Translates to: IHFSWCHKLQQK*QTLRAPVPGGQ
Trigger: TTGACCACCCGGCACAGGAGCCCTAAGTGTTTGGCACTTCTGCTGAAGTTTATGGCACCAGGAGAAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
ENST00000496467.5
CDS GCA 72 bp AGCTCTCTGGACTTCTCAACAGAGGGAACTCCTGGATaGCTGCTTCCATCACTGCCTTCATTGGGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SSLDFSTEGTPG*LLPSLPSLGLK
Trigger: CTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262456.6
CDS GCA 72 bp TCACCTCTGGACTTCTCAACAGAGGGAACTCCTGGATaGCTGCTTCCATCACTGCCTTCATTGGGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SPLDFSTEGTPG*LLPSLPSLGLK
Trigger: CTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGAAGTCCAGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CAA 72 bp TTTGTAGACAGCTTGGATTTTGAAGGCGGCGATGTCTaGTATGGCTGCGATGGACAGGGCACCGTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: FVDSLDFEGGDV*YGCDGQGTVLQ
Trigger: TTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCGCCGCCTTCAAAATCCAAGCTGTCTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CAA 90 bp CTTGTACCCTTTGTAGACAGCTTGGATTTTGAAGGCGGCGATGTCTaGTATGGCTGCGATGGACAGGGCACCGTGCTCCAACATGAACTG +
Preference number: 6 (lower is better)
Translates to: LVPFVDSLDFEGGDV*YGCDGQGTVLQHEL
Trigger: CAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCGCCGCCTTCAAAATCCAAGCTGTCTACAAAGGGTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CAA 90 bp CCTGTCTCGGAAGGCTTTTCTGACCTTGTACCCTTTGTAGACAGCTaGGATTTTGAAGGCGGCGATGTCTTGTATGGCTGCGATGGACAG +
Preference number: 6 (lower is better)
Translates to: PVSEGFSDLVPFVDS*DFEGGDVLYGCDGQ
Trigger: CTGTCCATCGCAGCCATACAAGACATCGCCGCCTTCAAAATCCAAGCTGTCTACAAAGGGTACAAGGTCAGAAAAGCCTTCCGAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 72 bp GTCAATATTCACACTCTGCCCAGAGAGGGGACCAGGTaGTGGATCAGTCTCCTTAGATACCTGAAAGTCCTC +
Preference number: 6 (lower is better)
Translates to: VNIHTLPREGTR*WISLLRYLKVL
Trigger: GAGGACTTTCAGGTATCTAAGGAGACTGATCCAGCACCTGGTCCCCTCTCTGGGCAGAGTGTGAATATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262457.7
CDS CAA 90 bp CTGTTGGAGCAGCATCCAGAATGCATCTCACTGTGTGAACAGCACTaGGATCTTTATGGTTGGCTGCCCAGTGAAGTGGGATCTTGCCTT +
Preference number: 6 (lower is better)
Translates to: LLEQHPECISLCEQH*DLYGWLPSEVGSCL
Trigger: AAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGATGCATTCTGGATGCTGCTCCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS TCA 72 bp TCTGTTGGAGCAGCATCCAGAATGCATCTCACTGTGTaGACAGCACTTGGATCTTTATGGTTGGCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: SVGAASRMHLTV*TALGSLWLAAQ
Trigger: CTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGATGCATTCTGGATGCTGCTCCAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS GCA 72 bp CACTGTGTGAACAGCACTTGGATCTTTATGGTTGGCTaGCCAGTGAAGTGGGATCTTGCCTTCAACATCAGG +
Preference number: 6 (lower is better)
Translates to: HCVNSTWIFMVG*PVKWDLAFNIR
Trigger: CCTGATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS GCA 72 bp CAAGACATCAACCACGGTCACATTCCCATCAGCAACTaGAAAGTGAAGAGGAGTTCGACCCTCGTAGTCTTG +
Preference number: 6 (lower is better)
Translates to: QDINHGHIPISN*KVKRSSTLVVL
Trigger: CAAGACTACGAGGGTCGAACTCCTCTTCACTTTGCAGTTGCTGATGGGAATGTGACCGTGGTTGATGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CAA 72 bp CAGCATCCAGAATGCATCTCACTGTGTGAACAGCACTaGGATCTTTATGGTTGGCTGCCCAGTGAAGTGGGA +
Preference number: 6 (lower is better)
Translates to: QHPECISLCEQH*DLYGWLPSEVG
Trigger: TCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGATGCATTCTGGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS CAA 90 bp ACTTGTGATGCTAATGATGAACCAGCAAACAGCAGGTTCTCTGACTaGTTCATAGTCTTCTTAGCAACCGGAGCAACCCTCGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TCDANDEPANSRFSD*FIVFLATGATLASS
Trigger: GGAGGAGGCGAGGGTTGCTCCGGTTGCTAAGAAGACTATGAACAAGTCAGAGAACCTGCTGTTTGCTGGTTCATCATTAGCATCACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000466647.5
ENST00000496467.5
CDS GCA 72 bp GAGAACTGCCATGCAGTTGATATAGCCTCCATATGCTaGACACTGCAAAGGGGTTCTTCCTGCATAATCCTG +
Preference number: 6 (lower is better)
Translates to: ENCHAVDIASIC*TLQRGSSCIIL
Trigger: CAGGATTATGCAGGAAGAACCCCTTTGCAGTGTGCAGCATATGGAGGCTATATCAACTGCATGGCAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 72 bp TGCCTGCTTCCATCACTGCCTTCATTGGGTCTGAAGTaGACACAAGCAGATTGGCCTTTAGAATGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: CLLPSLPSLGLK*TQADWPLECSL
Trigger: CAGAGAACATTCTAAAGGCCAATCTGCTTGTGTCCACTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CAA 72 bp GACCCTCGTAGTCTTGCCAGTTCAGTAAAGACTCTGTaGGAGCAGCATCCAGAATGCATCTCACTGTGTGAA +
Preference number: 6 (lower is better)
Translates to: DPRSLASSVKTL*EQHPECISLCE
Trigger: TTCACACAGTGAGATGCATTCTGGATGCTGCTCCAACAGAGTCTTTACTGAACTGGCAAGACTACGAGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS CAA 90 bp GCTTCCATCACTGCCTTCATTGGGTCTGAAGTGGACACAAGCAGATaGGCCTTTAGAATGTTCTCTGGCTGTTTCATTTGGCCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: ASITAFIGSEVDTSR*AFRMFSGCFIWPSG
Trigger: TCCAGAAGGCCAAATGAAACAGCCAGAGAACATTCTAAAGGCCAATCTGCTTGTGTCCACTTCAGACCCAATGAAGGCAGTGATGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS TCA 72 bp ACTAGATCTACCCTTGCTCCACCTTTAATGAGTGTCTaGATCACATCTTTGTGTCCCATCTCACAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: TRSTLAPPLMSV*ITSLCPISQAR
Trigger: CCGAGCCTGTGAGATGGGACACAAAGATGTGATTCAGACACTCATTAAAGGTGGAGCAAGGGTAGATCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS TCA 72 bp GTTAATTGCTGCCATGAGGGTAGGCAAGTCCTTTTCTaGTTTCACCAAAAAGCAGGTCACGCCAATCGCTGT +
Preference number: 6 (lower is better)
Translates to: VNCCHEGRQVLF*FHQKAGHANRC
Trigger: ACAGCGATTGGCGTGACCTGCTTTTTGGTGAAATCAGAAAAGGACTTGCCTACCCTCATGGCAGCAATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480309.1
CDS CCA 72 bp TGTAGAGCACCCTTATCTCCATTAACGGCAGCAGCATaGACTTGTGATGCTAATGATGAACCAGCAAACAGC +
Preference number: 6 (lower is better)
Translates to: CRAPLSPLTAAA*TCDANDEPANS
Trigger: GCTGTTTGCTGGTTCATCATTAGCATCACAAGTCCATGCTGCTGCCGTTAATGGAGATAAGGGTGCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000460636.2
ENST00000466647.5
ENST00000496467.5
CDS CCA 72 bp AGCACTTGGATCTTTATGGTTGGCTGCCCAGTGAAGTaGGATCTTGCCTTCAACATCAGGAATCCCAATGTT +
Preference number: 6 (lower is better)
Translates to: STWIFMVGCPVK*DLAFNIRNPNV
Trigger: AACATTGGGATTCCTGATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS CCA 72 bp ATCTCACTGTGTGAACAGCACTTGGATCTTTATGGTTaGCTGCCCAGTGAAGTGGGATCTTGCCTTCAACAT +
Preference number: 6 (lower is better)
Translates to: ISLCEQHLDLYG*LPSEVGSCLQH
Trigger: ATGTTGAAGGCAAGATCCCACTTCACTGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000460636.2
CDS CCA 72 bp CCCAGTGCTGCCCAATGTAGAAGAGAATGTCCATCTTaGTCAACTAGATCTACCCTTGCTCCACCTTTAATG +
Preference number: 6 (lower is better)
Translates to: PSAAQCRRECPS*STRSTLAPPLM
Trigger: CATTAAAGGTGGAGCAAGGGTAGATCTAGTTGACCAAGATGGACATTCTCTTCTACATTGGGCAGCACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 72 bp CTGCCTTCATTGGGTCTGAAGTGGACACAAGCAGATTaGCCTTTAGAATGTTCTCTGGCTGTTTCATTTGGC +
Preference number: 6 (lower is better)
Translates to: LPSLGLKWTQAD*PLECSLAVSFG
Trigger: GCCAAATGAAACAGCCAGAGAACATTCTAAAGGCCAATCTGCTTGTGTCCACTTCAGACCCAATGAAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CAA 72 bp GCTAATGATGAACCAGCAAACAGCAGGTTCTCTGACTaGTTCATAGTCTTCTTAGCAACCGGAGCAACCCTC +
Preference number: 6 (lower is better)
Translates to: ANDEPANSRFSD*FIVFLATGATL
Trigger: GAGGGTTGCTCCGGTTGCTAAGAAGACTATGAACAAGTCAGAGAACCTGCTGTTTGCTGGTTCATCATTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000466647.5
ENST00000496467.5
CDS CAA 72 bp GTTACTCTGAGCAGCATAGTGCAAAGGTGTGGCTCCTaGGCTGTCAGATGGGATAGTTCCAGACTTATTTCT +
Preference number: 6 (lower is better)
Translates to: VTLSSIVQRCGS*AVRWDSSRLIS
Trigger: AGAAATAAGTCTGGAACTATCCCATCTGACAGCCAAGGAGCCACACCTTTGCACTATGCTGCTCAGAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS TCA 72 bp CTTGAGCATTATTTTCCAGTAATAACTTCACGGTGCTaGCATGGCCAGAAAGAGCAGCAGCATGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LEHYFPVITSRC*HGQKEQQHAKL
Trigger: CAGCTTTGCATGCTGCTGCTCTTTCTGGCCATGTCAGCACCGTGAAGTTATTACTGGAAAATAATGCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS GCA 72 bp TCTCTGGCTATGGTCAGTTTTATTCACATCTGCTCCTaGCTTCAGAAGAGCATCTGCACAATCCAATCTGTC +
Preference number: 6 (lower is better)
Translates to: SLAMVSFIHICS*LQKSICTIQSV
Trigger: GACAGATTGGATTGTGCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACTGACCATAGCCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262456.6
ENST00000262457.7
ENST00000374921.3
ENST00000460636.2
ENST00000466647.5
ENST00000496467.5
CDS GCA 72 bp ATAGAGGTGGAGGTGAAAACATGGGAGGGGAGTAACTaGACTTGGGTTCTAGGCCCAGTTGTATTTATAATC +
Preference number: 6 (lower is better)
Translates to: IEVEVKTWEGSN*TWVLGPVVFII
Trigger: GATTATAAATACAACTGGGCCTAGAACCCAAGTGCAGTTACTCCCCTCCCATGTTTTCACCTCCACCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480309.1
CDS CCA 72 bp GCATTATTTTCCAGTAATAACTTCACGGTGCTGACATaGCCAGAAAGAGCAGCAGCATGCAAAGCTGTACCT +
Preference number: 6 (lower is better)
Translates to: ALFSSNNFTVLT*PERAAACKAVP
Trigger: AGGTACAGCTTTGCATGCTGCTGCTCTTTCTGGCCATGTCAGCACCGTGAAGTTATTACTGGAAAATAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 72 bp GGGATAGTTCCAGACTTATTTCTTTCTAAAAGGAGATaGACAATCTGTGCATGGCCTAATAAAGCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: GIVPDLFLSKRR*TICAWPNKAAQ
Trigger: CTGGGCAGCTTTATTAGGCCATGCACAGATTGTCCATCTCCTTTTAGAAAGAAATAAGTCTGGAACTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 72 bp CACATCTTTGTGTCCCATCTCACAGGCTCGGAAAAGTaGAGTATGTTTCATAACATCAGTAGCATCTACTTG +
Preference number: 6 (lower is better)
Translates to: HIFVSHLTGSEK*SMFHNISSIYL
Trigger: CAAGTAGATGCTACTGATGTTATGAAACATACTCCACTTTTCCGAGCCTGTGAGATGGGACACAAAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CCA 72 bp AAGTTATATCTACTGGAATGGGACACATTAACTATGTaGCCAAAGAAGGAAAGCAACAACTTCAGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: KLYLLEWDTLTM*PKKESNNFSPW
Trigger: CCAGGGGCTGAAGTTGTTGCTTTCCTTCTTTGGCCACATAGTTAATGTGTCCCATTCCAGTAGATATAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460636.2
CDS CCA 72 bp AAGTTATATCTACTGGAATGGGACACATTAACTATGTaGCCAAAGAAGGAAAGCAACAACTTCAGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: KLYLLEWDTLTM*PKKESNNFSPF
Trigger: GAAGGGGCTGAAGTTGTTGCTTTCCTTCTTTGGCCACATAGTTAATGTGTCCCATTCCAGTAGATATAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466647.5
CDS CAA 72 bp AAGTCTAGCAGTAATTTAATGGCATCAAGGTATCCATaGTTGCAGGACCAATGCAAAGCTGTTCTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: KSSSNLMASRYP*LQDQCKAVLPS
Trigger: AGAGGGAAGAACAGCTTTGCATTGGTCCTGCAACAATGGATACCTTGATGCCATTAAATTACTGCTAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262456.6
ENST00000262457.7
CDS CAA 90 bp AAAGGCCAGGATGAATGTGGTACTCACTTTACGTGTTTCTCTTCTTaGAATGATTGTAGTCTCTTAGATCCTGCCTGTGCTGATTGTTCT +
Preference number: 6 (lower is better)
Translates to: KGQDECGTHFTCFSS*NDCSLLDPACADCS
Trigger: AGAACAATCAGCACAGGCAGGATCTAAGAGACTACAATCATTCAAAGAAGAGAAACACGTAAAGTGAGTACCACATTCATCCTGGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374921.3
CDS TCA 72 bp GCAGCAACAATTCAAACACCTGATGGGAAGGAAAGATaGATAGTTGCATCAGTGATCTTAAACATCCTTCCT +
Preference number: 6 (lower is better)
Translates to: AATIQTPDGKER*IVASVILNILP
Trigger: AGGAAGGATGTTTAAGATCACTGATGCAACTATTCATCTTTCCTTCCCATCAGGTGTTTGAATTGTTGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480309.1
CDS CCA 72 bp ATGATTGGAGAAAAGGCGAAGTTATATCTACTGGAATaGGACACATTAACTATGTGGCCAAAGAAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: MIGEKAKLYLLE*DTLTMWPKKES
Trigger: GCTTTCCTTCTTTGGCCACATAGTTAATGTGTCCCATTCCAGTAGATATAACTTCGCCTTTTCTCCAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460636.2
ENST00000466647.5
CDS TCA 72 bp GAAAGCAACAACTTCAGCCCCTGGTATAAGTGTTCCTaGAAAGTTTCAGAGGTATTCTTTCTCCTTTTTGTA +
Preference number: 6 (lower is better)
Translates to: ESNNFSPWYKCS*KVSEVFFLLFV
Trigger: TACAAAAAGGAGAAAGAATACCTCTGAAACTTTTCAGGAACACTTATACCAGGGGCTGAAGTTGTTGCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460636.2
CDS CAA 72 bp ATGAGCTGGTATTTGTCTTGTCATCGACAAGGATTATaGGTTCAAATTCTGCCCTTGAGAGAACATATTAAT +
Preference number: 6 (lower is better)
Translates to: MSWYLSCHRQGL*VQILPLREHIN
Trigger: ATTAATATGTTCTCTCAAGGGCAGAATTTGAACCAATAATCCTTGTCGATGACAAGACAAATACCAGCTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480309.1