RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INTS9 (Homo sapiens)

Ensembl gene IDs: ENSG00000104299

Ensembl transcript IDs: ENST00000416984.6, ENST00000517383.1, ENST00000518510.5, ENST00000519578.1, ENST00000520005.1, ENST00000520184.1, ENST00000520316.5, ENST00000520437.1, ENST00000520831.1, ENST00000520983.5, ENST00000521022.6, ENST00000521070.1, ENST00000521777.5, ENST00000522074.1, ENST00000522363.5, ENST00000523076.1, ENST00000523303.5, ENST00000523436.5, ENST00000524081.5

Found 762 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTaGTGCAAGACAGCCAGCCAGTCACCTCCGCCTCCCATGAACCTC +
Preference number: 1 (lower is better)
Translates to: SKRNQRLAPLAEAWD*CKTASQSPPPPMNL
Trigger: GAGGTTCATGGGAGGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR GCA 90 bp CAGAGCTCCATGAAGTGGACCACGTCCCCGAAGCGGAGGGAAGGGTaGCCGGTGAACACCACACAGGGCTGTCTAAAGTCGTTGCTGAAG +
Preference number: 1 (lower is better)
Translates to: QSSMKWTTSPKRREG*PVNTTQGCLKSLLK
Trigger: CTTCAGCAACGACTTTAGACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTTCGGGGACGTGGTCCACTTCATGGAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR TCA 90 bp GACAGTTGCCAAGGAGATGCCAGGCTTGATCTCCATGGGCACCAGTaGATCTGCGAGCTGAAAGCAAAGGGCGCAGTTCAGGCTGGGGGC +
Preference number: 1 (lower is better)
Translates to: DSCQGDARLDLHGHQ*ICELKAKGAVQAGG
Trigger: GCCCCCAGCCTGAACTGCGCCCTTTGCTTTCAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR CCA 90 bp GTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTaGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTC +
Preference number: 1 (lower is better)
Translates to: VQHCRQVNETKGWLP*PRPGTDARQPASHL
Trigger: GAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR TCA 90 bp TGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTGAATCTGCGAGCTGAAAGCAAAGGG +
Preference number: 1 (lower is better)
Translates to: WCAARPRQLPRRCQA*SPWAPVNLRAESKG
Trigger: CCCTTTGCTTTCAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR CCA 90 bp TCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTaGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: SYCVQHCRQVNETKG*LPWPRPGTDARQPA
Trigger: GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR CCA 90 bp CACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGG +
Preference number: 1 (lower is better)
Translates to: HRDGTAQQRLQDFAV*YVIAHPLSLLPARG
Trigger: CCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR TCA 90 bp GAGATGCCAGGCTTGATCTCCATGGGCACCAGTGAATCTGCGAGCTaGAAGCAAAGGGCGCAGTTCAGGCTGGGGGCCTTTAATGATGAC +
Preference number: 1 (lower is better)
Translates to: EMPGLISMGTSESAS*KQRAQFRLGAFNDD
Trigger: GTCATCATTAAAGGCCCCCAGCCTGAACTGCGCCCTTTGCTTTCAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR GCA 90 bp ACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGC +
Preference number: 1 (lower is better)
Translates to: TAPQGWNRSTKASGL*SLVRHRSPAFSSSR
Trigger: GCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CCA 90 bp TCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCAGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: SRSRTLSISSLSQMI*VESSSIWMSVSASW
Trigger: CCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CCA 90 bp TCTTCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCCACCTTAATATCACTGAAGCCATGC +
Preference number: 1 (lower is better)
Translates to: SSIWMSVSASWSRTI*PLAVSSTLISLKPC
Trigger: GCATGGCTTCAGTGATATTAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CCA 90 bp ATATGGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCCACCTTAATA +
Preference number: 1 (lower is better)
Translates to: IWVESSSIWMSVSAS*SRTIWPLAVSSTLI
Trigger: TATTAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR TCA 90 bp AGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAAGGGCATAGCCAGAGCTCAGAGGAG +
Preference number: 1 (lower is better)
Translates to: RRIQRHKTLSRNETG*SSWSSQGHSQSSEE
Trigger: CTCCTCTGAGCTCTGGCTATGCCCTTGGGAGCTCCAACTGGATCATCCAGTCTCATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
3UTR CCA 90 bp CGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTGATAGTTAGAGATGAGAATCACATC +
Preference number: 1 (lower is better)
Translates to: RGIHCACEAGVLGDV*QRHHTVIVRDENHI
Trigger: GATGTGATTCTCATCTCTAACTATCACTGTATGATGGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520437.1
3UTR CCA 90 bp CTGCAGAACTCTCCCACCATTCCATCTGGGTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAA +
Preference number: 1 (lower is better)
Translates to: LQNSPTIPSGFAVGI*VSPVRTRTSLFLRE
Trigger: TTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGAATGGTGGGAGAGTTCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR CCA 90 bp CCTCTGAATGTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAAGCCT +
Preference number: 1 (lower is better)
Translates to: PLNVLILPQGGRLSL*HSFNEIHQLFHEKP
Trigger: AGGCTTCTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATTCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR GCA 90 bp AGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTaGGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: RQMGSLYHILGSSSY*VQHCRQVNETKGWL
Trigger: GAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR CCA 90 bp AAGTGTTTATTAACAAATGGGCTCAGAGTAGAAAATGCAGACAGATaGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTAC +
Preference number: 1 (lower is better)
Translates to: KCLLTNGLRVENADR*VHFTIFWDHHLIAY
Trigger: GTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTCTACTCTGAGCCCATTTGTTAATAAACACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR TCA 90 bp TACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGGCCGTGGGCTGGGGGCGGCTaGGTGTACTGCTCAGGACAC +
Preference number: 2 (lower is better)
Translates to: YVIAHPLSLLPARGLGGPWAGGG*VYCSGH
Trigger: GTGTCCTGAGCAGTACACTCAGCCGCCCCCAGCCCA...CGGCCCGCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: TKGWLPWPRPGTDARQPASSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp GACCACGTCCCCGAAGCGGAGGGAAGGGTGCCCGGTGAACACCACACAGGGCTGCACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: DHVPEAEGRVPGEHHTGLHGRDS*QGDARL
Trigger: AAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG...CAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTTCGGGGACGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCCGAGGCCTGGGACTaGTGCAAGACAGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDAEAWD*CKTASQ
Trigger: CTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGC...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 2 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCATGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 2 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGATCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: VNETKGWLPWPRPGTDARSSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCCACCTCCGCCTCCCATaGACCTCTTGGAAAACTTCT +
Preference number: 2 (lower is better)
Translates to: TKGWLPWPRPGTDARQPAHLRLP*TSWKTS
Trigger: AGAAGTTTTCCAAGAGGTTCATGGGAGGCGGAGGTG...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGC +
Preference number: 2 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAKASGL*SLVRHR
Trigger: GCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR-3UTR TCA 90 bp TCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: SIWMSVSASWSRTIWPLASSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...AGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTAGTGAATCTGCGAGCTaGAAGCAAAGGGCGCAGTTC +
Preference number: 2 (lower is better)
Translates to: KGWLPWPRPGTDARQPASSESAS*KQRAQF
Trigger: GAACTGCGCCCTTTGCTTTCAGCTCGCAGATTCACT...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR-3UTR CCA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCTGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 2 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGCRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR GCA 90 bp GGGTGCCCGGTGAACACCACACAGGGCTGTCTAAAGTCGTTGCTGAAGTCTCCGAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCG +
Preference number: 2 (lower is better)
Translates to: GCPVNTTQGCLKSLLKSPRVCTN*STGMEP
Trigger: CGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCT...CGGAGACTTCAGCAACGACTTTAGACAGCCCTGTGTGGTGTTCACCGGGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR CAA 90 bp TTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGTGAATCTGCGAGCTCTGGCATGATC +
Preference number: 2 (lower is better)
Translates to: LVCSTAETVAKEMPG*ISMGTSESASSGMI
Trigger: GATCATGCCAGAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATCTCCATGGGCACCAGTaGATCTGCGAGCTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDLHGHQ*ICELKA
Trigger: TGCTTTCAGCTCGCAGATTCACTGGTGCCCATGGAG...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR-3UTR TCA 90 bp GTCTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 2 (lower is better)
Translates to: VCTNCSTGMEPLNKGFRTCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...AGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp TATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: YCVQHCRQVNETKGWLPWSSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...CCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR TCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 2 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR CCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCAAAGGCTGGCTCCCCTaGCCGAGGCCTGGGACTGAT +
Preference number: 2 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAKGWLP*PRPGTD
Trigger: ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 2 (lower is better)
Translates to: EDTTKTQLMASHATPQVACEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp TGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCATGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 2 (lower is better)
Translates to: CLLSLVCSTAETVAKEMPCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...TGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp ATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCCGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 2 (lower is better)
Translates to: MSVSASWSRTIWPLAVSSGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp CACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTGATCTCCATGGGCACCAGACTTCTGTAAGAATTTaGGGACAAGGTCCCGCAGTC +
Preference number: 2 (lower is better)
Translates to: HGRDSCQGDARLDLHGHQTSVRI*GQGPAV
Trigger: GACTGCGGGACCTTGTCCTCAAATTCTTACAGAAGT...CTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CCA 90 bp CTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGGGCGCAGTTCAGGCTaGGGGCCTTTAATGATGACC +
Preference number: 2 (lower is better)
Translates to: LHELLHRDGTAQQRLQDFGRSSG*GPLMMT
Trigger: GGTCATCATTAAAGGCCCCCAGCCTGAACTGCGCCC...AAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR-3UTR CCA 90 bp TCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGTCTTCTTCCCGCTCGTaGGCTGGGCGGGCCGAGGAG +
Preference number: 2 (lower is better)
Translates to: SEHLVIVADDMGRVFFNLSSSRS*AGRAEE
Trigger: CTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGA...CAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CAA 90 bp AACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTaGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: NCSTGMEPLNKGFRT*QSGTSSLTRFLFFP
Trigger: CGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTATCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLSSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp CAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: QRLQDFAVWYVIAHPLSLHGRDS*QGDARL
Trigger: AAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG...AAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp TCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCCCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 2 (lower is better)
Translates to: SIWVCSGDLGKPCQNKNIPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...GATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR CCA 90 bp TCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: SRSRTLSISSLSQMIWVETAPQG*NRSTKA
Trigger: AGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT...CTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CCA 90 bp ACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 2 (lower is better)
Translates to: TAQQRLQDFAVWYVIAHPVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp TCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: SEHLVIVADDMGRVFFNLSSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...CAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp AAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGATCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 2 (lower is better)
Translates to: KQVLVIFGVQHGRDSCQGSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...TCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp CGGAGGGAAGGGTGCCCGGTGAACACCACACAGGGCTGTCTAAAGTCGTTGCTGTTACTCTGTTTGTTGTaGCAAAGCCACTCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: RREGCPVNTTQGCLKSLLLLCLL*QSHSAK
Trigger: CTTTGCTGAGTGGCTTTGTCACAACAAACAGAGTAA...CAGCAACGACTTTAGACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR GCA 90 bp TCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: STGMEPLNKGFRTLQSGTVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...CGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCCACCTCCGCCTCCCATaGACCTCTTGGAAAACTTCT +
Preference number: 2 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAHLRLP*TSWKTS
Trigger: AGAAGTTTTCCAAGAGGTTCATGGGAGGCGGAGGTG...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp CTGAGCCTTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAAGCCTAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 2 (lower is better)
Translates to: LSLWHSFNEIHQLFHEKPSRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...AGGCTTCTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR-3UTR GCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: DTTKTQLMASHATPQVACVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CCA 90 bp ACAAGGTCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGAGTAGATGCATTTCATaGCCAGCGGCTGGTAAGGAG +
Preference number: 2 (lower is better)
Translates to: TRSRSRTLSISSLSQMIWSRCIS*PAAGKE
Trigger: CTCCTTACCAGCCGCTGGCCATGAAATGCATCTACT...CCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp TCTGAATGTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACTCTTTAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: SECPYSSTRRQTEPLALFRRCQA*SPWAPV
Trigger: CACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCT...AAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp TCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: SEHLVIVADDMGRVFFNLRRCQA*SPWAPV
Trigger: CACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCT...CAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: LPETVLGISPDHFPQEPPVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCG +
Preference number: 2 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHRVCTN*STGMEP
Trigger: CGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCT...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CCA 90 bp TCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCAGCCTCCAGTGCTTGTTATCTTTaGTGTGCAGCACGGCCGAGA +
Preference number: 2 (lower is better)
Translates to: SQMIWVESSSIWMSVSASSACYL*CAARPR
Trigger: TCTCGGCCGTGCTGCACACCAAAGATAACAAGCACT...GGAGGCTGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CAA 90 bp AATTTGAGGACAAGGTCCCGCAGTCGCACTCTGAGCATCTCGTCATaGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGGATGAGC +
Preference number: 2 (lower is better)
Translates to: NLRTRSRSRTLSISS*SQMIWVESSSIWMS
Trigger: GCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGACCTTGTCCTCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp CAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCCGTCATTGTCGCAGATaGTATGGGTCGAGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: QSHSEHLVIVADDMGRVFRHCRR*YGSSLL
Trigger: AAGAAGACTCGACCCATATCATCTGCGACAATGACG...GAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp CAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCAGGTTGAGACTTCCACTGTCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 2 (lower is better)
Translates to: QSSPLALYSIFSRLRLPLSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...CAGTGGAAGTCTCAACCTGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR-3UTR GCA 90 bp AATGTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACTCTTTCAATCCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 2 (lower is better)
Translates to: NVLILPQGGRLSLWHSFNPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...ATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR-3UTR CCA 90 bp TCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCACAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCG +
Preference number: 2 (lower is better)
Translates to: SLSQMIWVESSSIWMSVSQDFAV*YVIAHP
Trigger: CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTG...TGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp CTGGATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCAGGCCGAGGAGGGGGCTaGAGCAAGTGCTTGTTATCT +
Preference number: 2 (lower is better)
Translates to: LDFTKGRVHLLHCIASSPGRGGG*SKCLLS
Trigger: AGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCC...TGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp TCCCACCAGCTGGATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCACTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCC +
Preference number: 2 (lower is better)
Translates to: SHQLDFTKGRVHLLHCIALPLHP*EEKVTA
Trigger: GGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAG...TGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATCCAGCTGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR-3UTR GCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp AGTGAGGGACTGCAGGATTTCAGGGAAGTAGCTCAGATGGCCCACTCAGAACTTGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SEGLQDFREVAQMAHSELERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...AAGTTCTGAGTGGGCCATCTGAGCTACTTCCCTGAAATCCTGCAGTCCCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CCA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAAAGGCTGGCTCCCCTaGCCGAGGCCTGGGACTGAT +
Preference number: 2 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVKGWLP*PRPGTD
Trigger: ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR CCA 90 bp GCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATC +
Preference number: 2 (lower is better)
Translates to: AQQRLQDFAVWYVIAHPLLSQMI*VESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAA...AAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CCA 90 bp CTGAGCCTTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAAGCCTGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 2 (lower is better)
Translates to: LSLWHSFNEIHQLFHEKPVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...AGGCTTCTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR-3UTR CCA 90 bp CAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATCACTCAGCAAAGATCTaGGAAAACTCCAGTGAACTG +
Preference number: 2 (lower is better)
Translates to: QVLVIFGVQHGRDSCQGDHSAKI*ENSSEL
Trigger: CAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTG...ATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR TCA 90 bp CAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: QVLVIFGVQHGRDSCQGDLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...ATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR GCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCGGATCATCATCTTATTaGGTACAGCACTGTAGGCAA +
Preference number: 2 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAGSSSY*VQHCRQ
Trigger: TTGCCTACAGTGCTGTACGCAATAAGATGATGATCC...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR GCA 90 bp AAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGCTCAGAGTAGAAAATaGAGACAGATGGGTTCACTT +
Preference number: 2 (lower is better)
Translates to: KQVLVIFGVQHGRDSCQGAQSRK*RQMGSL
Trigger: AAGTGAACCCATCTGTCTGCATTTTCTACTCTGAGC...TCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR-3UTR TCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 2 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR GCA 90 bp CTGGATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCAGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: LDFTKGRVHLLHCIASSPVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...TGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR CCA 90 bp ATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTTGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: MQTDGFTLPYFGIIILLRWSRTI*PLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCA...ACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR-3UTR TCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGCACCTCCGCCTCCCATaGACCTCTTGGAAAACTTCT +
Preference number: 2 (lower is better)
Translates to: DGFTLPYFGIIILLRTALHLRLP*TSWKTS
Trigger: AGAAGTTTTCCAAGAGGTTCATGGGAGGCGGAGGTG...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR GCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR GCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR TCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACCACCTCCGCCTCCCATaGACCTCTTGGAAAACTTCT +
Preference number: 2 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNHLRLP*TSWKTS
Trigger: AGAAGTTTTCCAAGAGGTTCATGGGAGGCGGAGGTG...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR GCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR CCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTGAAAATGCAGACAGATaGGTTCACTTTACCATATTT +
Preference number: 2 (lower is better)
Translates to: PETVLGISPDHFPQEPPLENADR*VHFTIF
Trigger: AAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR CCA 90 bp GATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCAGGTGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 2 (lower is better)
Translates to: DFTKGRVHLLHCIASSPGGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...ACCTGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR CAA 90 bp GCTCAGAGTAGAAAATGCAGACAGATGGGTTCACTTTACCATATTTaGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAAC +
Preference number: 2 (lower is better)
Translates to: AQSRKCRQMGSLYHI*GSSSYCVQHCRQVN
Trigger: GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTCTACTCTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR GCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR-3UTR CAA 90 bp GACCACGTCCCCGAAGCGGAGGGAAGGGTGCCCGGTGAACACCACACAGGGCTGAAAGGCTTCAGGACTTaGCAGTCTGGTACGTCATCG +
Preference number: 3 (lower is better)
Translates to: DHVPEAEGRVPGEHHTGLKGFRT*QSGTSS
Trigger: CGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTT...CAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTTCGGGGACGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR GCA 72 bp ATGAAGTGGACCACGTCCCCGAAGCGGAGGGAAGGGTaGCCGGTGAACACCACACAGGGCTGTCTAAAGTCG +
Preference number: 3 (lower is better)
Translates to: MKWTTSPKRREG*PVNTTQGCLKS
Trigger: CGACTTTAGACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTTCGGGGACGTGGTCCACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR CCA 72 bp TCAGCCGGGTGTCGATGGGGCAGTAGATGCATTTCATaGCCAGCGGCTGGTAAGGAGCCAGGGCTTCCAGGT +
Preference number: 3 (lower is better)
Translates to: SAGCRWGSRCIS*PAAGKEPGLPG
Trigger: ACCTGGAAGCCCTGGCTCCTTACCAGCCGCTGGCCATGAAATGCATCTACTGCCCCATCGACACCCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR TCA 72 bp GCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTGAATCTGCGAGCTCTG +
Preference number: 3 (lower is better)
Translates to: ARPRQLPRRCQA*SPWAPVNLRAL
Trigger: CAGAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR CCA 72 bp TGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTaGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: CRQVNETKGWLP*PRPGTDARQPA
Trigger: GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACCACCCTCCAGCTCCTaGAGAGAGCCAGAGTTGAGA +
Preference number: 3 (lower is better)
Translates to: VNETKGWLPWPRPGTDARPPSSS*REPELR
Trigger: TCTCAACTCTGGCTCTCTCAAGGAGCTGGAGGGTGG...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATCCACCCTCCAGCTCCTaGAGAGAGCCAGAGTTGAGA +
Preference number: 3 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDPPSSS*REPELR
Trigger: TCTCAACTCTGGCTCTCTCAAGGAGCTGGAGGGTGG...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp TTCTTCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGCACGGCCGAGACAGTaGCCAAGGAGATGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: FFNLDERLSLLEQDDMALARPRQ*PRRCQA
Trigger: AGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC...AAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp GTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCCTGAGCATCTCGTCATaGTCGCAGATGATATGGGTC +
Preference number: 3 (lower is better)
Translates to: VWYVIAHPLSLLPARGLGLSISS*SQMIWV
Trigger: GACCCATATCATCTGCGACAATGACGAGATGCTCAG...GCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR TCA 72 bp GGCTTGATCTCCATGGGCACCAGTGAATCTGCGAGCTaGAAGCAAAGGGCGCAGTTCAGGCTGGGGGCCTTT +
Preference number: 3 (lower is better)
Translates to: GLISMGTSESAS*KQRAQFRLGAF
Trigger: AAAGGCCCCCAGCCTGAACTGCGCCCTTTGCTTTCAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR TCA 72 bp GCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTGAATCTGCGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: ARPRQLPRRCQA*SPWAPVNLRAE
Trigger: TTCAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR CCA 72 bp GCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTaGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: AEEGAEASACYL*CAARPRQLPRR
Trigger: TCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACCTCCCATGAACCTCTaGGAAAACTTCTCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: VNETKGWLPWPRPGTDARPPMNL*ENFSCP
Trigger: GGGACAGGAGAAGTTTTCCAAGAGGTTCATGGGAGG...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp TTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGT +
Preference number: 3 (lower is better)
Translates to: FSRVCTNCSTGMEPLNKGKEMPG*ISMGTS
Trigger: ACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT...GCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CCA 72 bp GTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTaGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGA +
Preference number: 3 (lower is better)
Translates to: VQHCRQVNETKG*LPWPRPGTDAR
Trigger: TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR CCA 72 bp GAGTCTTCTTCAATCTGGATGAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: ESSSIWMSVSAS*SRTIWPLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp CTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGAAGTGCTTGTTATCTTaGGTGTGCAGCACGGCCGAG +
Preference number: 3 (lower is better)
Translates to: LCSLVRHRSPAFSSSRSWKCLLS*VCSTAE
Trigger: CTCGGCCGTGCTGCACACCAAAGATAACAAGCACTT...CCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR TCA 72 bp CAAGGAGATGCCAGGCTTGATCTCCATGGGCACCAGTaGATCTGCGAGCTGAAAGCAAAGGGCGCAGTTCAG +
Preference number: 3 (lower is better)
Translates to: QGDARLDLHGHQ*ICELKAKGAVQ
Trigger: CTGAACTGCGCCCTTTGCTTTCAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR GCA 72 bp CTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTTGATCTCCATGGGCAC +
Preference number: 3 (lower is better)
Translates to: LVIFGVQHGRDS*QGDARLDLHGH
Trigger: GTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR GCA 72 bp TCACTGAAGCCATGCTTCTCCAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCGCTCAACAAAGGCTTC +
Preference number: 3 (lower is better)
Translates to: SLKPCFSRVCTN*STGMEPLNKGF
Trigger: GAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGCATGGCTTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CCA 72 bp GCTTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGT +
Preference number: 3 (lower is better)
Translates to: ASPGSARTAPQG*NRSTKASGLCS
Trigger: ACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp ACAAGGTCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGAGGACGATATGGCCCTaGGCTGTGTCCTCCACCTTA +
Preference number: 3 (lower is better)
Translates to: TRSRSRTLSISSLSQMIWRTIWP*AVSSTL
Trigger: TAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCT...CCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp ATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCCAGTTCACCTCTTGCATaGTATAGCATCTTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: MSVSASWSRTIWPLAVSSSSPLA*YSIFSR
Trigger: CCTGGAGAAGATGCTATACAATGCAAGAGGTGAACT...GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR GCA 72 bp CAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGCTCACCCGCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: QGWNRSTKASGL*SLVRHRSPAFS
Trigger: AGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CCA 72 bp GGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: GTAQQRLQDFAV*YVIAHPLSLLP
Trigger: GGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR CCA 72 bp CACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTGATAGTTAGAGATGAG +
Preference number: 3 (lower is better)
Translates to: HCACEAGVLGDV*QRHHTVIVRDE
Trigger: CTCATCTCTAACTATCACTGTATGATGGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520437.1
3UTR-3UTR CAA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGT +
Preference number: 3 (lower is better)
Translates to: PETVLGISPDHFPQEPPLKEMPG*ISMGTS
Trigger: ACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp GCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTAGCATCTTCTCCAGGTaGAGACTTCCACTGCATCCT +
Preference number: 3 (lower is better)
Translates to: AQQRLQDFAVWYVIAHPLSIFSR*RLPLHP
Trigger: AGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT...AAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR CAA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATCCACCCTCCAGCTCCTaGAGAGAGCCAGAGTTGAGA +
Preference number: 3 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHPPSSS*REPELR
Trigger: TCTCAACTCTGGCTCTCTCAAGGAGCTGGAGGGTGG...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR TCA 72 bp ACAAAGCCACTCAGCAAAGATCTGGGAAAACTCCAGTaGACTGTTGGCCACAGGGGAGATGAAGTAGAGGGG +
Preference number: 3 (lower is better)
Translates to: TKPLSKDLGKLQ*TVGHRGDEVEG
Trigger: CCCCTCTACTTCATCTCCCCTGTGGCCAACAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTGGCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR CCA 72 bp TCTCCCACCATTCCATCTGGGTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTT +
Preference number: 3 (lower is better)
Translates to: SPTIPSGFAVGI*VSPVRTRTSLF
Trigger: AAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGAATGGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR TCA 72 bp CAGAGACATAAGACACTTTCTCGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAAGGGCATAGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: QRHKTLSRNETG*SSWSSQGHSQS
Trigger: GCTCTGGCTATGCCCTTGGGAGCTCCAACTGGATCATCCAGTCTCATTACGAGAAAGTGTCTTATGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
3UTR CCA 72 bp CGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCA +
Preference number: 3 (lower is better)
Translates to: RTLSISSLSQMI*VESSSIWMSVS
Trigger: TGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
3UTR-3UTR CAA 90 bp AAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGTGAATATGACGGTATaGAGACTAGATTTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: KQVLVIFGVQHGRDSCQGVNMTV*RLDFPQ
Trigger: CTGGGGAAAATCTAGTCTCAATACCGTCATATTCAC...TCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522363.5
3UTR-3UTR CAA 90 bp ATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTCCACCCTCCAGCTCCTaGAGAGAGCCAGAGTTGAGA +
Preference number: 3 (lower is better)
Translates to: MQTDGFTLPYFGIIILLRPPSSS*REPELR
Trigger: TCTCAACTCTGGCTCTCTCAAGGAGCTGGAGGGTGG...ACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR TCA 72 bp AGCATCTTCTCCAGGTTGAGACTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCCTCTGAATGTCCTTAT +
Preference number: 3 (lower is better)
Translates to: SIFSRLRLPLHP*EEKVTASECPY
Trigger: ATAAGGACATTCAGAGGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR CCA 72 bp GTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATTCACCAGCTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: VLILPQGGRLSL*HSFNEIHQLFH
Trigger: ATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
3UTR GCA 72 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTaGGTACAGCACTGTAGGCAAGTAAACGAAACCAAA +
Preference number: 3 (lower is better)
Translates to: GSLYHILGSSSY*VQHCRQVNETK
Trigger: TTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp GACCACGTCCCCGAAGCGGAGGGAAGGGTGCCCGGTGAACACCACACAGGGCTGGGGAAGGGTGCCCGGTaGACACCACACAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: DHVPEAEGRVPGEHHTGLGKGAR*TPHRAV
Trigger: GACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCC...CAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTTCGGGGACGTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCTGGGCTGGGGGCGGCTaGGTGTACTGCTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAWAGGG*VYCSGH
Trigger: GTGTCCTGAGCAGTACACTCAGCCGCCCCCAGCCCA...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCGCCGAGGCCTGGGACTaGTGCAAGACAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TKGWLPWPRPGTDARQPAAEAWD*CKTASQ
Trigger: CTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGC...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTTCTTCTTCCCGCTCGTaGGCTGGGCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASSSSRS*AGRAEE
Trigger: CTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGA...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTGCCGAGGCCTGGGACTaGTGCAAGACAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASAEAWD*CKTASQ
Trigger: CTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGC...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCCAGAGCTCCATGAAGTaGACCACGTCCCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAQSSMK*TTSPKR
Trigger: CCGCTTCGGGGACGTGGTCCACTTCATGGAGCTCTG...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCCTGTGGGACTGGGCTaGGGGCGGCTGAGTGTACTG +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASPVGLG*GRLSVL
Trigger: CAGTACACTCAGCCGCCCCCAGCCCAGTCCCACAGG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGGGAAGGGTGCCCGGTaGACACCACACAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQGKGAR*TPHRAV
Trigger: GACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGCTGGCAGTCGATCATaGGGTCCATCCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAAGSRS*GPSCGT
Trigger: AGTCCCACAGGATGGACCTCATGATCGACTGCCAGC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGGCCGAGGAGGGGGCTGGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HPLSLLPARGLGGPRRGLVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...CAGCCCCCTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCTGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSACRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCTGGGCTGGGGGCGGCTaGGTGTACTGCTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGWAGGG*VYCSGH
Trigger: GTGTCCTGAGCAGTACACTCAGCCGCCCCCAGCCCA...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCGCTGGCAGTCGATCATaGGGTCCATCCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: TKGWLPWPRPGTDARQPAAGSRS*GPSCGT
Trigger: AGTCCCACAGGATGGACCTCATGATCGACTGCCAGC...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCCTCCATGGGCACCAGTaGATCTGCGAGCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TKGWLPWPRPGTDARQPALHGHQ*ICELWH
Trigger: ATGCCAGAGCTCGCAGATTCACTGGTGCCCATGGAG...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
CDS-3UTR TCA 90 bp GAGCTCCATGAAGTGGACCACGTCCCCGAAGCGGAGGGAAGGGTGCCCGGTGAACCCGCAGTCGCACTCTaGGCATCTCGTCATTGTCGC +
Preference number: 4 (lower is better)
Translates to: ELHEVDHVPEAEGRVPGEPAVAL*ASRHCR
Trigger: GCGACAATGACGAGATGCTCAGAGTGCGACTGCGGG...TTCACCGGGCACCCTTCCCTCCGCTTCGGGGACGTGGTCCACTTCATGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp TGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTGATCTCCATGGGCATGAGGTCCATCCTGTaGGACTGGGCTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: CSTAETVAKEMPGLISMGMRSIL*DWAGGG
Trigger: GCCGCCCCCAGCCCAGTCCCACAGGATGGACCTCAT...GCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTTCTCGTACCGACGTTTaGAGGGCAGGGCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASSRTDV*RAGREP
Trigger: AGGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGA...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCCACCTCCGCCTCCCATaGACCTCTTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAHLRLP*TSWKTS
Trigger: AGAAGTTTTCCAAGAGGTTCATGGGAGGCGGAGGTG...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGAGTAGAGGGGGACGCTaGAAAGCCCGGCTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQSRGGR*KARLSR
Trigger: TCGACTCAGCCGGGCTTTCCAGCGTCCCCCTCTACT...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGAATGAGGTCCATCCTGTaGGACTGGGCTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARMRSIL*DWAGGG
Trigger: GCCGCCCCCAGCCCAGTCCCACAGGATGGACCTCAT...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATATGAGGTCCATCCTGTaGGACTGGGCTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDMRSIL*DWAGGG
Trigger: GCCGCCCCCAGCCCAGTCCCACAGGATGGACCTCAT...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGTCTTCTTCCCGCTCGTaGGCTGGGCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LCSLVRHRSPAFSSSRSWSSSRS*AGRAEE
Trigger: CTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGA...CCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCCAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: TKGWLPWPRPGTDARQPAQDFAV*YVIAHP
Trigger: CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTG...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSATAPQG*NRSTKA
Trigger: AGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCC +
Preference number: 4 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPSVSAS*SRTIWP
Trigger: GGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCT...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTGATCTCCATGGGCACCAGAAAGGCTGGCTCCCCTaGCCGAGGCCTGGGACTGAT +
Preference number: 4 (lower is better)
Translates to: HGRDSCQGDARLDLHGHQKGWLP*PRPGTD
Trigger: ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT...CTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR CCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGAACGAAACCAAAGGCTaGCTCCCCTGGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQNETKG*LPWPRP
Trigger: AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTT...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: VAYTVPVKPVCSVMYGSASRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...GGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCTGGGAAAACTCCAGTaGACTGTTGGCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASLGKLQ*TVGHRG
Trigger: TCCCCTGTGGCCAACAGTTCACTGGAGTTTTCCCAG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGGCCGAGGAGGGGGCTaGAGCAAGTGCTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQGRGGG*SKCLLS
Trigger: AGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGGCCGCTTCTTCAATCTGGATaGGCGTCTCAGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YVIAHPLSLLPARGLGGPLLQSG*ASQPPG
Trigger: TCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAG...CGGCCCGCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDSSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGGCCGCTGCAGTCTCTGGCATaGTCTCGATCTTCTCGTACC +
Preference number: 4 (lower is better)
Translates to: YVIAHPLSLLPARGLGGPLQSLA*SRSSRT
Trigger: GGTACGAGAAGATCGAGATCATGCCAGAGACTGCAG...CGGCCCGCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR GCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TKGWLPWPRPGTDARQPAVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGTGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQCRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAGCCTGCCGATCTGGACGGTGGGTTCCGTGGCATACACTGTGCCTGTGAAGCCAGAAGCCTGCCGATCTaGACGGTGGGTTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: KPADLDGGFRGIHCACEARSLPI*TVGSVA
Trigger: TGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCT...GGCTTCACAGGCACAGTGTATGCCACGGAACCCACCGTCCAGATCGGCAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGCTTGGTCCATGGGCTaGGGGTGTGTGGTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQAWSMG*GCVVSK
Trigger: CTTGCTTACCACACACCCCCAGCCCATGGACCAAGC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCCAGAGCTCCATGAAGTaGACCACGTCCCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VAYTVPVKPVCSVMYGSAQSSMK*TTSPKR
Trigger: CCGCTTCGGGGACGTGGTCCACTTCATGGAGCTCTG...GGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCC +
Preference number: 4 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGSVSAS*SRTIWP
Trigger: GGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCT...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACAAGGAGGCAGACTaGGCCTTTGGCACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASHKEAD*AFGTLS
Trigger: TGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASLPLHP*EEKVTA
Trigger: GGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGAACATCGCTGTTTTTaGGAGAAGCTTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAEHRCF*EKLGPW
Trigger: CCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGIHCACEAGVLGDVWQRPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...GCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR GCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCTGTCAGAGCTAGGTTaGTGCAGAACTCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASLSELG*CRTLPP
Trigger: TGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGACAG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGGTCTGAATGAGCTCTaGATGAGGAAAAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAGLNEL*MRKRWF
Trigger: GAACCACCTTTTCCTCATGCAGAGCTCATTCAGACC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp ACGGTGGGTTCCGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: TVGSVAYTVPVKPVCSVMCRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...CATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCACGGAACCCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTTCCCACCATTCCATCTaGGTTTGCAGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASSHHSI*VCSGDL
Trigger: CAGATCCCCACTGCAAACCCAGATGGAATGGTGGGA...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGCCTGTGGGACTGGGCTaGGGGCGGCTGAGTGTACTG +
Preference number: 4 (lower is better)
Translates to: SRSRTLSISSLSQMIWVEPVGLG*GRLSVL
Trigger: CAGTACACTCAGCCGCCCCCAGCCCAGTCCCACAGG...CTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCTTCTTCCCGCTCGTaGGCTGGGCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGSSSRS*AGRAEE
Trigger: CTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCTTCTTCCCGCTCGTaGGCTGGGCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: STGMEPLNKGFRTLQSGTSSSRS*AGRAEE
Trigger: CTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGA...CGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp ATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCCTGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MSVSASWSRTIWPLAVSSWSRTI*PLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCA...GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGGCCGAGGAGGGGGCTGTTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: HPLSLLPARGLGGPRRGLLSQMI*VESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAA...CAGCCCCCTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTGATCTCCATGGGCTCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: CSTAETVAKEMPGLISMGSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...GCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCTGAGTCGATGTACTaGTATAGGCACTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPAESMY*YRHSRR
Trigger: CCTCCTGGAGTGCCTATATCAGTACATCGACTCAGC...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGCTTATTGGTCTGAATaGGCTCTGCATGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAAYWSE*ALHEEK
Trigger: CTTTTCCTCATGCAGAGCTCATTCAGACCAATAAGC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCGGGAAGGGTGCCCGGTaGACACCACACAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGGKGAR*TPHRAV
Trigger: GACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCC...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGGGCTGGGGGCGGCTaGGTGTACTGCTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVAWAGGG*VYCSGH
Trigger: GTGTCCTGAGCAGTACACTCAGCCGCCCCCAGCCCA...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTGGGCTGGGGGCGGCTaGGTGTACTGCTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGWAGGG*VYCSGH
Trigger: GTGTCCTGAGCAGTACACTCAGCCGCCCCCAGCCCA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGATCTCGTACCGACGTTTaGAGGGCAGGGCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARSRTDV*RAGREP
Trigger: AGGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGA...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGGCCGACTTCTGTAAGAATTTaGGGACAAGGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: YVIAHPLSLLPARGLGGPTSVRI*GQGPAV
Trigger: GACTGCGGGACCTTGTCCTCAAATTCTTACAGAAGT...CGGCCCGCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTGCCGAGGCCTGGGACTaGTGCAAGACAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AQQRLQDFAVWYVIAHPLAEAWD*CKTASQ
Trigger: CTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGC...AAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR TCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGAGTGAATCTGCGAGCTaGAAGCAAAGGGCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQSESAS*KQRAQF
Trigger: GAACTGCGCCCTTTGCTTTCAGCTCGCAGATTCACT...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR TCA 90 bp CACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTGATCTCCATGGGCACCAGCTCCATGGGCACCAGTaGATCTGCGAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HGRDSCQGDARLDLHGHQLHGHQ*ICELKA
Trigger: TGCTTTCAGCTCGCAGATTCACTGGTGCCCATGGAG...CTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR TCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCAATACTTTGCCCTCTaGCCTAGGAGCGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASQYFAL*PRSEDS
Trigger: TGAGTCTTCGCTCCTAGGTCAGAGGGCAAAGTATTG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521777.5
CDS-3UTR GCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCTGTCAGAGCTAGGTTaGTGCAGAACTCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQLSELG*CRTLPP
Trigger: TGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGACAG...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARHGRDS*QGDARL
Trigger: AAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTCCCCTCCAGGCATCATaGGAACTGTGGTCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPPLQAS*ELWSPF
Trigger: GAAAGGCGACCACAGTTCCCATGATGCCTGGAGGGG...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR CCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTACCAGCCAGGAAGATTaGACAGCCTGGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASTSQED*TAWDFE
Trigger: TTCAAAGTCCCAGGCTGTCCAATCTTCCTGGCTGGT...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASFAVGI*VSPVRT
Trigger: TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGTCCCACCATTCCATCTaGGTTTGCAGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQSHHSI*VCSGDL
Trigger: CAGATCCCCACTGCAAACCCAGATGGAATGGTGGGA...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAAGCAGCTTTGACACCTaGATGAAGTTCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPSSFDT*MKFSRV
Trigger: CACCCGGCTGAACTTCATCCAGGTGTCAAAGCTGCT...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCCTGTGGGACTGGGCTaGGGGCGGCTGAGTGTACTG +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVAPVGLG*GRLSVL
Trigger: CAGTACACTCAGCCGCCCCCAGCCCAGTCCCACAGG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCATGAGGTCCATCCTGTaGGACTGGGCTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGMRSIL*DWAGGG
Trigger: GCCGCCCCCAGCCCAGTCCCACAGGATGGACCTCAT...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGTCTTCTTCCCGCTCGTaGGCTGGGCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACESSSRS*AGRAEE
Trigger: CTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGA...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQTAPQG*NRSTKA
Trigger: AGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPTAPQG*NRSTKA
Trigger: AGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTTCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCAAAAGCTCAATTTTCTaGGAATATCCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAKSSIF*EYPTSW
Trigger: CCAGCTGGTGGGATATTCTCAGAAAATTGAGCTTTT...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCACGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPRNETG*SSWSSQ
Trigger: TTGGGAGCTCCAACTGGATCATCCAGTCTCATTACG...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATCTGGGAAAACTCCAGTaGACTGTTGGCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDLGKLQ*TVGHRG
Trigger: TCCCCTGTGGCCAACAGTTCACTGGAGTTTTCCCAG...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGGGAAGGGTGCCCGGTaGACACCACACAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QVLVIFGVQHGRDSCQGDGKGAR*TPHRAV
Trigger: GACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCC...ATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGSSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LHELLHRDGTAQQRLQDFSSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...AAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CGAGCTGAAAGCAAAGGGCGCAGTTCAGGCTGGGGGCCTTTAATGATGACCATTTCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RAESKGRSSGWGPLMMTISSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...AATGGTCATCATTAAAGGCCCCCAGCCTGAACTGCGCCCTTTGCTTTCAGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR GCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACGATGGGGCAGTAGATaGATTTCATGGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARRWGSR*ISWPAA
Trigger: AGCCGCTGGCCATGAAATGCATCTACTGCCCCATCG...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCCTGTATTTACATCACTaGAGTCTCTGGCATGATCTC +
Preference number: 4 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSALYLHH*SLWHDL
Trigger: GAGATCATGCCAGAGACTGCAGTGATGTAAATACAG...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR CCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTGAAGATTGGACAGCCTaGGACTTTGAACAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASEDWTA*DFEQVA
Trigger: TGCCACTTGTTCAAAGTCCCAGGCTGTCCAATCTTC...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCCAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: LQSGTSSLTRFLFFPLVGQDFAV*YVIAHP
Trigger: CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTG...GCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp ATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCCACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MSVSASWSRTIWPLAVSSTAPQG*NRSTKA
Trigger: AGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT...GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTAAAGGCTGGCTCCCCTaGCCGAGGCCTGGGACTGAT +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVAKGWLP*PRPGTD
Trigger: ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR CAA 72 bp AGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGTGAATCTGCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: STAETVAKEMPG*ISMGTSESASS
Trigger: AGAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: STGMEPLNKGFRTLQSGTSRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...CGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGCTGAGTCGATGTACTaGTATAGGCACTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPAESMY*YRHSRR
Trigger: CCTCCTGGAGTGCCTATATCAGTACATCGACTCAGC...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTCCCCAGAGCTCCATaGAGTGGACCACGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGFPRAP*SGPRPR
Trigger: TCGGGGACGTGGTCCACTTCATGGAGCTCTGGGGAA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTGGGCTGGGGGCGGCTaGGTGTACTGCTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLWAGGG*VYCSGH
Trigger: GTGTCCTGAGCAGTACACTCAGCCGCCCCCAGCCCA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LLSLVCSTAETVAKEMPGRRCQA*SPWAPV
Trigger: CACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCT...GCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATCTGTCAGAGCTAGGTTaGTGCAGAACTCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDLSELG*CRTLPP
Trigger: TGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGACAG...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGGTCTGAATGAGCTCTaGATGAGGAAAAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQGLNEL*MRKRWF
Trigger: GAACCACCTTTTCCTCATGCAGAGCTCATTCAGACC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAAAGCGGAGGGAAGGGTaGCCGGTGAACACCACACAG +
Preference number: 4 (lower is better)
Translates to: CLLSLVCSTAETVAKEMPKRREG*PVNTTQ
Trigger: CTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTT...TGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCCGATGGGGCAGTAGATaGATTTCATGGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: FSRVCTNCSTGMEPLNKGRWGSR*ISWPAA
Trigger: AGCCGCTGGCCATGAAATGCATCTACTGCCCCATCG...GCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTTCAGGACACACCACGTaGAGGGGCTGCACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPSGHTT*RGCTSL
Trigger: TAAAGAAGTGCAGCCCCTGCACGTGGTGTGTCCTGA...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGAGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GTCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGATGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: VPQSHSEHLVIVADDMGRCRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...TCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: TKGWLPWPRPGTDARQPAGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCGCTTGGTCCATGGGCTaGGGGTGTGTGGTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLSLVCSTAETVAKEMPGAWSMG*GCVVSK
Trigger: CTTGCTTACCACACACCCCCAGCCCATGGACCAAGC...GCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTAGTAGAGGGGGACGCTaGAAAGCCCGGCTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVASRGGR*KARLSR
Trigger: TCGACTCAGCCGGGCTTTCCAGCGTCCCCCTCTACT...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTAGTAGAGGGGGACGCTaGAAAGCCCGGCTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: LHELLHRDGTAQQRLQDFSRGGR*KARLSR
Trigger: TCGACTCAGCCGGGCTTTCCAGCGTCCCCCTCTACT...AAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACTCAGCAAAGATCTaGGAAAACTCCAGTGAACTG +
Preference number: 4 (lower is better)
Translates to: KGWLPWPRPGTDARQPASHSAKI*ENSSEL
Trigger: CAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GATCTGGACGGTGGGTTCCGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCAGTCTCCGTGGATGCTaGGGTAGTGCTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: DLDGGFRGIHCACEAGVLSLRGC*GSASAY
Trigger: ATAAGCTGAAGCACTACCCCAGCATCCACGGAGACT...GAGCACACCGGCTTCACAGGCACAGTGTATGCCACGGAACCCACCGTCCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATAGCAGCTTTGACACCTaGATGAAGTTCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDSSFDT*MKFSRV
Trigger: CACCCGGCTGAACTTCATCCAGGTGTCAAAGCTGCT...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCCTGTGGGACTGGGCTaGGGGCGGCTGAGTGTACTG +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPPVGLG*GRLSVL
Trigger: CAGTACACTCAGCCGCCCCCAGCCCAGTCCCACAGG...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCC +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGSVSAS*SRTIWP
Trigger: GGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCT...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMASRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: SIWVCSGDLGKPCQNKNISRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...GATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCGAACATCGCTGTTTTTaGGAGAAGCTTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGEHRCF*EKLGPW
Trigger: CCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTC...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCCACCATTCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACACTGGGAAAACTCCAGTaGACTGTTGGCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: PTIPSGFAVGIWVSPVRTLGKLQ*TVGHRG
Trigger: TCCCCTGTGGCCAACAGTTCACTGGAGTTTTCCCAG...TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGAATGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp GTCTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTCTGGGAAAACTCCAGTaGACTGTTGGCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: VCTNCSTGMEPLNKGFRTLGKLQ*TVGHRG
Trigger: TCCCCTGTGGCCAACAGTTCACTGGAGTTTTCCCAG...AGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCGCTGGCAGTCGATCATaGGGTCCATCCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGAGSRS*GPSCGT
Trigger: AGTCCCACAGGATGGACCTCATGATCGACTGCCAGC...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TTCTTCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGCTGGCAGTCGATCATaGGGTCCATCCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: FFNLDERLSLLEQDDMALAGSRS*GPSCGT
Trigger: AGTCCCACAGGATGGACCTCATGATCGACTGCCAGC...AAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGTGTGTGGTAAGCAAGTCTCGTACCGACGTTTaGAGGGCAGGGCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: SLFLREAWSMGWGCVVSKSRTDV*RAGREP
Trigger: AGGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGA...CTTGCTTACCACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCTCCATGGGCACCAGTaGATCTGCGAGCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVALHGHQ*ICELWH
Trigger: ATGCCAGAGCTCGCAGATTCACTGGTGCCCATGGAG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCCTCCATGGGCACCAGTaGATCTGCGAGCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGLHGHQ*ICELWH
Trigger: ATGCCAGAGCTCGCAGATTCACTGGTGCCCATGGAG...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
CDS-3UTR TCA 90 bp TGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCCGAGGAGGGGGCTaGAGCAAGTGCTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: CLLSLVCSTAETVAKEMPGRGGG*SKCLLS
Trigger: AGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCC...TGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTCCCGCAGTCGCACTCTaGGCATCTCGTCATTGTCGC +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACPAVAL*ASRHCR
Trigger: GCGACAATGACGAGATGCTCAGAGTGCGACTGCGGG...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCACCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLLSLVCSTAETVAKEMPPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...TGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTTCAGAGCTAGGTTGCTaGAGAACTCTCCCACCATTC +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPSELGC*RTLPPF
Trigger: GAATGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGA...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVAHGRDS*QGDARL
Trigger: AAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GATCTGGACGGTGGGTTCCGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCTTGTTATCTTTGGTGTaGAGCACGGCCGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: DLDGGFRGIHCACEAGVLLLSLV*STAETV
Trigger: AACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA...GAGCACACCGGCTTCACAGGCACAGTGTATGCCACGGAACCCACCGTCCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGAAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGC +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARKASGL*SLVRHR
Trigger: GCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVACRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCAGAAGCCTGCCGATCTaGACGGTGGGTTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMARSLPI*TVGSVA
Trigger: TGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCT...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GGTTCCGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: GSVAYTVPVKPVCSVMYGFAVGI*VSPVRT
Trigger: TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA...GCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCACGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp GTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCCACTCAGCAAAGATCTaGGAAAACTCCAGTGAACTG +
Preference number: 4 (lower is better)
Translates to: VWYVIAHPLSLLPARGLGHSAKI*ENSSEL
Trigger: CAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTG...GCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTCAGAGCTCCATGAAGTaGACCACGTCCCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACQSSMK*TTSPKR
Trigger: CCGCTTCGGGGACGTGGTCCACTTCATGGAGCTCTG...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGWSRTI*PLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCC +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACSVSAS*SRTIWP
Trigger: GGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAAAGGCTGGCTCCCCTaGCCGAGGCCTGGGACTGAT +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLKGWLP*PRPGTD
Trigger: ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPSRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLSRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTTCCCCAGAGCTCCATaGAGTGGACCACGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLFPRAP*SGPRPR
Trigger: TCGGGGACGTGGTCCACTTCATGGAGCTCTGGGGAA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTCTCGTACCGACGTTTaGAGGGCAGGGCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: QSHSEHLVIVADDMGRVFSRTDV*RAGREP
Trigger: AGGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGA...GAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCCTGCGAGCTCTGGCATaGTCTCGATCTTCTCGTACC +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGLRALA*SRSSRT
Trigger: GGTACGAGAAGATCGAGATCATGCCAGAGCTCGCAG...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
CDS-3UTR TCA 90 bp GCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTCTGCGAGCTCTGGCATaGTCTCGATCTTCTCGTACC +
Preference number: 4 (lower is better)
Translates to: AQQRLQDFAVWYVIAHPLLRALA*SRSSRT
Trigger: GGTACGAGAAGATCGAGATCATGCCAGAGCTCGCAG...AAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMARRCQA*SPWAPV
Trigger: CACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCT...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACGTCATTGTCGCAGATaGTATGGGTCGAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARRHCRR*YGSSLL
Trigger: AAGAAGACTCGACCCATATCATCTGCGACAATGACG...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACECEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCAGCCTCCTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: SQMIWVESSSIWMSVSASCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...GGAGGCTGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGAATCCACAAATACATaGCCCGAGCACTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPESTNT*PEHSFS
Trigger: GCTAAAGGAGTGCTCGGGTCATGTATTTGTGGATTC...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGCCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRTRTSLFLREAWSMGWGPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...CCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR GCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCAAGCGGAGGGAAGGGTaGCCGGTGAACACCACACAG +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLKRREG*PVNTTQ
Trigger: CTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTT...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCCACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAHGRDS*QGDARL
Trigger: AAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGATTGTTATCTTTGGTGTaGAGCACGGCCGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARLLSLV*STAETV
Trigger: AACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCG +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACRVCTN*STGMEP
Trigger: CGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGGATCATCATCTTATTaGGTACAGCACTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQGSSSY*VQHCRQ
Trigger: TTGCCTACAGTGCTGTACGCAATAAGATGATGATCC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAGAAGCCTGCCGATCTaGACGGTGGGTTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLRSLPI*TVGSVA
Trigger: TGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGAGAAGCCTGCCGATCTaGACGGTGGGTTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: PCQNKNIAVFERSLVHGLRSLPI*TVGSVA
Trigger: TGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCT...CAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGCTTGGTCCATGGGCTaGGGGTGTGTGGTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACAWSMG*GCVVSK
Trigger: CTTGCTTACCACACACCCCCAGCCCATGGACCAAGC...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTCCCACCATTCCATCTaGGTTTGCAGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: LLSLVCSTAETVAKEMPGSHHSI*VCSGDL
Trigger: CAGATCCCCACTGCAAACCCAGATGGAATGGTGGGA...GCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCACTCAGCAAAGATCTaGGAAAACTCCAGTGAACTG +
Preference number: 4 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGHSAKI*ENSSEL
Trigger: CAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTG...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGAGTCTCCGTGGATGCTaGGGTAGTGCTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: LCSLVRHRSPAFSSSRSWSLRGC*GSASAY
Trigger: ATAAGCTGAAGCACTACCCCAGCATCCACGGAGACT...CCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCTGTGGGACTGGGCTaGGGGCGGCTGAGTGTACTG +
Preference number: 4 (lower is better)
Translates to: SSYCVQHCRQVNETKGWLPVGLG*GRLSVL
Trigger: CAGTACACTCAGCCGCCCCCAGCCCAGTCCCACAGG...GAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTAGTGCTTGTTATCTTTaGTGTGCAGCACGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SIWMSVSASWSRTIWPLASACYL*CAARPR
Trigger: TCTCGGCCGTGCTGCACACCAAAGATAACAAGCACT...AGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGTGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YCVQHCRQVNETKGWLPWWSRTI*PLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCA...CCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGTGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACEWSRTI*PLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCA...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCC +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLSVSAS*SRTIWP
Trigger: GGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTAGCGTCTCAGCCTCCTaGAGCAGGACGATATGGCCC +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPSVSAS*SRTIWP
Trigger: GGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCT...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCAACGAAACCAAAGGCTaGCTCCCCTGGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLNETKG*LPWPRP
Trigger: AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTT...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
3UTR CAA 72 bp ACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTaGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TGMEPLNKGFRT*QSGTSSLTRFL
Trigger: GAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTTTCAATAGCAGTCACTaGACTCCTCAAACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPFNSSH*TPQTQE
Trigger: TTCCTGGGTTTGAGGAGTTCAGTGACTGCTATTGAA...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416984.6
ENST00000521022.6
CDS-3UTR TCA 90 bp CGAGCTGAAAGCAAAGGGCGCAGTTCAGGCTGGGGGCCTTTAATGATGACCATTCACAAGGAGGCAGACTaGGCCTTTGGCACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RAESKGRSSGWGPLMMTIHKEAD*AFGTLS
Trigger: TGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTG...AATGGTCATCATTAAAGGCCCCCAGCCTGAACTGCGCCCTTTGCTTTCAGCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR TCA 90 bp GGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCATGAAGGTAACAGCCTCTaGATGTCCTTATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GIHCACEAGVLGDVWQRHEGNSL*MSLFFH
Trigger: GTGGAAGAATAAGGACATTCAGAGGCTGTTACCTTC...ATGGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGAAGGTAACAGCCTCTaGATGTCCTTATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPEGNSL*MSLFFH
Trigger: GTGGAAGAATAAGGACATTCAGAGGCTGTTACCTTC...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGAGAAGGTAACAGCCTCTaGATGTCCTTATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDAREGNSL*MSLFFH
Trigger: GTGGAAGAATAAGGACATTCAGAGGCTGTTACCTTC...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGGGAAGGGTGCCCGGTaGACACCACACAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEGKGAR*TPHRAV
Trigger: GACAGCCCTGTGTGGTGTTCACCGGGCACCCTTCCC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTATTCCCCAGAGCTCCATaGAGTGGACCACGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLFPRAP*SGPRPR
Trigger: TCGGGGACGTGGTCCACTTCATGGAGCTCTGGGGAA...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGCTCCATGGGCACCAGTaGATCTGCGAGCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PVRTRTSLFLREAWSMGWLHGHQ*ICELWH
Trigger: ATGCCAGAGCTCGCAGATTCACTGGTGCCCATGGAG...CCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTGGCCGAGGAGGGGGCTaGAGCAAGTGCTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPGRGGG*SKCLLS
Trigger: AGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCC...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CAGGAGGTCATAGATCACTCCAGAAGGGTAGCAGGGAACCAACACGTTTCCTCCCTTCTTCAATCTGGATaGGCGTCTCAGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QEVIDHSRRVAGNQHVSSLLQSG*ASQPPG
Trigger: TCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAG...GGAGGAAACGTGTTGGTTCCCTGCTACCCTTCTGGAGTGATCTATGACCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCCACCTCCGCCTCCCATaGACCTCTTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGHLRLP*TSWKTS
Trigger: AGAAGTTTTCCAAGAGGTTCATGGGAGGCGGAGGTG...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCAGACTGCACATCTGTaGGATCTTCTCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVAQTAHL*DLLQGL
Trigger: CAGACCCTGGAGAAGATCTCACAGATGTGCAGTCTG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS-3UTR GCA 90 bp GTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCCATGGTAAGGTTGGGTaGCCTGACAGGCAATACAGT +
Preference number: 4 (lower is better)
Translates to: VLVIFGVQHGRDSCQGDAHGKVG*PDRQYS
Trigger: ACTGTATTGCCTGTCAGGGCACCCAACCTTACCATG...GGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR GCA 90 bp GTCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGATCAGAGCTAGGTTGCTaGAGAACTCTCCCACCATTC +
Preference number: 4 (lower is better)
Translates to: VPQSHSEHLVIVADDMGRSELGC*RTLPPF
Trigger: GAATGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGA...TCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGCGATGGGGCAGTAGATaGATTTCATGGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACERWGSR*ISWPAA
Trigger: AGCCGCTGGCCATGAAATGCATCTACTGCCCCATCG...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTCGATGGGGCAGTAGATaGATTTCATGGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACRWGSR*ISWPAA
Trigger: AGCCGCTGGCCATGAAATGCATCTACTGCCCCATCG...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCG +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLRVCTN*STGMEP
Trigger: CGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GGCAGACTGAGCCTTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAGAAGCCTGCCGATCTaGACGGTGGGTTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRLSLWHSFNEIHQLFHERSLPI*TVGSVA
Trigger: TGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCT...CTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCGCTTGGTCCATGGGCTaGGGGTGTGTGGTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLAWSMG*GCVVSK
Trigger: CTTGCTTACCACACACCCCCAGCCCATGGACCAAGC...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCCCACCATTCCATCTaGGTTTGCAGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGSHHSI*VCSGDL
Trigger: CAGATCCCCACTGCAAACCCAGATGGAATGGTGGGA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCAGTAGAGGGGGACGCTaGAAAGCCCGGCTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: LGKPCQNKNIAVFERSLVSRGGR*KARLSR
Trigger: TCGACTCAGCCGGGCTTTCCAGCGTCCCCCTCTACT...GACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp ATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCCAGGAAAAGGTGGTTCTaGAAGATACACCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: MSVSASWSRTIWPLAVSSRKRWF*KIHLTL
Trigger: CAGAGTAAGGTGTATCTTCCAGAACCACCTTTTCCT...GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGAGTAGATGCATTTCATaGCCAGCGGCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SRSRTLSISSLSQMIWVESRCIS*PAAGKE
Trigger: CTCCTTACCAGCCGCTGGCCATGAAATGCATCTACT...CTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCAGCCGGGTGTCGATaGGGCAGTAGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGSAGCR*GSRCIS
Trigger: TGAAATGCATCTACTGCCCCATCGACACCCGGCTGA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GTGTGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGAGAATGAGGTCCATCCTGTaGGACTGGGCTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VCGKQGGSRDIRHFLVMRMRSIL*DWAGGG
Trigger: GCCGCCCCCAGCCCAGTCCCACAGGATGGACCTCAT...TCTCATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAAACGAAACCAAAGGCTaGCTCCCCTGGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLNETKG*LPWPRP
Trigger: AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTT...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCCATCACTGCAGTCTCTaGCATGATCTCGATCTTCTC +
Preference number: 4 (lower is better)
Translates to: FSRVCTNCSTGMEPLNKGHHCSL*HDLDLL
Trigger: GAGAAGATCGAGATCATGCCAGAGACTGCAGTGATG...GCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
3UTR CAA 72 bp TGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTaGAGAGAAGCTTGGTCCATGGGCTGGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WVSPVRTRTSLF*REAWSMGWGCV
Trigger: CACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTTCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTCTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACLPLHP*EEKVTA
Trigger: GGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAG...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVARNETG*SSWSSQ
Trigger: TTGGGAGCTCCAACTGGATCATCCAGTCTCATTACG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTTATTGGTCTGAATaGGCTCTGCATGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LCSLVRHRSPAFSSSRSWAYWSE*ALHEEK
Trigger: CTTTTCCTCATGCAGAGCTCATTCAGACCAATAAGC...CCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GGCAGACTGAGCCTTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGGGCCGAGGAGGGGGCTaGAGCAAGTGCTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: GRLSLWHSFNEIHQLFHEGRGGG*SKCLLS
Trigger: AGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCC...CTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCCTTCTTCAATCTGGATaGGCGTCTCAGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMALLQSG*ASQPPG
Trigger: TCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAG...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCCACCATTCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACACGTCATTGTCGCAGATaGTATGGGTCGAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PTIPSGFAVGIWVSPVRTRHCRR*YGSSLL
Trigger: AAGAAGACTCGACCCATATCATCTGCGACAATGACG...TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGAATGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCACCCGCAGTCGCACTCTaGGCATCTCGTCATTGTCGC +
Preference number: 4 (lower is better)
Translates to: SLSQMIWVESSSIWMSVSPAVAL*ASRHCR
Trigger: GCGACAATGACGAGATGCTCAGAGTGCGACTGCGGG...TGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAATCCTCAGGTGGCTTGTaGGGGCAGCCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWESSGGL*GQPVRD
Trigger: GTCCCTCACTGGCTGCCCTCACAAGCCACCTGAGGA...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCGGAAGCGTCTTCCGGTaGAATCTCCGCCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSYCVQHCRQVNETKGWLGSVFR*NLRHLP
Trigger: TGGCAGGTGGCGGAGATTGCACCGGAAGACGCTTCC...GAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416984.6
ENST00000521022.6
CDS-3UTR GCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCGATGGGGCAGTAGATaGATTTCATGGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLRWGSR*ISWPAA
Trigger: AGCCGCTGGCCATGAAATGCATCTACTGCCCCATCG...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATTCAGGACACACCACGTaGAGGGGCTGCACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: QVLVIFGVQHGRDSCQGDSGHTT*RGCTSL
Trigger: TAAAGAAGTGCAGCCCCTGCACGTGGTGTGTCCTGA...ATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp AAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KPCQNKNIAVFERSLVHGHGRDS*QGDARL
Trigger: AAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG...CCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp CAGGAGGTCATAGATCACTCCAGAAGGGTAGCAGGGAACCAACACGTTTCCTCCAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGC +
Preference number: 4 (lower is better)
Translates to: QEVIDHSRRVAGNQHVSSKASGL*SLVRHR
Trigger: GCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT...GGAGGAAACGTGTTGGTTCCCTGCTACCCTTCTGGAGTGATCTATGACCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp AAGGTAACAGCCTCTGAATGTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCG +
Preference number: 4 (lower is better)
Translates to: KVTASECPYSSTRRQTEPRVCTN*STGMEP
Trigger: CGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCT...AGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATTCAGAGGCTGTTACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp AGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTGAAGATTGGACAGCCTaGGACTTTGAACAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RGLKQVLVIFGVQHGRDSEDWTA*DFEQVA
Trigger: TGCCACTTGTTCAAAGTCCCAGGCTGTCCAATCTTC...ACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR CCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACEVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCATGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: GIHCACEAGVLGDVWQRHGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...ATGGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CCA 90 bp TTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGGCTTGGTCCATGGGCTaGGGGTGTGTGGTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: FAVGIWVSPVRTRTSLFLAWSMG*GCVVSK
Trigger: CTTGCTTACCACACACCCCCAGCCCATGGACCAAGC...CAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CCA 90 bp AGTGAGGGACTGCAGGATTTCAGGGAAGTAGCTCAGATGGCCCACTCAGAACTTTCCCACCATTCCATCTaGGTTTGCAGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: SEGLQDFREVAQMAHSELSHHSI*VCSGDL
Trigger: CAGATCCCCACTGCAAACCCAGATGGAATGGTGGGA...AAGTTCTGAGTGGGCCATCTGAGCTACTTCCCTGAAATCCTGCAGTCCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATAGTAGAGGGGGACGCTaGAAAGCCCGGCTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHSRGGR*KARLSR
Trigger: TCGACTCAGCCGGGCTTTCCAGCGTCCCCCTCTACT...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGAAGGAAAAGGTGGTTCTaGAAGATACACCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: VNETKGWLPWPRPGTDARRKRWF*KIHLTL
Trigger: CAGAGTAAGGTGTATCTTCCAGAACCACCTTTTCCT...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTAGCAGCTTTGACACCTaGATGAAGTTCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACSSFDT*MKFSRV
Trigger: CACCCGGCTGAACTTCATCCAGGTGTCAAAGCTGCT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCAGTGCTTGTTATCTTTaGTGTGCAGCACGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGSACYL*CAARPR
Trigger: TCTCGGCCGTGCTGCACACCAAAGATAACAAGCACT...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTATGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLWSRTI*PLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCA...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTTTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPLSQMI*VESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAA...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGACCAGCCAGGAAGATTaGACAGCCTGGGACAGTTTC +
Preference number: 4 (lower is better)
Translates to: VRTRTSLFLREAWSMGWGTSQED*TAWDSF
Trigger: GAAACTGTCCCAGGCTGTCCAATCTTCCTGGCTGGT...CCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp GGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGAGACTGGATAGCCGGTGTGCTCGGTaGTGTATGGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: GKQGGSRDIRHFLVMRLDSRCAR*CMAAPS
Trigger: TGATGGCGCTGCCATACATCACCGAGCACACCGGCT...ATCCAGTCTCATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp GTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTTCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: VCSGDLGKPCQNKNIAVFSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...AAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCCTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLLPLHP*EEKVTA
Trigger: GGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAG...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTGAACATCGCTGTTTTTaGGAGAAGCTTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVAEHRCF*EKLGPW
Trigger: CCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTC...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CTCGTAATGAGACTGGATGATCCAGTTGGAGCTCCCAAGGGCATAGCCAGAGCTGAACATCGCTGTTTTTaGGAGAAGCTTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LVMRLDDPVGAPKGIARAEHRCF*EKLGPW
Trigger: CCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTC...AGCTCTGGCTATGCCCTTGGGAGCTCCAACTGGATCATCCAGTCTCATTACGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCGCTGAGTCGATGTACTaGTATAGGCACTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLAESMY*YRHSRR
Trigger: CCTCCTGGAGTGCCTATATCAGTACATCGACTCAGC...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCTTCAATCTGGATaGGCGTCTCAGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPLLQSG*ASQPPG
Trigger: TCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAG...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCGTCATTGTCGCAGATaGTATGGGTCGAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EDTTKTQLMASHATPQVARHCRR*YGSSLL
Trigger: AAGAAGACTCGACCCATATCATCTGCGACAATGACG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAACCCGCAGTCGCACTCTaGGCATCTCGTCATTGTCGC +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEPAVAL*ASRHCR
Trigger: GCGACAATGACGAGATGCTCAGAGTGCGACTGCGGG...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGGCAATCTCCGCCACCTaGCAGCCGAGAGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRAISAT*QPRASR
Trigger: CCGCGATGCTCTCGGCTGGCAGGTGGCGGAGATTGC...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR GCA 90 bp TCCCACCAGCTGGATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCACCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: SHQLDFTKGRVHLLHCIAPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...TGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATCCAGCTGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR GCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCAGAGCTAGGTTGCTaGAGAACTCTCCCACCATTC +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMASELGC*RTLPPF
Trigger: GAATGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGA...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGAGACTGAAGCGGAGGGAAGGGTaGCCGGTGAACACCACACAG +
Preference number: 4 (lower is better)
Translates to: CGKQGGSRDIRHFLVMRLKRREG*PVNTTQ
Trigger: CTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTT...CAGTCTCATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTTATCTTTGGTGTaGAGCACGGCCGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGLLSLV*STAETV
Trigger: AACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTTGTTATCTTTGGTGTaGAGCACGGCCGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: AQQRLQDFAVWYVIAHPLLLSLV*STAETV
Trigger: AACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA...AAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGC +
Preference number: 4 (lower is better)
Translates to: QRLQDFAVWYVIAHPLSLKASGL*SLVRHR
Trigger: GCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT...AAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTGTGGGCTGGGCAGACTaGACATCTGTGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPVGWAD*TSVRSS
Trigger: AGAAGATCTCACAGATGTGCAGTCTGCCCAGCCCAC...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS-3UTR CCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTACCAGCCAGGAAGATTaGACAGCCTGGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACTSQED*TAWDFE
Trigger: TTCAAAGTCCCAGGCTGTCCAATCTTCCTGGCTGGT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGAGAAGCCTGCCGATCTaGACGGTGGGTTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWRSLPI*TVGSVA
Trigger: TGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCT...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp CTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: LCSLVRHRSPAFSSSRSWGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...CCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAFAVGI*VSPVRT
Trigger: TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: SIWVCSGDLGKPCQNKNIFAVGI*VSPVRT
Trigger: TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA...GATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTAGTGCTTGTTATCTTTaGTGTGCAGCACGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACSACYL*CAARPR
Trigger: TCTCGGCCGTGCTGCACACCAAAGATAACAAGCACT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACTCTTCTTCCCGCTCGTaGGCTGGGCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNSSSRS*AGRAEE
Trigger: CTCCTCGGCCCGCCCAGCCCACGAGCGGGAAGAAGA...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTACAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLQDFAV*YVIAHP
Trigger: CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTG...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPTAPQG*NRSTKA
Trigger: AGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGAACGAAACCAAAGGCTaGCTCCCCTGGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWNETKG*LPWPRP
Trigger: AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTT...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCAAGAAAGAGGTGGGCTaGGCAGACTGCACATCTGTG +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLKKEVG*ADCTSV
Trigger: CACAGATGTGCAGTCTGCCCAGCCCACCTCTTTCTT...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517383.1
3UTR CAA 72 bp ACAAGGTCCCGCAGTCGCACTCTGAGCATCTCGTCATaGTCGCAGATGATATGGGTCGAGTCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: TRSRSRTLSISS*SQMIWVESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGCACAAGGAGGCAGACTaGGCCTTTGGCACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FAVGIWVSPVRTRTSLFLHKEAD*AFGTLS
Trigger: TGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTG...CAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp CCCACCATTCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAAAAGCTCAATTTTCTaGGAATATCCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTIPSGFAVGIWVSPVRTKSSIF*EYPTSW
Trigger: CCAGCTGGTGGGATATTCTCAGAAAATTGAGCTTTT...TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGAATGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLRNETG*SSWSSQ
Trigger: TTGGGAGCTCCAACTGGATCATCCAGTCTCATTACG...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGGAACATCGCTGTTTTTaGGAGAAGCTTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACEEHRCF*EKLGPW
Trigger: CCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTC...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTGAACATCGCTGTTTTTaGGAGAAGCTTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: WVCSGDLGKPCQNKNIAVEHRCF*EKLGPW
Trigger: CCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTC...AACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp GTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGCTGAGTCGATGTACTaGTATAGGCACTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VCSGDLGKPCQNKNIAVFAESMY*YRHSRR
Trigger: CCTCCTGGAGTGCCTATATCAGTACATCGACTCAGC...AAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATCTGGGAAAACTCCAGTaGACTGTTGGCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHLGKLQ*TVGHRG
Trigger: TCCCCTGTGGCCAACAGTTCACTGGAGTTTTCCCAG...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GTGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCTTACTCTGTTTGTTGTaGCAAAGCCACTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VLVIFGVQHGRDSCQGDALLCLL*QSHSAK
Trigger: CTTTGCTGAGTGGCTTTGTCACAACAAACAGAGTAA...GGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACTCTTTCAATGAAATTCACGCTGGCAGTCGATCATaGGGTCCATCCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: ILPQGGRLSLWHSFNEIHAGSRS*GPSCGT
Trigger: AGTCCCACAGGATGGACCTCATGATCGACTGCCAGC...GTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATCTGCGAGCTCTGGCATaGTCTCGATCTTCTCGTACC +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHLRALA*SRSSRT
Trigger: GGTACGAGAAGATCGAGATCATGCCAGAGCTCGCAG...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
CDS-3UTR TCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWERRCQA*SPWAPV
Trigger: CACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCT...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGGCCGAGGAGGGGGCTaGAGCAAGTGCTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEGRGGG*SKCLLS
Trigger: AGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTACTTCTGTAAGAATTTaGGGACAAGGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACTSVRI*GQGPAV
Trigger: GACTGCGGGACCTTGTCCTCAAATTCTTACAGAAGT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCAGCCTCCACTTCTGTAAGAATTTaGGGACAAGGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: SQMIWVESSSIWMSVSASTSVRI*GQGPAV
Trigger: GACTGCGGGACCTTGTCCTCAAATTCTTACAGAAGT...GGAGGCTGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGAATCCACAAATACATaGCCCGAGCACTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: SIWVCSGDLGKPCQNKNIESTNT*PEHSFS
Trigger: GCTAAAGGAGTGCTCGGGTCATGTATTTGTGGATTC...GATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR TCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCGAATCCACAAATACATaGCCCGAGCACTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAESTNT*PEHSFS
Trigger: GCTAAAGGAGTGCTCGGGTCATGTATTTGTGGATTC...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCATCCCAGCCGCCAATaGATCCTCCCTCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRHPSRQ*ILPLHP
Trigger: GGGGTGGAGAGGGAGGATGCATTGGCGGCTGGGATG...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR GCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCATGGTAAGGTTGGGTaGCCTGACAGGCAATACAGT +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPHGKVG*PDRQYS
Trigger: ACTGTATTGCCTGTCAGGGCACCCAACCTTACCATG...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCATGGTAAGGTTGGGTaGCCTGACAGGCAATACAGT +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLHGKVG*PDRQYS
Trigger: ACTGTATTGCCTGTCAGGGCACCCAACCTTACCATG...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTCAGAGCTAGGTTGCTaGAGAACTCTCCCACCATTC +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLSELGC*RTLPPF
Trigger: GAATGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGCTGTCAGAGCTAGGTTaGTGCAGAACTCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: FAVGIWVSPVRTRTSLFLLSELG*CRTLPP
Trigger: TGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGACAG...CAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGGGTCTGAATGAGCTCTaGATGAGGAAAAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACEGLNEL*MRKRWF
Trigger: GAACCACCTTTTCCTCATGCAGAGCTCATTCAGACC...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGC +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLKASGL*SLVRHR
Trigger: GCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GTCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGCTCAGAGTAGAAAATaGAGACAGATGGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: VPQSHSEHLVIVADDMGRAQSRK*RQMGSL
Trigger: AAGTGAACCCATCTGTCTGCATTTTCTACTCTGAGC...TCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR CCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATTTCATAATGGACTTTTaGTGGTTCAATAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDFIMDF*WFNSSH
Trigger: GTGACTGCTATTGAACCACCAAAAGTCCATTATGAA...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTACCAGCCAGGAAGATTaGACAGCCTGGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPTSQED*TAWDFE
Trigger: TTCAAAGTCCCAGGCTGTCCAATCTTCCTGGCTGGT...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GGGGTGTGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 4 (lower is better)
Translates to: GVCGKQGGSRDIRHFLVMVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...CATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACACACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CCA 90 bp TGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGAGACTGTGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: CGKQGGSRDIRHFLVMRLCRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...CAGTCTCATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CCA 90 bp TTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCAGGCTTGGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: LSLVCSTAETVAKEMPGLGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...CAAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCAGTCTCCGTGGATGCTaGGGTAGTGCTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLSLRGC*GSASAY
Trigger: ATAAGCTGAAGCACTACCCCAGCATCCACGGAGACT...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCTCAGCCGGGTGTCGATaGGGCAGTAGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: LGKPCQNKNIAVFERSLVSAGCR*GSRCIS
Trigger: TGAAATGCATCTACTGCCCCATCGACACCCGGCTGA...GACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp AAGGTAACAGCCTCTGAATGTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTAGCAGCTTTGACACCTaGATGAAGTTCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: KVTASECPYSSTRRQTEPSSFDT*MKFSRV
Trigger: CACCCGGCTGAACTTCATCCAGGTGTCAAAGCTGCT...AGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATTCAGAGGCTGTTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTAGTGCTTGTTATCTTTaGTGTGCAGCACGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPSACYL*CAARPR
Trigger: TCTCGGCCGTGCTGCACACCAAAGATAACAAGCACT...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CAGGAGGTCATAGATCACTCCAGAAGGGTAGCAGGGAACCAACACGTTTCCTCCGAAGATTGGACAGCCTaGGACAGTTTCATAATGGAC +
Preference number: 4 (lower is better)
Translates to: QEVIDHSRRVAGNQHVSSEDWTA*DSFIMD
Trigger: GTCCATTATGAAACTGTCCCAGGCTGTCCAATCTTC...GGAGGAAACGTGTTGGTTCCCTGCTACCCTTCTGGAGTGATCTATGACCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAATCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWESPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATCACAAGGAGGCAGACTaGGCCTTTGGCACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHHKEAD*AFGTLS
Trigger: TGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTG...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LGKPCQNKNIAVFERSLVRNETG*SSWSSQ
Trigger: TTGGGAGCTCCAACTGGATCATCCAGTCTCATTACG...GACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTGCGAGCTCTGGCATaGTCTCGATCTTCTCGTACC +
Preference number: 4 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWLRALA*SRSSRT
Trigger: GGTACGAGAAGATCGAGATCATGCCAGAGCTCGCAG...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416984.6
ENST00000521022.6
CDS-3UTR TCA 90 bp CAGCTGGATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCATCTTCTAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: QLDFTKGRVHLLHCIASSRRCQA*SPWAPV
Trigger: CACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCT...AGAAGATGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATCTTCTTCAATCTGGATaGGCGTCTCAGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHLLQSG*ASQPPG
Trigger: TCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAG...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCACTTCTGTAAGAATTTaGGGACAAGGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLTSVRI*GQGPAV
Trigger: GACTGCGGGACCTTGTCCTCAAATTCTTACAGAAGT...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCACCTCCGCCTCCCATaGACCTCTTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: SSYCVQHCRQVNETKGWLHLRLP*TSWKTS
Trigger: AGAAGTTTTCCAAGAGGTTCATGGGAGGCGGAGGTG...GAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp AGACACTTTCTCGTAATGAGACTGGATGATCCAGTTGGAGCTCCCAAGGGCATACATGGTAAGGTTGGGTaGCCTGACAGGCAATACAGT +
Preference number: 4 (lower is better)
Translates to: RHFLVMRLDDPVGAPKGIHGKVG*PDRQYS
Trigger: ACTGTATTGCCTGTCAGGGCACCCAACCTTACCATG...TATGCCCTTGGGAGCTCCAACTGGATCATCCAGTCTCATTACGAGAAAGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR GCA 90 bp CTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCTCAGAGCTAGGTTGCTaGAGAACTCTCCCACCATTC +
Preference number: 4 (lower is better)
Translates to: LGKPCQNKNIAVFERSLVSELGC*RTLPPF
Trigger: GAATGGTGGGAGAGTTCTGCAGCAACCTAGCTCTGA...GACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATTCAGGACACACCACGTaGAGGGGCTGCACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHSGHTT*RGCTSL
Trigger: TAAAGAAGTGCAGCCCCTGCACGTGGTGTGTCCTGA...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAAGCCTGCCGATCTCAGGACACACCACGTaGAGGGGCTGCACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FGTLSMKFTSSSMRSLPISGHTT*RGCTSL
Trigger: TAAAGAAGTGCAGCCCCTGCACGTGGTGTGTCCTGA...GATCGGCAGGCTTCTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp CAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCAGGTTGAGACTTCCACTGGTTAATGGCCTCTCATaGCACTCCTCAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QSSPLALYSIFSRLRLPLVNGLS*HSSGGL
Trigger: CAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAAC...CAGTGGAAGTCTCAACCTGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp TATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YCVQHCRQVNETKGWLPWERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...CCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCATGGTAAGGTTGGGTaGCCTGACAGGCAATACTTT +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPHGKVG*PDRQYF
Trigger: AAAGTATTGCCTGTCAGGGCACCCAACCTTACCATG...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521777.5
CDS-3UTR CCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGTCTTCCTTACGGGCCTaGGGCCCATGGTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRSSLRA*GPWCSG
Trigger: CCCAGAACACCATGGGCCCCAGGCCCGTAAGGAAGA...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR CCA 90 bp GTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTACCAGCCAGGAAGATTaGACAGCCTGGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: VCSGDLGKPCQNKNIAVFTSQED*TAWDFE
Trigger: TTCAAAGTCCCAGGCTGTCCAATCTTCCTGGCTGGT...AAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR CCA 90 bp CTCGGTGATGTATGGCAGCGCCATCATACAGTGATAGTTAGAGATGAGAATCACGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 4 (lower is better)
Translates to: LGDVWQRHHTVIVRDENHVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...GTGATTCTCATCTCTAACTATCACTGTATGATGGCGCTGCCATACATCACCGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520437.1
CDS-3UTR CCA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTCACTCAGCAAAGATCTaGGAAAACTCCAGTGAACTG +
Preference number: 4 (lower is better)
Translates to: DTTKTQLMASHATPQVACHSAKI*ENSSEL
Trigger: CAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTG...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGCACTCAGCAAAGATCTaGGAAAACTCCAGTGAACTG +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACEHSAKI*ENSSEL
Trigger: CAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTG...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWQDFAV*YVIAHP
Trigger: CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTG...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHTAPQG*NRSTKA
Trigger: AGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGT...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: STGMEPLNKGFRTLQSGTLSQMI*VESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAA...CGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGTGTTTATTAACAAATaGGCTCAGAGTAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDVFINK*AQSRKC
Trigger: GCATTTTCTACTCTGAGCCCATTTGTTAATAAACAC...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTAAGAAAAGAAAGAGGTaGGCTGGGCAGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLKKRKR*AGQTAH
Trigger: ATGTGCAGTCTGCCCAGCCCACCTCTTTCTTTTCTT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTTCAATAGCAGTCACTaGACTCCTCAAACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLFNSSH*TPQTQE
Trigger: TTCCTGGGTTTGAGGAGTTCAGTGACTGCTATTGAA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000522363.5
CDS-3UTR TCA 90 bp CTGGATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCATCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LDFTKGRVHLLHCIASSPSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...TGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp ATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACTCTTTCAATGAAATTCACCACAAGGAGGCAGACTaGGCCTTTGGCACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ILPQGGRLSLWHSFNEIHHKEAD*AFGTLS
Trigger: TGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTG...GTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp ATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACTCTTTCAATGAAATTCACCTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: ILPQGGRLSLWHSFNEIHLPLHP*EEKVTA
Trigger: GGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAG...GTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCAAAAGCTCAATTTTCTaGGAATATCCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAKSSIF*EYPTSW
Trigger: CCAGCTGGTGGGATATTCTCAGAAAATTGAGCTTTT...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGAAAAGCTCAATTTTCTaGGAATATCCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YCVQHCRQVNETKGWLPWKSSIF*EYPTSW
Trigger: CCAGCTGGTGGGATATTCTCAGAAAATTGAGCTTTT...CCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGAAAAGCTCAATTTTCTaGGAATATCCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACEKSSIF*EYPTSW
Trigger: CCAGCTGGTGGGATATTCTCAGAAAATTGAGCTTTT...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATCGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHRNETG*SSWSSQ
Trigger: TTGGGAGCTCCAACTGGATCATCCAGTCTCATTACG...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCCGTAATGAGACTGGATaGTCCAGTTGGAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TLSISSLSQMIWVESSSIRNETG*SSWSSQ
Trigger: TTGGGAGCTCCAACTGGATCATCCAGTCTCATTACG...GATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTCTCGTACCGACGTTTaGAGGGCAGGGCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALSRTDV*RAGREP
Trigger: AGGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGA...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGAGGAGATGCCAGGCTTaGTCTCCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRRRCQA*SPWAPV
Trigger: CACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCT...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTTCTTCAATCTGGATaGGCGTCTCAGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWLLQSG*ASQPPG
Trigger: TCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAAG...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAACTTCTGTAAGAATTTaGGGACAAGGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLTSVRI*GQGPAV
Trigger: GACTGCGGGACCTTGTCCTCAAATTCTTACAGAAGT...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGTGTGAGGGCAGCCAGTaGGGGACTGCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRCEGSQ*GTAGFQ
Trigger: CTGAAATCCTGCAGTCCCTCACTGGCTGCCCTCACA...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp AGACACTTTCTCGTAATGAGACTGGATGATCCAGTTGGAGCTCCCAAGGGCATAGGGAAAGTTCTTGCCTaGAACAGTGCTGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: RHFLVMRLDDPVGAPKGIGKVLA*NSAGNK
Trigger: CTTATTCCCAGCACTGTTTCAGGCAAGAACTTTCCC...TATGCCCTTGGGAGCTCCAACTGGATCATCCAGTCTCATTACGAGAAAGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp TGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTACCAAAAAGCTCCTCTaGATGTCCTTATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: WVCSGDLGKPCQNKNIAVTKKLL*MSLFFH
Trigger: GTGGAAGAATAAGGACATTCAGAGGAGCTTTTTGGT...AACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR GCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGAGCATCGCGGGACTTaGAGTCTTTCATCCTCACGT +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEEHRGT*SLSSSR
Trigger: ACGTGAGGATGAAAGACTGCAAGTCCCGCGATGCTC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR GCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGCCTGTGAAGCCGGTGTaGTCGGTGATGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALPVKPV*SVMYGS
Trigger: GCTGCCATACATCACCGAGCACACCGGCTTCACAGG...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp TGTGACAAAGCCACTCAGCAAAGATCTGGGAAAACTCCAGTGAACTGTTGGCCAGGTCTGAATGAGCTCTaGATGAGGAAAAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: CDKATQQRSGKTPVNCWPGLNEL*MRKRWF
Trigger: GAACCACCTTTTCCTCATGCAGAGCTCATTCAGACC...TGGCCAACAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTGGCTTTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR GCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTATTGTTATCTTTGGTGTaGAGCACGGCCGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLLLSLV*STAETV
Trigger: AACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR GCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCG +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALRVCTN*STGMEP
Trigger: CGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCT...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGTCACTGAAGCCATGCTaGTCCAGAAGAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TTKTQLMASHATPQVACESLKPC*SRRKER
Trigger: TCTTTCTTTTCTTCTGGAGCAGCATGGCTTCAGTGA...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS-3UTR GCA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCATATCACTGAAGCCATaGTGCTCCAGAAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGISLKP*CSRRKE
Trigger: TTCTTTTCTTCTGGAGCAGCATGGCTTCAGTGATAT...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS-3UTR CCA 90 bp GGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTGAAGATTGGACAGCCTaGGACTTTGAACAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GIWVSPVRTRTSLFLREAEDWTA*DFEQVA
Trigger: TGCCACTTGTTCAAAGTCCCAGGCTGTCCAATCTTC...AGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR CCA 90 bp AATGTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACTCTTTCAATGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 4 (lower is better)
Translates to: NVLILPQGGRLSLWHSFNVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...ATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CCA 90 bp ATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTAGAAGCCTGCCGATCTaGACGGTGGGTTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: MQTDGFTLPYFGIIILLRRSLPI*TVGSVA
Trigger: TGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCT...ACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp ACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: TLSISSLSQMIWVESSSIFAVGI*VSPVRT
Trigger: TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA...GATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATAGTAGATGCATTTCATaGCCAGCGGCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHSRCIS*PAAGKE
Trigger: CTCCTTACCAGCCGCTGGCCATGAAATGCATCTACT...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGTCAGCCGGGTGTCGATaGGGCAGTAGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWSAGCR*GSRCIS
Trigger: TGAAATGCATCTACTGCCCCATCGACACCCGGCTGA...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp GGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTTCAATAGCAGTCACTaGACTCCTCAAACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GIWVSPVRTRTSLFLREAFNSSH*TPQTQE
Trigger: TTCCTGGGTTTGAGGAGTTCAGTGACTGCTATTGAA...AGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR TCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGTCACCAGCTCTTCCATaGGAAGCCTGCCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRSPALP*EACRSG
Trigger: TCCAGATCGGCAGGCTTCTCATGGAAGAGCTGGTGA...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CTGGATTTTACTAAGGGCAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCACTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: LDFTKGRVHLLHCIASSPLPLHP*EEKVTA
Trigger: GGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAG...TGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTGCCCTTAGTAAAATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCTTACTCTGTTTGTTGTaGCAAAGCCACTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLLLCLL*QSHSAK
Trigger: CTTTGCTGAGTGGCTTTGTCACAACAAACAGAGTAA...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTTACTCTGTTTGTTGTaGCAAAGCCACTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLLLCLL*QSHSAK
Trigger: CTTTGCTGAGTGGCTTTGTCACAACAAACAGAGTAA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGGCCGAGGAGGGGGCTaGAGCAAGTGCTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNGRGGG*SKCLLS
Trigger: AGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGGAAGCGTCTTCCGGTaGAATCTCCGCCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCGSVFR*NLRHLP
Trigger: TGGCAGGTGGCGGAGATTGCACCGGAAGACGCTTCC...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416984.6
ENST00000521022.6
CDS-3UTR GCA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTACACGGCCGAGACAGTTaGCAAGGAGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVHGRDS*QGDARL
Trigger: AAGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTG...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGC +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEKASGL*SLVRHR
Trigger: GCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCGCTCAGAGTAGAAAATaGAGACAGATGGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLAQSRK*RQMGSL
Trigger: AAGTGAACCCATCTGTCTGCATTTTCTACTCTGAGC...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTGCTCAGAGTAGAAAATaGAGACAGATGGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: PETVLGISPDHFPQEPPLAQSRK*RQMGSL
Trigger: AAGTGAACCCATCTGTCTGCATTTTCTACTCTGAGC...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTATGCCGATCTGGACGGTaGGTTCCGTGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVCRSGR*VPWHTL
Trigger: CAGTGTATGCCACGGAACCCACCGTCCAGATCGGCA...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGCTTGGTCCATGGGCTaGGGGTGTGTGGTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNAWSMG*GCVVSK
Trigger: CTTGCTTACCACACACCCCCAGCCCATGGACCAAGC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAAGTCTCCGTGGATGCTaGGGTAGTGCTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWESLRGC*GSASAY
Trigger: ATAAGCTGAAGCACTACCCCAGCATCCACGGAGACT...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCCAGAGCTCCATGAAGTaGACCACGTCCCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCQSSMK*TTSPKR
Trigger: CCGCTTCGGGGACGTGGTCCACTTCATGGAGCTCTG...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRQDFAV*YVIAHP
Trigger: CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTG...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACTGGAGCAGGACGATATaGCCCTTGGCTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNWSRTI*PLAVSS
Trigger: GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCA...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTTTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: LPETVLGISPDHFPQEPPLSQMI*VESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAA...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCTTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLLSQMI*VESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAA...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGGGCGCAGTTCAGGCTaGGGGCCTTTAATGATGACC +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNGRSSG*GPLMMT
Trigger: GGTCATCATTAAAGGCCCCCAGCCTGAACTGCGCCC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR TCA 90 bp GGGGTGTGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVCGKQGGSRDIRHFLVMLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...CATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACACACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR TCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCACAAGGAGGCAGACTaGGCCTTTGGCACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRHKEAD*AFGTLS
Trigger: TGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTG...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp CAGAGTTCACCTCTTGCATTGTATAGCATCTTCTCCAGGTTGAGACTTCCACTGGAAGGTAACAGCCTCTaGATGTCCTTATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QSSPLALYSIFSRLRLPLEGNSL*MSLFFH
Trigger: GTGGAAGAATAAGGACATTCAGAGGCTGTTACCTTC...CAGTGGAAGTCTCAACCTGGAGAAGATGCTATACAATGCAAGAGGTGAACTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCTTATTGGTCTGAATaGGCTCTGCATGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHAYWSE*ALHEEK
Trigger: CTTTTCCTCATGCAGAGCTCATTCAGACCAATAAGC...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp ACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCGCTTATTGGTCTGAATaGGCTCTGCATGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: TLSISSLSQMIWVESSSIAYWSE*ALHEEK
Trigger: CTTTTCCTCATGCAGAGCTCATTCAGACCAATAAGC...GATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTTTCCCCAGAGCTCCATaGAGTGGACCACGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIFPRAP*SGPRPR
Trigger: TCGGGGACGTGGTCCACTTCATGGAGCTCTGGGGAA...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTCCCGCAGTCGCACTCTaGGCATCTCGTCATTGTCGC +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIPAVAL*ASRHCR
Trigger: GCGACAATGACGAGATGCTCAGAGTGCGACTGCGGG...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTAAGCGGAGGGAAGGGTaGCCGGTGAACACCACACAG +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIKRREG*PVNTTQ
Trigger: CTGTGTGGTGTTCACCGGGCACCCTTCCCTCCGCTT...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAATTGTTATCTTTGGTGTaGAGCACGGCCGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWELLSLV*STAETV
Trigger: AACTGTCTCGGCCGTGCTGCACACCAAAGATAACAA...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTCGGGCCTGGGGCCCATaGTGTTCTGGGATGTGTAGT +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIRAWGP*CSGMCS
Trigger: ACTACACATCCCAGAACACCATGGGCCCCAGGCCCG...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR CCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGAAGATTGGACAGCCTaGGACTTTGAACAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEEDWTA*DFEQVA
Trigger: TGCCACTTGTTCAAAGTCCCAGGCTGTCCAATCTTC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GGGGTGTGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: GVCGKQGGSRDIRHFLVMGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...CATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACACACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CCA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAAGGAAAAGGTGGTTCTaGAAGATACACCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLRKRWF*KIHLTL
Trigger: CAGAGTAAGGTGTATCTTCCAGAACCACCTTTTCCT...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CCA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTACAGGACTTTGCAGTCTaGTACGTCATCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVQDFAV*YVIAHP
Trigger: CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTG...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TTCTTCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGAAAATGCAGACAGATaGGTTCACTTTACCATATTT +
Preference number: 4 (lower is better)
Translates to: FFNLDERLSLLEQDDMALENADR*VHFTIF
Trigger: AAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC...AAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR TCA 90 bp CTGAGCCTTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAAGCCTTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSLWHSFNEIHQLFHEKPLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...AGGCTTCTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR TCA 90 bp TCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGTTGGCACTCTTTCAATaGAATTCACCAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SEHLVIVADDMGRVFFNLLALFQ*NSPALP
Trigger: TGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAA...CAGATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACCTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNLPLHP*EEKVTA
Trigger: GGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAG...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGCTTATTGGTCTGAATaGGCTCTGCATGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEAYWSE*ALHEEK
Trigger: CTTTTCCTCATGCAGAGCTCATTCAGACCAATAAGC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR GCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACTCAGGACACACCACGTaGAGGGGCTGCACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNSGHTT*RGCTSL
Trigger: TAAAGAAGTGCAGCCCCTGCACGTGGTGTGTCCTGA...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCG +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIRVCTN*STGMEP
Trigger: CGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCT...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGACCAGCCAGGAAGATTaGACAGCCTGGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRTSQED*TAWDFE
Trigger: TTCAAAGTCCCAGGCTGTCCAATCTTCCTGGCTGGT...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGTGCTCGGTGATGTATaGCAGCGCCATCATACAGTG +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNVLGDV*QRHHTV
Trigger: CACTGTATGATGGCGCTGCCATACATCACCGAGCAC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTTTGCAGTGGGGATCTaGGTAAGCCCTGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALFAVGI*VSPVRT
Trigger: TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp ATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTTCAGCCGGGTGTCGATaGGGCAGTAGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: MQTDGFTLPYFGIIILLRSAGCR*GSRCIS
Trigger: TGAAATGCATCTACTGCCCCATCGACACCCGGCTGA...ACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACTCAGCCGGGTGTCGATaGGGCAGTAGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNSAGCR*GSRCIS
Trigger: TGAAATGCATCTACTGCCCCATCGACACCCGGCTGA...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACAGCAGCTTTGACACCTaGATGAAGTTCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNSSFDT*MKFSRV
Trigger: CACCCGGCTGAACTTCATCCAGGTGTCAAAGCTGCT...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATTTGTCGCAGATGATATaGGTCGAGTCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHLSQMI*VESSSI
Trigger: GATTGAAGAAGACTCGACCCATATCATCTGCGACAA...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR TCA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTACTCTCCACCCCAGCATaGTATCATGTCTTCCTTACG +
Preference number: 4 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVLSTPA*YHVFLT
Trigger: CGTAAGGAAGACATGATATCATGCTGGGGTGGAGAG...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR TCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCCACAAGGAGGCAGACTaGGCCTTTGGCACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCHKEAD*AFGTLS
Trigger: TGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTG...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGCTGAGTCGATGTACTaGTATAGGCACTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCAESMY*YRHSRR
Trigger: CCTCCTGGAGTGCCTATATCAGTACATCGACTCAGC...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGGGTCTGAATGAGCTCTaGATGAGGAAAAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALGLNEL*MRKRWF
Trigger: GAACCACCTTTTCCTCATGCAGAGCTCATTCAGACC...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGGATCATCATCTTATTaGGTACAGCACTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: ENEPEVERESSCLKQCWEGSSSY*VQHCRQ
Trigger: TTGCCTACAGTGCTGTACGCAATAAGATGATGATCC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp GTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTTTCATAATGGACTTTTaGTGGTTCAATAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: VCSGDLGKPCQNKNIAVFFIMDF*WFNSSH
Trigger: GTGACTGCTATTGAACCACCAAAAGTCCATTATGAA...AAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CCA 90 bp ATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTAGTAGATGCATTTCATaGCCAGCGGCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: MQTDGFTLPYFGIIILLRSRCIS*PAAGKE
Trigger: CTCCTTACCAGCCGCTGGCCATGAAATGCATCTACT...ACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACAGTGCTTGTTATCTTTaGTGTGCAGCACGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNSACYL*CAARPR
Trigger: TCTCGGCCGTGCTGCACACCAAAGATAACAAGCACT...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCGAAAATGCAGACAGATaGGTTCACTTTACCATATTT +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLENADR*VHFTIF
Trigger: AAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCGTGTTTATTAACAAATaGGCTCAGAGTAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLVFINK*AQSRKC
Trigger: GCATTTTCTACTCTGAGCCCATTTGTTAATAAACAC...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGACAGCCTGGGACTTTaGACAAGTGGCAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIDSLGL*TSGKGR
Trigger: CCTTCCTTTGCCACTTGTTCAAAGTCCCAGGCTGTC...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTACGTCATTGTCGCAGATaGTATGGGTCGAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVRHCRR*YGSSLL
Trigger: AAGAAGACTCGACCCATATCATCTGCGACAATGACG...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAATCCACAAATACATaGCCCGAGCACTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNESTNT*PEHSFS
Trigger: GCTAAAGGAGTGCTCGGGTCATGTATTTGTGGATTC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCAGTAGATGCATTTCATaGCCAGCGGCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCSRCIS*PAAGKE
Trigger: CTCCTTACCAGCCGCTGGCCATGAAATGCATCTACT...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp ATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTGAAGGTAACAGCCTCTaGATGTCCTTATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MQTDGFTLPYFGIIILLREGNSL*MSLFFH
Trigger: GTGGAAGAATAAGGACATTCAGAGGCTGTTACCTTC...ACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTAAGGCTTCAGGACTTTaGAGTCTGGTACGTCATCGC +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIKASGL*SLVRHR
Trigger: GCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGGGATCATCATCTTATTaGGTACAGCACTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALGSSSY*VQHCRQ
Trigger: TTGCCTACAGTGCTGTACGCAATAAGATGATGATCC...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGAAGATTGGACAGCCTaGGACTTTGAACAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCEDWTA*DFEQVA
Trigger: TGCCACTTGTTCAAAGTCCCAGGCTGTCCAATCTTC...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGAGGAAAAGGTGGTTCTaGAAGATACACCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALRKRWF*KIHLTL
Trigger: CAGAGTAAGGTGTATCTTCCAGAACCACCTTTTCCT...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGAAGGTAACAGCCTCTaGATGTCCTTATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCEGNSL*MSLFFH
Trigger: GTGGAAGAATAAGGACATTCAGAGGCTGTTACCTTC...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTATTACTCTGTTTGTTGTaGCAAAGCCACTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVLLCLL*QSHSAK
Trigger: CTTTGCTGAGTGGCTTTGTCACAACAAACAGAGTAA...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR TCA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTCGTCATTGTCGCAGATaGTATGGGTCGAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIRHCRR*YGSSLL
Trigger: AAGAAGACTCGACCCATATCATCTGCGACAATGACG...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR GCA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGAAAGGGAAAGTTCTTaGCTGAAACAGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCERESS*LKQCWE
Trigger: TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTC...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGGCAGACTGAGCCTTTaGCACTCTTTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNGRLSL*HSFNEI
Trigger: AATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
3UTR CAA 72 bp AGAAAATGCAGACAGATGGGTTCACTTTACCATATTTaGGGATCATCATCTTATTGCGTACAGCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: RKCRQMGSLYHI*GSSSYCVQHCR
Trigger: CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGGAAAATGCAGACAGATaGGTTCACTTTACCATATTT +
Preference number: 4 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRENADR*VHFTIF
Trigger: AAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CCA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGGTGTTTATTAACAAATaGGCTCAGAGTAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: DGFTLPYFGIIILLRTALVFINK*AQSRKC
Trigger: GCATTTTCTACTCTGAGCCCATTTGTTAATAAACAC...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGCACGGCCGAGACAGTaGCCAAGGAGATGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAARPRQ*PRRCQA
Trigger: AGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAGCTCCATGAAGTGGACCACGTCCCCGAAGCGGAGGGAAGGGTGCCCGGTGAAGCACGGCCGAGACAGTaGCCAAGGAGATGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ELHEVDHVPEAEGRVPGEARPRQ*PRRCQA
Trigger: AGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC...TTCACCGGGCACCCTTCCCTCCGCTTCGGGGACGTGGTCCACTTCATGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCAGAGCATCGCGGGACTaGCAGTCTTTCATCCTCACG +
Preference number: 5 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSARASRD*QSFILT
Trigger: CGTGAGGATGAAAGACTGCAAGTCCCGCGATGCTCT...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR CAA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGGCACGGCCGAGACAGTaGCCAAGGAGATGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQARPRQ*PRRCQA
Trigger: AGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGGCTGTCTAAAGTCGTaGCTGAAGTCTCCGTGGATG +
Preference number: 5 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAGCLKS*LKSPWM
Trigger: CATCCACGGAGACTTCAGCAACGACTTTAGACAGCC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCCACCCTCCAGCTCCTaGAGAGAGCCAGAGTTGAGA +
Preference number: 5 (lower is better)
Translates to: KGWLPWPRPGTDARQPASPPSSS*REPELR
Trigger: TCTCAACTCTGGCTCTCTCAAGGAGCTGGAGGGTGG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS CCA 90 bp CCTCCCTCTCCACCCCAGCATGATATCATGTCTTCCTTACGGGCCTaGGGCCCATGGTGTTCTGGGATGTGTAGTCCCGACGGCTCCGAC +
Preference number: 5 (lower is better)
Translates to: PPSPPQHDIMSSLRA*GPWCSGMCSPDGSD
Trigger: GTCGGAGCCGTCGGGACTACACATCCCAGAACACCATGGGCCCCAGGCCCGTAAGGAAGACATGATATCATGCTGGGGTGGAGAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR CAA 90 bp TACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGGCCGAACTCCAGTGAACTGTaGGCCACAGGGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: YVIAHPLSLLPARGLGGPNSSEL*ATGEMK
Trigger: CTTCATCTCCCCTGTGGCCAACAGTTCACTGGAGTT...CGGCCCGCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCCTGAGCATCTCGTCATaGTCGCAGATGATATGGGTC +
Preference number: 5 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSALSISS*SQMIWV
Trigger: GACCCATATCATCTGCGACAATGACGAGATGCTCAG...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS GCA 90 bp ACTCCTCAAACCCAGGAAGCGTCTTCCGGTGCAATCTCCGCCACCTaGCAGCCGAGAGCATCGCGGGACTTGCAGTCTTTCATCCTCACG +
Preference number: 5 (lower is better)
Translates to: TPQTQEASSGAISAT*QPRASRDLQSFILT
Trigger: CGTGAGGATGAAAGACTGCAAGTCCCGCGATGCTCTCGGCTGGCAGGTGGCGGAGATTGCACCGGAAGACGCTTCCTGGGTTTGAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR CAA 90 bp ACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGCATCTTCTCCAGGTaGAGACTTCCACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: TKGWLPWPRPGTDARQPASIFSR*RLPLHP
Trigger: AGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT...GGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQKEMPG*ISMGTS
Trigger: ACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTGCACGGCCGAGACAGTaGCCAAGGAGATGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SIWMSVSASWSRTIWPLAARPRQ*PRRCQA
Trigger: AGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC...AGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGAGGACGATATGGCCCTaGGCTGTGTCCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQRTIWP*AVSSTL
Trigger: TAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCT...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS GCA 90 bp CCGGTGCAATCTCCGCCACCTGCCAGCCGAGAGCATCGCGGGACTTaGAGTCTTTCATCCTCACGTCCCTTCCAGGGGAATAATGGGAAA +
Preference number: 5 (lower is better)
Translates to: PVQSPPPASREHRGT*SLSSSRPFQGNNGK
Trigger: TTTCCCATTATTCCCCTGGAAGGGACGTGAGGATGAAAGACTGCAAGTCCCGCGATGCTCTCGGCTGGCAGGTGGCGGAGATTGCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS GCA 90 bp CAGGCAATACGTGGGTCAACTGAGTGCACGGGAGCACAGAGTGGCTaGCTGAGGTTCACACACTTGTACAGGAGGCGCTTGCAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: QAIRGSTECTGAQSG*LRFTHLYRRRLQRA
Trigger: GGCCCTTTGCAAGCGCCTCCTGTACAAGTGTGTGAACCTCAGGCAGCCACTCTGTGCTCCCGTGCACTCAGTTGACCCACGTATTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS-3UTR CAA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCATTGCATGGTAAGGTaGGGTGCCCTGACAGGCAAT +
Preference number: 5 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQHCMVR*GALTGN
Trigger: ATTGCCTGTCAGGGCACCCAACCTTACCATGCAATG...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGAACTCCAGTGAACTGTaGGCCACAGGGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: KPKAGSPGRGLGLMQDSQNSSEL*ATGEMK
Trigger: CTTCATCTCCCCTGTGGCCAACAGTTCACTGGAGTT...CTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGGCTGGGCGGCTGTCTAAAGTCGTaGCTGAAGTCTCCGTGGATG +
Preference number: 5 (lower is better)
Translates to: VWYVIAHPLSLLPARGLGGCLKS*LKSPWM
Trigger: CATCCACGGAGACTTCAGCAACGACTTTAGACAGCC...GCCCAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTTTCTCGTACCGACGTTaGAAGGGCAGGGCGAGAACC +
Preference number: 5 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPFSYRR*KGRART
Trigger: GGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGAA...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTGGCTGTGTCCTCCAGGACGATATGGCCCTaGGCTGTGTCCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: MSVSASWSRTIWPLAVSSRTIWP*AVSSTL
Trigger: TAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCT...GGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS TCA 90 bp CTCAGGACACACCACGTGCAGGGGCTGAGGAACCAATGGGACAGTTaGGAAAGGTGGTGTGAAGTACAGTGGCCCCTGTGGAAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: LRTHHVQGLRNQWDS*ERWCEVQWPLWKAH
Trigger: ATGGGCCTTCCACAGGGGCCACTGTACTTCACACCACCTTTCTCAACTGTCCCATTGGTTCCTCAGCCCCTGCACGTGGTGTGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520005.1
CDS TCA 90 bp CAATACGTGGGTCAACTGAGTGCACGGGAGCACAGAGTGGCTGCCTaGGGTTCACACACTTGTACAGGAGGCGCTTGCAAAGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: QYVGQLSAREHRVAA*GSHTCTGGACKGPR
Trigger: TCTGGGCCCTTTGCAAGCGCCTCCTGTACAAGTGTGTGAACCTCAGGCAGCCACTCTGTGCTCCCGTGCACTCAGTTGACCCACGTATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS GCA 90 bp CGGCACCAGCGAAACCAGCTCACCTTCTCCAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTG +
Preference number: 5 (lower is better)
Translates to: RHQRNQLTFSRVCTN*STGMEPLNKGFRTL
Trigger: CAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGGTGAGCTGGTTTCGCTGGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CCA 90 bp GGGTCTCCCAGCAGGACCTTAGACCAAACAGATGCCACAGGACAGTaGGGACTAAGTGACAAGCAGCAACATCCACTCCCTGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GSPSRTLDQTDATGQ*GLSDKQQHPLPAAR
Trigger: CCTGGCTGCAGGGAGTGGATGTTGCTGCTTGTCACTTAGTCCCCACTGTCCTGTGGCATCTGTTTGGTCTAAGGTCCTGCTGGGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS-3UTR CAA 90 bp GATCTGGACGGTGGGTTCCGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCAACTCCAGTGAACTGTaGGCCACAGGGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: DLDGGFRGIHCACEAGVLNSSEL*ATGEMK
Trigger: CTTCATCTCCCCTGTGGCCAACAGTTCACTGGAGTT...GAGCACACCGGCTTCACAGGCACAGTGTATGCCACGGAACCCACCGTCCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp TCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACCTCCGCCGTGAATATGACGGTATaGAGACTAGATTTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SPGRGLGLMQDSQPVTSAVNMTV*RLDFPQ
Trigger: CTGGGGAAAATCTAGTCTCAATACCGTCATATTCAC...GGCGGAGGTGACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCGCACGGCCGAGACAGTaGCCAAGGAGATGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGARPRQ*PRRCQA
Trigger: AGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAAAAGGCTTCAGGACTTaGCAGTCTGGTACGTCATCG +
Preference number: 5 (lower is better)
Translates to: ETKGWLPWPRPGTDARQPKGFRT*QSGTSS
Trigger: CGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTT...TGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTCTTCCCGCTCGTGGCCACCCTCCAGCTCCTaGAGAGAGCCAGAGTTGAGA +
Preference number: 5 (lower is better)
Translates to: LCSLVRHRSPAFSSSRSWPPSSS*REPELR
Trigger: TCTCAACTCTGGCTCTCTCAAGGAGCTGGAGGGTGG...CCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS TCA 90 bp CAGGACCTTAGACCAAACAGATGCCACAGGACAGTGGGGACTAAGTaGCAAGCAGCAACATCCACTCCCTGCAGCCAGGGGGCCATAGTG +
Preference number: 5 (lower is better)
Translates to: QDLRPNRCHRTVGTK*QAATSTPCSQGAIV
Trigger: CACTATGGCCCCCTGGCTGCAGGGAGTGGATGTTGCTGCTTGTCACTTAGTCCCCACTGTCCTGTGGCATCTGTTTGGTCTAAGGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS GCA 90 bp ACAGGAGGCGCTTGCAAAGGGCCCAGACCCTGTGGCCTCCAGCGATaGTCTTTGTGCAATTCCAGTTTTCTTCCTCTGTCACCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: TGGACKGPRPCGLQR*SLCNSSFLPLSPSS
Trigger: GCTGCTTGGTGACAGAGGAAGAAAACTGGAATTGCACAAAGAGCATCGCTGGAGGCCACAGGGTCTGGGCCCTTTGCAAGCGCCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS GCA 90 bp GAGTTTTCACGGCACCAGCGAAACCAGCTCACCTTCTCCAGGGTCTaGACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: EFSRHQRNQLTFSRV*TNCSTGMEPLNKGF
Trigger: GAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGGTGAGCTGGTTTCGCTGGTGCCGTGAAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS GCA 90 bp TCTGGTGACCTCGTGCTGGGAGGAAGGATGGGGCACTCCTCACTCTaGTTTCTTTCTCCTGGGTCTCCCAGCAGGACCTTAGACCAAACA +
Preference number: 5 (lower is better)
Translates to: SGDLVLGGRMGHSSL*FLSPGSPSRTLDQT
Trigger: TGTTTGGTCTAAGGTCCTGCTGGGAGACCCAGGAGAAAGAAAGCAGAGTGAGGAGTGCCCCATCCTTCCTCCCAGCACGAGGTCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS-3UTR CAA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATCATTGCATGGTAAGGTaGGGTGCCCTGACAGGCAAT +
Preference number: 5 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDHCMVR*GALTGN
Trigger: ATTGCCTGTCAGGGCACCCAACCTTACCATGCAATG...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCGTTTTTGAGAGAAGCTaGGTCCATGGGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: FSRVCTNCSTGMEPLNKGVFERS*VHGLGV
Trigger: CACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAAC...GCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTAGAACATCGCTGTTTTaGAGAGAAGCTTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: KGWLPWPRPGTDARQPASRTSLF*REAWSM
Trigger: CATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCT...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGAAAGTGCTTGTTATCTTaGGTGTGCAGCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: VNETKGWLPWPRPGTDARKCLLS*VCSTAE
Trigger: CTCGGCCGTGCTGCACACCAAAGATAACAAGCACTT...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTCCTCCCATGAACCTCTaGGAAAACTTCTCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QHCRQVNETKGWLPWPRPPPMNL*ENFSCP
Trigger: GGGACAGGAGAAGTTTTCCAAGAGGTTCATGGGAGG...AGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGACAGCCAGCCAGTCACTCCTTTAGCTCCTaGTCCAAGAAAGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: KGWLPWPRPGTDARQPASHSFSS*SKKAFP
Trigger: TGGAAATGCTTTCTTGGACAAGGAGCTAAAGGAGTG...ACTGGCTGGCTGTCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS CCA 90 bp ACCAGCTCACCTTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGT +
Preference number: 5 (lower is better)
Translates to: TSSPSPGSARTAPQG*NRSTKASGLCSLVR
Trigger: ACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGGTGAGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CCA 90 bp GCAGCTTTTTCTTCAGTCTGGAGAGGCCTTCTGGTGACCTCGTGCTaGGAGGAAGGATGGGGCACTCCTCACTCTGCTTTCTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: AAFSSVWRGLLVTSC*EEGWGTPHSAFFLL
Trigger: CAGGAGAAAGAAAGCAGAGTGAGGAGTGCCCCATCCTTCCTCCCAGCACGAGGTCACCAGAAGGCCTCTCCAGACTGAAGAAAAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS-3UTR CAA 90 bp AGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATAGCATCTTCTCCAGGTaGAGACTTCCACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: RQVNETKGWLPWPRPGTDSIFSR*RLPLHP
Trigger: AGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT...ATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTTTCTCGTACCGACGTTaGAAGGGCAGGGCGAGAACC +
Preference number: 5 (lower is better)
Translates to: LHELLHRDGTAQQRLQDFFSYRR*KGRART
Trigger: GGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGAA...AAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TGCTTGTTATCTTTGGTGTGCAGCACGGCCGAGACAGTTGCCAAGGAGATGCCATTCTCGTACCGACGTTaGAAGGGCAGGGCGAGAACC +
Preference number: 5 (lower is better)
Translates to: CLLSLVCSTAETVAKEMPFSYRR*KGRART
Trigger: GGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGAA...TGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CCCACCATTCCATCTGGGTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGGACGATATGGCCCTaGGCTGTGTCCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: PTIPSGFAVGIWVSPVRTRTIWP*AVSSTL
Trigger: TAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCT...TGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGAATGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp GGGTGCCCGGTGAACACCACACAGGGCTGTCTAAAGTCGTTGCTGAAGTCTCCGCTGAGCATCTCGTCATaGTCGCAGATGATATGGGTC +
Preference number: 5 (lower is better)
Translates to: GCPVNTTQGCLKSLLKSPLSISS*SQMIWV
Trigger: GACCCATATCATCTGCGACAATGACGAGATGCTCAG...CGGAGACTTCAGCAACGACTTTAGACAGCCCTGTGTGGTGTTCACCGGGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS GCA 90 bp TCCGAACGCCTCCTTCCGTCAGCTCAAATTCATCCCAGCCGCCAATaGATCCTCCCTCTCCACCCCAGCATGATATCATGTCTTCCTTAC +
Preference number: 5 (lower is better)
Translates to: SERLLPSAQIHPSRQ*ILPLHPSMISCLPY
Trigger: GTAAGGAAGACATGATATCATGCTGGGGTGGAGAGGGAGGATGCATTGGCGGCTGGGATGAATTTGAGCTGACGGAAGGAGGCGTTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS GCA 90 bp GAAGCAGCTTTTTCTTCAGTCTGGAGAGGCCTTCTGGTGACCTCGTaGTGGGAGGAAGGATGGGGCACTCCTCACTCTGCTTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: EAAFSSVWRGLLVTS*WEEGWGTPHSAFFL
Trigger: GAGAAAGAAAGCAGAGTGAGGAGTGCCCCATCCTTCCTCCCAGCACGAGGTCACCAGAAGGCCTCTCCAGACTGAAGAAAAAGCTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CCA 90 bp CATAAGTTTCACGGTAACTTCCATGTGTCTGCTCCCAGCGGTCTCTaGGCTTCCTCGGGGCACGGTCTTTCTCTAACATTCCCACATGCC +
Preference number: 5 (lower is better)
Translates to: HKFHGNFHVSAPSGL*ASSGHGLSLTFPHA
Trigger: GGCATGTGGGAATGTTAGAGAAAGACCGTGCCCCGAGGAAGCCCAGAGACCGCTGGGAGCAGACACATGGAAGTTACCGTGAAACTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520005.1
CDS-3UTR CAA 90 bp ACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCATCATACAGACTTCCACTGCATCCTaGAGAGGAGAAGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: TVPVKPVCSVMYGSAIIQTSTAS*RGEGNS
Trigger: GCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGT...CTGTATGATGGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CAA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCAGTTCACCTCTTGCATaGTATAGCATCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGSSPLA*YSIFSR
Trigger: CCTGGAGAAGATGCTATACAATGCAAGAGGTGAACT...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACGGTGGGTTCCGTGGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGGGCAGAGTTCACCTCTaGCATTGTATAGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: TVGSVAYTVPVKPVCSVMGRVHL*HCIASS
Trigger: AGAAGATGCTATACAATGCAAGAGGTGAACTCTGCC...CATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCACGGAACCCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CAA 90 bp TCCCGCAGTCGCACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGGGCTGTCTAAAGTCGTaGCTGAAGTCTCCGTGGATG +
Preference number: 5 (lower is better)
Translates to: SRSRTLSISSLSQMIWVEGCLKS*LKSPWM
Trigger: CATCCACGGAGACTTCAGCAACGACTTTAGACAGCC...CTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TTCTTCAATCTGGATGAGCGTCTCAGCCTCCTGGAGCAGGACGATATGGCCCTTAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: FFNLDERLSLLEQDDMALKEMPG*ISMGTS
Trigger: ACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT...AAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTCCACCCTCCAGCTCCTaGAGAGAGCCAGAGTTGAGA +
Preference number: 5 (lower is better)
Translates to: DTTKTQLMASHATPQVACPPSSS*REPELR
Trigger: TCTCAACTCTGGCTCTCTCAAGGAGCTGGAGGGTGG...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GGGCCGAGGAGGGGGCTGAAGCAAGTGCTTGTTATCTTTGGTGTGCAGCACGGCCACTCCTTTAGCTCCTaGTCCAAGAAAGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: GPRRGLKQVLVIFGVQHGHSFSS*SKKAFP
Trigger: TGGAAATGCTTTCTTGGACAAGGAGCTAAAGGAGTG...GCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR CAA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCTGACAGGCAATACTTaGCCCTCTGACCTAGGAGCG +
Preference number: 5 (lower is better)
Translates to: EDTTKTQLMASHATPQVALTGNT*PSDLGA
Trigger: CGCTCCTAGGTCAGAGGGCAAAGTATTGCCTGTCAG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521777.5
CDS GCA 90 bp TGGCCCTTGGCTGTGTCCTCCACCTTAATATCACTGAAGCCATGCTaGTCCAGAAGAAAAGAAAGAGGTGGGCTGGGCAGACTGCACATC +
Preference number: 5 (lower is better)
Translates to: WPLAVSSTLISLKPC*SRRKERGGLGRLHI
Trigger: GATGTGCAGTCTGCCCAGCCCACCTCTTTCTTTTCTTCTGGAGCAGCATGGCTTCAGTGATATTAAGGTGGAGGACACAGCCAAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS CCA 90 bp TCTGTGAGATCTTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGT +
Preference number: 5 (lower is better)
Translates to: SVRSSPGSARTAPQG*NRSTKASGLCSLVR
Trigger: ACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGATCTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS CCA 90 bp TTCACACACTTGTACAGGAGGCGCTTGCAAAGGGCCCAGACCCTGTaGCCTCCAGCGATGCTCTTTGTGCAATTCCAGTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FTHLYRRRLQRAQTL*PPAMLFVQFQFSSS
Trigger: AGAGGAAGAAAACTGGAATTGCACAAAGAGCATCGCTGGAGGCCACAGGGTCTGGGCCCTTTGCAAGCGCCTCCTGTACAAGTGTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS-3UTR CAA 90 bp TCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGTGTGTGGTAAGCAAGCATTGCATGGTAAGGTaGGGTGCCCTGACAGGCAAT +
Preference number: 5 (lower is better)
Translates to: SLFLREAWSMGWGCVVSKHCMVR*GALTGN
Trigger: ATTGCCTGTCAGGGCACCCAACCTTACCATGCAATG...CTTGCTTACCACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR CAA 90 bp TCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGTGTGTGGTAAGCAAGGGACAGCCTGGGACTTaGAACAAGTGGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SLFLREAWSMGWGCVVSKGQPGT*NKWQRK
Trigger: CTTCCTTTGCCACTTGTTCAAAGTCCCAGGCTGTCC...CTTGCTTACCACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR CAA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTGGACAGCCTGGGACTTaGAACAAGTGGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: EDTTKTQLMASHATPQVAGQPGT*NKWQRK
Trigger: CTTCCTTTGCCACTTGTTCAAAGTCCCAGGCTGTCC...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGACTTCCACTGCATCCTaGAGAGGAGAAGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: TAQQRLQDFAVWYVIAHPTSTAS*RGEGNS
Trigger: GCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGT...CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCATCAGTTCACCTCTTGCATaGTATAGCATCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AYTVPVKPVCSVMYGSAISSPLA*YSIFSR
Trigger: CCTGGAGAAGATGCTATACAATGCAAGAGGTGAACT...GATGGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CAA 90 bp GTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGGTTTTTGAGAGAAGCTaGGTCCATGGGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: VRTRTSLFLREAWSMGWGVFERS*VHGLGV
Trigger: CACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAAC...CCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CAA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCGTTTTTGAGAGAAGCTaGGTCCATGGGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAVFERS*VHGLGV
Trigger: CACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAAC...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GTAAACGAAACCAAAGGCTGGCTCCCCTGGCCGAGGCCTGGGACTGATGCAAGAAGAACATCGCTGTTTTaGAGAGAAGCTTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: VNETKGWLPWPRPGTDARRTSLF*REAWSM
Trigger: CATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCT...TCTTGCATCAGTCCCAGGCCTCGGCCAGGGGAGCCAGCCTTTGGTTTCGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GGCATACACTGTGCCTGTGAAGCCGGTGTGCTCGGTGATGTATGGCAGCGCCATAGAACATCGCTGTTTTaGAGAGAAGCTTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: GIHCACEAGVLGDVWQRHRTSLF*REAWSM
Trigger: CATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCT...ATGGCGCTGCCATACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTTTCTCGTACCGACGTTaGAAGGGCAGGGCGAGAACC +
Preference number: 5 (lower is better)
Translates to: PETVLGISPDHFPQEPPLFSYRR*KGRART
Trigger: GGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGAA...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAKEMPG*ISMGTS
Trigger: ACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGCTTTCTCTTAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: QRLQDFAVWYVIAHPLSLKEMPG*ISMGTS
Trigger: ACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT...AAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTAAGTGCTTGTTATCTTaGGTGTGCAGCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: EDTTKTQLMASHATPQVAKCLLS*VCSTAE
Trigger: CTCGGCCGTGCTGCACACCAAAGATAACAAGCACTT...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGAGGACGATATGGCCCTaGGCTGTGTCCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: TTKTQLMASHATPQVACERTIWP*AVSSTL
Trigger: TAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCT...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTCCTCCCATGAACCTCTaGGAAAACTTCTCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: EDTTKTQLMASHATPQVAPPMNL*ENFSCP
Trigger: GGGACAGGAGAAGTTTTCCAAGAGGTTCATGGGAGG...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS GCA 90 bp ATATGGCCCTTGGCTGTGTCCTCCACCTTAATATCACTGAAGCCATaGTGCTCCAGAAGAAAAGAAAGAGGTGGGCTGGGCAGACTGCAC +
Preference number: 5 (lower is better)
Translates to: IWPLAVSSTLISLKP*CSRRKERGGLGRLH
Trigger: GTGCAGTCTGCCCAGCCCACCTCTTTCTTTTCTTCTGGAGCAGCATGGCTTCAGTGATATTAAGGTGGAGGACACAGCCAAGGGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS GCA 90 bp GCTTGCAAAGGGCCCAGACCCTGTGGCCTCCAGCGATGCTCTTTGTaGAATTCCAGTTTTCTTCCTCTGTCACCAAGCAGCATATCATCT +
Preference number: 5 (lower is better)
Translates to: ACKGPRPCGLQRCSL*NSSFLPLSPSSISS
Trigger: AGATGATATGCTGCTTGGTGACAGAGGAAGAAAACTGGAATTGCACAAAGAGCATCGCTGGAGGCCACAGGGTCTGGGCCCTTTGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS-3UTR CAA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGGACAGCCTGGGACTTaGAACAAGTGGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: DTTKTQLMASHATPQVACGQPGT*NKWQRK
Trigger: CTTCCTTTGCCACTTGTTCAAAGTCCCAGGCTGTCC...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp AGAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCACTTCCACTGCATCCTaGAGAGGAGAAGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: RGHHKDTVNGLSCHSSGGTSTAS*RGEGNS
Trigger: GCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGT...GCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTACTTCCACTGCATCCTaGAGAGGAGAAGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: EDTTKTQLMASHATPQVATSTAS*RGEGNS
Trigger: GCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGT...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGTGTGTGGTAAGCAGCATCTTCTCCAGGTaGAGACTTCCACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: TSLFLREAWSMGWGCVVSSIFSR*RLPLHP
Trigger: AGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT...GCTTACCACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTGTTTTTGAGAGAAGCTaGGTCCATGGGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: PETVLGISPDHFPQEPPLVFERS*VHGLGV
Trigger: CACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAAC...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCGGCTGTCTAAAGTCGTaGCTGAAGTCTCCGTGGATG +
Preference number: 5 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAGCLKS*LKSPWM
Trigger: CATCCACGGAGACTTCAGCAACGACTTTAGACAGCC...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGGGGAAGTGCTTGTTATCTTaGGTGTGCAGCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: VRTRTSLFLREAWSMGWGKCLLS*VCSTAE
Trigger: CTCGGCCGTGCTGCACACCAAAGATAACAAGCACTT...CCCCCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp CACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCAAAGGCTTCAGGACTTaGCAGTCTGGTACGTCATCG +
Preference number: 5 (lower is better)
Translates to: HRDGTAQQRLQDFAVWYVKGFRT*QSGTSS
Trigger: CGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTT...GACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGCTGAGCATCTCGTCATaGTCGCAGATGATATGGGTC +
Preference number: 5 (lower is better)
Translates to: STGMEPLNKGFRTLQSGTLSISS*SQMIWV
Trigger: GACCCATATCATCTGCGACAATGACGAGATGCTCAG...CGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCCCTCCCATGAACCTCTaGGAAAACTTCTCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAPPMNL*ENFSCP
Trigger: GGGACAGGAGAAGTTTTCCAAGAGGTTCATGGGAGG...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCATTGCATGGTAAGGTaGGGTGCCCTGACAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LPETVLGISPDHFPQEPPHCMVR*GALTGN
Trigger: ATTGCCTGTCAGGGCACCCAACCTTACCATGCAATG...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTAGCATCTTCTCCAGGTaGAGACTTCCACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: DTTKTQLMASHATPQVACSIFSR*RLPLHP
Trigger: AGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GTCTGCACGAACTGCTCCACAGGGATGGAACCGCTCAACAAAGGCTTCAGGACTGGCAGAGTTCACCTCTaGCATTGTATAGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: VCTNCSTGMEPLNKGFRTGRVHL*HCIASS
Trigger: AGAAGATGCTATACAATGCAAGAGGTGAACTCTGCC...AGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GTTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGTTTTTGAGAGAAGCTaGGTCCATGGGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: VCSGDLGKPCQNKNIAVFVFERS*VHGLGV
Trigger: CACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAAC...AAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CAA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCAAGTGCTTGTTATCTTaGGTGTGCAGCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLKCLLS*VCSTAE
Trigger: CTCGGCCGTGCTGCACACCAAAGATAACAAGCACTT...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTAAGTGCTTGTTATCTTaGGTGTGCAGCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LPETVLGISPDHFPQEPPKCLLS*VCSTAE
Trigger: CTCGGCCGTGCTGCACACCAAAGATAACAAGCACTT...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGAAAGGCTTCAGGACTTaGCAGTCTGGTACGTCATCG +
Preference number: 5 (lower is better)
Translates to: TTKTQLMASHATPQVACEKGFRT*QSGTSS
Trigger: CGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTT...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAAGGACGATATGGCCCTaGGCTGTGTCCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLRTIWP*AVSSTL
Trigger: TAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCT...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTTGAATTTGAGCACATaGCATGGTAAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: EDTTKTQLMASHATPQVALNLST*HGKVGC
Trigger: GCACCCAACCTTACCATGCAATGTGCTCAAATTCAA...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTACTTCCACTGCATCCTaGAGAGGAGAAGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: PETVLGISPDHFPQEPPLTSTAS*RGEGNS
Trigger: GCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGT...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TTGCCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTAGCATCTTCTCCAGGTaGAGACTTCCACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: LPETVLGISPDHFPQEPPSIFSR*RLPLHP
Trigger: AGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT...AGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACCGCTCAACAAAGGCTTCAGGACTTTGCAGTCTGGTACGTCATCGCTCACCCGGTGAATATGACGGTATaGAGACTAGATTTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: TAQQRLQDFAVWYVIAHPVNMTV*RLDFPQ
Trigger: CTGGGGAAAATCTAGTCTCAATACCGTCATATTCAC...CGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGGCACGGCCGAGACAGTaGCCAAGGAGATGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: DGFTLPYFGIIILLRTALARPRQ*PRRCQA
Trigger: AGCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGC...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp AACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTCACTCCTGAGCATCTCGTCATaGTCGCAGATGATATGGGTC +
Preference number: 5 (lower is better)
Translates to: NSAGNKSRPFPSRATSSLLSISS*SQMIWV
Trigger: GACCCATATCATCTGCGACAATGACGAGATGCTCAG...GAGTGAAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGTTGAATTTGAGCACATaGCATGGTAAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: TTKTQLMASHATPQVACELNLST*HGKVGC
Trigger: GCACCCAACCTTACCATGCAATGTGCTCAAATTCAA...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CAGCCTCTGAATGTCCTTATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACAGTTCACCTCTTGCATaGTATAGCATCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QPLNVLILPQGGRLSLWHSSPLA*YSIFSR
Trigger: CCTGGAGAAGATGCTATACAATGCAAGAGGTGAACT...GTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATTCAGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CAA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTAGTTCACCTCTTGCATaGTATAGCATCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: DTTKTQLMASHATPQVACSSPLA*YSIFSR
Trigger: CCTGGAGAAGATGCTATACAATGCAAGAGGTGAACT...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCTCCCCTGGGGCAGAGTTCACCTCTaGCATTGTATAGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: YCVQHCRQVNETKGWLPWGRVHL*HCIASS
Trigger: AGAAGATGCTATACAATGCAAGAGGTGAACTCTGCC...CCAGGGGAGCCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp TCGCAGATGATATGGGTCGAGTCTTCTTCAATCTGGATGAGCGTCTCAGCCTCCGGCAGAGTTCACCTCTaGCATTGTATAGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: SQMIWVESSSIWMSVSASGRVHL*HCIASS
Trigger: AGAAGATGCTATACAATGCAAGAGGTGAACTCTGCC...GGAGGCTGAGACGCTCATCCAGATTGAAGAAGACTCGACCCATATCATCTGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTACTGAGCATCTCGTCATaGTCGCAGATGATATGGGTC +
Preference number: 5 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLLSISS*SQMIWV
Trigger: GACCCATATCATCTGCGACAATGACGAGATGCTCAG...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGAGCACTCCTTTAGCTCCTaGTCCAAGAAAGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: TTKTQLMASHATPQVACEHSFSS*SKKAFP
Trigger: TGGAAATGCTTTCTTGGACAAGGAGCTAAAGGAGTG...CTCACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS TCA 90 bp CAATACAGTTTCATAATGGACTTTTGGTGGTTCAATAGCAGTCACTaGACTCCTCAAACCCAGGAAGCGTCTTCCGGTGCAATCTCCGCC +
Preference number: 5 (lower is better)
Translates to: QYSFIMDFWWFNSSH*TPQTQEASSGAISA
Trigger: GGCGGAGATTGCACCGGAAGACGCTTCCTGGGTTTGAGGAGTTCAGTGACTGCTATTGAACCACCAAAAGTCCATTATGAAACTGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000520831.1
ENST00000521022.6
CDS TCA 90 bp CTGTCCTGGAGATCTTCATCAGCTGTCGCATGCTTGGATGGAATATaGATAGTAAAGCCGGAGCAAACATCGAATTCCCACGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LSWRSSSAVACLDGI*IVKPEQTSNSHVPS
Trigger: GGAAGGAACGTGGGAATTCGATGTTTGCTCCGGCTTTACTATTCATATTCCATCCAAGCATGCGACAGCTGATGAAGATCTCCAGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521070.1
CDS CCA 90 bp GCACCAGTGAATCTGCGAGCTGAAAGCAAAGGGCGCAGTTCAGGCTaGGGGCCTTTAATGATGACCATTACTCTTCCTTTAATCTGTATT +
Preference number: 5 (lower is better)
Translates to: APVNLRAESKGRSSG*GPLMMTITLPLICI
Trigger: AATACAGATTAAAGGAAGAGTAATGGTCATCATTAAAGGCCCCCAGCCTGAACTGCGCCCTTTGCTTTCAGCTCGCAGATTCACTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523303.5
CDS-3UTR CAA 90 bp GAGGACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTGTGGTTGATTTGAATTaGAGCACATTGCATGGTAAG +
Preference number: 5 (lower is better)
Translates to: EDTTKTQLMASHATPQVAVVDLN*STLHGK
Trigger: CTTACCATGCAATGTGCTCAAATTCAAATCAACCAC...AGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGGACAGCCTGGGACTTaGAACAAGTGGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ENEPEVERESSCLKQCWEGQPGT*NKWQRK
Trigger: CTTCCTTTGCCACTTGTTCAAAGTCCCAGGCTGTCC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ACTCTGAGCATCTCGTCATTGTCGCAGATGATATGGGTCGAGTCTTCTTCAATCACTTCCACTGCATCCTaGAGAGGAGAAGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: TLSISSLSQMIWVESSSITSTAS*RGEGNS
Trigger: GCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGT...GATTGAAGAAGACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CTGAGCCTTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAAGCCTAGCATCTTCTCCAGGTaGAGACTTCCACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: LSLWHSFNEIHQLFHEKPSIFSR*RLPLHP
Trigger: AGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT...AGGCTTCTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAAGGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520437.1
ENST00000522363.5
CDS-3UTR CAA 90 bp CCTGAAACAGTGCTGGGAATAAGTCCAGACCATTTCCCTCAAGAGCCACCTCTTGGCAGAGTTCACCTCTaGCATTGTATAGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: PETVLGISPDHFPQEPPLGRVHL*HCIASS
Trigger: AGAAGATGCTATACAATGCAAGAGGTGAACTCTGCC...AAGAGGTGGCTCTTGAGGGAAATGGTCTGGACTTATTCCCAGCACTGTTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCCATGGGCTGGAGAACATCGCTGTTTTaGAGAGAAGCTTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: PVRTRTSLFLREAWSMGWRTSLF*REAWSM
Trigger: CATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCT...CCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518510.5
ENST00000522363.5
CDS-3UTR CAA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGAACTCCAGTGAACTGTaGGCCACAGGGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWNSSEL*ATGEMK
Trigger: CTTCATCTCCCCTGTGGCCAACAGTTCACTGGAGTT...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGGGCTGTCTAAAGTCGTaGCTGAAGTCTCCGTGGATG +
Preference number: 5 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWGCLKS*LKSPWM
Trigger: CATCCACGGAGACTTCAGCAACGACTTTAGACAGCC...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp GCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCGTGAATATGACGGTATaGAGACTAGATTTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: ATSSLLKPEDTTKTQLMAVNMTV*RLDFPQ
Trigger: CTGGGGAAAATCTAGTCTCAATACCGTCATATTCAC...GGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTTCTCGTACCGACGTTaGAAGGGCAGGGCGAGAACC +
Preference number: 5 (lower is better)
Translates to: DGFTLPYFGIIILLRTALFSYRR*KGRART
Trigger: GGTTCTCGCCCTGCCCTTCAAACGTCGGTACGAGAA...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATAAAGGCTTCAGGACTTaGCAGTCTGGTACGTCATCG +
Preference number: 5 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHKGFRT*QSGTSS
Trigger: CGATGACGTACCAGACTGCAAAGTCCTGAAGCCTTT...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGCCTCCCATGAACCTCTaGGAAAACTTCTCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWPPMNL*ENFSCP
Trigger: GGGACAGGAGAAGTTTTCCAAGAGGTTCATGGGAGG...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS TCA 90 bp TCCGTCTCTGGTAAACAGAATTCCGGCACAGAATCCACAAATACATaGCCCGAGCACTCCTTTAGCTCCTTGTCCAAGAAAGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SVSGKQNSGTESTNT*PEHSFSSLSKKAFP
Trigger: TGGAAATGCTTTCTTGGACAAGGAGCTAAAGGAGTGCTCGGGTCATGTATTTGTGGATTCTGTGCCGGAATTCTGTTTACCAGAGACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000518510.5
ENST00000520184.1
ENST00000520983.5
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
ENST00000523436.5
ENST00000524081.5
CDS-3UTR CAA 90 bp GACACCACAAAGACACAGTTAATGGCCTCTCATGCCACTCCTCAGGTGGCTTGTGTGGTTGATTTGAATTaGAGCACATTGCATGGTAAG +
Preference number: 5 (lower is better)
Translates to: DTTKTQLMASHATPQVACVVDLN*STLHGK
Trigger: CTTACCATGCAATGTGCTCAAATTCAAATCAACCAC...ACAAGCCACCTGAGGAGTGGCATGAGAGGCCATTAACTGTGTCTTTGTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAACTGAGCATCTCGTCATaGTCGCAGATGATATGGGTC +
Preference number: 5 (lower is better)
Translates to: ENEPEVERESSCLKQCWELSISS*SQMIWV
Trigger: GACCCATATCATCTGCGACAATGACGAGATGCTCAG...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000517383.1
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp TTTGCAGTGGGGATCTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGCACTCCTTTAGCTCCTaGTCCAAGAAAGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: FAVGIWVSPVRTRTSLFLHSFSS*SKKAFP
Trigger: TGGAAATGCTTTCTTGGACAAGGAGCTAAAGGAGTG...CAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS TCA 90 bp GCATTGTATAGCATCTTCTCCAGGTTGAGACTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCCTGCAAATGGATCACAATGTCAACT +
Preference number: 5 (lower is better)
Translates to: ALYSIFSRLRLPLHP*EEKVTACKWITMST
Trigger: AGTTGACATTGTGATCCATTTGCAGGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCTATACAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523076.1
CDS CCA 90 bp ACTAACACTGTCCTGGAGATCTTCATCAGCTGTCGCATGCTTGGATaGAATATGAATAGTAAAGCCGGAGCAAACATCGAATTCCCACGT +
Preference number: 5 (lower is better)
Translates to: TNTVLEIFISCRMLG*NMNSKAGANIEFPR
Trigger: ACGTGGGAATTCGATGTTTGCTCCGGCTTTACTATTCATATTCCATCCAAGCATGCGACAGCTGATGAAGATCTCCAGGACAGTGTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521070.1
CDS-3UTR CAA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATTTGAATTTGAGCACATaGCATGGTAAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHLNLST*HGKVGC
Trigger: GCACCCAACCTTACCATGCAATGTGCTCAAATTCAA...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CTGGGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTTGGTCTCTATTAGCTCCGTCTaGTCCAAGAAAGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: LGKPCQNKNIAVFERSLVSISSV*SKKAFP
Trigger: TGGAAATGCTTTCTTGGACAAGACGGAGCTAATAGA...GACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp TCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAATGGCCTCTCATAGTTCACCTCTTGCATaGTATAGCATCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSLLKPEDTTKTQLMASHSSPLA*YSIFSR
Trigger: CCTGGAGAAGATGCTATACAATGCAAGAGGTGAACT...ATGAGAGGCCATTAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000522363.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAAGGAGATGCCAGGCTaGATCTCCATGGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVKEMPG*ISMGTS
Trigger: ACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp TTTGGCACTCTTTCAATGAAATTCACCAGCTCTTCCATGAGAAGCCTGCCGATCCTATTAGCTCCGTCTTaGAACAAGTGGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: FGTLSMKFTSSSMRSLPILLAPS*NKWQRK
Trigger: CTTCCTTTGCCACTTGTTCAAAGACGGAGCTAATAG...GATCGGCAGGCTTCTCATGGAAGAGCTGGTGAATTTCATTGAAAGAGTGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520437.1
CDS-3UTR CAA 90 bp TGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGAGACTGTTGAATTTGAGCACATaGCATGGTAAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: CGKQGGSRDIRHFLVMRLLNLST*HGKVGC
Trigger: GCACCCAACCTTACCATGCAATGTGCTCAAATTCAA...CAGTCTCATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR CAA 90 bp GGGGTGTGTGGTAAGCAAGGAGGATCCAGAGACATAAGACACTTTCTCGTAATGGTGGTTGATTTGAATTaGAGCACATTGCATGGTAAG +
Preference number: 5 (lower is better)
Translates to: GVCGKQGGSRDIRHFLVMVVDLN*STLHGK
Trigger: CTTACCATGCAATGTGCTCAAATTCAAATCAACCAC...CATTACGAGAAAGTGTCTTATGTCTCTGGATCCTCCTTGCTTACCACACACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518510.5
CDS-3UTR CAA 90 bp TCAAGAGCCACCTCTTCACTCCTTAAGCCAGAGGACACCACAAAGACACAGTTAGTGGTTGATTTGAATTaGAGCACATTGCATGGTAAG +
Preference number: 5 (lower is better)
Translates to: SRATSSLLKPEDTTKTQLVVDLN*STLHGK
Trigger: CTTACCATGCAATGTGCTCAAATTCAAATCAACCAC...TAACTGTGTCTTTGTGGTGTCCTCTGGCTTAAGGAGTGAAGAGGTGGCTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp ATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTGGACAGCCTGGGACTTaGAACAAGTGGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: MQTDGFTLPYFGIIILLRGQPGT*NKWQRK
Trigger: CTTCCTTTGCCACTTGTTCAAAGTCCCAGGCTGTCC...ACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp GAAAATGAGCCTGAAGTTGAAAGGGAAAGTTCTTGCCTGAAACAGTGCTGGGAAGGCAGAGTTCACCTCTaGCATTGTATAGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: ENEPEVERESSCLKQCWEGRVHL*HCIASS
Trigger: AGAAGATGCTATACAATGCAAGAGGTGAACTCTGCC...TTCCCAGCACTGTTTCAGGCAAGAACTTTCCCTTTCAACTTCAGGCTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
CDS-3UTR CAA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACTCCAGTGAACTGTaGGCCACAGGGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVNSSEL*ATGEMK
Trigger: CTTCATCTCCCCTGTGGCCAACAGTTCACTGGAGTT...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAAGTGCTTGTTATCTTaGGTGTGCAGCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVKCLLS*VCSTAE
Trigger: CTCGGCCGTGCTGCACACCAAAGATAACAAGCACTT...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp TCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGAAACCAAAGGCTGGTCTATTAGCTCCGTCTaGTCCAAGAAAGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SSSYCVQHCRQVNETKGWSISSV*SKKAFP
Trigger: TGGAAATGCTTTCTTGGACAAGACGGAGCTAATAGA...CCAGCCTTTGGTTTCGTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS-3UTR CAA 90 bp ATTCTTCCACAAGGAGGCAGACTGAGCCTTTGGCACTCTTTCAATGAAATTCACGTGAATATGACGGTATaGAGACTAGATTTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: ILPQGGRLSLWHSFNEIHVNMTV*RLDFPQ
Trigger: CTGGGGAAAATCTAGTCTCAATACCGTCATATTCAC...GTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS-3UTR CAA 90 bp GAAAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTAGGACGATATGGCCCTaGGCTGTGTCCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: ENADRWVHFTIFWDHHLIRTIWP*AVSSTL
Trigger: TAAGGTGGAGGACACAGCCAAGGGCCATATCGTCCT...AATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS GCA 90 bp CGTGAAGGCACTGGGGCAGAAGAAACATCTCGGAAACCCCTAAACTaGCTCAGCTTAATTTATCTTTCTTACTCTTTACATAAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: REGTGAEETSRKPLN*LSLIYLSYSLHKFH
Trigger: GTGAAACTTATGTAAAGAGTAAGAAAGATAAATTAAGCTGAGGCAGTTTAGGGGTTTCCGAGATGTTTCTTCTGCCCCAGTGCCTTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519578.1
ENST00000520005.1
CDS-3UTR CAA 90 bp GATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGAGTTCACCTCTTGCATaGTATAGCATCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: DGFTLPYFGIIILLRTALSSPLA*YSIFSR
Trigger: CCTGGAGAAGATGCTATACAATGCAAGAGGTGAACT...CAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp GGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGAGAACATCGCTGTTTTaGAGAGAAGCTTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: GSLYHILGSSSYCVQHCRRTSLF*REAWSM
Trigger: CATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCT...CCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp CTTTACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAGAACATCGCTGTTTTaGAGAGAAGCTTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: LYHILGSSSYCVQHCRQVRTSLF*REAWSM
Trigger: CATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCT...TACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS TCA 90 bp GAGAAGGTAACAGCCTGCAAATGGATCACAATGTCAACTACCAGGTaGACATTTCTTCATGTTCTACAGCATTCCTTTCTAGTAATTTGT +
Preference number: 5 (lower is better)
Translates to: EKVTACKWITMSTTR*TFLHVLQHSFLVIC
Trigger: ACAAATTACTAGAAAGGAATGCTGTAGAACATGAAGAAATGTTCACCTGGTAGTTGACATTGTGATCCATTTGCAGGCTGTTACCTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523076.1
CDS GCA 90 bp GATGTCAAGATGATGAATGTGATTCTAAGAATAGCAGCAGGTCTCTaGACACGTAAGTCACTTTTAAGCATTATCTATAGTTCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: DVKMMNVILRIAAGL*TRKSLLSIIYSSCS
Trigger: GCTACAGGAACTATAGATAATGCTTAAAAGTGACTTACGTGTGCAGAGACCTGCTGCTATTCTTAGAATCACATTCATCATCTTGACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521070.1
CDS-3UTR CAA 90 bp TACCATATTTTGGGATCATCATCTTATTGCGTACAGCACTGTAGGCAAGTAAACGTGGTTGATTTGAATTaGAGCACATTGCATGGTAAG +
Preference number: 5 (lower is better)
Translates to: YHILGSSSYCVQHCRQVNVVDLN*STLHGK
Trigger: CTTACCATGCAATGTGCTCAAATTCAAATCAACCAC...GTTTACTTGCCTACAGTGCTGTACGCAATAAGATGATGATCCCAAAATATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS-3UTR CAA 90 bp AAATGCAGACAGATGGGTTCACTTTACCATATTTTGGGATCATCATCTTATTGCGTGAATATGACGGTATaGAGACTAGATTTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: KCRQMGSLYHILGSSSYCVNMTV*RLDFPQ
Trigger: CTGGGGAAAATCTAGTCTCAATACCGTCATATTCAC...GCAATAAGATGATGATCCCAAAATATGGTAAAGTGAACCCATCTGTCTGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000521022.6
ENST00000523303.5
CDS CCA 90 bp GCAAGAGGGAGCTTTATAAGGGATGAACAAGTTCTGTATCTTCACTaGGGCACTGATTATATCAAAATTCAGTATTACACATTTAAGATC +
Preference number: 5 (lower is better)
Translates to: ARGSFIRDEQVLYLH*GTDYIKIQYYTFKI
Trigger: GATCTTAAATGTGTAATACTGAATTTTGATATAATCAGTGCCCCAGTGAAGATACAGAACTTGTTCATCCCTTATAAAGCTCCCTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522074.1
CDS GCA 72 bp ACCCAGGAAGCGTCTTCCGGTGCAATCTCCGCCACCTaGCAGCCGAGAGCATCGCGGGACTTGCAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: TQEASSGAISAT*QPRASRDLQSF
Trigger: GAAAGACTGCAAGTCCCGCGATGCTCTCGGCTGGCAGGTGGCGGAGATTGCACCGGAAGACGCTTCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS CAA 72 bp GGCTGCCTGAGGTTCACACACTTGTACAGGAGGCGCTaGCAAAGGGCCCAGACCCTGTGGCCTCCAGCGATG +
Preference number: 6 (lower is better)
Translates to: GCLRFTHLYRRR*QRAQTLWPPAM
Trigger: CATCGCTGGAGGCCACAGGGTCTGGGCCCTTTGCAAGCGCCTCCTGTACAAGTGTGTGAACCTCAGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS GCA 72 bp TCACTGAACTCCTCAAACCCAGGAAGCGTCTTCCGGTaGAATCTCCGCCACCTGCCAGCCGAGAGCATCGCG +
Preference number: 6 (lower is better)
Translates to: SLNSSNPGSVFR*NLRHLPAESIA
Trigger: CGCGATGCTCTCGGCTGGCAGGTGGCGGAGATTGCACCGGAAGACGCTTCCTGGGTTTGAGGAGTTCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS GCA 72 bp CGGCACCAGCGAAACCAGCTCACCTTCTCCAGGGTCTaGACGAACTGCTCCACAGGGATGGAACCGCTCAAC +
Preference number: 6 (lower is better)
Translates to: RHQRNQLTFSRV*TNCSTGMEPLN
Trigger: GTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGGTGAGCTGGTTTCGCTGGTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CAA 72 bp ATCTCCGCCACCTGCCAGCCGAGAGCATCGCGGGACTaGCAGTCTTTCATCCTCACGTCCCTTCCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: ISATCQPRASRD*QSFILTSLPGE
Trigger: TTCCCCTGGAAGGGACGTGAGGATGAAAGACTGCAAGTCCCGCGATGCTCTCGGCTGGCAGGTGGCGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS CAA 90 bp GCACAGAGTGGCTGCCTGAGGTTCACACACTTGTACAGGAGGCGCTaGCAAAGGGCCCAGACCCTGTGGCCTCCAGCGATGCTCTTTGTG +
Preference number: 6 (lower is better)
Translates to: AQSGCLRFTHLYRRR*QRAQTLWPPAMLFV
Trigger: CACAAAGAGCATCGCTGGAGGCCACAGGGTCTGGGCCCTTTGCAAGCGCCTCCTGTACAAGTGTGTGAACCTCAGGCAGCCACTCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS GCA 72 bp CGTGGGTCAACTGAGTGCACGGGAGCACAGAGTGGCTaGCTGAGGTTCACACACTTGTACAGGAGGCGCTTG +
Preference number: 6 (lower is better)
Translates to: RGSTECTGAQSG*LRFTHLYRRRL
Trigger: CAAGCGCCTCCTGTACAAGTGTGTGAACCTCAGGCAGCCACTCTGTGCTCCCGTGCACTCAGTTGACCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS TCA 72 bp CACCACGTGCAGGGGCTGAGGAACCAATGGGACAGTTaGGAAAGGTGGTGTGAAGTACAGTGGCCCCTGTGG +
Preference number: 6 (lower is better)
Translates to: HHVQGLRNQWDS*ERWCEVQWPLW
Trigger: CCACAGGGGCCACTGTACTTCACACCACCTTTCTCAACTGTCCCATTGGTTCCTCAGCCCCTGCACGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520005.1
CDS CCA 72 bp CATGATATCATGTCTTCCTTACGGGCCTGGGGCCCATaGTGTTCTGGGATGTGTAGTCCCGACGGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: HDIMSSLRAWGP*CSGMCSPDGSD
Trigger: GTCGGAGCCGTCGGGACTACACATCCCAGAACACCATGGGCCCCAGGCCCGTAAGGAAGACATGATATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS CCA 72 bp CCACCCCAGCATGATATCATGTCTTCCTTACGGGCCTaGGGCCCATGGTGTTCTGGGATGTGTAGTCCCGAC +
Preference number: 6 (lower is better)
Translates to: PPQHDIMSSLRA*GPWCSGMCSPD
Trigger: GTCGGGACTACACATCCCAGAACACCATGGGCCCCAGGCCCGTAAGGAAGACATGATATCATGCTGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS CCA 72 bp AGAGGCCTTCTGGTGACCTCGTGCTGGGAGGAAGGATaGGGCACTCCTCACTCTGCTTTCTTTCTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: RGLLVTSCWEEG*GTPHSAFFLLG
Trigger: ACCCAGGAGAAAGAAAGCAGAGTGAGGAGTGCCCCATCCTTCCTCCCAGCACGAGGTCACCAGAAGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CCA 72 bp TCTTCAGTCTGGAGAGGCCTTCTGGTGACCTCGTGCTaGGAGGAAGGATGGGGCACTCCTCACTCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: SSVWRGLLVTSC*EEGWGTPHSAF
Trigger: GAAAGCAGAGTGAGGAGTGCCCCATCCTTCCTCCCAGCACGAGGTCACCAGAAGGCCTCTCCAGACTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS TCA 72 bp GGTCAACTGAGTGCACGGGAGCACAGAGTGGCTGCCTaGGGTTCACACACTTGTACAGGAGGCGCTTGCAAA +
Preference number: 6 (lower is better)
Translates to: GQLSAREHRVAA*GSHTCTGGACK
Trigger: TTTGCAAGCGCCTCCTGTACAAGTGTGTGAACCTCAGGCAGCCACTCTGTGCTCCCGTGCACTCAGTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS GCA 72 bp CGAAACCAGCTCACCTTCTCCAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCGCTCAACAAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: RNQLTFSRVCTN*STGMEPLNKGF
Trigger: GAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGGTGAGCTGGTTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS GCA 72 bp TTTTCTTCAGTCTGGAGAGGCCTTCTGGTGACCTCGTaGTGGGAGGAAGGATGGGGCACTCCTCACTCTGCT +
Preference number: 6 (lower is better)
Translates to: FSSVWRGLLVTS*WEEGWGTPHSA
Trigger: AGCAGAGTGAGGAGTGCCCCATCCTTCCTCCCAGCACGAGGTCACCAGAAGGCCTCTCCAGACTGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CCA 72 bp CACGGTAACTTCCATGTGTCTGCTCCCAGCGGTCTCTaGGCTTCCTCGGGGCACGGTCTTTCTCTAACATTC +
Preference number: 6 (lower is better)
Translates to: HGNFHVSAPSGL*ASSGHGLSLTF
Trigger: GAATGTTAGAGAAAGACCGTGCCCCGAGGAAGCCCAGAGACCGCTGGGAGCAGACACATGGAAGTTACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520005.1
CDS TCA 72 bp GCTGAGGAACCAATGGGACAGTTGAGAAAGGTGGTGTaGAGTACAGTGGCCCCTGTGGAAGGCCCATTCCTG +
Preference number: 6 (lower is better)
Translates to: AEEPMGQLRKVV*STVAPVEGPFL
Trigger: CAGGAATGGGCCTTCCACAGGGGCCACTGTACTTCACACCACCTTTCTCAACTGTCCCATTGGTTCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520005.1
CDS TCA 72 bp GGACACACCACGTGCAGGGGCACTTCCAGGCCAAGGTaGACTTTCATCCTCTCAAGCCCAATGAACCGTAGA +
Preference number: 6 (lower is better)
Translates to: GHTTCRGTSRPR*TFILSSPMNRR
Trigger: TCTACGGTTCATTGGGCTTGAGAGGATGAAAGTTCACCTTGGCCTGGAAGTGCCCCTGCACGTGGTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519578.1
CDS CCA 72 bp CCTTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGT +
Preference number: 6 (lower is better)
Translates to: PSPGSARTAPQG*NRSTKASGLCS
Trigger: ACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CCA 72 bp GCCTCACTACCCTGCCCCACTCGTCACATGTGTGTGTaGAAGCAGCTTTTTCTTCAGTCTGGAGAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: ASLPCPTRHMCV*KQLFLQSGEAF
Trigger: GAAGGCCTCTCCAGACTGAAGAAAAAGCTGCTTCCACACACACATGTGACGAGTGGGGCAGGGTAGTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS CAA 90 bp GGCGCTTGCAAAGGGCCCAGACCCTGTGGCCTCCAGCGATGCTCTTaGTGCAATTCCAGTTTTCTTCCTCTGTCACCAAGCAGCATATCA +
Preference number: 6 (lower is better)
Translates to: GACKGPRPCGLQRCS*CNSSFLPLSPSSIS
Trigger: TGATATGCTGCTTGGTGACAGAGGAAGAAAACTGGAATTGCACAAAGAGCATCGCTGGAGGCCACAGGGTCTGGGCCCTTTGCAAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS TCA 72 bp AGCATCTTCTCCAGGTTGAGACTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCCTGCCGATCTGGACGG +
Preference number: 6 (lower is better)
Translates to: SIFSRLRLPLHP*EEKVTACRSGR
Trigger: CCGTCCAGATCGGCAGGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524081.5
CDS GCA 72 bp CTCCTTCCGTCAGCTCAAATTCATCCCAGCCGCCAATaGATCCTCCCTCTCCACCCCAGCATGATATCATGT +
Preference number: 6 (lower is better)
Translates to: LLPSAQIHPSRQ*ILPLHPSMISC
Trigger: ACATGATATCATGCTGGGGTGGAGAGGGAGGATGCATTGGCGGCTGGGATGAATTTGAGCTGACGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416984.6
CDS GCA 72 bp CACATCTGTGAGATCTTCTCCAGGGTCTGCACGAACTaGTCCACAGGGATGGAACCGCTCAACAAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: HICEIFSRVCTN*STGMEPLNKGF
Trigger: GAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGATCTCACAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS GCA 72 bp GCTCCAGAAGAAAAGAAAGAGGTGGGCTGGGCAGACTaGACATCTGTGAGATCTTCTCCAGGGTCTGCACGA +
Preference number: 6 (lower is better)
Translates to: APEEKKEVGWAD*TSVRSSPGSAR
Trigger: TCGTGCAGACCCTGGAGAAGATCTCACAGATGTGCAGTCTGCCCAGCCCACCTCTTTCTTTTCTTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS CCA 72 bp TCTTCTCCAGGGTCTGCACGAACTGCTCCACAGGGATaGAACCGCTCAACAAAGGCTTCAGGACTTTGCAGT +
Preference number: 6 (lower is better)
Translates to: SSPGSARTAPQG*NRSTKASGLCS
Trigger: ACTGCAAAGTCCTGAAGCCTTTGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517383.1
CDS CAA 72 bp AAAGGGCCCAGACCCTGTGGCCTCCAGCGATGCTCTTaGTGCAATTCCAGTTTTCTTCCTCTGTCACCAAGC +
Preference number: 6 (lower is better)
Translates to: KGPRPCGLQRCS*CNSSFLPLSPS
Trigger: GCTTGGTGACAGAGGAAGAAAACTGGAATTGCACAAAGAGCATCGCTGGAGGCCACAGGGTCTGGGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS CCA 72 bp AGCAGGACCTTAGACCAAACAGATGCCACAGGACAGTaGGGACTAAGTGACAAGCAGCAACATCCACTCCCT +
Preference number: 6 (lower is better)
Translates to: SRTLDQTDATGQ*GLSDKQQHPLP
Trigger: AGGGAGTGGATGTTGCTGCTTGTCACTTAGTCCCCACTGTCCTGTGGCATCTGTTTGGTCTAAGGTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520316.5
CDS TCA 72 bp AGCATCTTCTCCAGGTTGAGACTTCCACTGCATCCTTaGGAGGAGAAGGTAACAGCCTGCAAATGGATCACA +
Preference number: 6 (lower is better)
Translates to: SIFSRLRLPLHP*EEKVTACKWIT
Trigger: TGTGATCCATTTGCAGGCTGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523076.1
CDS TCA 72 bp AGCCATCAGTCACACTACTACAGGGTGGCTCTGGTATaGGAAGATAGCTTTCCACTGGCTGTAGATAGGCTT +
Preference number: 6 (lower is better)
Translates to: SHQSHYYRVALV*EDSFPLAVDRL
Trigger: AAGCCTATCTACAGCCAGTGGAAAGCTATCTTCTCATACCAGAGCCACCCTGTAGTAGTGTGACTGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520831.1
CDS GCA 72 bp GATTTGAATTTGAGCACATTGCATGGTAAGGTTGGGTaGCCTGACAGGCAATACGTGGGTCAACTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: DLNLSTLHGKVG*PDRQYVGQLSA
Trigger: TGCACTCAGTTGACCCACGTATTGCCTGTCAGGGCACCCAACCTTACCATGCAATGTGCTCAAATTCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520184.1
CDS CCA 72 bp AAGCATTTCCATCCTTCAGGGACCAGCCAGGAAGATTaGACAGCCTGGGACAGTTTCATAATGGACTTTTGG +
Preference number: 6 (lower is better)
Translates to: KHFHPSGTSQED*TAWDSFIMDFW
Trigger: CCAAAAGTCCATTATGAAACTGTCCCAGGCTGTCCAATCTTCCTGGCTGGTCCCTGAAGGATGGAAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522363.5
CDS CAA 90 bp GTCATGTCCAGTCCGCAGTCCAACATAATGGTGGTTGATTTGAATTaGAGCACATTGCATGGTAAGGTTGGGTGCCCTGACAGGCAATAC +
Preference number: 6 (lower is better)
Translates to: VMSSPQSNIMVVDLN*STLHGKVGCPDRQY
Trigger: GTATTGCCTGTCAGGGCACCCAACCTTACCATGCAATGTGCTCAAATTCAAATCAACCACCATTATGTTGGACTGCGGACTGGACATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000416984.6
ENST00000518510.5
ENST00000520184.1
ENST00000520831.1
ENST00000520983.5
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
ENST00000523436.5
CDS CAA 90 bp GTAGAAGTCATGTCCAGTCCGCAGTCCAACATAATGGTGGTTGATTaGAATTTGAGCACATTGCATGGTAAGGTTGGGTGCCCTGACAGG +
Preference number: 6 (lower is better)
Translates to: VEVMSSPQSNIMVVD*NLSTLHGKVGCPDR
Trigger: CCTGTCAGGGCACCCAACCTTACCATGCAATGTGCTCAAATTCAAATCAACCACCATTATGTTGGACTGCGGACTGGACATGACTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000416984.6
ENST00000518510.5
ENST00000520184.1
ENST00000520831.1
ENST00000520983.5
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
ENST00000523436.5
CDS TCA 72 bp TTCATAATGGACTTTTGGTGGTTCAATAGCAGTCACTaGACTCCTCAAACCCAGGAAGCGTCTTCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: FIMDFWWFNSSH*TPQTQEASSGA
Trigger: TGCACCGGAAGACGCTTCCTGGGTTTGAGGAGTTCAGTGACTGCTATTGAACCACCAAAAGTCCATTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416984.6
ENST00000520831.1
ENST00000521022.6
CDS TCA 72 bp GGTAAACAGAATTCCGGCACAGAATCCACAAATACATaGCCCGAGCACTCCTTTAGCTCCTTGTCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: GKQNSGTESTNT*PEHSFSSLSKK
Trigger: TTTCTTGGACAAGGAGCTAAAGGAGTGCTCGGGTCATGTATTTGTGGATTCTGTGCCGGAATTCTGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000518510.5
ENST00000520184.1
ENST00000520983.5
ENST00000521022.6
ENST00000521777.5
ENST00000523303.5
ENST00000523436.5
ENST00000524081.5
CDS CCA 72 bp GTCCTGGAGATCTTCATCAGCTGTCGCATGCTTGGATaGAATATGAATAGTAAAGCCGGAGCAAACATCGAA +
Preference number: 6 (lower is better)
Translates to: VLEIFISCRMLG*NMNSKAGANIE
Trigger: TTCGATGTTTGCTCCGGCTTTACTATTCATATTCCATCCAAGCATGCGACAGCTGATGAAGATCTCCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521070.1
CDS TCA 72 bp AGATCTTCATCAGCTGTCGCATGCTTGGATGGAATATaGATAGTAAAGCCGGAGCAAACATCGAATTCCCAC +
Preference number: 6 (lower is better)
Translates to: RSSSAVACLDGI*IVKPEQTSNSH
Trigger: GTGGGAATTCGATGTTTGCTCCGGCTTTACTATTCATATTCCATCCAAGCATGCGACAGCTGATGAAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521070.1
CDS CAA 72 bp TGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTaGGTCCATGGGAATTTTCTGAGAATATCCCACCAG +
Preference number: 6 (lower is better)
Translates to: CQNKNIAVFERS*VHGNFLRISHQ
Trigger: CTGGTGGGATATTCTCAGAAAATTCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523436.5
CDS GCA 72 bp GATTTGAATTTGAGCACATTGCATGGTAAGGTTGGGTaGCCTGACAGGCAATACAGTTTCATAATGGACTTT +
Preference number: 6 (lower is better)
Translates to: DLNLSTLHGKVG*PDRQYSFIMDF
Trigger: AAAGTCCATTATGAAACTGTATTGCCTGTCAGGGCACCCAACCTTACCATGCAATGTGCTCAAATTCAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416984.6
ENST00000518510.5
ENST00000520831.1
ENST00000520983.5
ENST00000521022.6
ENST00000523303.5
ENST00000523436.5
CDS CAA 90 bp GGTAAGCCCTGTCAGAACAAGAACATCGCTGTTTTTGAGAGAAGCTaGGTCCATGGGCTGAAAAAGAACACAGAAATATGGTTAGTAATT +
Preference number: 6 (lower is better)
Translates to: GKPCQNKNIAVFERS*VHGLKKNTEIWLVI
Trigger: AATTACTAACCATATTTCTGTGTTCTTTTTCAGCCCATGGACCAAGCTTCTCTCAAAAACAGCGATGTTCTTGTTCTGACAGGGCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522074.1
CDS TCA 72 bp ACAGCCTGCAAATGGATCACAATGTCAACTACCAGGTaGACATTTCTTCATGTTCTACAGCATTCCTTTCTA +
Preference number: 6 (lower is better)
Translates to: TACKWITMSTTR*TFLHVLQHSFL
Trigger: TAGAAAGGAATGCTGTAGAACATGAAGAAATGTTCACCTGGTAGTTGACATTGTGATCCATTTGCAGGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523076.1
CDS CCA 72 bp ACTATATGGCCAAAATCATTAGTTGTCTCAGTTAAATaGGTGAGTGGCTGTCAAAAAGGGTCTATTGTATCC +
Preference number: 6 (lower is better)
Translates to: TIWPKSLVVSVK*VSGCQKGSIVS
Trigger: GGATACAATAGACCCTTTTTGACAGCCACTCACCCATTTAACTGAGACAACTAATGATTTTGGCCATATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521070.1
CDS GCA 72 bp ATGATGAATGTGATTCTAAGAATAGCAGCAGGTCTCTaGACACGTAAGTCACTTTTAAGCATTATCTATAGT +
Preference number: 6 (lower is better)
Translates to: MMNVILRIAAGL*TRKSLLSIIYS
Trigger: ACTATAGATAATGCTTAAAAGTGACTTACGTGTGCAGAGACCTGCTGCTATTCTTAGAATCACATTCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521070.1