RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INTS6L (Homo sapiens)

Ensembl gene IDs: ENSG00000165359

Ensembl transcript IDs: ENST00000370752.4, ENST00000481429.1, ENST00000481908.5, ENST00000493637.6, ENST00000494957.5, ENST00000639893.2

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTaGAATGGCAAAGTTCAAGTGAGTGACCTCTCATTACCCGTGGTA +
Preference number: 1 (lower is better)
Translates to: VVLHLQVAPRHSENA*NGKVQVSDLSLPVV
Trigger: TACCACGGGTAATGAGAGGTCACTCACTTGAACTTTGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR CCA 90 bp TCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTaGCCCCTCGCCACTCTGAGAATGCCTGGAATGGCAAAGTTCAAG +
Preference number: 1 (lower is better)
Translates to: SEGHSKSTKLCSTCR*PLATLRMPGMAKFK
Trigger: CTTGAACTTTGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR GCA 90 bp ATTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTaGAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATGGCAAAG +
Preference number: 1 (lower is better)
Translates to: ILSEGHSKSTKLCST*RWPLATLRMPGMAK
Trigger: CTTTGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR GCA 90 bp TGTACACCTATTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTaGTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGA +
Preference number: 1 (lower is better)
Translates to: CTPILSEGHSKSTKL*STCRWPLATLRMPG
Trigger: TCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAATAGGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR CCA 90 bp TCTGAAGACTTTCTATCATCACATGCAAGAACAAATGTCAGAGGTTaGGGGCAGCCTCAAGTGCACTTTGTAATGTCTCTAGACAAAAGA +
Preference number: 1 (lower is better)
Translates to: SEDFLSSHARTNVRG*GQPQVHFVMSLDKR
Trigger: TCTTTTGTCTAGAGACATTACAAAGTGCACTTGAGGCTGCCCCCAACCTCTGACATTTGTTCTTGCATGTGATGATAGAAAGTCTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR CAA 90 bp TTCTGTACACCTATTCTTTCTGAAGGACACAGTAAGAGCACCAAGTaGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCT +
Preference number: 2 (lower is better)
Translates to: FCTPILSEGHSKSTK*CSTCRWPLATLRMP
Trigger: AGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAATAGGTGTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCAAAAGCCCCACTGCTaGTTCTTAGCATCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFQKPHC*FLASGK
Trigger: CTTTCCAGATGCTAAGAAGCAGCAGTGGGGCTTTTG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR GCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCCAAAAGCCCCACTGCTaGTTCTTAGCATCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGQKPHC*FLASGK
Trigger: CTTTCCAGATGCTAAGAAGCAGCAGTGGGGCTTTTG...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR TCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGGGCCCCTCGCCACTCTaGGAATGCCTGGAATGGCAA +
Preference number: 2 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLGPSPL*ECLEWQ
Trigger: TTGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCC...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAGGCCCCTCGCCACTCTaGGAATGCCTGGAATGGCAA +
Preference number: 2 (lower is better)
Translates to: LCFQSTECISPSEDFLSSGPSPL*ECLEWQ
Trigger: TTGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCC...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCTGCTTCTTAGCATCTaGAAAGCAATTCCCTTGACT +
Preference number: 2 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFLLLSI*KAIPLT
Trigger: AGTCAAGGGAATTGCTTTCCAGATGCTAAGAAGCAG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR GCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAAGTTGTGCTCCACTTaGAGGTGGCCCCTCGCCACT +
Preference number: 2 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSKLCST*RWPLAT
Trigger: AGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAAGCCCAGCTTTCACTaGCAGATAATCATAAAATTC +
Preference number: 2 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFKPSFH*QIIIKF
Trigger: GAATTTTATGATTATCTGGCAGTGAAAGCTGGGCTT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAAAGAGCACCAAGTTGTaGTCCACTTGCAGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LCFQSTECISPSEDFLSSKSTKL*STCRWP
Trigger: GGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR TCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGATGGCAAAGTTCAAGTaGGTGACCTCTCATTACCCG +
Preference number: 2 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLMAKFK*VTSHYP
Trigger: CGGGTAATGAGAGGTCACTCACTTGAACTTTGCCAT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCACTCTGAGAATGCCTaGAATGGCAAAGTTCAAGTG +
Preference number: 2 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLHSENA*NGKVQV
Trigger: CACTTGAACTTTGCCATTCCAGGCATTCTCAGAGTG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCACTCTGAGAATGCCTaGAATGGCAAAGTTCAAGTG +
Preference number: 2 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSHSENA*NGKVQV
Trigger: CACTTGAACTTTGCCATTCCAGGCATTCTCAGAGTG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACTGCTTCTTAGCATCTaGAAAGCAATTCCCTTGACT +
Preference number: 2 (lower is better)
Translates to: LCFQSTECISPSEDFLSSLLLSI*KAIPLT
Trigger: AGTCAAGGGAATTGCTTTCCAGATGCTAAGAAGCAG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR TCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGACCGAATTTAGCCTGTaGATTAATAACATCAGCTTC +
Preference number: 2 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLTEFSL*INNISF
Trigger: GAAGCTGATGTTATTAATTCACAGGCTAAATTCGGT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAACCGAATTTAGCCTGTaGATTAATAACATCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LCFQSTECISPSEDFLSSTEFSL*INNISF
Trigger: GAAGCTGATGTTATTAATTCACAGGCTAAATTCGGT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAAAGCCCAGCTTTCACTaGCAGATAATCATAAAATTC +
Preference number: 2 (lower is better)
Translates to: LCFQSTECISPSEDFLSSKPSFH*QIIIKF
Trigger: GAATTTTATGATTATCTGGCAGTGAAAGCTGGGCTT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR GCA 72 bp GAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTaGAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGA +
Preference number: 3 (lower is better)
Translates to: EGHSKSTKLCST*RWPLATLRMPG
Trigger: TCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR CCA 72 bp CACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTaGCCCCTCGCCACTCTGAGAATGCCTGGAATGGCA +
Preference number: 3 (lower is better)
Translates to: HSKSTKLCSTCR*PLATLRMPGMA
Trigger: TGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR GCA 72 bp ATTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTaGTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGA +
Preference number: 3 (lower is better)
Translates to: ILSEGHSKSTKL*STCRWPLATLR
Trigger: TCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR CCA 72 bp CACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTaGAATGGCAAAGTTCAAGTGAGTGACCTCTCATTA +
Preference number: 3 (lower is better)
Translates to: HLQVAPRHSENA*NGKVQVSDLSL
Trigger: TAATGAGAGGTCACTCACTTGAACTTTGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCAAGTTGTGCTCCACTaGCAGGTGGCCCCTCGCCAC +
Preference number: 3 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLQVVLH*QVAPRH
Trigger: GTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCAAGTTGTGCTCCACTaGCAGGTGGCCCCTCGCCAC +
Preference number: 3 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSQVVLH*QVAPRH
Trigger: GTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAGTAAGAGCACCAAGTaGTGCTCCACTTGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSSKSTK*CSTCRW
Trigger: CCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
3UTR-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATTGGAGGTAGATTGTTaGGTGACTCTCCCTGCCCCT +
Preference number: 3 (lower is better)
Translates to: LCFQSTECISPSEDFLSSLEVDC*VTLPAP
Trigger: AGGGGCAGGGAGAGTCACCAAACAATCTACCTCCAA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATCTTCCCCCGCACTCCTaGCTCCGCTCCCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNLPPHS*LRSPLS
Trigger: GGAGAGTGGGGAGCGGAGGCAGGAGTGCGGGGGAAG...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTGGGAACCACGAGGCTaGGGGTGGTCCCTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNWEPRG*GWSLSA
Trigger: GGCGGAAAGGGACCACCCTCAGCCTCGTGGTTCCCA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTGCTGCCACCACTACTaGCGCTGCCAGGACTACTGC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNCCHHY*RCQDYC
Trigger: GCAGTAGTCCTGGCAGCGGCAGTAGTGGTGGCAGCA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATCCCAGGTCAGTGCGCTaGTTCATAGAGGCGGACGTG +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNPRSVR*FIEADV
Trigger: CACGTCCGCCTCTATGAACCAGCGCACTGACCTGGG...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATGGGGTTCGTCGTAGGTaGCCAGCATGTACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNGVRRR*PACTCL
Trigger: GAGACAGGTACATGCTGGTCACCTACGACGAACCCC...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATCCTTCCAACCAGCCTTaGTGCAGTACGGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNPSNQP*CSTGVR
Trigger: ACGAACCCCCGTACTGCATCAAGGCTGGTTGGAAGG...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATCACCACTACTGCCGCTaGCAGGACTACTGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNHHYCR*QDYCLS
Trigger: GCTTAGGCAGTAGTCCTGGCAGCGGCAGTAGTGGTG...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCCTCTCCCGGCCCTCTTaGCCTCACTGCCGCGTACGG +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGLSRPS*PHCRVR
Trigger: CCGTACGCGGCAGTGAGGGCAAGAGGGCCGGGAGAG...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATAAGTTGTGCTCCACTTaGAGGTGGCCCCTCGCCACT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNKLCST*RWPLAT
Trigger: AGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCCGCTGCCAGGACTACTaGCTAAGCATCCGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGRCQDY*LSIRPR
Trigger: GCGCGGACGGATGCTTAGGCAGTAGTCCTGGCAGCG...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCCCTCTTGCCCTCACTaGCGCGTACGGCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFPSCPH*RVRPPE
Trigger: TTCAGGTGGCCGTACGCGGCAGTGAGGGCAAGAGGG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTGTCCAAATAAGAGGTaGCCAGGTCAGTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNCPNKR*PGQCAG
Trigger: ACCAGCGCACTGACCTGGGCACCTCTTATTTGGACA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCGGATGGGACCGCTCCTaGCCTCCTCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGGWDRS*PPLSAA
Trigger: GGCTGCAGAAAGAGGAGGCCAGGAGCGGTCCCATCC...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCGGCCCCTCGCCACTCTaGGAATGCCTGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGGPSPL*ECLEWQ
Trigger: TTGCCATTCCAGGCATTCTCAGAGTGGCGAGGGGCC...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTTGCTGCCACCACTACTaGCGCTGCCAGGACTACTGC +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFCCHHY*RCQDYC
Trigger: GCAGTAGTCCTGGCAGCGGCAGTAGTGGTGGCAGCA...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTTTGGTGACTCTCCCTaGCCCTTCCCACAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNFGDSP*PFPQRN
Trigger: ATTTCTCTGTGGGAAGGGGCAGGGAGAGTCACCAAA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCCCAGGTCAGTGCGCTaGTTCATAGAGGCGGACGTG +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFPRSVR*FIEADV
Trigger: CACGTCCGCCTCTATGAACCAGCGCACTGACCTGGG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCCCTTCCAACCAGCCTTaGTGCAGTACGGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGPSNQP*CSTGVR
Trigger: ACGAACCCCCGTACTGCATCAAGGCTGGTTGGAAGG...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTGCAGTCTTTTGGGTTaGTCTGGATCAATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNCSLLG*SGSISR
Trigger: GCGAGAGATTGATCCAGACCAACCCAAAAGACTGCA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATATTGCTTGGCCTGGATaGATCCATAAGTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNIAWPG*IHKSIF
Trigger: GAAGATGGACTTATGGATTCATCCAGGCCAAGCAAT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCGGTACGCTCCCTAGTTaGTCTGGTTCGGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGGTLPS*SGSVEA
Trigger: GGCTTCTACCGAACCAGAGCAACTAGGGAGCGTACC...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATAGCTCCCAAAGTAGATaGTACTGGGTCTTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNSSQSR*YWVFLV
Trigger: GACCAAAAAGACCCAGTAGCATCTACTTTGGGAGCT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAAGAGCACCAAGTTGTaGTCCACTTGCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGKSTKL*STCRWP
Trigger: GGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATCACTCTGAGAATGCCTaGAATGGCAAAGTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNHSENA*NGKVQV
Trigger: CACTTGAACTTTGCCATTCCAGGCATTCTCAGAGTG...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTGAGGATCTTAGAGCCTaGCCGAGAGTAGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFEDLRA*PRVVSP
Trigger: TGGACTGACTACTCTCGGTCAGGCTCTAAGATCCTC...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCTTCCCCCGCACTCCTaGCTCCGCTCCCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLLPPHS*LRSPLS
Trigger: GGAGAGTGGGGAGCGGAGGCAGGAGTGCGGGGGAAG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTTTGTTTTGTGGCCCTaGTACAAACTCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNFVLWP*YKLICF
Trigger: GAAGCAGATGAGTTTGTAGCAGGGCCACAAAACAAA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATAGCATTGATTCCTTGTaGCATAGCAGGAGTGATTTG +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNSIDSL*HSRSDL
Trigger: CAAATCACTCCTGCTATGGCACAAGGAATCAATGCT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTACCTGCCAGCAGGTATaGGGAGACTTTCGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFTCQQV*GDFRSK
Trigger: CTTGGAACGAAAGTCTCCCCATACCTGCTGGCAGGT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTTAATTCCAATTTCCTaGGGAGGTTTCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNLIPIS*GGFFPT
Trigger: AGTGGGGAAGAAACCTCCCCAGGAAATTGGAATTAA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATGATTGGATCTCATTCTaGTCAGCTGGTCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNDWISF*SAGLKD
Trigger: GTCTTTTAGACCAGCTGACCAGAATGAGATCCAATC...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATACCCATTTGTGCAACTaGAACACTATGAAGGGAATC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNTHLCN*NTMKGI
Trigger: GATTCCCTTCATAGTGTTCCAGTTGCACAAATGGGT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTCGTCTTTTAAACCTTaGGGCTTCCTTGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNSSFKP*GFLDGK
Trigger: TTTACCATCAAGGAAGCCGCAAGGTTTAAAAGACGA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTTTCTCACTGGTCTTTaGACTAACATGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNFLTGL*TNMMIC
Trigger: GCAGATCATCATGTTAGTGCAAAGACCAGTGAGAAA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTCGCCACTTCAGATTTaGCTTAAGCTTGTGAACTTT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNSPLQI*LKLVNF
Trigger: AAAGTTCACAAGCTTAAGCCAAATCTGAAGTGGCGA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCCCTTTCCGCCCACATaGTTAGTTACAGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFPFPPT*LVTVGG
Trigger: ACCACCTACTGTAACTAACCATGTGGGCGGAAAGGG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCCGCGTACGGCCACCTaGACCCTCAACTCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLPRTAT*TLNSRR
Trigger: TCTGCGAGAGTTGAGGGTTCAGGTGGCCGTACGCGG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATAGTGAAGGTAAATTCTaGTCTGGCCAAAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNSEGKF*SGQKDS
Trigger: AGAATCTTTTTGGCCAGATCAGAATTTACCTTCACT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAACCTCACAACAGGATaGGATGTTCGTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGNLTTG*DVRGGS
Trigger: ACTACCTCCACGAACATCTCATCCTGTTGTGAGGTT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAACCTCACAACAGGATaGGATGTTCGTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFNLTTG*DVRGGS
Trigger: ACTACCTCCACGAACATCTCATCCTGTTGTGAGGTT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATCTAAAATTTTTATTGTaGGTCAAGGACATGCCACCT +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNLKFLL*VKDMPP
Trigger: AGGTGGCATGTCCTTGACTCACAATAAAAATTTTAG...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATGGGAACCACGAGGCTaGGGGTGGTCCCTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSWEPRG*GWSLSA
Trigger: GGCGGAAAGGGACCACCCTCAGCCTCGTGGTTCCCA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCATCTACGGAGAGACTaGAGTTTTTGGCTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFHLRRD*SFWLLL
Trigger: TAGGAGGAGCCAAAAACTGCAGTCTCTCCGTAGATG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATGTTCTGACTCTAGTTTaGTTAATAGGTAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNVLTLV*LIGSME
Trigger: CTCCATACTACCTATTAACCAAACTAGAGTCAGAAC...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370752.4
CDS-3UTR CCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCCTCATTCTGGTCAGCTaGTCTAAAAGACCTCTACGG +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGLILVS*SKRPLR
Trigger: CCGTAGAGGTCTTTTAGACCAGCTGACCAGAATGAG...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCTCTTTTGGGTTGGTCTaGATCAATCTCTCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGSFGLV*INLSQW
Trigger: CCACTGCGAGAGATTGATCCAGACCAACCCAAAAGA...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAGTAGGTGGTGTTTGTaGTTTCCTCAACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGSRWCL*FPQQQG
Trigger: TCCCTGCTGTTGAGGAAACCACAAACACCACCTACT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCCGCGTACGGCCACCTaGACCCTCAACTCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSPRTAT*TLNSRR
Trigger: TCTGCGAGAGTTGAGGGTTCAGGTGGCCGTACGCGG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAGATGGAGCTCTTCTTaGACACCAGCAGTACTTGTT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGRWSSS*TPAVLV
Trigger: AACAAGTACTGCTGGTGTTCAAGAAGAGCTCCATCT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCTTCACACATCTGTGTaGTGGCAGATTCATCAGTTG +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFLHTSV*WQIHQL
Trigger: CAACTGATGAATCTGCCATCACACAGATGTGTGAAG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCCAACTATGCCATGGCTaGGCAGCAAATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGQLCHG*AANELL
Trigger: AAGCAATTCATTTGCTGCTCAGCCATGGCATAGTTG...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCAACTATGCCATGGCTaGGCAGCAAATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFQLCHG*AANELL
Trigger: AAGCAATTCATTTGCTGCTCAGCCATGGCATAGTTG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCGTTCCAAGATATACTaGGTTAAGGGCGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFRSKIY*VKGEGS
Trigger: TGAACCTTCGCCCTTAACTCAGTATATCTTGGAACG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACGCTGCCAGGACTACTaGCTAAGCATCCGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSRCQDY*LSIRPR
Trigger: GCGCGGACGGATGCTTAGGCAGTAGTCCTGGCAGCG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACCCTCTTGCCCTCACTaGCGCGTACGGCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSPSCPH*RVRPPE
Trigger: TTCAGGTGGCCGTACGCGGCAGTGAGGGCAAGAGGG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTGAGCAGCAAATGAATTaGTTGGCCTGGATGAATCCA +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFEQQMN*LAWMNP
Trigger: TGGATTCATCCAGGCCAAGCAATTCATTTGCTGCTC...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAGCTCCCAAAGTAGATaGTACTGGGTCTTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFSSQSR*YWVFLV
Trigger: GACCAAAAAGACCCAGTAGCATCTACTTTGGGAGCT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAGGATGGGACCGCTCCTaGCCTCCTCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSGWDRS*PPLSAA
Trigger: GGCTGCAGAAAGAGGAGGCCAGGAGCGGTCCCATCC...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCGCGTTTTCAGCAGATTaGATCTCATTCTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGAFSAD*ISFWSA
Trigger: AGCTGACCAGAATGAGATCCAATCTGCTGAAAACGC...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTGCGTTTTCAGCAGATTaGATCTCATTCTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFAFSAD*ISFWSA
Trigger: AGCTGACCAGAATGAGATCCAATCTGCTGAAAACGC...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTATCAATCTCTCGCAGTaGAGAAGCCAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFINLSQ*RSQCLQ
Trigger: CTGAAGACATTGGCTTCTCCACTGCGAGAGATTGAT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAGAGACTGCAGTTTTTaGCTCCTCCTACAAATGCGT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFRDCSF*LLLQMR
Trigger: ACGCATTTGTAGGAGGAGCCAAAAACTGCAGTCTCT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGGGGAACTTGAAAGTGTaGGCGTGTGTAGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLGNLKV*ACVALG
Trigger: CCCGAGGGCTACACACGCTCACACTTTCAAGTTCCC...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAGGGCAAATAACCTTTaGTCCCAACGAAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFRANNL*SQRKGS
Trigger: AGAACCTTTTCGTTGGGATCAAAGGTTATTTGCCCT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAGGGCAAATAACCTTTaGTCCCAACGAAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGRANNL*SQRKGS
Trigger: AGAACCTTTTCGTTGGGATCAAAGGTTATTTGCCCT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCGCAACTGGAACACTATaGAGGGAATCTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGATGTL*RESSSC
Trigger: ACAAGATGAAGATTCCCTTCATAGTGTTCCAGTTGC...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCTGTGAGTCAAGGACATaGCACCTCCAGAATGATTTT +
Preference number: 4 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGCESRT*HLQNDF
Trigger: AAAATCATTCTGGAGGTGGCATGTCCTTGACTCACA...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTTTTGTTTTGTGGCCCTaGTACAAACTCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFFVLWP*YKLICF
Trigger: GAAGCAGATGAGTTTGTAGCAGGGCCACAAAACAAA...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTTTAATTCCAATTTCCTaGGGAGGTTTCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFLIPIS*GGFFPT
Trigger: AGTGGGGAAGAAACCTCCCCAGGAAATTGGAATTAA...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTACCCATTTGTGCAACTaGAACACTATGAAGGGAATC +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFTHLCN*NTMKGI
Trigger: GATTCCCTTCATAGTGTTCCAGTTGCACAAATGGGT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTGGGAACTTGAAAGTGTaGGCGTGTGTAGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSGNLKV*ACVALG
Trigger: CCCGAGGGCTACACACGCTCACACTTTCAAGTTCCC...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTACCTTCTCAAGGTACTaGATTAGGACTCGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFTFSRY*IRTRLL
Trigger: TAAAAGACGAGTCCTAATTCAGTACCTTGAGAAGGT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAAGTATGCAGTCTTTTaGGTTGGTCTGGATCAATCT +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFKYAVF*VGLDQS
Trigger: AGATTGATCCAGACCAACCCAAAAGACTGCATACTT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTGTTAGTTACAGTAGGTaGTGTTTGTGGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFVSYSR*CLWFPQ
Trigger: TTGAGGAAACCACAAACACCACCTACTGTAACTAAC...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTACAACTAGGAATTGTTaGAAACTTTGTTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFTTRNC*KLCSAH
Trigger: GTGTGCTGAACAAAGTTTTCAACAATTCCTAGTTGT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAAGAGCACCAAGTTGTaGTCCACTTGCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSKSTKL*STCRWP
Trigger: GGGCCACCTGCAAGTGGAGCACAACTTGGTGCTCTT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCTTTCTATCATCACATaGAAGAACAAATGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFLSIIT*KNKCQR
Trigger: CCTCTGACATTTGTTCTTGCATGTGATGATAGAAAG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTTTTAAGAGCCCAATTTaGAAGCCAGCAAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFFKSPI*KPANSL
Trigger: CAAAGAATTTGCTGGCTTCCAAATTGGGCTCTTAAA...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCCGCCTTCTCTTAGATaGCATAGGACTGTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLPPSLR*HRTVGF
Trigger: GAACCCAACAGTCCTATGTCATCTAAGAGAAGGCGG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAACCTGCCAGCAGGTATaGGGAGACTTTCGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSTCQQV*GDFRSK
Trigger: CTTGGAACGAAAGTCTCCCCATACCTGCTGGCAGGT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCCCTTTCCGCCCACATaGTTAGTTACAGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLPFPPT*LVTVGG
Trigger: ACCACCTACTGTAACTAACCATGTGGGCGGAAAGGG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACCGCCTTCTCTTAGATaGCATAGGACTGTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSPPSLR*HRTVGF
Trigger: GAACCCAACAGTCCTATGTCATCTAAGAGAAGGCGG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCAAAAGCCCCACTGCTaGTTCTTAGCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLQKPHC*FLASGK
Trigger: CTTTCCAGATGCTAAGAAGCAGCAGTGGGGCTTTTG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATTTGGTGACTCTCCCTaGCCCTTCCCACAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSFGDSP*PFPQRN
Trigger: ATTTCTCTGTGGGAAGGGGCAGGGAGAGTCACCAAA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGGCTACTGGGTCTTTTTaGTCATCTACGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLATGSF*SSTERL
Trigger: CAGTCTCTCCGTAGATGACCAAAAAGACCCAGTAGC...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGATTGCTTGGCCTGGATaGATCCATAAGTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLIAWPG*IHKSIF
Trigger: GAAGATGGACTTATGGATTCATCCAGGCCAAGCAAT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCTAGTAACAAATACCTaGCAGCAGGTATGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSLVTNT*QQVWGD
Trigger: GTCTCCCCATACCTGCTGGCAGGTATTTGTTACTAG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACTAGTAACAAATACCTaGCAGCAGGTATGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSLVTNT*QQVWGD
Trigger: GTCTCCCCATACCTGCTGGCAGGTATTTGTTACTAG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCATCTACGGAGAGACTaGAGTTTTTGGCTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSHLRRD*SFWLLL
Trigger: TAGGAGGAGCCAAAAACTGCAGTCTCTCCGTAGATG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAACTCCACAGCGCCTTTaGCAATGTCCAAATAAGAGG +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSTPQRL*QCPNKR
Trigger: CCTCTTATTTGGACATTGCCAAAGGCGCTGTGGAGT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCTCATTCTGGTCAGCTaGTCTAAAAGACCTCTACGG +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSLILVS*SKRPLR
Trigger: CCGTAGAGGTCTTTTAGACCAGCTGACCAGAATGAG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATGCAGTCTTTTGGGTTaGTCTGGATCAATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSCSLLG*SGSISR
Trigger: GCGAGAGATTGATCCAGACCAACCCAAAAGACTGCA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGACTGTTGGGTTCCCCTaGACGTTTCACTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLTVGFP*TFHFVL
Trigger: CAAAACAAAGTGAAACGTCCAGGGGAACCCAACAGT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAGTAGGTGGTGTTTGTaGTTTCCTCAACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSSRWCL*FPQQQG
Trigger: TCCCTGCTGTTGAGGAAACCACAAACACCACCTACT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAGATGGAGCTCTTCTTaGACACCAGCAGTACTTGTT +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSRWSSS*TPAVLV
Trigger: AACAAGTACTGCTGGTGTTCAAGAAGAGCTCCATCT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCTTCACACATCTGTGTaGTGGCAGATTCATCAGTTG +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSLHTSV*WQIHQL
Trigger: CAACTGATGAATCTGCCATCACACAGATGTGTGAAG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACGTTCCAAGATATACTaGGTTAAGGGCGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSRSKIY*VKGEGS
Trigger: TGAACCTTCGCCCTTAACTCAGTATATCTTGGAACG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGTTCTGTCAGTCTAAGTaGAGTTTCCCCTGTGATTTC +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLFCQSK*SFPCDF
Trigger: GAAATCACAGGGGAAACTGCACTTAGACTGACAGAA...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTATCAATCTCTCGCAGTaGAGAAGCCAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSINLSQ*RSQCLQ
Trigger: CTGAAGACATTGGCTTCTCCACTGCGAGAGATTGAT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTACTGTTGGGTTCCCCTaGACGTTTCACTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSTVGFP*TFHFVL
Trigger: CAAAACAAAGTGAAACGTCCAGGGGAACCCAACAGT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAAGAGACTGCAGTTTTTaGCTCCTCCTACAAATGCGT +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSRDCSF*LLLQMR
Trigger: ACGCATTTGTAGGAGGAGCCAAAAACTGCAGTCTCT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCTGCTTCTTAGCATCTaGAAAGCAATTCCCTTGACT +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLLLLSI*KAIPLT
Trigger: AGTCAAGGGAATTGCTTTCCAGATGCTAAGAAGCAG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAGCAACTGGAACACTATaGAGGGAATCTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSATGTL*RESSSC
Trigger: ACAAGATGAAGATTCCCTTCATAGTGTTCCAGTTGC...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATGTGAGTCAAGGACATaGCACCTCCAGAATGATTTT +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSCESRT*HLQNDF
Trigger: AAAATCATTCTGGAGGTGGCATGTCCTTGACTCACA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTTTCTGTCAGTCTAAGTaGAGTTTCCCCTGTGATTTC +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSFCQSK*SFPCDF
Trigger: GAAATCACAGGGGAAACTGCACTTAGACTGACAGAA...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAGCATTGATTCCTTGTaGCATAGCAGGAGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSSIDSL*HSRSDL
Trigger: CAAATCACTCCTGCTATGGCACAAGGAATCAATGCT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGTCGTCTTTTAAACCTTaGGGCTTCCTTGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLSSFKP*GFLDGK
Trigger: TTTACCATCAAGGAAGCCGCAAGGTTTAAAAGACGA...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGTTTCTCACTGGTCTTTaGACTAACATGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLFLTGL*TNMMIC
Trigger: GCAGATCATCATGTTAGTGCAAAGACCAGTGAGAAA...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTGATTGGATCTCATTCTaGTCAGCTGGTCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSDWISF*SAGLKD
Trigger: GTCTTTTAGACCAGCTGACCAGAATGAGATCCAATC...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGAAGTATGCAGTCTTTTaGGTTGGTCTGGATCAATCT +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLKYAVF*VGLDQS
Trigger: AGATTGATCCAGACCAACCCAAAAGACTGCATACTT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCAAAGTAGATGCTACTaGGTCTTTTTGGTCATCTAC +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLQSRCY*VFLVIY
Trigger: GTAGATGACCAAAAAGACCCAGTAGCATCTACTTTG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCTGCTTCTTAGCATCTaGAAAGCAATTCCCTTGACT +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSLLLSI*KAIPLT
Trigger: AGTCAAGGGAATTGCTTTCCAGATGCTAAGAAGCAG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAACCTTCTCAAGGTACTaGATTAGGACTCGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSTFSRY*IRTRLL
Trigger: TAAAAGACGAGTCCTAATTCAGTACCTTGAGAAGGT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGAAGCCCAGCTTTCACTaGCAGATAATCATAAAATTC +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLKPSFH*QIIIKF
Trigger: GAATTTTATGATTATCTGGCAGTGAAAGCTGGGCTT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCTTTCTATCATCACATaGAAGAACAAATGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLLSIIT*KNKCQR
Trigger: CCTCTGACATTTGTTCTTGCATGTGATGATAGAAAG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATCGCCACTTCAGATTTaGCTTAAGCTTGTGAACTTT +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSSPLQI*LKLVNF
Trigger: AAAGTTCACAAGCTTAAGCCAAATCTGAAGTGGCGA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAGTTAGTTACAGTAGGTaGTGTTTGTGGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSVSYSR*CLWFPQ
Trigger: TTGAGGAAACCACAAACACCACCTACTGTAACTAAC...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACAAAGTAGATGCTACTaGGTCTTTTTGGTCATCTAC +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSQSRCY*VFLVIY
Trigger: GTAGATGACCAAAAAGACCCAGTAGCATCTACTTTG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAGTGAAGGTAAATTCTaGTCTGGCCAAAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSSEGKF*SGQKDS
Trigger: AGAATCTTTTTGGCCAGATCAGAATTTACCTTCACT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACTAAAATTTTTATTGTaGGTCAAGGACATGCCACCT +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSLKFLL*VKDMPP
Trigger: AGGTGGCATGTCCTTGACTCACAATAAAAATTTTAG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR TCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTACAACTAGGAATTGTTaGAAACTTTGTTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSTTRNC*KLCSAH
Trigger: GTGTGCTGAACAAAGTTTTCAACAATTCCTAGTTGT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTATAGTTACCCATTTGTaGAACTGGAACACTATGAAG +
Preference number: 4 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSIVTHL*NWNTMK
Trigger: CTTCATAGTGTTCCAGTTGCACAAATGGGTAACTAT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR GCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAATAGTTACCCATTTGTaGAACTGGAACACTATGAAG +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSIVTHL*NWNTMK
Trigger: CTTCATAGTGTTCCAGTTGCACAAATGGGTAACTAT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CCA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATTTAAGAGCCCAATTTaGAAGCCAGCAAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LCFQSTECISPSEDFLSSFKSPI*KPANSL
Trigger: CAAAGAATTTGCTGGCTTCCAAATTGGGCTCTTAAA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS TCA 90 bp CCCACTCTCCCGGCCCTCTTGCCCTCACTGCCGCGTACGGCCACCTaGACCCTCAACTCTCGCAGAGCCGGGGAGCAAGGAGCAAGAGGA +
Preference number: 5 (lower is better)
Translates to: PTLPALLPSLPRTAT*TLNSRRAGEQGARG
Trigger: TCCTCTTGCTCCTTGCTCCCCGGCTCTGCGAGAGTTGAGGGTTCAGGTGGCCGTACGCGGCAGTGAGGGCAAGAGGGCCGGGAGAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS GCA 90 bp CGTGTCTATGAGGAACAGCAGGATGGGCATCTTCCCCCGCACTCCTaGCTCCGCTCCCCACTCTCCCGGCCCTCTTGCCCTCACTGCCGC +
Preference number: 5 (lower is better)
Translates to: RVYEEQQDGHLPPHS*LRSPLSRPSCPHCR
Trigger: GCGGCAGTGAGGGCAAGAGGGCCGGGAGAGTGGGGAGCGGAGGCAGGAGTGCGGGGGAAGATGCCCATCCTGCTGTTCCTCATAGACACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS GCA 90 bp GGGGCCCTCCCCCTTCCTCTCTTCTGCTGCCACCACTACTGCCGCTaGCAGGACTACTGCCTAAGCATCCGTCCGCGCTCACTAGAGCGC +
Preference number: 5 (lower is better)
Translates to: GALPLPLFCCHHYCR*QDYCLSIRPRSLER
Trigger: GCGCTCTAGTGAGCGCGGACGGATGCTTAGGCAGTAGTCCTGGCAGCGGCAGTAGTGGTGGCAGCAGAAGAGAGGAAGGGGGAGGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS GCA 90 bp CTTCCTCTCTTCTGCTGCCACCACTACTGCCGCTGCCAGGACTACTaGCTAAGCATCCGTCCGCGCTCACTAGAGCGCTCGCCCCAGACT +
Preference number: 5 (lower is better)
Translates to: LPLFCCHHYCRCQDY*LSIRPRSLERSPQT
Trigger: AGTCTGGGGCGAGCGCTCTAGTGAGCGCGGACGGATGCTTAGGCAGTAGTCCTGGCAGCGGCAGTAGTGGTGGCAGCAGAAGAGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTCAAGTTGTGCTCCACTaGCAGGTGGCCCCTCGCCAC +
Preference number: 5 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFQVVLH*QVAPRH
Trigger: GTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATGAGAGACTGCAGTTTTaGGCTCCTCCTACAAATGCG +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNERLQF*APPTNA
Trigger: CGCATTTGTAGGAGGAGCCAAAAACTGCAGTCTCTC...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS GCA 90 bp CACATCTGTGTGATGGCAGATTCATCAGTTGGTACGCTCCCTAGTTaGTCTGGTTCGGTAGAAGCCACTCCAGGCAAACGCAACACCAGG +
Preference number: 5 (lower is better)
Translates to: HICVMADSSVGTLPS*SGSVEATPGKRNTR
Trigger: CCTGGTGTTGCGTTTGCCTGGAGTGGCTTCTACCGAACCAGAGCAACTAGGGAGCGTACCAACTGATGAATCTGCCATCACACAGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATATGCAGTCTTTTGGGTaGGTCTGGATCAATCTCTCG +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNMQSFG*VWINLS
Trigger: CGAGAGATTGATCCAGACCAACCCAAAAGACTGCAT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATTACAGTAGGTGGTGTTaGTGGTTTCCTCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNYSRWC*WFPQQQ
Trigger: CTGCTGTTGAGGAAACCACAAACACCACCTACTGTA...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATAGAGAATCCACTTGGTaGGGTGGCATAAGATCTCCT +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNRESTW*GGIRSP
Trigger: AGGAGATCTTATGCCACCCAACCAAGTGGATTCTCT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATATCAGCATTGATTCCTaGTGCCATAGCAGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNISIDS*CHSRSD
Trigger: ATCACTCCTGCTATGGCACAAGGAATCAATGCTGAT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGACTCTCCCGGCCCTCTaGCCCTCACTGCCGCGTACG +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLTLPAL*PSLPRT
Trigger: CGTACGCGGCAGTGAGGGCAAGAGGGCCGGGAGAGT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATGAACACCAGCAGTACTaGTTAACTTGTTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNEHQQY*LTCFHL
Trigger: CAGATGGAAACAAGTTAACAAGTACTGCTGGTGTTC...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATAAAGTATGCAGTCTTTaGGGTTGGTCTGGATCAATC +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNKVCSL*GWSGSI
Trigger: GATTGATCCAGACCAACCCAAAAGACTGCATACTTT...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAGTAAGAGCACCAAGTaGTGCTCCACTTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFSKSTK*CSTCRW
Trigger: CCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAACTCTCCCGGCCCTCTaGCCCTCACTGCCGCGTACG +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSTLPAL*PSLPRT
Trigger: CGTACGCGGCAGTGAGGGCAAGAGGGCCGGGAGAGT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAGAGTTGGAGGTAGATaGTTTGGTGACTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGRVGGR*FGDSPC
Trigger: GCAGGGAGAGTCACCAAACAATCTACCTCCAACTCT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTTGCGTTTTCAGCAGATaGGATCTCATTCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFCVFSR*DLILVS
Trigger: GCTGACCAGAATGAGATCCAATCTGCTGAAAACGCA...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTATGCAGTCTTTTGGGTaGGTCTGGATCAATCTCTCG +
Preference number: 5 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFMQSFG*VWINLS
Trigger: CGAGAGATTGATCCAGACCAACCCAAAAGACTGCAT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTTGTGCTCCACTTGCAGGTGGCCCCTCGCCACTCTGAGAATGCCTGGAATCATTCCCTTCTTATCTaGTTTAAACGGATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: QVVLHLQVAPRHSENAWNHSLLI*FKRIAK
Trigger: TTTGGCAATCCGTTTAAACAAGATAAGAAGGGAATG...ATTCCAGGCATTCTCAGAGTGGCGAGGGGCCACCTGCAAGTGGAGCACAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAGAGAATCCACTTGGTaGGGTGGCATAAGATCTCCT +
Preference number: 5 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGRESTW*GGIRSP
Trigger: AGGAGATCTTATGCCACCCAACCAAGTGGATTCTCT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCTGCTACTGGGTCTTTTaGGTCATCTACGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGCYWVF*VIYGET
Trigger: AGTCTCTCCGTAGATGACCAAAAAGACCCAGTAGCA...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS TCA 90 bp TACAAGAATGGGCTAAGTAGAGGTGAGAAGTATGATAAGGAACGGTaGGTGGAGGATGAGGTACTAATAGAGAGGGGCAGGCAAGGGACA +
Preference number: 5 (lower is better)
Translates to: YKNGLSRGEKYDKER*VEDEVLIERGRQGT
Trigger: TGTCCCTTGCCTGCCCCTCTCTATTAGTACCTCATCCTCCACTCACCGTTCCTTATCATACTTCTCACCTCTACTTAGCCCATTCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CCA 90 bp ATTAAACCTCTGCCCCATATCAACCAGCTTGCGGGTAGGACAAACTaGCAGGCAAAAGGAGAAATGGCACAGCATCAAATGATACTGACA +
Preference number: 5 (lower is better)
Translates to: IKPLPHINQLAGRTN*QAKGEMAQHQMILT
Trigger: TGTCAGTATCATTTGATGCTGTGCCATTTCTCCTTTTGCCTGCCAGTTTGTCCTACCCGCAAGCTGGTTGATATGGGGCAGAGGTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS-3UTR CAA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCCTGATAGTTACCCATTaGTGCAACTGGAACACTATG +
Preference number: 5 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGLIVTH*CNWNTM
Trigger: CATAGTGTTCCAGTTGCACAAATGGGTAACTATCAG...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAAAGTATGCAGTCTTTaGGGTTGGTCTGGATCAATC +
Preference number: 5 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFKVCSL*GWSGSI
Trigger: GATTGATCCAGACCAACCCAAAAGACTGCATACTTT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTTCCTTCCAACCAGCCTaGATGCAGTACGGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSSFQPA*MQYGGS
Trigger: CGAACCCCCGTACTGCATCAAGGCTGGTTGGAAGGA...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATCCTTCCAACCAGCCTaGATGCAGTACGGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSSFQPA*MQYGGS
Trigger: CGAACCCCCGTACTGCATCAAGGCTGGTTGGAAGGA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCAAAAAGATTCTGGAATaGGCCAATGTCCAACAGGAA +
Preference number: 5 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGKKILE*ANVQQE
Trigger: TTCCTGTTGGACATTGGCCAATTCCAGAATCTTTTT...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTCTTTCTGAAGGACACAGTAAGAGCACCAAGTTGTGCTCCACTTGCAGGTGGCTGTCCAACAATAAACTaGTGCGTTTTCAGCAGATTG +
Preference number: 5 (lower is better)
Translates to: FFLKDTVRAPSCAPLAGGCPTIN*CVFSRL
Trigger: CAATCTGCTGAAAACGCACAAGTTTATTGTTGGACA...GCCACCTGCAAGTGGAGCACAACTTGGTGCTCTTACTGTGTCCTTCAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS TCA 90 bp GTCGGCATCCCAATTGTGGAGTCACTTTGGTTCTTTGGTGAAATCTaGTGTTTTGCTCACTACTCTCCATTTCCTAAAGGCCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: VGIPIVESLWFFGEI*CFAHYSPFPKGQTS
Trigger: GGAAGTTTGGCCTTTAGGAAATGGAGAGTAGTGAGCAAAACATCAGATTTCACCAAAGAACCAAAGTGACTCCACAATTGGGATGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS-3UTR CAA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTAAGGGAATCTTCATCTaGTCCAACAATAAACTTGTG +
Preference number: 5 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFKGIFI*SNNKLV
Trigger: CACAAGTTTATTGTTGGACAAGATGAAGATTCCCTT...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CAAGTGAGTGACCTCTCATTACCCGTGGTAGGGGCAGTGGTGTTTACCGAATTTTCTTGTTTAAACGGATaGCCAAAAGTATGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: QVSDLSLPVVGAVVFTEFSCLNG*PKVCSL
Trigger: AAGACTGCATACTTTTGGCAATCCGTTTAAACAAGA...AAATTCGGTAAACACCACTGCCCCTACCACGGGTAATGAGAGGTCACTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGGATGACATAGGACTGTaGGGTTCCCCTGGACGTTTC +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLDDIGL*GSPGRF
Trigger: GAAACGTCCAGGGGAACCCAACAGTCCTATGTCATC...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS CCA 90 bp AATGTATTTGGCATAGCTCCCAAAGTAGATGCTACTGGGTCTTTTTaGTCATCTACGGAGAGACTGCAGTTTTTGGCTCCTCCTACAAAT +
Preference number: 5 (lower is better)
Translates to: NVFGIAPKVDATGSF*SSTERLQFLAPPTN
Trigger: ATTTGTAGGAGGAGCCAAAAACTGCAGTCTCTCCGTAGATGACCAAAAAGACCCAGTAGCATCTACTTTGGGAGCTATGCCAAATACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000370752.4
ENST00000481429.1
ENST00000481908.5
ENST00000493637.6
ENST00000494957.5
ENST00000639893.2
CDS CCA 90 bp TCTGAAGACTTTCTATCATCACATGCAAGAACAAATGTCAGAGGTTaGGGGCAGCCTCAAGTGCACTTTGTAATGTCTATGATGATCTGC +
Preference number: 5 (lower is better)
Translates to: SEDFLSSHARTNVRG*GQPQVHFVMSMMIC
Trigger: GCAGATCATCATAGACATTACAAAGTGCACTTGAGGCTGCCCCCAACCTCTGACATTTGTTCTTGCATGTGATGATAGAAAGTCTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481429.1
CDS CCA 90 bp TCTGAAGACTTTCTATCATCACATGCAAGAACAAATGTCAGAGGTTaGGGGCAGCCTCAAGTGCACTTTGTAATGTCTCTTCTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: SEDFLSSHARTNVRG*GQPQVHFVMSLLKV
Trigger: TACCTTGAGAAGAGACATTACAAAGTGCACTTGAGGCTGCCCCCAACCTCTGACATTTGTTCTTGCATGTGATGATAGAAAGTCTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494957.5
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAGATGACATAGGACTGTaGGGTTCCCCTGGACGTTTC +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSDDIGL*GSPGRF
Trigger: GAAACGTCCAGGGGAACCCAACAGTCCTATGTCATC...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGAGAGTTGGAGGTAGATaGTTTGGTGACTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLRVGGR*FGDSPC
Trigger: GCAGGGAGAGTCACCAAACAATCTACCTCCAACTCT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS CCA 90 bp AAAAGTATGCAGTCTTTTGGGTTGGTCTGGATCAATCTCTCGCAGTaGAGAAGCCAATGTCTTCAGATATTCCTGATAGTTACCCATTTG +
Preference number: 5 (lower is better)
Translates to: KSMQSFGLVWINLSQ*RSQCLQIFLIVTHL
Trigger: CAAATGGGTAACTATCAGGAATATCTGAAGACATTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CCA 90 bp TTGTTTAAACGGATTGCCAAAAGTATGCAGTCTTTTGGGTTGGTCTaGATCAATCTCTCGCAGTGGAGAAGCCAATGTCTTCAGATATTC +
Preference number: 5 (lower is better)
Translates to: LFKRIAKSMQSFGLV*INLSQWRSQCLQIF
Trigger: GAATATCTGAAGACATTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CCA 90 bp TTATCTTGTTTAAACGGATTGCCAAAAGTATGCAGTCTTTTGGGTTaGTCTGGATCAATCTCTCGCAGTGGAGAAGCCAATGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LSCLNGLPKVCSLLG*SGSISRSGEANVFR
Trigger: TCTGAAGACATTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTTGGCAGATTCATCAGTaGGTACGCTCCCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSWQIHQ*VRSLVA
Trigger: AGCAACTAGGGAGCGTACCAACTGATGAATCTGCCA...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATGGCAGATTCATCAGTaGGTACGCTCCCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSWQIHQ*VRSLVA
Trigger: AGCAACTAGGGAGCGTACCAACTGATGAATCTGCCA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGTGCGTTTTCAGCAGATaGGATCTCATTCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLCVFSR*DLILVS
Trigger: GCTGACCAGAATGAGATCCAATCTGCTGAAAACGCA...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACCTGGACGTTTCACTTaGTTTTGTGGCCCTGCTACA +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSPGRFT*FCGPAT
Trigger: TGTAGCAGGGCCACAAAACAAAGTGAAACGTCCAGG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCCTGGACGTTTCACTTaGTTTTGTGGCCCTGCTACA +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSPGRFT*FCGPAT
Trigger: TGTAGCAGGGCCACAAAACAAAGTGAAACGTCCAGG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAGAGAGACTGCAGTTTTaGGCTCCTCCTACAAATGCG +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSERLQF*APPTNA
Trigger: CGCATTTGTAGGAGGAGCCAAAAACTGCAGTCTCTC...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGTGCTACTGGGTCTTTTaGGTCATCTACGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLCYWVF*VIYGET
Trigger: AGTCTCTCCGTAGATGACCAAAAAGACCCAGTAGCA...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS GCA 90 bp ATCATCATTCCCTTCTTATCTTGTTTAAACGGATTGCCAAAAGTATaGAGTCTTTTGGGTTGGTCTGGATCAATCTCTCGCAGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: IIIPFLSCLNGLPKV*SLLGWSGSISRSGE
Trigger: TTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGATAAGAAGGGAATGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTTACAGTAGGTGGTGTTaGTGGTTTCCTCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSYSRWC*WFPQQQ
Trigger: CTGCTGTTGAGGAAACCACAAACACCACCTACTGTA...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGATCAGCATTGATTCCTaGTGCCATAGCAGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLISIDS*CHSRSD
Trigger: ATCACTCCTGCTATGGCACAAGGAATCAATGCTGAT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGCATCTCCAGAGGTCCTaGCACTTCTTCAAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLHLQRS*HFFKQN
Trigger: ATTTTGCTTGAAGAAGTGCAAGGACCTCTGGAGATG...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGGAACACCAGCAGTACTaGTTAACTTGTTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLEHQQY*LTCFHL
Trigger: CAGATGGAAACAAGTTAACAAGTACTGCTGGTGTTC...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCACGTTCTGACTCTAGTTaGGTCTGTTGGCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSRSDSS*VCWLSF
Trigger: AAAACTCAGCCAACAGACCAAACTAGAGTCAGAACG...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGAAAAAGATTCTGGAATaGGCCAATGTCCAACAGGAA +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLKKILE*ANVQQE
Trigger: TTCCTGTTGGACATTGGCCAATTCCAGAATCTTTTT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGAAGCCAGCAAATTCTTaGGTGTTCAATTCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLKPANS*VFNSVS
Trigger: ACTGACAGAATTGAACACCAAAGAATTTGCTGGCTT...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGTGTCCAACAATAAACTaGTGCGTTTTCAGCAGATTG +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLCPTIN*CVFSRL
Trigger: CAATCTGCTGAAAACGCACAAGTTTATTGTTGGACA...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCTGATAGTTACCCATTaGTGCAACTGGAACACTATG +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSLIVTH*CNWNTM
Trigger: CATAGTGTTCCAGTTGCACAAATGGGTAACTATCAG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp GCACTTTGTAATGTCTCTAGACAAAAGAGAAGAGAGTTGGAGGTAGATTGTTTGTCAGCACACATAAGATaGCCATTTCCTTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: ALCNVSRQKRRELEVDCLSAHIR*PFPFCT
Trigger: TGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGA...CAAACAATCTACCTCCAACTCTCTTCTCTTTTGTCTAGAGACATTACAAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAGCAGTACTTGTTAACTaGTTTCCATCTGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSAVLVN*FPSVMV
Trigger: TACCATCACAGATGGAAACAAGTTAACAAGTACTGC...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTAAGCCAGCAAATTCTTaGGTGTTCAATTCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSKPANS*VFNSVS
Trigger: ACTGACAGAATTGAACACCAAAGAATTTGCTGGCTT...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTTCAGCACACATAAGATaGCCATTTCCTTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSSAHIR*PFPFCT
Trigger: TGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGA...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCATTGATTCAACATTCTTaGTGTTCTCACACAGTAGGA +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSLIQHS*CSHTVG
Trigger: TCCTACTGTGTGAGAACACAAAGAATGTTGAATCAA...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTTTGATTCAACATTCTTaGTGTTCTCACACAGTAGGA +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSLIQHS*CSHTVG
Trigger: TCCTACTGTGTGAGAACACAAAGAATGTTGAATCAA...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp TTGTGCTTCCAAAGCACAGAATGTATAAGTCCATCTGAAGACTTTCTATCATCAAAGGGAATCTTCATCTaGTCCAACAATAAACTTGTG +
Preference number: 5 (lower is better)
Translates to: LCFQSTECISPSEDFLSSKGIFI*SNNKLV
Trigger: CACAAGTTTATTGTTGGACAAGATGAAGATTCCCTT...TGATGATAGAAAGTCTTCAGATGGACTTATACATTCTGTGCTTTGGAAGCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTTCTTGTTTAAACGGATaGCCAAAAGTATGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSSCLNG*PKVCSL
Trigger: AAGACTGCATACTTTTGGCAATCCGTTTAAACAAGA...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS-3UTR CAA 90 bp CTTTGTTCAGCACACATAAGATTGCCATTTCCTTTCTGTACACCTATTCTTTCTCATTCCCTTCTTATCTaGTTTAAACGGATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LCSAHIRLPFPFCTPILSHSLLI*FKRIAK
Trigger: TTTGGCAATCCGTTTAAACAAGATAAGAAGGGAATG...AGAAAGAATAGGTGTACAGAAAGGAAATGGCAATCTTATGTGTGCTGAACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS TCA 72 bp CCGGCCCTCTTGCCCTCACTGCCGCGTACGGCCACCTaGACCCTCAACTCTCGCAGAGCCGGGGAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: PALLPSLPRTAT*TLNSRRAGEQG
Trigger: TCCTTGCTCCCCGGCTCTGCGAGAGTTGAGGGTTCAGGTGGCCGTACGCGGCAGTGAGGGCAAGAGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS GCA 72 bp CTCCGCTCCCCACTCTCCCGGCCCTCTTGCCCTCACTaGCGCGTACGGCCACCTGAACCCTCAACTCTCGCA +
Preference number: 6 (lower is better)
Translates to: LRSPLSRPSCPH*RVRPPEPSTLA
Trigger: TGCGAGAGTTGAGGGTTCAGGTGGCCGTACGCGGCAGTGAGGGCAAGAGGGCCGGGAGAGTGGGGAGCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS GCA 72 bp GAGGAACAGCAGGATGGGCATCTTCCCCCGCACTCCTaGCTCCGCTCCCCACTCTCCCGGCCCTCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: EEQQDGHLPPHS*LRSPLSRPSCP
Trigger: AGGGCAAGAGGGCCGGGAGAGTGGGGAGCGGAGGCAGGAGTGCGGGGGAAGATGCCCATCCTGCTGTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS GCA 72 bp TGTGTAGCCCTCGGGGCCCTCCCCCTTCCTCTCTTCTaGTGCCACCACTACTGCCGCTGCCAGGACTACTGC +
Preference number: 6 (lower is better)
Translates to: CVALGALPLPLF*CHHYCRCQDYC
Trigger: GCAGTAGTCCTGGCAGCGGCAGTAGTGGTGGCAGCAGAAGAGAGGAAGGGGGAGGGCCCCGAGGGCTACACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS GCA 72 bp TTCTGCTGCCACCACTACTGCCGCTGCCAGGACTACTaGCTAAGCATCCGTCCGCGCTCACTAGAGCGCTCG +
Preference number: 6 (lower is better)
Translates to: FCCHHYCRCQDY*LSIRPRSLERS
Trigger: CGAGCGCTCTAGTGAGCGCGGACGGATGCTTAGGCAGTAGTCCTGGCAGCGGCAGTAGTGGTGGCAGCAGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000639893.2
CDS CCA 72 bp GGGCGCGCAGCTTCAAGAATAACTCCACAGCGCCTTTaGCAATGTCCAAATAAGAGGTGCCCAGGTCAGTGC +
Preference number: 6 (lower is better)
Translates to: GRAASRITPQRL*QCPNKRCPGQC
Trigger: GCACTGACCTGGGCACCTCTTATTTGGACATTGCCAAAGGCGCTGTGGAGTTATTCTTGAAGCTGCGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS GCA 72 bp GTGATGGCAGATTCATCAGTTGGTACGCTCCCTAGTTaGTCTGGTTCGGTAGAAGCCACTCCAGGCAAACGC +
Preference number: 6 (lower is better)
Translates to: VMADSSVGTLPS*SGSVEATPGKR
Trigger: GCGTTTGCCTGGAGTGGCTTCTACCGAACCAGAGCAACTAGGGAGCGTACCAACTGATGAATCTGCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CAA 72 bp GAAGAGAGGAAACTGAGCTCCACTCTTCAGTTCCCCTaGGGGTCTATCACCCTCCAGTGTGAGGAACACTGG +
Preference number: 6 (lower is better)
Translates to: EERKLSSTLQFP*GSITLQCEEHW
Trigger: CCAGTGTTCCTCACACTGGAGGGTGATAGACCCCAAGGGGAACTGAAGAGTGGAGCTCAGTTTCCTCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 72 bp CTGGTAGGAGCTGGTAAGCTCCAGACCATACTGAAGTaGTTGTCAGTTCCTAGCAAGGTGTGTCGGCATCCC +
Preference number: 6 (lower is better)
Translates to: LVGAGKLQTILK*LSVPSKVCRHP
Trigger: GGGATGCCGACACACCTTGCTAGGAACTGACAACAACTTCAGTATGGTCTGGAGCTTACCAGCTCCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 90 bp ACTGGACTGGTAGGAGCTGGTAAGCTCCAGACCATACTGAAGTTGTaGTCAGTTCCTAGCAAGGTGTGTCGGCATCCCAATTGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: TGLVGAGKLQTILKL*SVPSKVCRHPNCGV
Trigger: GACTCCACAATTGGGATGCCGACACACCTTGCTAGGAACTGACAACAACTTCAGTATGGTCTGGAGCTTACCAGCTCCTACCAGTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 90 bp CACACTGGACTGGTAGGAGCTGGTAAGCTCCAGACCATACTGAAGTaGTTGTCAGTTCCTAGCAAGGTGTGTCGGCATCCCAATTGTGGA +
Preference number: 6 (lower is better)
Translates to: HTGLVGAGKLQTILK*LSVPSKVCRHPNCG
Trigger: TCCACAATTGGGATGCCGACACACCTTGCTAGGAACTGACAACAACTTCAGTATGGTCTGGAGCTTACCAGCTCCTACCAGTCCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 72 bp CTTTCCGCCCACATGGTTAGTTACAGTAGGTGGTGTTaGTGGTTTCCTCAACAGCAGGGACATACTCCGCCT +
Preference number: 6 (lower is better)
Translates to: LSAHMVSYSRWC*WFPQQQGHTPP
Trigger: AGGCGGAGTATGTCCCTGCTGTTGAGGAAACCACAAACACCACCTACTGTAACTAACCATGTGGGCGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS CAA 90 bp ACCCATGAGAGAAGTCTATTAAACCTCTGCCCCATATCAACCAGCTaGCGGGTAGGACAAACTGGCAGGCAAAAGGAGAAATGGCACAGC +
Preference number: 6 (lower is better)
Translates to: THERSLLNLCPISTS*RVGQTGRQKEKWHS
Trigger: GCTGTGCCATTTCTCCTTTTGCCTGCCAGTTTGTCCTACCCGCAAGCTGGTTGATATGGGGCAGAGGTTTAATAGACTTCTCTCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS TCA 72 bp TTTTATGAGGTTTGGATAAGATGGGAACCACGAGGCTaGGGGTGGTCCCTTTCCGCCCACATGGTTAGTTAC +
Preference number: 6 (lower is better)
Translates to: FYEVWIRWEPRG*GWSLSAHMVSY
Trigger: GTAACTAACCATGTGGGCGGAAAGGGACCACCCTCAGCCTCGTGGTTCCCATCTTATCCAAACCTCATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS TCA 72 bp GGGCTAAGTAGAGGTGAGAAGTATGATAAGGAACGGTaGGTGGAGGATGAGGTACTAATAGAGAGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: GLSRGEKYDKER*VEDEVLIERGR
Trigger: CCTGCCCCTCTCTATTAGTACCTCATCCTCCACTCACCGTTCCTTATCATACTTCTCACCTCTACTTAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CCA 72 bp TGGTCCCTTTCCGCCCACATGGTTAGTTACAGTAGGTaGTGTTTGTGGTTTCCTCAACAGCAGGGACATACT +
Preference number: 6 (lower is better)
Translates to: WSLSAHMVSYSR*CLWFPQQQGHT
Trigger: AGTATGTCCCTGCTGTTGAGGAAACCACAAACACCACCTACTGTAACTAACCATGTGGGCGGAAAGGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370752.4
ENST00000639893.2
CDS CAA 72 bp GTAGGAGCTGGTAAGCTCCAGACCATACTGAAGTTGTaGTCAGTTCCTAGCAAGGTGTGTCGGCATCCCAAT +
Preference number: 6 (lower is better)
Translates to: VGAGKLQTILKL*SVPSKVCRHPN
Trigger: ATTGGGATGCCGACACACCTTGCTAGGAACTGACAACAACTTCAGTATGGTCTGGAGCTTACCAGCTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CCA 72 bp GGCATAGCTCCCAAAGTAGATGCTACTGGGTCTTTTTaGTCATCTACGGAGAGACTGCAGTTTTTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: GIAPKVDATGSF*SSTERLQFLAP
Trigger: AGGAGCCAAAAACTGCAGTCTCTCCGTAGATGACCAAAAAGACCCAGTAGCATCTACTTTGGGAGCTATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000370752.4
ENST00000481429.1
ENST00000481908.5
ENST00000493637.6
ENST00000494957.5
ENST00000639893.2
CDS CAA 72 bp TGGCATAGCTCCCAAAGTAGATGCTACTGGGTCTTTTaGGTCATCTACGGAGAGACTGCAGTTTTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: WHSSQSRCYWVF*VIYGETAVFGS
Trigger: GGAGCCAAAAACTGCAGTCTCTCCGTAGATGACCAAAAAGACCCAGTAGCATCTACTTTGGGAGCTATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370752.4
ENST00000481429.1
ENST00000481908.5
ENST00000493637.6
ENST00000494957.5
ENST00000639893.2
CDS CAA 72 bp GTAGCATTCCGCCTTCTCTTAGATGACATAGGACTGTaGGGTTCCCCTGGACGTTTCACTTTGTTTTGTGGC +
Preference number: 6 (lower is better)
Translates to: VAFRLLLDDIGL*GSPGRFTLFCG
Trigger: GCCACAAAACAAAGTGAAACGTCCAGGGGAACCCAACAGTCCTATGTCATCTAAGAGAAGGCGGAATGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481908.5
ENST00000493637.6
CDS TCA 72 bp ATCGTGAATGATAGTAGCATTCCGCCTTCTCTTAGATaGCATAGGACTGTTGGGTTCCCCTGGACGTTTCAC +
Preference number: 6 (lower is better)
Translates to: IVNDSSIPPSLR*HRTVGFPWTFH
Trigger: GTGAAACGTCCAGGGGAACCCAACAGTCCTATGTCATCTAAGAGAAGGCGGAATGCTACTATCATTCACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481908.5
ENST00000493637.6
CDS CCA 72 bp CGGATTGCCAAAAGTATGCAGTCTTTTGGGTTGGTCTaGATCAATCTCTCGCAGTGGAGAAGCCAATGTCTT +
Preference number: 6 (lower is better)
Translates to: RIAKSMQSFGLV*INLSQWRSQCL
Trigger: AAGACATTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CAA 72 bp AGAAGTCTATTAAACCTCTGCCCCATATCAACCAGCTaGCGGGTAGGACAAACTGGCAGGCAAAAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: RSLLNLCPISTS*RVGQTGRQKEK
Trigger: TTTCTCCTTTTGCCTGCCAGTTTGTCCTACCCGCAAGCTGGTTGATATGGGGCAGAGGTTTAATAGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS GCA 72 bp ATGCTACTGGGTCTTTTTGGTCATCTACGGAGAGACTaGAGTTTTTGGCTCCTCCTACAAATGCGTTACTAC +
Preference number: 6 (lower is better)
Translates to: MLLGLFGHLRRD*SFWLLLQMRYY
Trigger: GTAGTAACGCATTTGTAGGAGGAGCCAAAAACTGCAGTCTCTCCGTAGATGACCAAAAAGACCCAGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000370752.4
ENST00000481429.1
ENST00000481908.5
ENST00000493637.6
ENST00000494957.5
ENST00000639893.2
CDS CAA 90 bp CCCTTCTTATCTTGTTTAAACGGATTGCCAAAAGTATGCAGTCTTTaGGGTTGGTCTGGATCAATCTCTCGCAGTGGAGAAGCCAATGTC +
Preference number: 6 (lower is better)
Translates to: PFLSCLNGLPKVCSL*GWSGSISRSGEANV
Trigger: GACATTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGATAAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CAA 90 bp ACTACTCTCCATTTCCTAAAGGCCAAACTTCCAAACACATCCACCTaGAAGCATTATCACCACTGCGAATGCTACTATTGTCCCCTACCT +
Preference number: 6 (lower is better)
Translates to: TTLHFLKAKLPNTST*KHYHHCECYYCPLP
Trigger: AGGTAGGGGACAATAGTAGCATTCGCAGTGGTGATAATGCTTCAAGGTGGATGTGTTTGGAAGTTTGGCCTTTAGGAAATGGAGAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CCA 72 bp TTAAACGGATTGCCAAAAGTATGCAGTCTTTTGGGTTaGTCTGGATCAATCTCTCGCAGTGGAGAAGCCAAT +
Preference number: 6 (lower is better)
Translates to: LNGLPKVCSLLG*SGSISRSGEAN
Trigger: ATTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CAA 72 bp TTTAAACGGATTGCCAAAAGTATGCAGTCTTTTGGGTaGGTCTGGATCAATCTCTCGCAGTGGAGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: FKRIAKSMQSFG*VWINLSQWRSQ
Trigger: TTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CAA 90 bp CTTATCTTGTTTAAACGGATTGCCAAAAGTATGCAGTCTTTTGGGTaGGTCTGGATCAATCTCTCGCAGTGGAGAAGCCAATGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LILFKRIAKSMQSFG*VWINLSQWRSQCLQ
Trigger: CTGAAGACATTGGCTTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS GCA 72 bp CCCTTCTTATCTTGTTTAAACGGATTGCCAAAAGTATaGAGTCTTTTGGGTTGGTCTGGATCAATCTCTCGC +
Preference number: 6 (lower is better)
Translates to: PFLSCLNGLPKV*SLLGWSGSISR
Trigger: GCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGATAAGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CAA 72 bp TCTTGTTTAAACGGATTGCCAAAAGTATGCAGTCTTTaGGGTTGGTCTGGATCAATCTCTCGCAGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SCLNGLPKVCSL*GWSGSISRSGE
Trigger: TTCTCCACTGCGAGAGATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS TCA 72 bp CTCTGTACACTATTCTTCCTTGTGGCCATACCTTGGTaGCACAGCCTTAAAGGCTTAGGTAAACATCAAATT +
Preference number: 6 (lower is better)
Translates to: LCTLFFLVAIPW*HSLKGLGKHQI
Trigger: AATTTGATGTTTACCTAAGCCTTTAAGGCTGTGTCACCAAGGTATGGCCACAAGGAAGAATAGTGTACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 72 bp CATTTCCTAAAGGCCAAACTTCCAAACACATCCACCTaGAAGCATTATCACCACTGCGAATGCTACTATTGT +
Preference number: 6 (lower is better)
Translates to: HFLKAKLPNTST*KHYHHCECYYC
Trigger: ACAATAGTAGCATTCGCAGTGGTGATAATGCTTCAAGGTGGATGTGTTTGGAAGTTTGGCCTTTAGGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 90 bp TTCAAATCCTTGTTTAAGAGCCCAATTTGGAAGCCAGCAAATTCTTaGGTGTTCAATTCTGTCAGTCTAAGTGCAGTTTCCCCTGTGATT +
Preference number: 6 (lower is better)
Translates to: FKSLFKSPIWKPANS*VFNSVSLSAVSPVI
Trigger: AATCACAGGGGAAACTGCACTTAGACTGACAGAATTGAACACCAAAGAATTTGCTGGCTTCCAAATTGGGCTCTTAAACAAGGATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS TCA 72 bp TTTTGTGCCGCCATGACATCTCCAAACTCTTACACATaGTTTGAGAAGACAGTGACGACACAAATATCTGTA +
Preference number: 6 (lower is better)
Translates to: FCAAMTSPNSYT*FEKTVTTQISV
Trigger: TACAGATATTTGTGTCGTCACTGTCTTCTCAAATCATGTGTAAGAGTTTGGAGATGTCATGGCGGCACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 72 bp TTGTTTAAGAGCCCAATTTGGAAGCCAGCAAATTCTTaGGTGTTCAATTCTGTCAGTCTAAGTGCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: LFKSPIWKPANS*VFNSVSLSAVS
Trigger: GGAAACTGCACTTAGACTGACAGAATTGAACACCAAAGAATTTGCTGGCTTCCAAATTGGGCTCTTAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2
CDS CAA 72 bp CTTGCATTAATTAAAATCTCTGTACACTATTCTTCCTaGTGGCCATACCTTGGTGACACAGCCTTAAAGGCT +
Preference number: 6 (lower is better)
Translates to: LALIKISVHYSS*WPYLGDTALKA
Trigger: AGCCTTTAAGGCTGTGTCACCAAGGTATGGCCACAAGGAAGAATAGTGTACAGAGATTTTAATTAATGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493637.6
CDS CAA 72 bp TCAATCATCATTCCCTTCTTATCTTGTTTAAACGGATaGCCAAAAGTATGCAGTCTTTTGGGTTGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: SIIIPFLSCLNG*PKVCSLLGWSG
Trigger: TCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGATAAGAAGGGAATGATGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370752.4
ENST00000481908.5
ENST00000493637.6
ENST00000639893.2