RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INTS5 (Homo sapiens)

Ensembl gene IDs: ENSG00000185085

Ensembl transcript IDs: ENST00000330574.2

Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCACTGCTCAACCTCCCTaGGCTTCCAGAGCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPTAQPP*ASRARK
Trigger: TTTTCTTGCTCTGGAAGCCCAGGGAGGTTGAGCAGT...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCAGATCCCGCTCCACGGTaGCCCGGGCGTGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPDPAPR*PGRVPR
Trigger: CCGAGGAACACGCCCGGGCCACCGTGGAGCGGGATC...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCAGGGCCAGGCCAGCTCTaGACCAGCTGCATCGGGACA +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPGPGQL*TSCIGT
Trigger: TGTCCCGATGCAGCTGGTGCAGAGCTGGCCTGGCCC...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCACTCACGCACGGTGTCTaGCACAGCCAGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPLTHGV*HSQALG
Trigger: ACCCAGGGCCTGGCTGTGCCAGACACCGTGCGTGAG...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGTAGGAACGGAACCGTaGCCTGAAGGGAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLVGTEP*PEGRGP
Trigger: GGGACCCCTCCCTTCAGGCCACGGTTCCGTTCCTAC...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGAGGTGTTGCTGCAGCTaGCTCAGCACAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLRCCCS*LSTAGG
Trigger: GCCCCCAGCTGTGCTGAGCCAGCTGCAGCAACACCT...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCAAGCTTCCACCACTACTaGCAGCTCCACCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPSFHHY*QLHLQP
Trigger: GGGCTGGAGGTGGAGCTGGCAGTAGTGGTGGAAGCT...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCACCCAAGAGCTGGTGCTaGCAGAGGAAGCGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPPKSWC*QRKRFR
Trigger: ACGGAAGCGCTTCCTCTGGCAGCACCAGCTCTTGGG...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGAGGCCCAAGAGCTGGTaGTGCCAGAGGAAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLRPKSW*CQRKRF
Trigger: GAAGCGCTTCCTCTGGCAGCACCAGCTCTTGGGCCT...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCGGAAGCGCCGGCCAATaGGGAGATCCCGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLGSAGQ*GDPAPR
Trigger: CCGTGGAGCGGGATCTCCGCATTGGCCGGCGCTTCC...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCATCCCGGGCTGAGAGTTaGTGGCCCAGAATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPSRAES*WPRMGS
Trigger: AGACCCCATTCTGGGCCACCAACTCTCAGCCCGGGA...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGTGGACGGAGGTGAGGTaGACCAGCCACAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLWTEVR*TSHRGF
Trigger: GAAACCCCTGTGGCTGGTCCACCTCACCTCCGTCCA...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGAGCATGTTCCCGGGCTaGGAGTTGGTGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLSMFPG*ELVAQN
Trigger: ATTCTGGGCCACCAACTCTCAGCCCGGGAACATGCT...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTGGAGGTGGACGGAGGTaGGGTGGACCAGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSGGGRR*GGPATG
Trigger: CCCTGTGGCTGGTCCACCTCACCTCCGTCCACCTCC...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGAAAACCCCAGACACTaGGCAGCAGCAGACGCACCT +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLENPRH*AAADAP
Trigger: AGGTGCGTCTGCTGCTGCTCAGTGTCTGGGGTTTTC...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCACAGCTGCAGTGTaGCTCCGGTTAGTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLGTAAV*LRLVSN
Trigger: GTTGGACACTAACCGGAGGCACACTGCAGCTGTGCC...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTGCCCCCTGGGGCACTaGAGCAGTGAACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLCPLGH*SSEPGG
Trigger: GCCTCCTGGTTCACTGCTGCAGTGCCCCAGGGGGCA...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCACCTTCCCTCTCTCACTaGTCAACCTCCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPPSLSH*STSLGF
Trigger: GAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGG...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCAAGGTGCCCAGGCCTTTaGGTTGGCCCGGATAAACTC +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPRCPGL*VGPDKL
Trigger: GAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCT...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGACCAGTCCCAGGAGCTaGGAGGGGGATAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLTSPRS*EGDKAS
Trigger: TGAAGCCTTATCCCCCTCCCAGCTCCTGGGACTGGT...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCACCTGTCGAAGGAGAGTaGACGGTGAAGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPPVEGE*TVKVPG
Trigger: TCCAGGCACCTTCACCGTCCACTCTCCTTCGACAGG...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCATCCTGGGACAGCTCCTaGGCACTGAGAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSSWDSS*ALRGAG
Trigger: TCCCGCGCCTCTCAGTGCTCAGGAGCTGTCCCAGGA...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTGAGAAGCTGACAGGCTaGGGCCACACCTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPEKLTG*GHTWGS
Trigger: GGACCCCCAGGTGTGGCCTCAGCCTGTCAGCTTCTC...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCATGCACTAATCACAGGTaGCCAGGCCTTTGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPCTNHR*PGLWVG
Trigger: GCCAACCCAAAGGCCTGGGCACCTGTGATTAGTGCA...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAGGAGCTCCCGTCGGATaGTATCTCCGTGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSGAPVG*YLRGGR
Trigger: CCTCCCGCCACGGAGATAGCATCCGACGGGAGCTCC...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTGGGCCCTCGCCACCCTaGTGTTCCCACCCTACTAGC +
Preference number: 4 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSGPSPP*CSHPTS
Trigger: GCTAGTAGGGTGGGAACAGCAGGGTGGCGAGGGCCC...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGTTGGTGGCCCAGAATaGGGTCTACGCCAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLVGGPE*GLRQSE
Trigger: TTCTGACTGGCGTAGACCCCATTCTGGGCCACCAAC...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCAGAGCGCCAGTAGCGTaGGGAACACGCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLRAPVA*GTRWCW
Trigger: CCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCT...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGTTTCTCCGCAGGAATaGCAGGAGATCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLVSPQE*QEIQGR
Trigger: CCTTCCCTGGATCTCCTGCCATTCCTGCGGAGAAAC...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCACCTGCCAGGCTATCATaGAACATTCGCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPPARLS*NIRRSS
Trigger: GGAGCTCCTGCGAATGTTCCATGATAGCCTGGCAGG...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCCTGCCCCAGAGGCCTaGCTCACCAGGTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPPAPEA*LTRCTA
Trigger: GGCTGTGCACCTGGTGAGCCAGGCCTCTGGGGCAGG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCGAGAGGCTTCCCAATaGCCCAAGAGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSREASQ*PKRAAS
Trigger: GCTGGCCGCCCTCTTGGGCCATTGGGAAGCCTCTCG...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAAGGTGCCAGGGGGAGTaGGTCGTGTCAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSRCQGE*VVSGWR
Trigger: TCGCCACCCTGACACGACCCACTCCCCCTGGCACCT...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp AGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTGGGCAGCTACCAATaGGAGCCGAGAGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: RRETSTLPEHVSPFPLSLLGSYQ*EPRGTA
Trigger: TGCAGTGCCTCTCGGCTCTCATTGGTAGCTGCCCAG...CAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCGCCCAGCAAAGCTGGTaGCATGACTGCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLAQQSW*HDCQLQ
Trigger: CTGCAGCTGGCAGTCATGTCACCAGCTTTGCTGGGC...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTAGGCGGGTGAGAAGCTaGCAGGCTGAGGCCACACCT +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPRRVRS*QAEATP
Trigger: AGGTGTGGCCTCAGCCTGTCAGCTTCTCACCCGCCT...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGTGTAATGTCCCTGCATaGACCCGAGCCAGACAGCTT +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLCNVPA*TRARQL
Trigger: AAGCTGTCTGGCTCGGGTGCATGCAGGGACATTACA...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCAGCAGCCCGAGCAGGTaGCAAAGAACGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLSSPSR*QRTEQE
Trigger: CTCCTGCTCCGTTCTTTGCCACCTGCTCGGGCTGCT...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCATCCAGGGCAGCCAGGTaGGCCCGGACACTCTCATCA +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSSRAAR*ARTLSS
Trigger: TGATGAGAGTGTCCGGGCCCACCTGGCTGCCCTGGA...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGCGTGGGGAACACGCTaGTGCTGGCCTGAGTACGTG +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHAWGTR*CWPEYV
Trigger: CACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGC...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCCTGGCTCAGCACAGCTaGGGGCTTGAGGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLLAQHS*GLEAIH
Trigger: GTGGATTGCCTCAAGCCCCCAGCTGTGCTGAGCCAG...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACAGCAGGCCCAAGAGCTaGTGCTGCCAGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHSRPKS*CCQRKR
Trigger: GCGCTTCCTCTGGCAGCACCAGCTCTTGGGCCTGCT...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGCTCGGCTCAGCAGATaGCCCAAGGCCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHARLSR*PKASGP
Trigger: TGGACCTGAGGCCTTGGGCCATCTGCTGAGCCGAGC...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCAGCCTTGAGCCCAGCTaGGGATGTCTGAGACAGGCG +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLSLEPS*GCLRQA
Trigger: CGCCTGTCTCAGACATCCCCAGCTGGGCTCAAGGCT...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTTGGCGGGAGGCCAGGTaGCCTAGGATGCCTACAACT +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPWREAR*PRMPTT
Trigger: AGTTGTAGGCATCCTAGGTCACCTGGCCTCCCGCCA...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTGCACAGCTGGGGGCTTaGGGCAATCCACAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSAQLGA*GNPQAL
Trigger: GAGAGCTTGTGGATTGCCTCAAGCCCCCAGCTGTGC...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCCAGCTGGGGATGTCTaGGACAGGCGGGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPPAGDV*DRRVRS
Trigger: GCTTCTCACCCGCCTGTCTCAGACATCCCCAGCTGG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTGGCTTCCCTCAGCCATaGCAGCCACTAAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSGFPQP*QPLRCR
Trigger: CCTGCACCTTAGTGGCTGTCATGGCTGAGGGAAGCC...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCGCAGATTCCCCAAAGTaGGCCCCTAGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPADSPK*APRAAG
Trigger: CCCTGCAGCCCTAGGGGCGCACTTTGGGGAATCTGC...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAAGGGACATGAGAGGGTaGAGGTGGACGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSRDMRG*RWTEVR
Trigger: CCTCACCTCCGTCCACCTCCACCCTCTCATGTCCCT...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCACCATTAATGTACGCGTaGCCCTACAACCCATCCACA +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPPLMYA*PYNPST
Trigger: TGTGGATGGGTTGTAGGGCCACGCGTACATTAATGG...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp AGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGTGCAGCAGCAGCAGCTaGATTAGCCGGTCACAAGCC +
Preference number: 4 (lower is better)
Translates to: RRETSTLPEHVSPFPLSLCSSSS*ISRSQA
Trigger: GGCTTGTGACCGGCTAATCCAGCTGCTGCTGCTGCA...CAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCAATCCCTCCAGGACCTaGCACAGCTGCAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLNPSRT*HSCSVP
Trigger: AGGCACACTGCAGCTGTGCCAGGTCCTGGAGGGATT...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCATGGGTCGTGTCAGGGTaGCGAGAGGCTTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSWVVSG*REASQW
Trigger: CCATTGGGAAGCCTCTCGCCACCCTGACACGACCCA...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTAACGGAACCGTGGCCTaGAGGGAGGGGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSNGTVA*REGSPL
Trigger: CAGTGGGGACCCCTCCCTTCAGGCCACGGTTCCGTT...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCAAGGAGAGTGGACGGTaGAGGTGCCTGGAAACGGCC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPKESGR*RCLETA
Trigger: GGCCGTTTCCAGGCACCTTCACCGTCCACTCTCCTT...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAGAGGCAAAGAAGCGGTaGACCCCAGCCCTTACCAGT +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSEAKKR*TPALTS
Trigger: ACTGGTAAGGGCTGGGGTGCACCGCTTCTTTGCCTC...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCATTGTCCCCATCTACTTaGCCACCAAACAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPLSPST*PPNSSV
Trigger: CACAGAACTGTTTGGTGGGCAAGTAGATGGGGACAA...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTAGGACCTGGCACAGCTaGAGTGTGCCTCCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPRTWHS*SVPPVS
Trigger: ACTAACCGGAGGCACACTGCAGCTGTGCCAGGTCCT...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACAGCTCTGCACCAGCTaGATCGGGACACACACTCTC +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSQLCTS*IGTHTL
Trigger: GAGAGTGTGTGTCCCGATGCAGCTGGTGCAGAGCTG...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTAGGCGGTCGATGTTaGGGTGGAGGACACTGTGCA +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPLGGRC*GGGHCA
Trigger: TGCACAGTGTCCTCCACCGCAACATCGACCGCCTAG...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCGGGCTGAGAGTTGGTaGCCCAGAATGGGGTCTACG +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPRAESW*PRMGST
Trigger: CGTAGACCCCATTCTGGGCCACCAACTCTCAGCCCG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCGGAACACGCTGGTGCTaGCCTGAGTACGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPGTRWC*PEYVLL
Trigger: GAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCC...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp AGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCAACTGAGGCAATCTTaGGCACCCGTTTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RRETSTLPEHVSPFPLSLQLRQS*APVSPQ
Trigger: CTGCGGAGAAACGGGTGCCCAAGATTGCCTCAGTTG...CAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTGCCAGGTCAGACAGATaGGCTGAGGCAGATTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPARSDR*AEADSP
Trigger: TGGGGAATCTGCCTCAGCCCATCTGTCTGACCTGGC...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCACCGATGACTCCAGCATaGAAAACTGACCAAATCCCT +
Preference number: 4 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPPMTPA*KTDQIP
Trigger: AGGGATTTGGTCAGTTTTCCATGCTGGAGTCATCGG...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACACATTCAGTGCCCCCTaGGGCACTGCAGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHTFSAP*GTAAVN
Trigger: GTTCACTGCTGCAGTGCCCCAGGGGGCACTGAATGT...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp AGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGACCTGCTGCACTTCCTaGACCACATCCTCTAGACCA +
Preference number: 4 (lower is better)
Translates to: RRETSTLPEHVSPFPLSLTCCTS*TTSSRP
Trigger: TGGTCTAGAGGATGTGGTTCAGGAAGTGCAGCAGGT...CAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCTGTAGAGGGGGTCTaGGAAGAGCTTCCACCACTA +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLSVEGV*EELPPL
Trigger: TAGTGGTGGAAGCTCTTCTCAGACCCCCTCTACAGA...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTGCAAAGCTGGTGACATaGCTGCCAGCTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPAKLVT*LPAAVG
Trigger: TCCTACTGCAGCTGGCAGTCATGTCACCAGCTTTGC...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTCTCGGGGGAATCCTTaGAGGTGTTGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPSRGNP*RCCCSW
Trigger: CCAGCTGCAGCAACACCTTCAAGGATTCCCCCGAGA...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAGTCAGACAGATGGGCTaGGGCAGATTCCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSVRQMG*GRFPKV
Trigger: CACTTTGGGGAATCTGCCTCAGCCCATCTGTCTGAC...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp AGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGGAAGCGACCCCGCTCTaGTTGGAAGATGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: RRETSTLPEHVSPFPLSLEATPL*LEDELL
Trigger: CAGAAGTTCATCTTCCAATCAGAGCGGGGTCGCTTC...CAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAGCCTCCAGATCCCCCTaGCAGGCTATCATGGAACAT +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSASRSP*QAIMEH
Trigger: ATGTTCCATGATAGCCTGGCAGGGGGATCTGGAGGC...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAGACATGACTGCCAGCTaGAGTAGGAACGGAACCGTG +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSDMTAS*SRNGTV
Trigger: CACGGTTCCGTTCCTACTGCAGCTGGCAGTCATGTC...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGCAAACAGTTCTGTGTTaGCTCGATGTAAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLQTVLC*LDVRLL
Trigger: AAGGAGCCTTACATCGAGGCAACACAGAACTGTTTG...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCTCCACCAAGGTCACTaGCACTGCTTTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPLHQGH*HCFGCL
Trigger: GAGGCAGCCAAAGCAGTGGCAGTGACCTTGGTGGAG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTGCTTTGGCTGCCTCTaGACTCAAGATGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPCFGCL*TQDGCP
Trigger: GGGGCACCCATCTTGAGTCCAGAGGCAGCCAAAGCA...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCCACTGCTTTaGCTGCCTCTGGACTCAAGA +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLSLPLL*LPLDSR
Trigger: TCTTGAGTCCAGAGGCAGCCAAAGCAGTGGCAGTGA...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCGGTCGATGTTGCGGTaGAGGACACTGTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPRSMLR*RTLCST
Trigger: TGTGCTGCACAGTGTCCTCCACCGCAACATCGACCG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTGCTCAGTTGCCCCATaGGGTCAATGGACCATGCAC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPCSVAP*GQWTMH
Trigger: GTGCATGGTCCATTGACCTCATGGGGCAACTGAGCA...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTACGCTGGTGCTGGCCTaGGTACGTGCTGCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSTLVLA*VRAAQL
Trigger: CAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGT...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTTCTGAGACAGGCGGGTaGGAAGCTGACAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSSETGG*EADRLR
Trigger: CCTCAGCCTGTCAGCTTCTCACCCGCCTGTCTCAGA...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTTTAAGCCACGGCCGATaGCTCCAGCATGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPLSHGR*LQHGKL
Trigger: CAGTTTTCCATGCTGGAGTCATCGGCCGTGGCTTAA...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCAGTGAACCAGGAGGCTaGGGAGGCTCTGGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPSEPGG*GGSGCY
Trigger: ATAACACCCAGAGCCTCCTCAGCCTCCTGGTTCACT...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTTACGTGCTGCTCAGTTaGCCCATGAGGTCAATGGAC +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPYVLLS*PMRSMD
Trigger: GTCCATTGACCTCATGGGGCAACTGAGCAGCACGTA...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTTGGGGAACACGCTGGTaGTGGCCTGAGTACGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSWGTRW*WPEYVL
Trigger: CAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCA...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCAAGGTCACTGCCACTaGTTTGGCTGCCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPQGHCH*FGCLWT
Trigger: AGTCCAGAGGCAGCCAAAGCAGTGGCAGTGACCTTG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCGGTGGAGGACACTGTaGAGCACAGCCAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSRWRTL*STARWG
Trigger: ACCCCATCTGGCTGTGCTGCACAGTGTCCTCCACCG...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACAAGACACCTCTCAAGTaGTCAAGCACAGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHKTPLK*SSTAAR
Trigger: TCGGGCTGCTGTGCTTGACCACTTGAGAGGTGTCTT...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTATCCACACACGCATCTaGGCAGCTACCAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPIHTRI*AATNES
Trigger: GCTCTCATTGGTAGCTGCCCAGATGCGTGTGTGGAT...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCACTGCTCAACCTCCCTaGGCTTCCAGAGCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLTAQPP*ASRARK
Trigger: TTTTCTTGCTCTGGAAGCCCAGGGAGGTTGAGCAGT...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAGTCAGAAAAGCCTTaGTTTCCTGGGACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSQSEKP*FPGTAP
Trigger: AGGAGCTGTCCCAGGAAATCAAGGCTTTTCTGACTG...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACTTCCTGCTGATTTCGTaGCTGGACAAACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHFLLIS*LDKLGW
Trigger: CCACCCAAGTTTGTCCAGTCACGAAATCAGCAGGAA...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTTGGACTCAAGATGGGTaGCCCCCAGCATTCCCCACA +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSWTQDG*PPAFPT
Trigger: TGTGGGGAATGCTGGGGGGCACCCATCTTGAGTCCA...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCCTCCAGCCCCACCATaGACACAAAAGTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPPPAPP*TQKSLR
Trigger: CCTTAAGGACTTTTGTGTCCATGGTGGGGCTGGAGG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGTCGAAAGGTGCCAGTTaGCTAAATACTTCATGCATA +
Preference number: 4 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLSKGAS*LNTSCI
Trigger: TATGCATGAAGTATTTAGCCAACTGGCACCTTTCGA...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCGACGGTGAAGGTGCCTaGAAACGGCCAGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPDGEGA*KRPEKR
Trigger: TCTTTTCTCTGGCCGTTTCCAGGCACCTTCACCGTC...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACAAGTGTGGAGAATGCTaGACAGAGGTATCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHKCGEC*TEVSSK
Trigger: CTTGCTGGATACCTCTGTTCAGCATTCTCCACACTT...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTTGGAAGATGAACTTCTaGGGCAAGGGCCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSWKMNF*GKGPCS
Trigger: GGAGCATGGGCCCTTGCCTCAGAAGTTCATCTTCCA...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTTGGAGAAGTCCCGAATaGAGCGACCCCGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSWRSPE*SDPALI
Trigger: AATCAGAGCGGGGTCGCTTCATTCGGGACTTCTCCA...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAAGAGGAGCCAATATGTaGCACAACCCAGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSRGANM*HNPVKV
Trigger: CACTTTGACTGGGTTGTGGCACATATTGGCTCCTCT...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCCTGCATATAACTGGGTaGCCAAACTCAACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLLHITG*PNSTLQ
Trigger: CTGAAGAGTTGAGTTTGGCCACCCAGTTATATGCAG...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAAGCCCTGCATATAACTaGGTGGCCAAACTCAACTCT +
Preference number: 4 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSSPAYN*VAKLNS
Trigger: AGAGTTGAGTTTGGCCACCCAGTTATATGCAGGGCT...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp CAGCGCTCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACTGGCTAAATACTTCATaGATATTACCCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: QRSLDQGLRRETSTLPEHWLNTS*ILPRAG
Trigger: TCCGGCCCTGGGTAATATGCATGAAGTATTTAGCCA...GTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGAGCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCACGCACCTCGAAAGGTaGCAGTTGGCTAAATACTTC +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPTHLER*QLAKYF
Trigger: GAAGTATTTAGCCAACTGGCACCTTTCGAGGTGCGT...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTGTGACTGGACAAACTTaGGTGGCTTTAAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSVTGQT*VALSHG
Trigger: GCCGTGGCTTAAAGCCACCCAAGTTTGTCCAGTCAC...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR TCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCTCCAACATGGTTTTTaGGCGCATCTAAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPLQHGF*AHLKRA
Trigger: TGCCCTTTTTAGATGCGCTCAAAAACCATGTTGGAG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTGAGGTCAATGGACCATaGACTAATCACAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSEVNGP*TNHRCP
Trigger: TGGGCACCTGTGATTAGTGCATGGTCCATTGACCTC...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR GCA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCAGGTGACCTAGGATaGCTACAACTGAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSPGDLG*LQLRQS
Trigger: AGATTGCCTCAGTTGTAGGCATCCTAGGTCACCTGG...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CCA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCCACAGCTCTCCAACATaGTTTTTGAGCGCATCTAAA +
Preference number: 4 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPHSSPT*FLSASK
Trigger: TTTAGATGCGCTCAAAAACCATGTTGGAGAGCTGTG...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp GTGCAGGATGCCTCCAGGTGCCAGGGGGAGTGGGTCGTGTCAGGGTaGCGAGAGGCTTCCCAATGGCCCAAGAGGGCGGCCAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: VQDASRCQGEWVVSG*REASQWPKRAASSP
Trigger: GGGGCTGCTGGCCGCCCTCTTGGGCCATTGGGAAGCCTCTCGCCACCCTGACACGACCCACTCCCCCTGGCACCTGGAGGCATCCTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp TTAACAGCTCAAAGAGCAGGGGCTGTTCGCGGAAGCGCCGGCCAATaGGGAGATCCCGCTCCACGGTGGCCCGGGCGTGTTCCTCGGGGG +
Preference number: 5 (lower is better)
Translates to: LTAQRAGAVRGSAGQ*GDPAPRWPGRVPRG
Trigger: CCCCCGAGGAACACGCCCGGGCCACCGTGGAGCGGGATCTCCGCATTGGCCGGCGCTTCCGCGAACAGCCCCTGCTCTTTGAGCTGTTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp AGAGGAGCCAGGTCAGACAGATGGGCTGAGGCAGATTCCCCAAAGTaGGCCCCTAGGGCTGCAGGGCCCTCGCCACCCTGCTGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: RGARSDRWAEADSPK*APRAAGPSPPCCSH
Trigger: GTGGGAACAGCAGGGTGGCGAGGGCCCTGCAGCCCTAGGGGCGCACTTTGGGGAATCTGCCTCAGCCCATCTGTCTGACCTGGCTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp TTGCGCAGGAACCGGGCCGTGAAGGGAGGCTGTAATGTCCCTGCATaGACCCGAGCCAGACAGCTTCGGAAAGCCAGGGGCAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LRRNRAVKGGCNVPA*TRARQLRKARGRRP
Trigger: TGGCCTCCTGCCCCTGGCTTTCCGAAGCTGTCTGGCTCGGGTGCATGCAGGGACATTACAGCCTCCCTTCACGGCCCGGTTCCTGCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp ATGACAGCCACTAAGGTGCAGGATGCCTCCAGGTGCCAGGGGGAGTaGGTCGTGTCAGGGTGGCGAGAGGCTTCCCAATGGCCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: MTATKVQDASRCQGE*VVSGWREASQWPKR
Trigger: CCTCTTGGGCCATTGGGAAGCCTCTCGCCACCCTGACACGACCCACTCCCCCTGGCACCTGGAGGCATCCTGCACCTTAGTGGCTGTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp CGCAGGAGCTCCCGTCGGATGCTATCTCCGTGGCGGGAGGCCAGGTaGCCTAGGATGCCTACAACTGAGGCAATCTTGGGCACCCGTTTC +
Preference number: 5 (lower is better)
Translates to: RRSSRRMLSPWREAR*PRMPTTEAILGTRF
Trigger: GAAACGGGTGCCCAAGATTGCCTCAGTTGTAGGCATCCTAGGTCACCTGGCCTCCCGCCACGGAGATAGCATCCGACGGGAGCTCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp GTTCCCACCCTACTAGCAGTGCCAAGTTGCGCAGGAACCGGGCCGTaGAGGGAGGCTGTAATGTCCCTGCATGCACCCGAGCCAGACAGC +
Preference number: 5 (lower is better)
Translates to: VPTLLAVPSCAGTGP*REAVMSLHAPEPDS
Trigger: GCTGTCTGGCTCGGGTGCATGCAGGGACATTACAGCCTCCCTTCACGGCCCGGTTCCTGCGCAACTTGGCACTGCTAGTAGGGTGGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp CCCAGCTGGGGATGTCTGAGACAGGCGGGTGAGAAGCTGACAGGCTaGGGCCACACCTGGGGGTCCATGCAGCCTCAGAGAGGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: PSWGCLRQAGEKLTG*GHTWGSMQPQRGKE
Trigger: TTCTTTGCCTCTCTGAGGCTGCATGGACCCCCAGGTGTGGCCTCAGCCTGTCAGCTTCTCACCCGCCTGTCTCAGACATCCCCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp CATGCATATTACCCAGGGCCGGAGGCAGGAGGCTTCCCTCAGCCATaGCAGCCACTAAGGTGCAGGATGCCTCCAGGTGCCAGGGGGAGT +
Preference number: 5 (lower is better)
Translates to: HAYYPGPEAGGFPQP*QPLRCRMPPGARGS
Trigger: ACTCCCCCTGGCACCTGGAGGCATCCTGCACCTTAGTGGCTGTCATGGCTGAGGGAAGCCTCCTGCCTCCGGCCCTGGGTAATATGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp CCAGAGAAAAGACCTAGGCGGTCGATGTTGCGGTGGAGGACACTGTaGAGCACAGCCAGATGGGGTCCACCCTCACCTCCACCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PEKRPRRSMLRWRTL*STARWGPPSPPPSL
Trigger: CAGGGAGGGTGGAGGTGAGGGTGGACCCCATCTGGCTGTGCTGCACAGTGTCCTCCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp CCCGTCGGATGCTATCTCCGTGGCGGGAGGCCAGGTGACCTAGGATaGCTACAACTGAGGCAATCTTGGGCACCCGTTTCTCCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PVGCYLRGGRPGDLG*LQLRQSWAPVSPQE
Trigger: TTCCTGCGGAGAAACGGGTGCCCAAGATTGCCTCAGTTGTAGGCATCCTAGGTCACCTGGCCTCCCGCCACGGAGATAGCATCCGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp CCCCTGCCAGGCTATCATGGAACATTCGCAGGAGCTCCCGTCGGATaGTATCTCCGTGGCGGGAGGCCAGGTGACCTAGGATGCCTACAA +
Preference number: 5 (lower is better)
Translates to: PLPGYHGTFAGAPVG*YLRGGRPGDLGCLQ
Trigger: TTGTAGGCATCCTAGGTCACCTGGCCTCCCGCCACGGAGATAGCATCCGACGGGAGCTCCTGCGAATGTTCCATGATAGCCTGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp GCAGCCAGGTGGGCCCGGACACTCTCATCAAAGACACCTCTCAAGTaGTCAAGCACAGCAGCCCGAGCAGGTGGCAAAGAACGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: AARWARTLSSKTPLK*SSTAARAGGKERSR
Trigger: CCTGCTCCGTTCTTTGCCACCTGCTCGGGCTGCTGTGCTTGACCACTTGAGAGGTGTCTTTGATGAGAGTGTCCGGGCCCACCTGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp GGCGGGAGGCCAGGTGACCTAGGATGCCTACAACTGAGGCAATCTTaGGCACCCGTTTCTCCGCAGGAATGGCAGGAGATCCAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GGRPGDLGCLQLRQS*APVSPQEWQEIQGR
Trigger: CCTTCCCTGGATCTCCTGCCATTCCTGCGGAGAAACGGGTGCCCAAGATTGCCTCAGTTGTAGGCATCCTAGGTCACCTGGCCTCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp AGGGGCAGGAGGCCAGAGAGGCTGACCACTAGCCCTGCATATAACTaGGTGGCCAAACTCAACTCTTCAGGGCTTCGGGCTCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RGRRPERLTTSPAYN*VAKLNSSGLRARLS
Trigger: GCTGAGCCGAGCCCGAAGCCCTGAAGAGTTGAGTTTGGCCACCCAGTTATATGCAGGGCTAGTGGTCAGCCTCTCTGGCCTCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp GCCTGGAAACGGCCAGAGAAAAGACCTAGGCGGTCGATGTTGCGGTaGAGGACACTGTGCAGCACAGCCAGATGGGGTCCACCCTCACCT +
Preference number: 5 (lower is better)
Translates to: AWKRPEKRPRRSMLR*RTLCSTARWGPPSP
Trigger: AGGTGAGGGTGGACCCCATCTGGCTGTGCTGCACAGTGTCCTCCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGGCCGTTTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp GCGTGGGGAACACGCTGGTGCTGGCCTGAGTACGTGCTGCTCAGTTaGCCCATGAGGTCAATGGACCATGCACTAATCACAGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: AWGTRWCWPEYVLLS*PMRSMDHALITGAQ
Trigger: CTGGGCACCTGTGATTAGTGCATGGTCCATTGACCTCATGGGGCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp AAGGTGCCTGGAAACGGCCAGAGAAAAGACCTAGGCGGTCGATGTTaGGGTGGAGGACACTGTGCAGCACAGCCAGATGGGGTCCACCCT +
Preference number: 5 (lower is better)
Translates to: KVPGNGQRKDLGGRC*GGGHCAAQPDGVHP
Trigger: AGGGTGGACCCCATCTGGCTGTGCTGCACAGTGTCCTCCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGGCCGTTTCCAGGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCAGTCACTGCCACTGCTTaGGCTGCCTCTGGACTCAAG +
Preference number: 5 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPVTATA*AASGLK
Trigger: CTTGAGTCCAGAGGCAGCCAAAGCAGTGGCAGTGAC...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp ACAGCCAGGTTCAACATGTTGTCCAGCTCCTCTCGGGGGAATCCTTaGAGGTGTTGCTGCAGCTGGCTCAGCACAGCTGGGGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: TARFNMLSSSSRGNP*RCCCSWLSTAGGLR
Trigger: CCTCAAGCCCCCAGCTGTGCTGAGCCAGCTGCAGCAACACCTTCAAGGATTCCCCCGAGAGGAGCTGGACAACATGTTGAACCTGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp AAAGGCTACGTCCCCTGTCGAAGGAGAGTGGACGGTGAAGGTGCCTaGAAACGGCCAGAGAAAAGACCTAGGCGGTCGATGTTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: KGYVPCRRRVDGEGA*KRPEKRPRRSMLRW
Trigger: CCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGGCCGTTTCCAGGCACCTTCACCGTCCACTCTCCTTCGACAGGGGACGTAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp CCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGAATCCTTGAAGGTGTaGCTGCAGCTGGCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: PPFRSTLVPSLSHCSTSLESLKV*LQLAQH
Trigger: GTGCTGAGCCAGCTGCAGCAACACCTTCAAGGATTC...CAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCACTAGCAGTGCCAAGTaGCGCAGGAACCGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLTSSAK*RRNRAV
Trigger: CACGGCCCGGTTCCTGCGCAACTTGGCACTGCTAGT...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp GGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCCCTAGGCGGTCGATGTaGCGGTGGAGGACACTGTGC +
Preference number: 5 (lower is better)
Translates to: GLRRETSTLPEHVSPFPLPRRSM*RWRTLC
Trigger: GCACAGTGTCCTCCACCGCAACATCGACCGCCTAGG...GAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp CAAAGAACGGAGCAGGAGAAGACCACAGCGAGCATGTTCCCGGGCTaGGAGTTGGTGGCCCAGAATGGGGTCTACGCCAGTCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: QRTEQEKTTASMFPG*ELVAQNGVYASQKS
Trigger: GCTTTTCTGACTGGCGTAGACCCCATTCTGGGCCACCAACTCTCAGCCCGGGAACATGCTCGCTGTGGTCTTCTCCTGCTCCGTTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp TTCATTAAGAGCGCCAGTAGCGTGGGGAACACGCTGGTGCTGGCCTaGGTACGTGCTGCTCAGTTGCCCCATGAGGTCAATGGACCATGC +
Preference number: 5 (lower is better)
Translates to: FIKSASSVGNTLVLA*VRAAQLPHEVNGPC
Trigger: GCATGGTCCATTGACCTCATGGGGCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCTTAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp AATCCACAAGCTCTCCAGAGACAGTGCCCAGCAAAGCTGGTGACATaGCTGCCAGCTGCAGTAGGAACGGAACCGTGGCCTGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: NPQALQRQCPAKLVT*LPAAVGTEPWPEGR
Trigger: CCTCCCTTCAGGCCACGGTTCCGTTCCTACTGCAGCTGGCAGTCATGTCACCAGCTTTGCTGGGCACTGTCTCTGGAGAGCTTGTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp AAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTaGTCAACCTCCCTGGGCTTCCAGAGCAAGAAAAGGCTACGTCCC +
Preference number: 5 (lower is better)
Translates to: KPPPFRSTLVPSLSH*STSLGFQSKKRLRP
Trigger: GGGACGTAGCCTTTTCTTGCTCTGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp CGGAGCAGGAGAAGACCACAGCGAGCATGTTCCCGGGCTGAGAGTTaGTGGCCCAGAATGGGGTCTACGCCAGTCAGAAAAGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: RSRRRPQRACSRAES*WPRMGSTPVRKALI
Trigger: AATCAAGGCTTTTCTGACTGGCGTAGACCCCATTCTGGGCCACCAACTCTCAGCCCGGGAACATGCTCGCTGTGGTCTTCTCCTGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp AGCAGTTCATTAAGAGCGCCAGTAGCGTGGGGAACACGCTGGTGCTaGCCTGAGTACGTGCTGCTCAGTTGCCCCATGAGGTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: SSSLRAPVAWGTRWC*PEYVLLSCPMRSMD
Trigger: GTCCATTGACCTCATGGGGCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCTTAATGAACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp AGCTGTAGCAGTTCATTAAGAGCGCCAGTAGCGTGGGGAACACGCTaGTGCTGGCCTGAGTACGTGCTGCTCAGTTGCCCCATGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SCSSSLRAPVAWGTR*CWPEYVLLSCPMRS
Trigger: TGACCTCATGGGGCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCTTAATGAACTGCTACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp CAACCCATCCACAGCTGTAGCAGTTCATTAAGAGCGCCAGTAGCGTaGGGAACACGCTGGTGCTGGCCTGAGTACGTGCTGCTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: QPIHSCSSSLRAPVA*GTRWCWPEYVLLSC
Trigger: GCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCTTAATGAACTGCTACAGCTGTGGATGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp CCCCAGACACTGAGCAGCAGCAGACGCACCTCGAAAGGTGCCAGTTaGCTAAATACTTCATGCATATTACCCAGGGCCGGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PQTLSSSRRTSKGAS*LNTSCILPRAGGRR
Trigger: CCTCCTGCCTCCGGCCCTGGGTAATATGCATGAAGTATTTAGCCAACTGGCACCTTTCGAGGTGCGTCTGCTGCTGCTCAGTGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp GCTCAGTTGCCCCATGAGGTCAATGGACCATGCACTAATCACAGGTaGCCAGGCCTTTGGGTTGGCCCGGATAAACTCAGACAGCACCTG +
Preference number: 5 (lower is better)
Translates to: AQLPHEVNGPCTNHR*PGLWVGPDKLRQHL
Trigger: CAGGTGCTGTCTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCTGTGATTAGTGCATGGTCCATTGACCTCATGGGGCAACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp AGCAGCAGACGCACCTCGAAAGGTGCCAGTTGGCTAAATACTTCATaGATATTACCCAGGGCCGGAGGCAGGAGGCTTCCCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SSRRTSKGASWLNTS*ILPRAGGRRLPSAM
Trigger: CATGGCTGAGGGAAGCCTCCTGCCTCCGGCCCTGGGTAATATGCATGAAGTATTTAGCCAACTGGCACCTTTCGAGGTGCGTCTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp AGCAGGAGAAGACCACAGCGAGCATGTTCCCGGGCTGAGAGTTGGTaGCCCAGAATGGGGTCTACGCCAGTCAGAAAAGCCTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: SRRRPQRACSRAESW*PRMGSTPVRKALIS
Trigger: GGAAATCAAGGCTTTTCTGACTGGCGTAGACCCCATTCTGGGCCACCAACTCTCAGCCCGGGAACATGCTCGCTGTGGTCTTCTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp CAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTGCCCAGGCCTTTGGGTaGGCCCGGATAAACTCAGAC +
Preference number: 5 (lower is better)
Translates to: QGLRRETSTLPEHVSPFPAQAFG*ARINSD
Trigger: GTCTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGC...AGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAGCCAGGTTCAACATGTaGTCCAGCTCCTCTCGGGGG +
Preference number: 5 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSARFNM*SSSSRG
Trigger: CCCCCGAGAGGAGCTGGACAACATGTTGAACCTGGC...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp TGGAAAACTGACCAAATCCCTCCAGGACCTGGCACAGCTGCAGTGTaGCTCCGGTTAGTGTCCAACAGGGAGGCAGAAGCCAAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: WKTDQIPPGPGTAAV*LRLVSNREAEAKEA
Trigger: AGCTTCTTTGGCTTCTGCCTCCCTGTTGGACACTAACCGGAGGCACACTGCAGCTGTGCCAGGTCCTGGAGGGATTTGGTCAGTTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp CATGAGGTCAATGGACCATGCACTAATCACAGGTGCCCAGGCCTTTaGGTTGGCCCGGATAAACTCAGACAGCACCTGCTGCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: HEVNGPCTNHRCPGL*VGPDKLRQHLLHFL
Trigger: CAGGAAGTGCAGCAGGTGCTGTCTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCTGTGATTAGTGCATGGTCCATTGACCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp TGGACAAACTTGGGTGGCTTTAAGCCACGGCCGATGACTCCAGCATaGAAAACTGACCAAATCCCTCCAGGACCTGGCACAGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: WTNLGGFKPRPMTPA*KTDQIPPGPGTAAV
Trigger: CACTGCAGCTGTGCCAGGTCCTGGAGGGATTTGGTCAGTTTTCCATGCTGGAGTCATCGGCCGTGGCTTAAAGCCACCCAAGTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp CTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCAAGCACAGCTGGGGGCTaGAGGCAATCCACAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LRRETSTLPEHVSPFPLSSTAGG*RQSTSS
Trigger: AGAGCTTGTGGATTGCCTCAAGCCCCCAGCTGTGCT...TGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCTCTCGGGGGAATCCTaGAAGGTGTTGCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSLSGES*KVLLQL
Trigger: CAGCTGCAGCAACACCTTCAAGGATTCCCCCGAGAG...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp CCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCAACCTCCCTGGGCTTCCAATTGTCCCCATCTACTaGCCCACCAAACAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: PEHVSPFPLSLLNLPGLPIVPIY*PTKQFC
Trigger: ACAGAACTGTTTGGTGGGCAAGTAGATGGGGACAAT...TGGAAGCCCAGGGAGGTTGAGCAGTGAGAGAGGGAAGGGACTAACGTGCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp GAGAAAACCCCAGACACTGAGCAGCAGCAGACGCACCTCGAAAGGTaGCAGTTGGCTAAATACTTCATGCATATTACCCAGGGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: EKTPDTEQQQTHLER*QLAKYFMHITQGRR
Trigger: CCTCCGGCCCTGGGTAATATGCATGAAGTATTTAGCCAACTGGCACCTTTCGAGGTGCGTCTGCTGCTGCTCAGTGTCTGGGGTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTGTACGTGCTGCTCAGTaGCCCCATGAGGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSVRAAQ*PHEVNG
Trigger: TCCATTGACCTCATGGGGCAACTGAGCAGCACGTAC...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp GACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTACAACTGAGGCAATCTaGGGCACCCGTTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: DLEEKPPPFRSTLVPSLSTTEAI*GTRFSA
Trigger: TGCGGAGAAACGGGTGCCCAAGATTGCCTCAGTTGT...AGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp AGGTATCCAGCAAGGCATCCACACACGCATCTGGGCAGCTACCAATaGGAGCCGAGAGGCACTGCACATAGATGTCCATTAATGTACGCG +
Preference number: 5 (lower is better)
Translates to: RYPARHPHTHLGSYQ*EPRGTAHRCPLMYA
Trigger: CGCGTACATTAATGGACATCTATGTGCAGTGCCTCTCGGCTCTCATTGGTAGCTGCCCAGATGCGTGTGTGGATGCCTTGCTGGATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp GAGGAGCCAATATGTGCCACAACCCAGTCAAAGTGTGGAGAATGCTaGACAGAGGTATCCAGCAAGGCATCCACACACGCATCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: EEPICATTQSKCGEC*TEVSSKASTHASGQ
Trigger: CTGCCCAGATGCGTGTGTGGATGCCTTGCTGGATACCTCTGTTCAGCATTCTCCACACTTTGACTGGGTTGTGGCACATATTGGCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 90 bp GATTTCGTGACTGGACAAACTTGGGTGGCTTTAAGCCACGGCCGATaGCTCCAGCATGGAAAACTGACCAAATCCCTCCAGGACCTGGCA +
Preference number: 5 (lower is better)
Translates to: DFVTGQTWVALSHGR*LQHGKLTKSLQDLA
Trigger: TGCCAGGTCCTGGAGGGATTTGGTCAGTTTTCCATGCTGGAGTCATCGGCCGTGGCTTAAAGCCACCCAAGTTTGTCCAGTCACGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp GAGTCTCATTGTCCCCATCTACTTGCCCACCAAACAGTTCTGTGTTaGCTCGATGTAAGGCTCCTTCAACCAGCAGCTGCAGGACAGCCT +
Preference number: 5 (lower is better)
Translates to: ESHCPHLLAHQTVLC*LDVRLLQPAAAGQP
Trigger: AGGCTGTCCTGCAGCTGCTGGTTGAAGGAGCCTTACATCGAGGCAACACAGAACTGTTTGGTGGGCAAGTAGATGGGGACAATGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 90 bp AGAATGCTGAACAGAGGTATCCAGCAAGGCATCCACACACGCATCTaGGCAGCTACCAATGAGAGCCGAGAGGCACTGCACATAGATGTC +
Preference number: 5 (lower is better)
Translates to: RMLNRGIQQGIHTRI*AATNESREALHIDV
Trigger: GACATCTATGTGCAGTGCCTCTCGGCTCTCATTGGTAGCTGCCCAGATGCGTGTGTGGATGCCTTGCTGGATACCTCTGTTCAGCATTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp AGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGACTGAGAGAGTCTCATaGTCCCCATCTACTTGCCCA +
Preference number: 5 (lower is better)
Translates to: RRETSTLPEHVSPFPLSLTERVS*SPSTCP
Trigger: TGGGCAAGTAGATGGGGACAATGAGACTCTCTCAGT...CAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp TTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCGTGATGAACCAGTTTTaGCAGGTGCAGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LDQGLRRETSTLPEHVSPVMNQF*QVQQQQ
Trigger: CTGCTGCTGCTGCACCTGCAAAAACTGGTTCATCAC...GGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp AGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCCTTCCCTCTCTCACTGCTCGAAAGGTGCCAGTaGGCTAAATACTTCATGCAT +
Preference number: 5 (lower is better)
Translates to: RRETSTLPEHVSPFPLSLLERCQ*AKYFMH
Trigger: ATGCATGAAGTATTTAGCCAACTGGCACCTTTCGAG...CAGTGAGAGAGGGAAGGGACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 90 bp GAGAACCCGGGAAATGATGGTGCCAGGAAAAGAGGAGCCAATATGTaGCACAACCCAGTCAAAGTGTGGAGAATGCTGAACAGAGGTATC +
Preference number: 5 (lower is better)
Translates to: ENPGNDGARKRGANM*HNPVKVWRMLNRGI
Trigger: GATACCTCTGTTCAGCATTCTCCACACTTTGACTGGGTTGTGGCACATATTGGCTCCTCTTTTCCTGGCACCATCATTTCCCGGGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS-3UTR CAA 90 bp TCTTTAGACCAAGGACTTAGAAGAGAAACCTCCACCCTTCCGGAGCACGTTAGTCCAAACAGTTCTGTGTaGCCTCGATGTAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SLDQGLRRETSTLPEHVSPNSSV*PRCKAP
Trigger: AGGAGCCTTACATCGAGGCAACACAGAACTGTTTGG...ACTAACGTGCTCCGGAAGGGTGGAGGTTTCTCTTCTAAGTCCTTGGTCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp GCCTCCAGGTGCCAGGGGGAGTGGGTCGTGTCAGGGTaGCGAGAGGCTTCCCAATGGCCCAAGAGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: ASRCQGEWVVSG*REASQWPKRAA
Trigger: GGCCGCCCTCTTGGGCCATTGGGAAGCCTCTCGCCACCCTGACACGACCCACTCCCCCTGGCACCTGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp CAAAGAGCAGGGGCTGTTCGCGGAAGCGCCGGCCAATaGGGAGATCCCGCTCCACGGTGGCCCGGGCGTGTT +
Preference number: 6 (lower is better)
Translates to: QRAGAVRGSAGQ*GDPAPRWPGRV
Trigger: AACACGCCCGGGCCACCGTGGAGCGGGATCTCCGCATTGGCCGGCGCTTCCGCGAACAGCCCCTGCTCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp GAGTGGGTCGTGTCAGGGTGGCGAGAGGCTTCCCAATaGCCCAAGAGGGCGGCCAGCAGCCCCCGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: EWVVSGWREASQ*PKRAASSPRSS
Trigger: GCTGCTTCGGGGGCTGCTGGCCGCCCTCTTGGGCCATTGGGAAGCCTCTCGCCACCCTGACACGACCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp AGGTCAGACAGATGGGCTGAGGCAGATTCCCCAAAGTaGGCCCCTAGGGCTGCAGGGCCCTCGCCACCCTGC +
Preference number: 6 (lower is better)
Translates to: RSDRWAEADSPK*APRAAGPSPPC
Trigger: GCAGGGTGGCGAGGGCCCTGCAGCCCTAGGGGCGCACTTTGGGGAATCTGCCTCAGCCCATCTGTCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp ATGACTGCCAGCTGCAGTAGGAACGGAACCGTGGCCTaGAGGGAGGGGTCCCCACTGCGGCCTCCAGATCCC +
Preference number: 6 (lower is better)
Translates to: MTASCSRNGTVA*REGSPLRPPDP
Trigger: GGGATCTGGAGGCCGCAGTGGGGACCCCTCCCTTCAGGCCACGGTTCCGTTCCTACTGCAGCTGGCAGTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp TACCCAGGGCCGGAGGCAGGAGGCTTCCCTCAGCCATaGCAGCCACTAAGGTGCAGGATGCCTCCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: YPGPEAGGFPQP*QPLRCRMPPGA
Trigger: GGCACCTGGAGGCATCCTGCACCTTAGTGGCTGTCATGGCTGAGGGAAGCCTCCTGCCTCCGGCCCTGGGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp GGGGGTCCATGCAGCCTCAGAGAGGCAAAGAAGCGGTaGACCCCAGCCCTTACCAGTCCCAGGAGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: GGPCSLREAKKR*TPALTSPRSWE
Trigger: CTCCCAGCTCCTGGGACTGGTAAGGGCTGGGGTGCACCGCTTCTTTGCCTCTCTGAGGCTGCATGGACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp AACCGGGCCGTGAAGGGAGGCTGTAATGTCCCTGCATaGACCCGAGCCAGACAGCTTCGGAAAGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: NRAVKGGCNVPA*TRARQLRKARG
Trigger: GCCCCTGGCTTTCCGAAGCTGTCTGGCTCGGGTGCATGCAGGGACATTACAGCCTCCCTTCACGGCCCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp CTCAACTCTTCAGGGCTTCGGGCTCGGCTCAGCAGATaGCCCAAGGCCTCAGGTCCACAGCTAGGCCGGGTA +
Preference number: 6 (lower is better)
Translates to: LNSSGLRARLSR*PKASGPQLGRV
Trigger: TACCCGGCCTAGCTGTGGACCTGAGGCCTTGGGCCATCTGCTGAGCCGAGCCCGAAGCCCTGAAGAGTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp ACTAAGGTGCAGGATGCCTCCAGGTGCCAGGGGGAGTaGGTCGTGTCAGGGTGGCGAGAGGCTTCCCAATGG +
Preference number: 6 (lower is better)
Translates to: TKVQDASRCQGE*VVSGWREASQW
Trigger: CCATTGGGAAGCCTCTCGCCACCCTGACACGACCCACTCCCCCTGGCACCTGGAGGCATCCTGCACCTTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp GGATGTCTGAGACAGGCGGGTGAGAAGCTGACAGGCTaGGGCCACACCTGGGGGTCCATGCAGCCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: GCLRQAGEKLTG*GHTWGSMQPQR
Trigger: TCTCTGAGGCTGCATGGACCCCCAGGTGTGGCCTCAGCCTGTCAGCTTCTCACCCGCCTGTCTCAGACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 90 bp GAAGGTGCCTGGAAACGGCCAGAGAAAAGACCTAGGCGGTCGATGTaGCGGTGGAGGACACTGTGCAGCACAGCCAGATGGGGTCCACCC +
Preference number: 6 (lower is better)
Translates to: EGAWKRPEKRPRRSM*RWRTLCSTARWGPP
Trigger: GGGTGGACCCCATCTGGCTGTGCTGCACAGTGTCCTCCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGGCCGTTTCCAGGCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp GAGCAGGAGAAGACCACAGCGAGCATGTTCCCGGGCTaGGAGTTGGTGGCCCAGAATGGGGTCTACGCCAGT +
Preference number: 6 (lower is better)
Translates to: EQEKTTASMFPG*ELVAQNGVYAS
Trigger: ACTGGCGTAGACCCCATTCTGGGCCACCAACTCTCAGCCCGGGAACATGCTCGCTGTGGTCTTCTCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp AGCGCCAGTAGCGTGGGGAACACGCTGGTGCTGGCCTaGGTACGTGCTGCTCAGTTGCCCCATGAGGTCAAT +
Preference number: 6 (lower is better)
Translates to: SASSVGNTLVLA*VRAAQLPHEVN
Trigger: ATTGACCTCATGGGGCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp CTACTAGCAGTGCCAAGTTGCGCAGGAACCGGGCCGTaGAGGGAGGCTGTAATGTCCCTGCATGCACCCGAG +
Preference number: 6 (lower is better)
Translates to: LLAVPSCAGTGP*REAVMSLHAPE
Trigger: CTCGGGTGCATGCAGGGACATTACAGCCTCCCTTCACGGCCCGGTTCCTGCGCAACTTGGCACTGCTAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp GGCTATCATGGAACATTCGCAGGAGCTCCCGTCGGATaGTATCTCCGTGGCGGGAGGCCAGGTGACCTAGGA +
Preference number: 6 (lower is better)
Translates to: GYHGTFAGAPVG*YLRGGRPGDLG
Trigger: TCCTAGGTCACCTGGCCTCCCGCCACGGAGATAGCATCCGACGGGAGCTCCTGCGAATGTTCCATGATAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp TTAAGAGCGCCAGTAGCGTGGGGAACACGCTGGTGCTaGCCTGAGTACGTGCTGCTCAGTTGCCCCATGAGG +
Preference number: 6 (lower is better)
Translates to: LRAPVAWGTRWC*PEYVLLSCPMR
Trigger: CCTCATGGGGCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp CCACTGCGGCCTCCAGATCCCCCTGCCAGGCTATCATaGAACATTCGCAGGAGCTCCCGTCGGATGCTATCT +
Preference number: 6 (lower is better)
Translates to: PLRPPDPPARLS*NIRRSSRRMLS
Trigger: AGATAGCATCCGACGGGAGCTCCTGCGAATGTTCCATGATAGCCTGGCAGGGGGATCTGGAGGCCGCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp CGGCCAGAGAAAAGACCTAGGCGGTCGATGTTGCGGTaGAGGACACTGTGCAGCACAGCCAGATGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: RPEKRPRRSMLR*RTLCSTARWGP
Trigger: TGGACCCCATCTGGCTGTGCTGCACAGTGTCCTCCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp GCAGGAGATCCAGGGAAGGGGTCTGTAGAGGGGGTCTaGGAAGAGCTTCCACCACTACTGCCAGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: AGDPGKGSVEGV*EELPPLLPAPP
Trigger: AGGTGGAGCTGGCAGTAGTGGTGGAAGCTCTTCTCAGACCCCCTCTACAGACCCCTTCCCTGGATCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp ATCGGGACACACACTCTCCACCAAGGTCACTGCCACTaGTTTGGCTGCCTCTGGACTCAAGATGGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: IGTHTLHQGHCH*FGCLWTQDGCP
Trigger: GGGGCACCCATCTTGAGTCCAGAGGCAGCCAAAGCAGTGGCAGTGACCTTGGTGGAGAGTGTGTGTCCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp GGAAACGGCCAGAGAAAAGACCTAGGCGGTCGATGTTaGGGTGGAGGACACTGTGCAGCACAGCCAGATGGG +
Preference number: 6 (lower is better)
Translates to: GNGQRKDLGGRC*GGGHCAAQPDG
Trigger: CCCATCTGGCTGTGCTGCACAGTGTCCTCCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGGCCGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp AGACCACAGCGAGCATGTTCCCGGGCTGAGAGTTGGTaGCCCAGAATGGGGTCTACGCCAGTCAGAAAAGCC +
Preference number: 6 (lower is better)
Translates to: RPQRACSRAESW*PRMGSTPVRKA
Trigger: GGCTTTTCTGACTGGCGTAGACCCCATTCTGGGCCACCAACTCTCAGCCCGGGAACATGCTCGCTGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp AGTTCATTAAGAGCGCCAGTAGCGTGGGGAACACGCTaGTGCTGGCCTGAGTACGTGCTGCTCAGTTGCCCC +
Preference number: 6 (lower is better)
Translates to: SSLRAPVAWGTR*CWPEYVLLSCP
Trigger: GGGGCAACTGAGCAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCTTAATGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 90 bp CACAGCCAGGTTCAACATGTTGTCCAGCTCCTCTCGGGGGAATCCTaGAAGGTGTTGCTGCAGCTGGCTCAGCACAGCTGGGGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: HSQVQHVVQLLSGES*KVLLQLAQHSWGLE
Trigger: CTCAAGCCCCCAGCTGTGCTGAGCCAGCTGCAGCAACACCTTCAAGGATTCCCCCGAGAGGAGCTGGACAACATGTTGAACCTGGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 90 bp GTTCAACATGTTGTCCAGCTCCTCTCGGGGGAATCCTTGAAGGTGTaGCTGCAGCTGGCTCAGCACAGCTGGGGGCTTGAGGCAATCCAC +
Preference number: 6 (lower is better)
Translates to: VQHVVQLLSGESLKV*LQLAQHSWGLEAIH
Trigger: GTGGATTGCCTCAAGCCCCCAGCTGTGCTGAGCCAGCTGCAGCAACACCTTCAAGGATTCCCCCGAGAGGAGCTGGACAACATGTTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp GCCCGGATAAACTCAGACAGCACCTGCTGCACTTCCTaGACCACATCCTCTAGACCAGGTCCACCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: ARINSDSTCCTS*TTSSRPGPPAG
Trigger: CCCTGCTGGTGGACCTGGTCTAGAGGATGTGGTTCAGGAAGTGCAGCAGGTGCTGTCTGAGTTTATCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp CGTGCTGCTCAGTTGCCCCATGAGGTCAATGGACCATaGACTAATCACAGGTGCCCAGGCCTTTGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: RAAQLPHEVNGP*TNHRCPGLWVG
Trigger: GCCAACCCAAAGGCCTGGGCACCTGTGATTAGTGCATGGTCCATTGACCTCATGGGGCAACTGAGCAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp TGCTATCTCCGTGGCGGGAGGCCAGGTGACCTAGGATaGCTACAACTGAGGCAATCTTGGGCACCCGTTTCT +
Preference number: 6 (lower is better)
Translates to: CYLRGGRPGDLG*LQLRQSWAPVS
Trigger: AGAAACGGGTGCCCAAGATTGCCTCAGTTGTAGGCATCCTAGGTCACCTGGCCTCCCGCCACGGAGATAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp CACAGCTGTAGCAGTTCATTAAGAGCGCCAGTAGCGTaGGGAACACGCTGGTGCTGGCCTGAGTACGTGCTG +
Preference number: 6 (lower is better)
Translates to: HSCSSSLRAPVA*GTRWCWPEYVL
Trigger: CAGCACGTACTCAGGCCAGCACCAGCGTGTTCCCCACGCTACTGGCGCTCTTAATGAACTGCTACAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 72 bp TGGAAACGGCCAGAGAAAAGACCTAGGCGGTCGATGTaGCGGTGGAGGACACTGTGCAGCACAGCCAGATGG +
Preference number: 6 (lower is better)
Translates to: WKRPEKRPRRSM*RWRTLCSTARW
Trigger: CCATCTGGCTGTGCTGCACAGTGTCCTCCACCGCAACATCGACCGCCTAGGTCTTTTCTCTGGCCGTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 90 bp ACCCCAGACACTGAGCAGCAGCAGACGCACCTCGAAAGGTGCCAGTaGGCTAAATACTTCATGCATATTACCCAGGGCCGGAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: TPDTEQQQTHLERCQ*AKYFMHITQGRRQE
Trigger: CTCCTGCCTCCGGCCCTGGGTAATATGCATGAAGTATTTAGCCAACTGGCACCTTTCGAGGTGCGTCTGCTGCTGCTCAGTGTCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp CTCCCTGGAGAAGTCCCGAATGAAGCGACCCCGCTCTaGTTGGAAGATGAACTTCTGAGGCAAGGGCCCATG +
Preference number: 6 (lower is better)
Translates to: LPGEVPNEATPL*LEDELLRQGPM
Trigger: CATGGGCCCTTGCCTCAGAAGTTCATCTTCCAATCAGAGCGGGGTCGCTTCATTCGGGACTTCTCCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp AGAAGACCACAGCGAGCATGTTCCCGGGCTGAGAGTTaGTGGCCCAGAATGGGGTCTACGCCAGTCAGAAAA +
Preference number: 6 (lower is better)
Translates to: RRPQRACSRAES*WPRMGSTPVRK
Trigger: TTTTCTGACTGGCGTAGACCCCATTCTGGGCCACCAACTCTCAGCCCGGGAACATGCTCGCTGTGGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp AACAGAGGTATCCAGCAAGGCATCCACACACGCATCTaGGCAGCTACCAATGAGAGCCGAGAGGCACTGCAC +
Preference number: 6 (lower is better)
Translates to: NRGIQQGIHTRI*AATNESREALH
Trigger: GTGCAGTGCCTCTCGGCTCTCATTGGTAGCTGCCCAGATGCGTGTGTGGATGCCTTGCTGGATACCTCTGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp CCAGGTGACCTAGGATGCCTACAACTGAGGCAATCTTaGGCACCCGTTTCTCCGCAGGAATGGCAGGAGATC +
Preference number: 6 (lower is better)
Translates to: PGDLGCLQLRQS*APVSPQEWQEI
Trigger: GATCTCCTGCCATTCCTGCGGAGAAACGGGTGCCCAAGATTGCCTCAGTTGTAGGCATCCTAGGTCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp AGGCCAGAGAGGCTGACCACTAGCCCTGCATATAACTaGGTGGCCAAACTCAACTCTTCAGGGCTTCGGGCT +
Preference number: 6 (lower is better)
Translates to: RPERLTTSPAYN*VAKLNSSGLRA
Trigger: AGCCCGAAGCCCTGAAGAGTTGAGTTTGGCCACCCAGTTATATGCAGGGCTAGTGGTCAGCCTCTCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 72 bp GACCATGCACTAATCACAGGTGCCCAGGCCTTTGGGTaGGCCCGGATAAACTCAGACAGCACCTGCTGCACT +
Preference number: 6 (lower is better)
Translates to: DHALITGAQAFG*ARINSDSTCCT
Trigger: AGTGCAGCAGGTGCTGTCTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCTGTGATTAGTGCATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp CCCCATGAGGTCAATGGACCATGCACTAATCACAGGTaGCCAGGCCTTTGGGTTGGCCCGGATAAACTCAGA +
Preference number: 6 (lower is better)
Translates to: PHEVNGPCTNHR*PGLWVGPDKLR
Trigger: TCTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCTGTGATTAGTGCATGGTCCATTGACCTCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp AATGGACCATGCACTAATCACAGGTGCCCAGGCCTTTaGGTTGGCCCGGATAAACTCAGACAGCACCTGCTG +
Preference number: 6 (lower is better)
Translates to: NGPCTNHRCPGL*VGPDKLRQHLL
Trigger: CAGCAGGTGCTGTCTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCTGTGATTAGTGCATGGTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp TTGGGTGGCTTTAAGCCACGGCCGATGACTCCAGCATaGAAAACTGACCAAATCCCTCCAGGACCTGGCACA +
Preference number: 6 (lower is better)
Translates to: LGGFKPRPMTPA*KTDQIPPGPGT
Trigger: TGTGCCAGGTCCTGGAGGGATTTGGTCAGTTTTCCATGCTGGAGTCATCGGCCGTGGCTTAAAGCCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp GAGCAAGAAAAGGCTACGTCCCCTGTCGAAGGAGAGTaGACGGTGAAGGTGCCTGGAAACGGCCAGAGAAAA +
Preference number: 6 (lower is better)
Translates to: EQEKATSPVEGE*TVKVPGNGQRK
Trigger: TTTTCTCTGGCCGTTTCCAGGCACCTTCACCGTCCACTCTCCTTCGACAGGGGACGTAGCCTTTTCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp GCAAGGCATCCACACACGCATCTGGGCAGCTACCAATaGGAGCCGAGAGGCACTGCACATAGATGTCCATTA +
Preference number: 6 (lower is better)
Translates to: ARHPHTHLGSYQ*EPRGTAHRCPL
Trigger: TAATGGACATCTATGTGCAGTGCCTCTCGGCTCTCATTGGTAGCTGCCCAGATGCGTGTGTGGATGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp CTGAGCAGCAGCAGACGCACCTCGAAAGGTGCCAGTTaGCTAAATACTTCATGCATATTACCCAGGGCCGGA +
Preference number: 6 (lower is better)
Translates to: LSSSRRTSKGAS*LNTSCILPRAG
Trigger: TCCGGCCCTGGGTAATATGCATGAAGTATTTAGCCAACTGGCACCTTTCGAGGTGCGTCTGCTGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 90 bp AGAGTCTCATTGTCCCCATCTACTTGCCCACCAAACAGTTCTGTGTaGCCTCGATGTAAGGCTCCTTCAACCAGCAGCTGCAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: RVSLSPSTCPPNSSV*PRCKAPSTSSCRTA
Trigger: GGCTGTCCTGCAGCTGCTGGTTGAAGGAGCCTTACATCGAGGCAACACAGAACTGTTTGGTGGGCAAGTAGATGGGGACAATGAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS TCA 72 bp ACTGGACAAACTTGGGTGGCTTTAAGCCACGGCCGATaGCTCCAGCATGGAAAACTGACCAAATCCCTCCAG +
Preference number: 6 (lower is better)
Translates to: TGQTWVALSHGR*LQHGKLTKSLQ
Trigger: CTGGAGGGATTTGGTCAGTTTTCCATGCTGGAGTCATCGGCCGTGGCTTAAAGCCACCCAAGTTTGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS GCA 72 bp TGTCCCCATCTACTTGCCCACCAAACAGTTCTGTGTTaGCTCGATGTAAGGCTCCTTCAACCAGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: CPHLLAHQTVLC*LDVRLLQPAAA
Trigger: TGCAGCTGCTGGTTGAAGGAGCCTTACATCGAGGCAACACAGAACTGTTTGGTGGGCAAGTAGATGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CAA 72 bp TTGTCCCCATCTACTTGCCCACCAAACAGTTCTGTGTaGCCTCGATGTAAGGCTCCTTCAACCAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LSPSTCPPNSSV*PRCKAPSTSSC
Trigger: GCAGCTGCTGGTTGAAGGAGCCTTACATCGAGGCAACACAGAACTGTTTGGTGGGCAAGTAGATGGGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp AGAGGCACTGCACATAGATGTCCATTAATGTACGCGTaGCCCTACAACCCATCCACAGCTGTAGCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: RGTAHRCPLMYA*PYNPSTAVAVH
Trigger: ATGAACTGCTACAGCTGTGGATGGGTTGTAGGGCCACGCGTACATTAATGGACATCTATGTGCAGTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330574.2
CDS CCA 72 bp TCCAATCGTAACGTCTCTCCACACAGCTCTCCAACATaGTTTTTGAGCGCATCTAAAAAGGGCACCAAGCGG +
Preference number: 6 (lower is better)
Translates to: SNRNVSPHSSPT*FLSASKKGTKR
Trigger: CCGCTTGGTGCCCTTTTTAGATGCGCTCAAAAACCATGTTGGAGAGCTGTGTGGAGAGACGTTACGATTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330574.2