RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INTS4 (Homo sapiens)

Ensembl gene IDs: ENSG00000149262

Ensembl transcript IDs: ENST00000433818.6, ENST00000524766.5, ENST00000527522.1, ENST00000529807.5, ENST00000531059.1, ENST00000533180.1, ENST00000534064.6, ENST00000534408.5, ENST00000535943.1

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGGTGTGGGAGAGATAAACCTGAGTGATGAGCCGGTGCCGCCCTaGGCCAGGATTCCGGAAGTCTGCAGGCTTGGGGTGAATCATCTG +
Preference number: 1 (lower is better)
Translates to: SGVGEINLSDEPVPP*ARIPEVCRLGVNHL
Trigger: CAGATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCTGGCCCAGGGCGGCACCGGCTCATCACTCAGGTTTATCTCTCCCACACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CCA 90 bp ACATCTCACCACCCTCCATCCAGGGGCATTTTGGAATGCGAGCACTaGAGTTGTAGGCCAGCAGCAGCCTCACTTCCACCTGGCATGCCT +
Preference number: 1 (lower is better)
Translates to: TSHHPPSRGILECEH*SCRPAAASLPPGMP
Trigger: AGGCATGCCAGGTGGAAGTGAGGCTGCTGCTGGCCTACAACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGGAGGGTGGTGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR TCA 90 bp CTTGCTGAAGGGAATGGTGCCCTCGATGCTGGTTTCCACCTGTGGTaGCATCTCACCACCCTCCATCCAGGGGCATTTTGGAATGCGAGC +
Preference number: 1 (lower is better)
Translates to: LAEGNGALDAGFHLW*HLTTLHPGAFWNAS
Trigger: GCTCGCATTCCAAAATGCCCCTGGATGGAGGGTGGTGAGATGTCACCACAGGTGGAAACCAGCATCGAGGGCACCATTCCCTTCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CCA 90 bp GCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTaGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTA +
Preference number: 1 (lower is better)
Translates to: AWLILTPKKGPLGHG*EDCFCLSAVQVWAL
Trigger: TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR TCA 90 bp AGCGCCGTGCAGGTTTGGGCATTATATAAACTTTTACAGGCTTGCTaGAGGGAATGGTGCCCTCGATGCTGGTTTCCACCTGTGGTGACA +
Preference number: 1 (lower is better)
Translates to: SAVQVWALYKLLQAC*REWCPRCWFPPVVT
Trigger: TGTCACCACAGGTGGAAACCAGCATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAACCTGCACGGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR GCA 90 bp ACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTaGCTTAGCGCCGTGCAGGTTTGGGCATTATATAAACTTTTACAG +
Preference number: 1 (lower is better)
Translates to: TPKKGPLGHGWEDCF*LSAVQVWALYKLLQ
Trigger: CTGTAAAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CCA 90 bp TTCATGGAGCTGCAACATGGCTTTTATAGCTGCTGTTCTGACACGTaGGTCTTGGTCACTGAAGTAATCCCCTATAATCTTCTGGACATC +
Preference number: 1 (lower is better)
Translates to: FMELQHGFYSCCSDT*VLVTEVIPYNLLDI
Trigger: GATGTCCAGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTCCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR TCA 90 bp ACTCTTACCTTGCAGGCCACATCAACTAATCGCATTTGGATAGCTTaGTTCTCTGGTAGCTTAGTGCCAATTGCAAGCAAAGTATCCAGC +
Preference number: 1 (lower is better)
Translates to: TLTLQATSTNRIWIA*FSGSLVPIASKVSS
Trigger: GCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGGTAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
3UTR-3UTR CCA 90 bp GGCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTAAGCCTCACTTCCACCTaGCATGCCTCTGTCCAAGCG +
Preference number: 2 (lower is better)
Translates to: GHGWEDCFCLSAVQVWALSLTST*HASVQA
Trigger: CGCTTGGACAGAGGCATGCCAGGTGGAAGTGAGGCT...TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CAA 90 bp TTTCCACCTGTGGTGACATCTCACCACCCTCCATCCAGGGGCATTTaGGAATGCGAGCACTGGAGTTGTAGGCCAGCAGCAGCCTCACTT +
Preference number: 2 (lower is better)
Translates to: FPPVVTSHHPPSRGI*ECEHWSCRPAAASL
Trigger: AAGTGAGGCTGCTGCTGGCCTACAACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGGAGGGTGGTGAGATGTCACCACAGGTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CCA 90 bp GGCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTAGGAAGTCTGCAGGCTTaGGGTGAATCATCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: GHGWEDCFCLSAVQVWALGSLQA*GESSEP
Trigger: AGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCC...TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CCA 90 bp TTTGGGCATTATATAAACTTTTACAGGCTTGCTGAAGGGAATGGTGCCCTCGATGAGCCGGTGCCGCCCTaGGCCAGGATTCCGGAAGTC +
Preference number: 2 (lower is better)
Translates to: FGHYINFYRLAEGNGALDEPVPP*ARIPEV
Trigger: GACTTCCGGAATCCTGGCCCAGGGCGGCACCGGCTC...ATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CCA 90 bp GGCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTAGACAGCGAAGATAGGTaGCAGAGAAATCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: GHGWEDCFCLSAVQVWALDSEDR*QRNQLL
Trigger: GAGTAGCTGATTTCTCTGCCACCTATCTTCGCTGTC...TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CCA 90 bp GGCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATTCAGTCCTCTTTCATaGAGCTGCAACATGGCTTTT +
Preference number: 2 (lower is better)
Translates to: GHGWEDCFCLSAVQVWALFSPLS*SCNMAF
Trigger: AAAAGCCATGTTGCAGCTCCATGAAAGAGGACTGAA...TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR GCA 90 bp GGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATATAAACTTTGAATGGTGCCCTCGATaGTGGTTTCCACCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: GKTVFALAPCRFGHYINFEWCPR*WFPPVV
Trigger: CACCACAGGTGGAAACCAGCATCGAGGGCACCATTC...AAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CAA 90 bp GAGCTGCAACATGGCTTTTATAGCTGCTGTTCTGACACGTGGGTCTaGGTCACTGAAGTAATCCCCTATAATCTTCTGGACATCTCTGGC +
Preference number: 2 (lower is better)
Translates to: ELQHGFYSCCSDTWV*VTEVIPYNLLDISG
Trigger: GCCAGAGATGTCCAGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CCA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTGTAATCCCAATCCTTTaGGAGGGCCAAGCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTVIPIL*EGQAGG
Trigger: CCCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTAC...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
3UTR CAA 90 bp AATACAGGGGGCACAGTTAGATCTGAATTGTTAAGCAGAGGCTGCTaGATGCAGAAGATGAAGACAGAAGAAAGAATGAGCCTAGGCCGG +
Preference number: 2 (lower is better)
Translates to: NTGGTVRSELLSRGC*MQKMKTEERMSLGR
Trigger: CCGGCCTAGGCTCATTCTTTCTTCTGTCTTCATCTTCTGCATCAAGCAGCCTCTGCTTAACAATTCAGATCTAACTGTGCCCCCTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CCA 90 bp GCTGTCTTTGATAATAAACCCAACAATGATGCAATTTTCAGTCTCACAGATGGAGTAATCCCAATCCTTTaGGAGGGCCAAGCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: AVFDNKPNNDAIFSLTDGVIPIL*EGQAGG
Trigger: CCCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTAC...TCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATTATCAAAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
3UTR-3UTR TCA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCATTTACTAGCTGGGTaGCCTTGGATACTAAACAGC +
Preference number: 2 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWHLLAG*PWILNS
Trigger: GCTGTTTAGTATCCAAGGTCACCCAGCTAGTAAATG...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527522.1
3UTR-3UTR GCA 90 bp GGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATATAAACTTTAAGGAATTGGGACAATaGTTTCAGGATAGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: GKTVFALAPCRFGHYINFKELGQ*FQDRAD
Trigger: GTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTT...AAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CCA 90 bp AATACAAAGCACCATAACAAGCAGAGTGCATTATTAGGCACAATATACACAGTAGTAATCCCAATCCTTTaGGAGGGCCAAGCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: NTKHHNKQSALLGTIYTVVIPIL*EGQAGG
Trigger: CCCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTAC...TACTGTGTATATTGTGCCTAATAATGCACTCTGCTTGTTATGGTGCTTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
3UTR-3UTR TCA 90 bp AAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCCACAACGGAAAATAGATCACTaGGAGATCGAAAACTTCTTG +
Preference number: 2 (lower is better)
Translates to: KEVEVDWGRGKMKQVWPQRKIDH*EIENFL
Trigger: CAAGAAGTTTTCGATCTCTCAGTGATCTATTTTCCG...TTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000527522.1
3UTR-3UTR CCA 90 bp AAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCCACAACTTCCATTTACTAGCTaGGTGACCTTGGATACTAAA +
Preference number: 2 (lower is better)
Translates to: KEVEVDWGRGKMKQVWPQLPFTS*VTLDTK
Trigger: TTTAGTATCCAAGGTCACCCAGCTAGTAAATGGAAG...TTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527522.1
3UTR-3UTR GCA 90 bp AATACAAAGCACCATAACAAGCAGAGTGCATTATTAGGCACAATATACACAGTATTTATACTCTTACCTTaGAGGCCACATCAACTAATC +
Preference number: 2 (lower is better)
Translates to: NTKHHNKQSALLGTIYTVFILLP*RPHQLI
Trigger: GATTAGTTGATGTGGCCTGCAAGGTAAGAGTATAAA...TACTGTGTATATTGTGCCTAATAATGCACTCTGCTTGTTATGGTGCTTTGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
3UTR GCA 72 bp GAGCCGGTGCCGCCCTGGGCCAGGATTCCGGAAGTCTaGAGGCTTGGGGTGAATCATCTGAGCCTGGCCATC +
Preference number: 3 (lower is better)
Translates to: EPVPPWARIPEV*RLGVNHLSLAI
Trigger: GATGGCCAGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCTGGCCCAGGGCGGCACCGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CCA 72 bp GCCGCCCTGGGCCAGGATTCCGGAAGTCTGCAGGCTTaGGGTGAATCATCTGAGCCTGGCCATCTGGATATA +
Preference number: 3 (lower is better)
Translates to: AALGQDSGSLQA*GESSEPGHLDI
Trigger: TATATCCAGATGGCCAGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCTGGCCCAGGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR TCA 72 bp GGGAATGGTGCCCTCGATGCTGGTTTCCACCTGTGGTaGCATCTCACCACCCTCCATCCAGGGGCATTTTGG +
Preference number: 3 (lower is better)
Translates to: GNGALDAGFHLW*HLTTLHPGAFW
Trigger: CCAAAATGCCCCTGGATGGAGGGTGGTGAGATGTCACCACAGGTGGAAACCAGCATCGAGGGCACCATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CCA 72 bp CACCCTCCATCCAGGGGCATTTTGGAATGCGAGCACTaGAGTTGTAGGCCAGCAGCAGCCTCACTTCCACCT +
Preference number: 3 (lower is better)
Translates to: HPPSRGILECEH*SCRPAAASLPP
Trigger: AGGTGGAAGTGAGGCTGCTGCTGGCCTACAACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR GCA 72 bp ACATCTCACCACCCTCCATCCAGGGGCATTTTGGAATaGGAGCACTGGAGTTGTAGGCCAGCAGCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: TSHHPPSRGILE*EHWSCRPAAAS
Trigger: TGAGGCTGCTGCTGGCCTACAACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGGAGGGTGGTGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CCA 72 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTaGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: ILTPKKGPLGHG*EDCFCLSAVQV
Trigger: AACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CCA 72 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTaGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGC +
Preference number: 3 (lower is better)
Translates to: AYTSIPGEVLQA*LILTPKKGPLG
Trigger: GCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
3UTR GCA 72 bp AAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTaGCTTAGCGCCGTGCAGGTTTGGGCATTATATAAA +
Preference number: 3 (lower is better)
Translates to: KGPLGHGWEDCF*LSAVQVWALYK
Trigger: TTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CAA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTTCCAAAGAGCCAAGATaGCCAAGTAACTGCAGGCAC +
Preference number: 3 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPSKEPR*PSNCRH
Trigger: GTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGA...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CAA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGTGTAATCCCAATCCTTaGGGAGGGCCAAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWCNPNP*GGPSRR
Trigger: CCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTACA...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527522.1
3UTR TCA 72 bp CAGGTTTGGGCATTATATAAACTTTTACAGGCTTGCTaGAGGGAATGGTGCCCTCGATGCTGGTTTCCACCT +
Preference number: 3 (lower is better)
Translates to: QVWALYKLLQAC*REWCPRCWFPP
Trigger: AGGTGGAAACCAGCATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR GCA 72 bp TCCTCTTTCATGGAGCTGCAACATGGCTTTTATAGCTaGTGTTCTGACACGTGGGTCTTGGTCACTGAAGTA +
Preference number: 3 (lower is better)
Translates to: SSFMELQHGFYS*CSDTWVLVTEV
Trigger: TACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTCCATGAAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR GCA 72 bp GCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTaGAGGTTTGGGCATTATATAAACTTTTACAGGCTT +
Preference number: 3 (lower is better)
Translates to: ATVGKTVFALAP*RFGHYINFYRL
Trigger: AAGCCTGTAAAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CAA 90 bp GCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGAGATTGTAATCCCAATCCTTaGGGAGGGCCAAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: AIFSLTDGSFSENRSLRDCNPNP*GGPSRR
Trigger: CCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTACA...ATCTCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524766.5
3UTR TCA 72 bp GTGGCAGAGAAATCAGCTACTCCTGCCAATTCAGATTaGAGTTCTCCAAGTCTTTGCAGATCCCTTAAGGTC +
Preference number: 3 (lower is better)
Translates to: VAEKSATPANSD*SSPSLCRSLKV
Trigger: GACCTTAAGGGATCTGCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTCTCTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR GCA 72 bp ACAGCGAAGATAGGTGGCAGAGAAATCAGCTACTCCTaGCAATTCAGATTGAAGTTCTCCAAGTCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: TAKIGGREISYS*QFRLKFSKSLQ
Trigger: CTGCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTCTCTGCCACCTATCTTCGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR-3UTR CAA 90 bp TCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACAATTGTAATCCCAATCCTTaGGGAGGGCCAAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: SIMQSGENPAVFDNKPNNCNPNP*GGPSRR
Trigger: CCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTACA...ATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
3UTR CCA 72 bp CTGCAACATGGCTTTTATAGCTGCTGTTCTGACACGTaGGTCTTGGTCACTGAAGTAATCCCCTATAATCTT +
Preference number: 3 (lower is better)
Translates to: LQHGFYSCCSDT*VLVTEVIPYNL
Trigger: AAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR TCA 72 bp TTGCAGGCCACATCAACTAATCGCATTTGGATAGCTTaGTTCTCTGGTAGCTTAGTGCCAATTGCAAGCAAA +
Preference number: 3 (lower is better)
Translates to: LQATSTNRIWIA*FSGSLVPIASK
Trigger: TTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
3UTR TCA 72 bp CAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTaGCCTTGGATACTAAACAGCTCTAAGCTTAGTTCC +
Preference number: 3 (lower is better)
Translates to: QVQIHTFHLLAG*PWILNSSKLSS
Trigger: GGAACTAAGCTTAGAGCTGTTTAGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
3UTR-3UTR CAA 90 bp GCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCACAGAAATCCTGATTTaGGTCAGATGTGGTAGCTCA +
Preference number: 3 (lower is better)
Translates to: ASSIMQSGENPAVFDNKPTEILI*VRCGSS
Trigger: TGAGCTACCACATCTGACCAAAATCAGGATTTCTGT...GGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524766.5
3UTR GCA 72 bp TCCAAAGTAAAATCAATTCTACAGGGTTCTAGGGGTTaGTGTGTATACACAAAGAGGCTAATTAACCTCCAA +
Preference number: 3 (lower is better)
Translates to: SKVKSILQGSRG*CVYTKRLINLQ
Trigger: TTGGAGGTTAATTAGCCTCTTTGTGTATACACAGCAACCCCTAGAACCCTGTAGAATTGATTTTACTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534408.5
3UTR TCA 72 bp ACTTACTTGAAGGATTGTGAGGACCAAATGAAAAACTaGATACAAAGCACCATAACAAGCAGAGTGCATTAT +
Preference number: 3 (lower is better)
Translates to: TYLKDCEDQMKN*IQSTITSRVHY
Trigger: ATAATGCACTCTGCTTGTTATGGTGCTTTGTATTCAGTTTTTCATTTGGTCCTCACAATCCTTCAAGTAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR GCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAACCCGCTTCTTAAGGTaGGCCGCCATGCCTACCCGC +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWETRFLR*AAMPTR
Trigger: GCGGGTAGGCATGGCGGCGCACCTTAAGAAGCGGGT...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGTGGCTGAGGCTTTGTaGATCTGCTCTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEVAEAL*ICSGSG
Trigger: CCCGCTTCCAGAGCAGATCCACAAAGCCTCAGCCAC...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTGAGCCGGTGCCGCCCTaGGCCAGGATTCCGGAAGTC +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPEPVPP*ARIPEV
Trigger: GACTTCCGGAATCCTGGCCCAGGGCGGCACCGGCTC...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCGAGCCGGTGCCGCCCTaGGCCAGGATTCCGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGEPVPP*ARIPEV
Trigger: GACTTCCGGAATCCTGGCCCAGGGCGGCACCGGCTC...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAAGCCTCACTTCCACCTaGCATGCCTCTGTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWESLTST*HASVQA
Trigger: CGCTTGGACAGAGGCATGCCAGGTGGAAGTGAGGCT...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGGTTTCCACCTGTGGTaGCATCTCACCACCCTCCAT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEGFHLW*HLTTLH
Trigger: ATGGAGGGTGGTGAGATGTCACCACAGGTGGAAACC...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTCACTTCCACCTGGCATaGCTCTGTCCAAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCHFHLA*LCPSGV
Trigger: CACACCGCTTGGACAGAGGCATGCCAGGTGGAAGTG...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTGTGGCTGAGGCTTTGTaGATCTGCTCTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCVAEAL*ICSGSG
Trigger: CCCGCTTCCAGAGCAGATCCACAAAGCCTCAGCCAC...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTGAATGGTGCCCTCGATaGTGGTTTCCACCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCEWCPR*WFPPVV
Trigger: CACCACAGGTGGAAACCAGCATCGAGGGCACCATTC...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGGAAGTCTGCAGGCTTaGGGTGAATCATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEGSLQA*GESSEP
Trigger: AGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCC...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAATTGGAATGCGAGCACTaGAGTTGTAGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWELECEH*SCRPAA
Trigger: TGCTGCTGGCCTACAACTCCAGTGCTCGCATTCCAA...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTGGTGCCCTCGATGCTaGTTTCCACCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCWCPRC*FPPVVT
Trigger: TGTCACCACAGGTGGAAACCAGCATCGAGGGCACCA...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAACACATCAATTCCAGGTaGAGTGCTTCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEHINSR*SASGLA
Trigger: AGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTG...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGCTGAACCACTTTCGTaGATTCCTCATAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEAEPLS*IPHKPA
Trigger: AGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGC...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR TCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGTTCCAAGAGAATCCTaGCTACTCCCTCTACGCTTT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEVPRES*LLPLRF
Trigger: AAAGCGTAGAGGGAGTAGTCAGGATTCTCTTGGAAC...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR TCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCAGGCTTGGCTCATTCTaGCACCTAAGAAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCRLGSF*HLRRAL
Trigger: GAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCT...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTCACATCAATTCCAGGTaGAGTGCTTCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCHINSR*SASGLA
Trigger: AGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTG...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAACCAAAGAGCCAAGATTaGCAAGTAACTGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEPKSQD*QVTAGT
Trigger: AGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGG...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTAGGATTCCGGAAGTCTaGAGGCTTGGGGTGAATCAT +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCRIPEV*RLGVNH
Trigger: ATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCT...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTAGGGGCATTTTGGAATaGGAGCACTGGAGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCRGILE*EHWSCR
Trigger: CCTACAACTCCAGTGCTCGCATTCCAAAATGCCCCT...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAATCCCCTATAATCTTCTaGACATCTCTGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWESPIIF*TSLAAR
Trigger: CCTAGCTGCCAGAGATGTCCAGAAGATTATAGGGGA...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACAGCGAAGATAGGTaGCAGAGAAATCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEDSEDR*QRNQLL
Trigger: GAGTAGCTGATTTCTCTGCCACCTATCTTCGCTGTC...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCAGCCTCACTTCCACCTaGCATGCCTCTGTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGSLTST*HASVQA
Trigger: CGCTTGGACAGAGGCATGCCAGGTGGAAGTGAGGCT...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAACGCATTTGGATAGCTTaGTTCTCTGGTAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWERIWIA*FSGSLV
Trigger: CACTAAGCTACCAGAGAATCAAGCTATCCAAATGCG...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534064.6
CDS-3UTR GCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACACCCGCTTCTTAAGGTaGGCCGCCATGCCTACCCGC +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHTRFLR*AAMPTR
Trigger: GCGGGTAGGCATGGCGGCGCACCTTAAGAAGCGGGT...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTGAATGGTGCCCTCGATaGTGGTTTCCACCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPEWCPR*WFPPVV
Trigger: CACCACAGGTGGAAACCAGCATCGAGGGCACCATTC...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTTGGTGCCCTCGATGCTaGTTTCCACCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPWCPRC*FPPVVT
Trigger: TGTCACCACAGGTGGAAACCAGCATCGAGGGCACCA...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAACTTCTGCATCTTTTGTaGCACTTTTCTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWELLHLL*HFSPKS
Trigger: GCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAG...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR TCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTCTTTTACAGGCTTGCTaGAGGGAATGGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPLLQAC*REWCPR
Trigger: TCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAG...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCTTTTACAGGCTTGCTaGAGGGAATGGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGLLQAC*REWCPR
Trigger: TCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAG...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTACCCGCTTCTTAAGGTaGGCCGCCATGCCTACCCGC +
Preference number: 4 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTTRFLR*AAMPTR
Trigger: GCGGGTAGGCATGGCGGCGCACCTTAAGAAGCGGGT...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTGTATTGCAAAGCATCTaGTGGGGAGGTAGCTTTACA +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCVLQSI*WGGSFT
Trigger: TGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATAC...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAATTCCACAACTTTTCCTaGAAGGCCTTGATGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEFHNFS*KALMRS
Trigger: ACTTCTCATCAAGGCCTTGCAGGAAAAGTTGTGGAA...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGCACTTCCACCTGGCATaGCTCTGTCCAAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKHFHLA*LCPSGV
Trigger: CACACCGCTTGGACAGAGGCATGCCAGGTGGAAGTG...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCTCTTCTGGACATCTCTaGCAGCTAGGCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCSSGHL*QLGLLH
Trigger: ATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGA...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAATTCAGTCCTCTTTCATaGAGCTGCAACATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEFSPLS*SCNMAF
Trigger: AAAAGCCATGTTGCAGCTCCATGAAAGAGGACTGAA...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTGGAAGTCTGCAGGCTTaGGGTGAATCATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPGSLQA*GESSEP
Trigger: AGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCC...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGAGCCTCACTTCCACCTaGCATGCCTCTGTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKSLTST*HASVQA
Trigger: CGCTTGGACAGAGGCATGCCAGGTGGAAGTGAGGCT...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGAGGCTTGGCTCATTCTaGCACCTAAGAAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKRLGSF*HLRRAL
Trigger: GAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCT...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp GGCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTAGTGTTTGATACCAGATaGGACTGTAAGGGTCACATA +
Preference number: 4 (lower is better)
Translates to: GHGWEDCFCLSAVQVWALVFDTR*DCKGHI
Trigger: TATGTGACCCTTACAGTCTCATCTGGTATCAAACAC...TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR GCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCCATGGCTTTTATAGCTaGTGTTCTGACACGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCHGFYS*CSDTWV
Trigger: GACCCACGTGTCAGAACAGCAGCTATAAAAGCCATG...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp GGCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTAAAGGAATTGGGACAATaGTTTCAGGATAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GHGWEDCFCLSAVQVWALKELGQ*FQDRAD
Trigger: GTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTT...TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR GCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGAAATCAGCTACTCCTaGCAATTCAGATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEEISYS*QFRLKF
Trigger: GAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTC...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCTGGGAAGACTGTTTTTaGCTTAGCGCCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGWEDCF*LSAVQV
Trigger: AACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCA...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCCAATTCCAGGTGAAGTaGTTCAGGCTTGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCQFQVK*FRLGSF
Trigger: GAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTG...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp CACAGATGGATCATTCTCGTCTGTAATCCCAATCCTTTGGGAGGGCCAAGCAGGGGCTTCCTGGCAAACTaGAGCAAGTATTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: HRWIILVCNPNPLGGPSRGFLAN*SKYCKA
Trigger: TGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCC...CCTGCTTGGCCCTCCCAAAGGATTGGGATTACAGACGAGAATGATCCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTCCTCGACAGGCTTCCTaGCAAACTGGAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPPRQAS*QTGASI
Trigger: AATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGG...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCGACAGGCTTCCTaGCAAACTGGAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGPRQAS*QTGASI
Trigger: AATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGG...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACGTGGCTGAGGCTTTGTaGATCTGCTCTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHVAEAL*ICSGSG
Trigger: CCCGCTTCCAGAGCAGATCCACAAAGCCTCAGCCAC...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCATCCAGGGGCATTTTaGAATGCGAGCACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGHPGAF*NASTGV
Trigger: AACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATG...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCGAAGTGCTTCAGGCTTaGCTCATTCTGACACCTAAG +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCEVLQA*LILTPK
Trigger: CTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTC...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAATTATTTCTTACACCATaGGACGTATCTGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: QAWLILTPKKGPLGHGWELFLTP*DVSVRC
Trigger: ACATCTGACAGATACGTCTCATGGTGTAAGAAATAA...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR TCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTGAAGGTGTGATCTaGGAACAATGCTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGPEGVI*EQCWHC
Trigger: ACAATGCCAGCATTGTTCTCAGATCACACCTTCAGG...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR TCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCCCTGCCAATTCAGATTaGAGTTCTCCAAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCPANSD*SSPSLC
Trigger: GCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGG...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp GCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGAGATACCCGCTTCTTAAGGTaGGCCGCCATGCCTACCCGC +
Preference number: 4 (lower is better)
Translates to: AIFSLTDGSFSENRSLRDTRFLR*AAMPTR
Trigger: GCGGGTAGGCATGGCGGCGCACCTTAAGAAGCGGGT...ATCTCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524766.5
CDS-3UTR GCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTGACGTATCTGTCAGATaGTTGCAGGCCACATCAACT +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPDVSVR*LQATST
Trigger: AGTTGATGTGGCCTGCAAGCATCTGACAGATACGTC...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534064.6
CDS-3UTR CCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCAGCAATTTCCTCCTGTaGCTGAACCACTTTCGTGAA +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCSNFLL*LNHFRE
Trigger: TTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCT...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTAGCGCCGTGCAGGTTTaGGCATTATATAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCSAVQV*ALYKLL
Trigger: TAAAAGTTTATATAATGCCCAAACCTGCACGGCGCT...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTCCTGCCAATTCAGATTaGAGTTCTCCAAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPPANSD*SSPSLC
Trigger: GCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGG...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTAGGTTTCCACCTGTGGTaGCATCTCACCACCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLGFHLW*HLTTLH
Trigger: ATGGAGGGTGGTGAGATGTCACCACAGGTGGAAACC...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCGGTTTCCACCTGTGGTaGCATCTCACCACCCTCCAT +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSGFHLW*HLTTLH
Trigger: ATGGAGGGTGGTGAGATGTCACCACAGGTGGAAACC...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp GCTGTCTTTGATAATAAACCCAACAATGATGCAATTTTCAGTCTCACAGATGGAACCCGCTTCTTAAGGTaGGCCGCCATGCCTACCCGC +
Preference number: 4 (lower is better)
Translates to: AVFDNKPNNDAIFSLTDGTRFLR*AAMPTR
Trigger: GCGGGTAGGCATGGCGGCGCACCTTAAGAAGCGGGT...TCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATTATCAAAGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR GCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCTTCCACAACTTTTCCTaGAAGGCCTTGATGAGAAGT +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCFHNFS*KALMRS
Trigger: ACTTCTCATCAAGGCCTTGCAGGAAAAGTTGTGGAA...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATCACTTCCACCTGGCATaGCTCTGTCCAAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINHFHLA*LCPSGV
Trigger: CACACCGCTTGGACAGAGGCATGCCAGGTGGAAGTG...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGAGGGGCATTTTGGAATaGGAGCACTGGAGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKRGILE*EHWSCR
Trigger: CCTACAACTCCAGTGCTCGCATTCCAAAATGCCCCT...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCTTTGCCTTAGCGCCGTaGAGGTTTGGGCATTATATA +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGFALAP*RFGHYI
Trigger: TATATAATGCCCAAACCTGCACGGCGCTAAGGCAAA...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp GGCCACGGTTGGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATTACACAGATCTATGTaGAGTGCTGCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: GHGWEDCFCLSAVQVWALLHRSM*SAADLL
Trigger: AAGTAAATCTGCAGCACTCCACATAGATCTGTGTAA...TAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCAACCGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACTTGGAATGCGAGCACTaGAGTTGTAGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHLECEH*SCRPAA
Trigger: TGCTGCTGGCCTACAACTCCAGTGCTCGCATTCCAA...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp CTGGCAGCTAGGCCTTCTGCATCTTTTGTGACACTTTTCTCCAAAGAGCCAAGAGAAGTGCTTCAGGCTTaGCTCATTCTGACACCTAAG +
Preference number: 4 (lower is better)
Translates to: LAARPSASFVTLFSKEPREVLQA*LILTPK
Trigger: CTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTC...TCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR TCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATAGGCTTGGCTCATTCTaGCACCTAAGAAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINRLGSF*HLRRAL
Trigger: GAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCT...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTGTGTTTGATACCAGATaGGACTGTAAGGGTCACATA +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPVFDTR*DCKGHI
Trigger: TATGTGACCCTTACAGTCTCATCTGGTATCAAACAC...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCTCAGATGTTTCATTCTaGAGGATGTTGATGGCATCA +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCSDVSF*RMLMAS
Trigger: TGATGCCATCAACATCCTGCAGAATGAAACATCTGA...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR GCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTCCTCTTTCATGGAGCTaGAACATGGCTTTTATAGCT +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPPLSWS*NMAFIA
Trigger: AGCTATAAAAGCCATGTTGCAGCTCCATGAAAGAGG...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCGAAATCAGCTACTCCTaGCAATTCAGATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCEISYS*QFRLKF
Trigger: GAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTC...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACAGGATTCCGGAAGTCTaGAGGCTTGGGGTGAATCAT +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHRIPEV*RLGVNH
Trigger: ATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCT...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTTCACCCAGACTGGAGTaGAGTGGCTCAATCTCCACT +
Preference number: 4 (lower is better)
Translates to: SFCRMLMASSIMQSGENPSPRLE*SGSIST
Trigger: AGTGGAGATTGAGCCACTGCACTCCAGTCTGGGTGA...AGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGTTGCAAAGCATCTGCTaGGGAGGTAGCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKLQSIC*GGSFTQ
Trigger: CTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAA...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGTGCTGTTCTGACACGTaGGTCTTGGTCACTGAAGTA +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKCCSDT*VLVTEV
Trigger: TACTTCAGTGACCAAGACCCACGTGTCAGAACAGCA...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCTTGGAATGCGAGCACTaGAGTTGTAGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSLECEH*SCRPAA
Trigger: TGCTGCTGGCCTACAACTCCAGTGCTCGCATTCCAA...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTGGTGCCCTCGATGCTaGTTTCCACCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINWCPRC*FPPVVT
Trigger: TGTCACCACAGGTGGAAACCAGCATCGAGGGCACCA...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACCCTCTAGGCCACGGTTaGGAAGACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHPLGHG*EDCFCL
Trigger: AAGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGG...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTAGCCTCCCTAGTAGCTaGGATTACAGGCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: SFCRMLMASSIMQSGENPSLPSS*DYRQAS
Trigger: TGATGCCTGCCTGTAATCCCAGCTACTAGGGAGGCT...AGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR TCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGCCTGCCAATTCAGATTaGAGTTCTCCAAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKPANSD*SSPSLC
Trigger: GCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGG...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCAGGTaGAGTGCTTCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLHINSR*SASGLA
Trigger: AGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTG...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCATCTATGTGGAGTGCTaGAGATTTACTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCIYVEC*RFTWFC
Trigger: ACAAAACCAAGTAAATCTGCAGCACTCCACATAGAT...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCAGATCTATGTGGAGTaGTGCAGATTTACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGQIYVE*CRFTWF
Trigger: AAACCAAGTAAATCTGCAGCACTCCACATAGATCTG...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGTATTGCAAAGCATCTaGTGGGGAGGTAGCTTTACA +
Preference number: 4 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKVLQSI*WGGSFT
Trigger: TGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATAC...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp CTGGCAGCTAGGCCTTCTGCATCTTTTGTGACACTTTTCTCCAAAGAGCCAAGATTGTTAAGCAGAGGCTaGTTGATGCAGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: LAARPSASFVTLFSKEPRLLSRG*LMQKMK
Trigger: CTTCATCTTCTGCATCAAGCAGCCTCTGCTTAACAA...TCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR GCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCAGGATTCCGGAAGTCTaGAGGCTTGGGGTGAATCAT +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSRIPEV*RLGVNH
Trigger: ATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCT...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCAGGGGCATTTTGGAATaGGAGCACTGGAGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSRGILE*EHWSCR
Trigger: CCTACAACTCCAGTGCTCGCATTCCAAAATGCCCCT...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TTTGGGCATTATATAAACTTTTACAGGCTTGCTGAAGGGAATGGTGCCCTCGATTGGGAAGACTGTTTTTaGCTTAGCGCCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FGHYINFYRLAEGNGALDWEDCF*LSAVQV
Trigger: AACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCCA...ATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR GCA 90 bp CAGTCTCACAGATGGATCATTCTCGTCTGTAATCCCAATCCTTTGGGAGGGCCAGATGAGATTTCATTCTaGAGGATGTTGATGGCATCA +
Preference number: 4 (lower is better)
Translates to: QSHRWIILVCNPNPLGGPDEISF*RMLMAS
Trigger: TGATGCCATCAACATCCTGCAGAATGAAATCTCATC...TGGCCCTCCCAAAGGATTGGGATTACAGACGAGAATGATCCATCTGTGAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR GCA 90 bp CACAGATGGATCATTCTCGTCTGTAATCCCAATCCTTTGGGAGGGCCAAGCAGGTTTATACTCTTACCTTaGAGGCCACATCAACTAATC +
Preference number: 4 (lower is better)
Translates to: HRWIILVCNPNPLGGPSRFILLP*RPHQLI
Trigger: GATTAGTTGATGTGGCCTGCAAGGTAAGAGTATAAA...CCTGCTTGGCCCTCCCAAAGGATTGGGATTACAGACGAGAATGATCCATCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp GGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATATAAACTTTGGCTTCCTGGCAAACTaGAGCAAGTATTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GKTVFALAPCRFGHYINFGFLAN*SKYCKA
Trigger: TGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCC...AAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACGGCTTCCTGGCAAACTaGAGCAAGTATTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHGFLAN*SKYCKA
Trigger: TGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCC...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTCCTCGACAGGCTTCCTaGCAAACTGGAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTPRQAS*QTGASI
Trigger: AATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGG...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CCA 90 bp GGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATATAAACTTTTCCCCTATAATCTTCTaGACATCTCTGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GKTVFALAPCRFGHYINFSPIIF*TSLAAR
Trigger: CCTAGCTGCCAGAGATGTCCAGAAGATTATAGGGGA...AAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CCA 90 bp GGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATATAAACTTTGACAGCGAAGATAGGTaGCAGAGAAATCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: GKTVFALAPCRFGHYINFDSEDR*QRNQLL
Trigger: GAGTAGCTGATTTCTCTGCCACCTATCTTCGCTGTC...AAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACGACAGCGAAGATAGGTaGCAGAGAAATCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHDSEDR*QRNQLL
Trigger: GAGTAGCTGATTTCTCTGCCACCTATCTTCGCTGTC...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATGGAAGTCTGCAGGCTTaGGGTGAATCATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINGSLQA*GESSEP
Trigger: AGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCC...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACATCCAGGGGCATTTTaGAATGCGAGCACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLHPGAF*NASTGV
Trigger: AACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATG...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
3UTR CAA 72 bp CATGGCTTTTATAGCTGCTGTTCTGACACGTGGGTCTaGGTCACTGAAGTAATCCCCTATAATCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: HGFYSCCSDTWV*VTEVIPYNLLD
Trigger: GTCCAGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
3UTR CAA 72 bp ACAGGATGGAATACAGGGGGCACAGTTAGATCTGAATaGTTAAGCAGAGGCTGCTTGATGCAGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: TGWNTGGTVRSE*LSRGCLMQKMK
Trigger: CTTCATCTTCTGCATCAAGCAGCCTCTGCTTAACAATTCAGATCTAACTGTGCCCCCTGTATTCCATCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR TCA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTGCTGAACCACTTTCGTaGATTCCTCATAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTAEPLS*IPHKPA
Trigger: AGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGC...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR TCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACCTGAAGGTGTGATCTaGGAACAATGCTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLPEGVI*EQCWHC
Trigger: ACAATGCCAGCATTGTTCTCAGATCACACCTTCAGG...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCATCTATGTGGAGTGCTaGAGATTTACTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGIYVEC*RFTWFC
Trigger: ACAAAACCAAGTAAATCTGCAGCACTCCACATAGAT...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp TCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGGGCAGATTGCCAAGTAACTaGAGGCACTTATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: SIPGEVLQAWLILTPKKGRLPSN*RHLFLT
Trigger: TGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCT...GCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCCCAAAGAGCCAAGATTaGCAAGTAACTGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSPKSQD*QVTAGT
Trigger: AGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGG...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCCAATTCCAGGTGAAGTaGTTCAGGCTTGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSQFQVK*FRLGSF
Trigger: GAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTG...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTATTGCAAAGCATCTGCTaGGGAGGTAGCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLLQSIC*GGSFTQ
Trigger: CTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAA...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGTTGCAAAGCATCTGCTaGGGAGGTAGCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWLQSIC*GGSFTQ
Trigger: CTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAA...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CCA 90 bp GCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCCCTCGACAGGCTTCCTaGCAAACTGGAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: ASSIMQSGENPAVFDNKPPRQAS*QTGASI
Trigger: AATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGG...GGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCTTCTGGACATCTCTaGCAGCTAGGCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINSSGHL*QLGLLH
Trigger: ATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGA...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCTGCTGTTCTGACACGTaGGTCTTGGTCACTGAAGTA +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSCCSDT*VLVTEV
Trigger: TACTTCAGTGACCAAGACCCACGTGTCAGAACAGCA...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATCATCCAGGGGCATTTTaGAATGCGAGCACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINHPGAF*NASTGV
Trigger: AACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATG...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATCCTCTAGGCCACGGTTaGGAAGACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINPLGHG*EDCFCL
Trigger: AAGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGG...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCGAAGTGCTTCAGGCTTaGCTCATTCTGACACCTAAG +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSEVLQA*LILTPK
Trigger: CTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTC...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACAATGTAATCCCAATCCTTTaGGAGGGCCAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SIMQSGENPAVFDNKPNNVIPIL*EGQAGG
Trigger: CCCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTAC...ATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp GTCCTCAGTTACCAGTTTAGGATGGATCTGAATAGATTTTATACTCTTACCTTGGTAATCCCAATCCTTTaGGAGGGCCAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLSYQFRMDLNRFYTLTLVIPIL*EGQAGG
Trigger: CCCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTAC...CAAGGTAAGAGTATAAAATCTATTCAGATCCATCCTAAACTGGTAACTGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp CTAGGACTTGATGAGATTTCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGACTGGAGTGCAGTaGCTCAATCTCCACTCACAT +
Preference number: 4 (lower is better)
Translates to: LGLDEISFCRMLMASSIMQTGVQ*LNLHSH
Trigger: ATGTGAGTGGAGATTGAGCCACTGCACTCCAGTCTG...CATTATGGATGATGCCATCAACATCCTGCAGAATGAAATCTCATCAAGTCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR TCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACGTGTTTGATACCAGATaGGACTGTAAGGGTCACATA +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHVFDTR*DCKGHI
Trigger: TATGTGACCCTTACAGTCTCATCTGGTATCAAACAC...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTCATTTACTAGCTGGGTaGCCTTGGATACTAAACAGC +
Preference number: 4 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTHLLAG*PWILNS
Trigger: GCTGTTTAGTATCCAAGGTCACCCAGCTAGTAAATG...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGGTATTGCAAAGCATCTaGTGGGGAGGTAGCTTTACA +
Preference number: 4 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWVLQSI*WGGSFT
Trigger: TGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATAC...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCTTTGCCTTAGCGCCGTaGAGGTTTGGGCATTATATA +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSFALAP*RFGHYI
Trigger: TATATAATGCCCAAACCTGCACGGCGCTAAGGCAAA...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATCAATTCCAGGTGAAGTaGTTCAGGCTTGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINQFQVK*FRLGSF
Trigger: GAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTG...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CCA 90 bp TTTGGGCATTATATAAACTTTTACAGGCTTGCTGAAGGGAATGGTGCCCTCGATAGCAATTTCCTCCTGTaGCTGAACCACTTTCGTGAA +
Preference number: 4 (lower is better)
Translates to: FGHYINFYRLAEGNGALDSNFLL*LNHFRE
Trigger: TTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCT...ATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CCA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTAGCAATTTCCTCCTGTaGCTGAACCACTTTCGTGAA +
Preference number: 4 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTSNFLL*LNHFRE
Trigger: TTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCT...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CCA 90 bp GCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCTTGCAAAGCATCTGCTaGGGAGGTAGCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: ASSIMQSGENPAVFDNKPLQSIC*GGSFTQ
Trigger: CTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAA...GGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp AAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCCACAAGGCTTCCTGGCAAACTaGAGCAAGTATTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: KEVEVDWGRGKMKQVWPQGFLAN*SKYCKA
Trigger: TGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCC...TTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CCA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTTTTCAGTCTCACAGATaGATCATTCTCCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPFQSHR*IILLVI
Trigger: TATTACAAGGAGAATGATCCATCTGTGAGACTGAAA...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR TCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACTTCTGCATCTTTTGTaGCACTTTTCTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLLLHLL*HFSPKS
Trigger: GCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAG...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR TCA 90 bp AAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCCACAAGGGGAAGAGGGAAAATaGAACAAGTTTGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: KEVEVDWGRGKMKQVWPQGEEGK*NKFGHK
Trigger: TTTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCC...TTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp GCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCGTATTGCAAAGCATCTaGTGGGGAGGTAGCTTTACA +
Preference number: 4 (lower is better)
Translates to: ASSIMQSGENPAVFDNKPVLQSI*WGGSFT
Trigger: TGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATAC...GGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR GCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCCCTCTTTCATGGAGCTaGAACATGGCTTTTATAGCT +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSPLSWS*NMAFIA
Trigger: AGCTATAAAAGCCATGTTGCAGCTCCATGAAAGAGG...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTAAAGGAATTGGGACAATaGTTTCAGGATAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLKELGQ*FQDRAD
Trigger: GTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTT...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp TTTGGGCATTATATAAACTTTTACAGGCTTGCTGAAGGGAATGGTGCCCTCGATACATCAAGAAGGAGATaGCTTTCTCTTCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FGHYINFYRLAEGNGALDTSRRR*LSLPVS
Trigger: GGAAACAGGAAGAGAAAGGCATCTCCTTCTTGATGT...ATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR GCA 90 bp TTTGGGCATTATATAAACTTTTACAGGCTTGCTGAAGGGAATGGTGCCCTCGATTTCCACAACTTTTCCTaGAAGGCCTTGATGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FGHYINFYRLAEGNGALDFHNFS*KALMRS
Trigger: ACTTCTCATCAAGGCCTTGCAGGAAAAGTTGTGGAA...ATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR GCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTTTGCCTTAGCGCCGTaGAGGTTTGGGCATTATATA +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINFALAP*RFGHYI
Trigger: TATATAATGCCCAAACCTGCACGGCGCTAAGGCAAA...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTATATCTGTCAGATGCTTaGAGGCCACATCAACTAATC +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLYLSDA*RPHQLI
Trigger: GATTAGTTGATGTGGCCTGCAAGCATCTGACAGATA...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534064.6
CDS-3UTR CCA 90 bp ATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCTCGACAGGCTTCCTaGCAAACTGGAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: MASSIMQSGENPAVFDNKPRQAS*QTGASI
Trigger: AATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGG...TTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCTTCAGTCCTCTTTCATaGAGCTGCAACATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSFSPLS*SCNMAF
Trigger: AAAAGCCATGTTGCAGCTCCATGAAAGAGGACTGAA...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
3UTR CAA 72 bp GAGCTAGGACTTGATGAGATTTCATTCTGCAGGATGTaGATGGCATCATCCATAATGCAGTCTGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: ELGLDEISFCRM*MASSIMQSGEN
Trigger: ATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAATCTCATCAAGTCCTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR TCA 90 bp GTCCTCAGTTACCAGTTTAGGATGGATCTGAATAGATTTTATACTCTTACCTTGGCTGAACCACTTTCGTaGATTCCTCATAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: VLSYQFRMDLNRFYTLTLAEPLS*IPHKPA
Trigger: AGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGC...CAAGGTAAGAGTATAAAATCTATTCAGATCCATCCTAAACTGGTAACTGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR TCA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCGGAAAATAGATCACTaGGAGATCGAAAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWRKIDH*EIENFL
Trigger: CAAGAAGTTTTCGATCTCTCAGTGATCTATTTTCCG...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp TCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTCAGATCTATGTGGAGTaGTGCAGATTTACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SFCRMLMASSIMQSGENPQIYVE*CRFTWF
Trigger: AAACCAAGTAAATCTGCAGCACTCCACATAGATCTG...AGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR GCA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCAGATCTATGTGGAGTaGTGCAGATTTACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWQIYVE*CRFTWF
Trigger: AAACCAAGTAAATCTGCAGCACTCCACATAGATCTG...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp GATGAGATTTCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGTCTGGTCAGATCTATGTGGAGTaGTGCAGATTTACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: DEISFCRMLMASSIMQSGQIYVE*CRFTWF
Trigger: AAACCAAGTAAATCTGCAGCACTCCACATAGATCTG...ACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAATCTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR GCA 90 bp AATGATGCAATTTTCAGTCTCACAGATGGATCATTCTCGTCTGTAATCCCAATCGTATTGCAAAGCATCTaGTGGGGAGGTAGCTTTACA +
Preference number: 4 (lower is better)
Translates to: NDAIFSLTDGSFSSVIPIVLQSI*WGGSFT
Trigger: TGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATAC...GATTGGGATTACAGACGAGAATGATCCATCTGTGAGACTGAAAATTGCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR GCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTAGAAATCAGCTACTCCTaGCAATTCAGATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLEISYS*QFRLKF
Trigger: GAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTC...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR GCA 90 bp ATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACAGGGTTCTAGGGGTTaGTGTGTATACACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: MASSIMQSGENPAVFDNKQGSRG*CVYTKR
Trigger: CCTCTTTGTGTATACACAGCAACCCCTAGAACCCTG...TTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp ATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAATTGCAAAGCATCTGCTaGGGAGGTAGCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: MASSIMQSGENPAVFDNKLQSIC*GGSFTQ
Trigger: CTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAA...TTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp GCTGTCTTTGATAATAAACCCAACAATGATGCAATTTTCAGTCTCACAGATGGAGGCTTCCTGGCAAACTaGAGCAAGTATTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: AVFDNKPNNDAIFSLTDGGFLAN*SKYCKA
Trigger: TGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCC...TCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATTATCAAAGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCAGCGCCGTGCAGGTTTaGGCATTATATAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSSAVQV*ALYKLL
Trigger: TAAAAGTTTATATAATGCCCAAACCTGCACGGCGCT...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR TCA 90 bp ATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACAATGATGCTGAACCACTTTCGTaGATTCCTCATAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: IMQSGENPAVFDNKPNNDAEPLS*IPHKPA
Trigger: AGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGC...ATCATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR TCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTTATTTCTTACACCATaGGACGTATCTGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINLFLTP*DVSVRC
Trigger: GCATCTGACAGATACGTCTCATGGTGTAAGAAATAA...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534064.6
CDS-3UTR GCA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGATCTATGTGGAGTGCTaGAGATTTACTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWIYVEC*RFTWFC
Trigger: ACAAAACCAAGTAAATCTGCAGCACTCCACATAGAT...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp TCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTATCTATGTGGAGTGCTaGAGATTTACTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SFCRMLMASSIMQSGENPIYVEC*RFTWFC
Trigger: ACAAAACCAAGTAAATCTGCAGCACTCCACATAGAT...AGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR GCA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATCAGATCTATGTGGAGTaGTGCAGATTTACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LIPDETVRVTYSLSLHINQIYVE*CRFTWF
Trigger: AAACCAAGTAAATCTGCAGCACTCCACATAGATCTG...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR GCA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTAAGATTGCCAAGTAACTaGAGGCACTTATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLRLPSN*RHLFLT
Trigger: TGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCT...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp ATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAAAGCAATTTCCTCCTGTaGCTGAACCACTTTCGTGAA +
Preference number: 4 (lower is better)
Translates to: MASSIMQSGENPAVFDNKSNFLL*LNHFRE
Trigger: TTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCT...TTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCTTACACAGATCTATGTaGAGTGCTGCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: IPDETVRVTYSLSLHINSLHRSM*SAADLL
Trigger: AAGTAAATCTGCAGCACTCCACATAGATCTGTGTAA...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CCA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACTTTCAGTCTCACAGATaGATCATTCTCCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHFQSHR*IILLVI
Trigger: TATTACAAGGAGAATGATCCATCTGTGAGACTGAAA...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR TCA 90 bp GATGCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGACGGAAAATAGATCACTaGGAGATCGAAAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: DAIFSLTDGSFSENRSLRRKIDH*EIENFL
Trigger: CAAGAAGTTTTCGATCTCTCAGTGATCTATTTTCCG...TCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524766.5
CDS-3UTR TCA 90 bp ATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACAATGATCGCATTTGGATAGCTTaGTTCTCTGGTAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: IMQSGENPAVFDNKPNNDRIWIA*FSGSLV
Trigger: CACTAAGCTACCAGAGAATCAAGCTATCCAAATGCG...ATCATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp ATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACAATGATAGCAATTTCCTCCTGTaGCTGAACCACTTTCGTGAA +
Preference number: 4 (lower is better)
Translates to: IMQSGENPAVFDNKPNNDSNFLL*LNHFRE
Trigger: TTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCT...ATCATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CCA 90 bp AAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCCACAATTACACAGATCTATGTaGAGTGCTGCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: KEVEVDWGRGKMKQVWPQLHRSM*SAADLL
Trigger: AAGTAAATCTGCAGCACTCCACATAGATCTGTGTAA...TTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR GCA 90 bp GATGCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGAATCTATGTGGAGTGCTaGAGATTTACTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: DAIFSLTDGSFSENRSLRIYVEC*RFTWFC
Trigger: ACAAAACCAAGTAAATCTGCAGCACTCCACATAGAT...TCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524766.5
CDS-3UTR CCA 90 bp TCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACTTACACAGATCTATGTaGAGTGCTGCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: SSIMQSGENPAVFDNKPNLHRSM*SAADLL
Trigger: AAGTAAATCTGCAGCACTCCACATAGATCTGTGTAA...GTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
3UTR CAA 72 bp TTTAGGATGGATCTGAATAGATTTTATACTCTTACCTaGCAGGCCACATCAACTAATCGCATTTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: FRMDLNRFYTLT*QATSTNRIWIA
Trigger: AGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGGTAAGAGTATAAAATCTATTCAGATCCATCCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR TCA 90 bp GTCTTTGATAATAAACCCAACAATGATGCAATTTTCAGTCTCACAGATGGATCAATAACGGTACTTACTTaGAGGATTGTGAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: VFDNKPNNDAIFSLTDGSITVLT*RIVRTK
Trigger: TTTGGTCCTCACAATCCTTCAAGTAAGTACCGTTAT...TGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATTATCAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR GCA 90 bp ATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAATCAAGTAATCTTTCCTaGATCTCTGAGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: MASSIMQSGENPAVFDNKSSNLS*ISEIAF
Trigger: GAAAGCTATCTCAGAGATGCAGGAAAGATTACTTGA...TTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp ATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAATTTCAGTCTCACAGATaGATCATTCTCGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: MASSIMQSGENPAVFDNKFQSHR*IILVCN
Trigger: ATTACAGACGAGAATGATCCATCTGTGAGACTGAAA...TTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CCA 90 bp GTCTTTGATAATAAACCCAACAATGATGCAATTTTCAGTCTCACAGATGGATCATTACACAGATCTATGTaGAGTGCTGCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: VFDNKPNNDAIFSLTDGSLHRSM*SAADLL
Trigger: AAGTAAATCTGCAGCACTCCACATAGATCTGTGTAA...TGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATTATCAAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CAA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTCCATCCAGGGGCATTTaGGAATGCGAGCACTGGAGT +
Preference number: 5 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCPSRGI*ECEHWS
Trigger: ACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGG...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CAA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAATCCAAAGAGCCAAGATaGCCAAGTAACTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QAWLILTPKKGPLGHGWESKEPR*PSNCRH
Trigger: GTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGA...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS CCA 90 bp ACTACTCCCTCTACGCTTTCCGCCTCGACAGGCTTCCTGGCAAACTaGAGCAAGTATTGCAAAGCATCTGCTGGGGAGGTAGCTTTACAC +
Preference number: 5 (lower is better)
Translates to: TTPSTLSASTGFLAN*SKYCKASAGEVALH
Trigger: GTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS-3UTR CAA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCCCATCCAGGGGCATTTaGGAATGCGAGCACTGGAGT +
Preference number: 5 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCPSRGI*ECEHWS
Trigger: ACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGG...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CAA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCCCCTCTAGGCCACGGTaGGGAAGACTGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCPSRPR*GRLFLP
Trigger: AGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGG...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CAA 90 bp CAGTCTCACAGATGGATCATTCTCGTCTGTAATCCCAATCCTTTGGGAGGGCCAGGCCAAGCAGGAGGGTaGCTTGAGCTCAGGAATTCG +
Preference number: 5 (lower is better)
Translates to: QSHRWIILVCNPNPLGGPGQAGG*LELRNS
Trigger: CGAATTCCTGAGCTCAAGCAACCCTCCTGCTTGGCC...TGGCCCTCCCAAAGGATTGGGATTACAGACGAGAATGATCCATCTGTGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CAA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAACAGTTAGATCTGAATaGTTAAGCAGAGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QAWLILTPKKGPLGHGWETVRSE*LSRGCL
Trigger: CAAGCAGCCTCTGCTTAACAATTCAGATCTAACTGT...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CAA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCAAACTGGAGCAAGTATaGCAAAGCATCTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCKLEQV*QSICWG
Trigger: TCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTT...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CAA 90 bp ACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTAAGAAGCCCTCTAGGCCACGGTaGGGAAGACTGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: TSIPGEVLQAWLILTPKKPSRPR*GRLFLP
Trigger: AGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGG...CTTCTTAGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS TCA 90 bp ACACAGAGAGACTCCATCTCTTGTAATAATGTTCCAAGAGAATCCTaGCTACTCCCTCTACGCTTTCCGCCTCGACAGGCTTCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: TQRDSISCNNVPRES*LLPLRFPPRQASWQ
Trigger: TTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGGATTCTCTTGGAACATTATTACAAGAGATGGAGTCTCTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524766.5
ENST00000527522.1
ENST00000534408.5
CDS CCA 90 bp GACAGGCTTCCTGGCAAACTGGAGCAAGTATTGCAAAGCATCTGCTaGGGAGGTAGCTTTACACAGATCTATGTGGAGTGCTGCAGATTT +
Preference number: 5 (lower is better)
Translates to: DRLPGKLEQVLQSIC*GGSFTQIYVECCRF
Trigger: AAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS-3UTR CAA 90 bp GGGAAGACTGTTTTTGCCTTAGCGCCGTGCAGGTTTGGGCATTATATAAACTTTCCCTCTAGGCCACGGTaGGGAAGACTGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: GKTVFALAPCRFGHYINFPSRPR*GRLFLP
Trigger: AGGCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGG...AAAGTTTATATAATGCCCAAACCTGCACGGCGCTAAGGCAAAAACAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CAA 90 bp CAGGCTTGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAACAATTTATCCTGTGTTaGATACCAGATGAGACTGTA +
Preference number: 5 (lower is better)
Translates to: QAWLILTPKKGPLGHGWEQFILC*IPDETV
Trigger: TACAGTCTCATCTGGTATCAAACACAGGATAAATTG...TTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CAA 90 bp GAGGGTAAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGGGCCAAGCAGGAGGGTaGCTTGAGCTCAGGAATTCG +
Preference number: 5 (lower is better)
Translates to: EGKEVEVDWGRGKMKQVWGQAGG*LELRNS
Trigger: CGAATTCCTGAGCTCAAGCAACCCTCCTGCTTGGCC...CCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTTACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CAA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCTCATTCTGCAGGATGTaGATGGCATCATCCATAATG +
Preference number: 5 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCSFCRM*MASSIM
Trigger: CATTATGGATGATGCCATCAACATCCTGCAGAATGA...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CAA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCCCATCCAGGGGCATTTaGGAATGCGAGCACTGGAGT +
Preference number: 5 (lower is better)
Translates to: IPDETVRVTYSLSLHINSPSRGI*ECEHWS
Trigger: ACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGG...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CAA 90 bp TGGCTCATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTCAATTTATCCTGTGTTaGATACCAGATGAGACTGTA +
Preference number: 5 (lower is better)
Translates to: WLILTPKKGPLGHGWEDCQFILC*IPDETV
Trigger: TACAGTCTCATCTGGTATCAAACACAGGATAAATTG...ACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAATGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CAA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTTGTAATCCCAATCCTTaGGGAGGGCCAAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTCNPNP*GGPSRR
Trigger: CCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTACA...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CAA 90 bp GCCTACACATCAATTCCAGGTGAAGTGCTTCAGGCTTGGCTCATTCTGACACCTGTGCTGCAGATTTACTaGGTTTTGTTAGTCGGAGTT +
Preference number: 5 (lower is better)
Translates to: AYTSIPGEVLQAWLILTPVLQIY*VLLVGV
Trigger: AACTCCGACTAACAAAACCAAGTAAATCTGCAGCAC...AGGTGTCAGAATGAGCCAAGCCTGAAGCACTTCACCTGGAATTGATGTGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CAA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCTCTGACACGTGGGTCTaGGTCACTGAAGTAATCCCC +
Preference number: 5 (lower is better)
Translates to: IPDETVRVTYSLSLHINSSDTWV*VTEVIP
Trigger: GGGGATTACTTCAGTGACCAAGACCCACGTGTCAGA...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CAA 90 bp CTGGCAGCTAGGCCTTCTGCATCTTTTGTGACACTTTTCTCCAAAGAGCCAAGATTAAGCAGAGGCTGCTaGATGCAGAAGATGAAGACA +
Preference number: 5 (lower is better)
Translates to: LAARPSASFVTLFSKEPRLSRGC*MQKMKT
Trigger: TGTCTTCATCTTCTGCATCAAGCAGCCTCTGCTTAA...TCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CAA 90 bp GATGCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGAGGCCAAGCAGGAGGGTaGCTTGAGCTCAGGAATTCG +
Preference number: 5 (lower is better)
Translates to: DAIFSLTDGSFSENRSLRGQAGG*LELRNS
Trigger: CGAATTCCTGAGCTCAAGCAACCCTCCTGCTTGGCC...TCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524766.5
CDS TCA 90 bp GTCAGATGCTTGCAGGCCACATCAACTAATCGCATTTGGATAGCTTaGTTCTCTGGTAGCTTAGTGCCAATTGCAAGCAAAGTATCCAGC +
Preference number: 5 (lower is better)
Translates to: VRCLQATSTNRIWIA*FSGSLVPIASKVSS
Trigger: GCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGCATCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529807.5
ENST00000534064.6
CDS-3UTR CAA 90 bp TTTGGGCATTATATAAACTTTTACAGGCTTGCTGAAGGGAATGGTGCCCTCGATTCCAAAGAGCCAAGATaGCCAAGTAACTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: FGHYINFYRLAEGNGALDSKEPR*PSNCRH
Trigger: GTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGA...ATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS-3UTR CAA 90 bp ATTCTGACACCTAAGAAGGGCCCTCTAGGCCACGGTTGGGAAGACTGTTTTTGCCAATTTATCCTGTGTTaGATACCAGATGAGACTGTA +
Preference number: 5 (lower is better)
Translates to: ILTPKKGPLGHGWEDCFCQFILC*IPDETV
Trigger: TACAGTCTCATCTGGTATCAAACACAGGATAAATTG...GCAAAAACAGTCTTCCCAACCGTGGCCTAGAGGGCCCTTCTTAGGTGTCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000534064.6
ENST00000535943.1
CDS-3UTR CAA 90 bp GATGCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGATGTAATCCCAATCCTTaGGGAGGGCCAAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: DAIFSLTDGSFSENRSLRCNPNP*GGPSRR
Trigger: CCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTACA...TCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524766.5
CDS-3UTR CAA 90 bp ATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATTCCAAACTGGAGCAAGTATaGCAAAGCATCTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: IPDETVRVTYSLSLHINSKLEQV*QSICWG
Trigger: TCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTT...GGAATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CAA 90 bp AAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCCACAAAAACTGGAGCAAGTATaGCAAAGCATCTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KEVEVDWGRGKMKQVWPQKLEQV*QSICWG
Trigger: TCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTT...TTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CAA 90 bp CTAGGACTTGATGAGATTTCATTCTGCAGGATGTTGATGGCATCATCCATAATGAAACTGGAGCAAGTATaGCAAAGCATCTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LGLDEISFCRMLMASSIMKLEQV*QSICWG
Trigger: TCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTT...CATTATGGATGATGCCATCAACATCCTGCAGAATGAAATCTCATCAAGTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CAA 90 bp CTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACTCATTCTGCAGGATGTaGATGGCATCATCCATAATG +
Preference number: 5 (lower is better)
Translates to: LCLIPDETVRVTYSLSLHSFCRM*MASSIM
Trigger: CATTATGGATGATGCCATCAACATCCTGCAGAATGA...GTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CAA 90 bp ATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACAATGATTGTAATCCCAATCCTTaGGGAGGGCCAAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: IMQSGENPAVFDNKPNNDCNPNP*GGPSRR
Trigger: CCTCCTGCTTGGCCCTCCCAAAGGATTGGGATTACA...ATCATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CAA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTAGTATCTGTCAGATGCTaGCAGGCCACATCAACTAAT +
Preference number: 5 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLVSVRC*QATSTN
Trigger: ATTAGTTGATGTGGCCTGCAAGCATCTGACAGATAC...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534064.6
CDS-3UTR CAA 90 bp ATCCTGTGTTTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTAAAGTTCTCCAAGTCTTaGCAGATCCCTGATGGTGAA +
Preference number: 5 (lower is better)
Translates to: ILCLIPDETVRVTYSLSLKFSKS*QIPDGE
Trigger: TTCACCATCAGGGATCTGCAAAGACTTGGAGAACTT...TAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAAACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534064.6
CDS CCA 90 bp TATTGCAAAGCATCTGCTGGGGAGGTAGCTTTACACAGATCTATGTaGAGTGCTGCAGATTTACTTGGTTTTGTTAGTCGGAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: YCKASAGEVALHRSM*SAADLLGFVSRSFL
Trigger: TAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS-3UTR CAA 90 bp GATGAGATTTCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGTCTGGTGTGCTGCAGATTTACTaGGTTTTGTTAGTCGGAGTT +
Preference number: 5 (lower is better)
Translates to: DEISFCRMLMASSIMQSGVLQIY*VLLVGV
Trigger: AACTCCGACTAACAAAACCAAGTAAATCTGCAGCAC...ACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAATCTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS-3UTR CAA 90 bp GCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGAGATAAACTGGAGCAAGTATaGCAAAGCATCTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: AIFSLTDGSFSENRSLRDKLEQV*QSICWG
Trigger: TCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTT...ATCTCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524766.5
CDS-3UTR CAA 90 bp TCATTCTGCAGGATGTTGATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTTCATTCTGCAGGATGTaGATGGCATCATCCATAATG +
Preference number: 5 (lower is better)
Translates to: SFCRMLMASSIMQSGENPSFCRM*MASSIM
Trigger: CATTATGGATGATGCCATCAACATCCTGCAGAATGA...AGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CAA 90 bp AACCCAAGTTCAAATCCATACCTTCCATTTACTAGCTGGGTGACCTTGGATACTACAGAAATCCTGATTTaGGTCAGATGTGGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: NPSSNPYLPFTSWVTLDTTEILI*VRCGSS
Trigger: TGAGCTACCACATCTGACCAAAATCAGGATTTCTGT...AGTATCCAAGGTCACCCAGCTAGTAAATGGAAGGTATGGATTTGAACTTGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CAA 90 bp TTGATACCAGATGAGACTGTAAGGGTCACATACTCCTTAAGCCTACACATCAATGTGCTGCAGATTTACTaGGTTTTGTTAGTCGGAGTT +
Preference number: 5 (lower is better)
Translates to: LIPDETVRVTYSLSLHINVLQIY*VLLVGV
Trigger: AACTCCGACTAACAAAACCAAGTAAATCTGCAGCAC...ATTGATGTGTAGGCTTAAGGAGTATGTGACCCTTACAGTCTCATCTGGTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433818.6
ENST00000534064.6
CDS-3UTR CAA 90 bp AAAGAAGTAGAAGTGGATTGGGGAAGAGGGAAAATGAAACAAGTTTGGCCACAAGTGCTGCAGATTTACTaGGTTTTGTTAGTCGGAGTT +
Preference number: 5 (lower is better)
Translates to: KEVEVDWGRGKMKQVWPQVLQIY*VLLVGV
Trigger: AACTCCGACTAACAAAACCAAGTAAATCTGCAGCAC...TTGTGGCCAAACTTGTTTCATTTTCCCTCTTCCCCAATCCACTTCTACTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527522.1
CDS-3UTR CAA 90 bp GATGCAATTTTCAGTCTCACAGATGGATCATTCTCGGAAAATAGATCACTGAGATCATTCTGCAGGATGTaGATGGCATCATCCATAATG +
Preference number: 5 (lower is better)
Translates to: DAIFSLTDGSFSENRSLRSFCRM*MASSIM
Trigger: CATTATGGATGATGCCATCAACATCCTGCAGAATGA...TCTCAGTGATCTATTTTCCGAGAATGATCCATCTGTGAGACTGAAAATTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524766.5
CDS-3UTR CAA 90 bp GTCTTTGATAATAAACCCAACAATGATGCAATTTTCAGTCTCACAGATGGATCAGTGCTGCAGATTTACTaGGTTTTGTTAGTCGGAGTT +
Preference number: 5 (lower is better)
Translates to: VFDNKPNNDAIFSLTDGSVLQIY*VLLVGV
Trigger: AACTCCGACTAACAAAACCAAGTAAATCTGCAGCAC...TGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATTATCAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524766.5
ENST00000534408.5
CDS-3UTR CAA 90 bp TCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACTTTTATACTCTTACCTaGCAGGCCACATCAACTAAT +
Preference number: 5 (lower is better)
Translates to: SSIMQSGENPAVFDNKPNFYTLT*QATSTN
Trigger: ATTAGTTGATGTGGCCTGCAAGGTAAGAGTATAAAA...GTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534408.5
CDS CCA 72 bp TCTACGCTTTCCGCCTCGACAGGCTTCCTGGCAAACTaGAGCAAGTATTGCAAAGCATCTGCTGGGGAGGTA +
Preference number: 6 (lower is better)
Translates to: STLSASTGFLAN*SKYCKASAGEV
Trigger: TACCTCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS CCA 72 bp CTACTCCCTCTACGCTTTCCGCCTCGACAGGCTTCCTaGCAAACTGGAGCAAGTATTGCAAAGCATCTGCTG +
Preference number: 6 (lower is better)
Translates to: LLPLRFPPRQAS*QTGASIAKHLL
Trigger: CAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS CAA 72 bp CGCCTCGACAGGCTTCCTGGCAAACTGGAGCAAGTATaGCAAAGCATCTGCTGGGGAGGTAGCTTTACACAG +
Preference number: 6 (lower is better)
Translates to: RLDRLPGKLEQV*QSICWGGSFTQ
Trigger: CTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS CAA 90 bp TACGCTTTCCGCCTCGACAGGCTTCCTGGCAAACTGGAGCAAGTATaGCAAAGCATCTGCTGGGGAGGTAGCTTTACACAGATCTATGTG +
Preference number: 6 (lower is better)
Translates to: YAFRLDRLPGKLEQV*QSICWGGSFTQIYV
Trigger: CACATAGATCTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS CCA 72 bp CCTGGCAAACTGGAGCAAGTATTGCAAAGCATCTGCTaGGGAGGTAGCTTTACACAGATCTATGTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: PGKLEQVLQSIC*GGSFTQIYVEC
Trigger: GCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS TCA 72 bp GACTCCATCTCTTGTAATAATGTTCCAAGAGAATCCTaGCTACTCCCTCTACGCTTTCCGCCTCGACAGGCT +
Preference number: 6 (lower is better)
Translates to: DSISCNNVPRES*LLPLRFPPRQA
Trigger: AGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGGATTCTCTTGGAACATTATTACAAGAGATGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524766.5
ENST00000527522.1
ENST00000534408.5
CDS CAA 90 bp GCGAAGATAGGTGGCAGAGAAATCAGCTACTCCTGCCAATTCAGATaGAAGTTCTCCAAGTCTTTGCAGATCCCTGATGGTGAATTCCAG +
Preference number: 6 (lower is better)
Translates to: AKIGGREISYSCQFR*KFSKSLQIPDGEFQ
Trigger: CTGGAATTCACCATCAGGGATCTGCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTCTCTGCCACCTATCTTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533180.1
ENST00000534064.6
CDS TCA 72 bp GTGGCAGAGAAATCAGCTACTCCTGCCAATTCAGATTaGAGTTCTCCAAGTCTTTGCAGATCCCTGATGGTG +
Preference number: 6 (lower is better)
Translates to: VAEKSATPANSD*SSPSLCRSLMV
Trigger: CACCATCAGGGATCTGCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTCTCTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533180.1
ENST00000534064.6
CDS CCA 72 bp GCATCTGCTGGGGAGGTAGCTTTACACAGATCTATGTaGAGTGCTGCAGATTTACTTGGTTTTGTTAGTCGG +
Preference number: 6 (lower is better)
Translates to: ASAGEVALHRSM*SAADLLGFVSR
Trigger: CCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAGCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433818.6
ENST00000524766.5
ENST00000527522.1
ENST00000529807.5
ENST00000534064.6
ENST00000534408.5
CDS CAA 72 bp GGTGGCAGAGAAATCAGCTACTCCTGCCAATTCAGATaGAAGTTCTCCAAGTCTTTGCAGATCCCTGATGGT +
Preference number: 6 (lower is better)
Translates to: GGREISYSCQFR*KFSKSLQIPDG
Trigger: ACCATCAGGGATCTGCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTCTCTGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533180.1
ENST00000534064.6
CDS TCA 72 bp TTGCCAAGTAACTGCAGGCACTTATTTCTTACACCATaGGACGTATCTGTCAGATGCTTGCAGGCCACATCA +
Preference number: 6 (lower is better)
Translates to: LPSNCRHLFLTP*DVSVRCLQATS
Trigger: TGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTTACTTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529807.5
ENST00000534064.6
CDS TCA 72 bp TTGCCAAGTAACTGCAGGCACTTATTTCTTACACCATaGGACGTATCTGTCAGATGTTTCATTCTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: LPSNCRHLFLTP*DVSVRCFILQD
Trigger: ATCCTGCAGAATGAAACATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTTACTTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS CAA 72 bp GAGACGTATCTGTCAGATGTTTCATTCTGCAGGATGTaGATGGCATCATCCATAATGCAGTCTGGTGAAAAT +
Preference number: 6 (lower is better)
Translates to: ETYLSDVSFCRM*MASSIMQSGEN
Trigger: ATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAACATCTGACAGATACGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433818.6
CDS CAA 72 bp GCATCTTTTGTGACACTTTTCTCCAAAGAGCCAAGATaGCCAAGTAACTGCAGGCACTTATTTCTTACACCA +
Preference number: 6 (lower is better)
Translates to: ASFVTLFSKEPR*PSNCRHLFLTP
Trigger: TGGTGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433818.6
ENST00000529807.5
ENST00000534064.6
CDS TCA 72 bp CCTTTGAAAAGTACTAGGAACTGGAATCAGAAAACCTaGACTGGAATTGGAAATTCTCAACCATATACTTTT +
Preference number: 6 (lower is better)
Translates to: PLKSTRNWNQKT*TGIGNSQPYTF
Trigger: AAAAGTATATGGTTGAGAATTTCCAATTCCAGTTCAGGTTTTCTGATTCCAGTTCCTAGTACTTTTCAAAGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531059.1