RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INTS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000143624, ENSG00000262826

Ensembl transcript IDs: ENST00000318967.7, ENST00000368669.1, ENST00000368670.5, ENST00000435409.6, ENST00000476843.5, ENST00000480659.1, ENST00000481797.5, ENST00000491790.1, ENST00000503133.5, ENST00000512605.4, ENST00000571768.5, ENST00000571829.1, ENST00000573844.5, ENST00000574879.1, ENST00000575708.5, ENST00000575774.5, ENST00000575952.5, ENST00000576030.5, ENST00000576422.4, ENST00000576641.1, ENST00000623139.1, ENST00000624515.1

Found 1960 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCACCAGTGCCGCAGGATGCTGGTGGTGAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGC +
Preference number: 1 (lower is better)
Translates to: MHQCRRMLVVNWSSG*QGRLSTIFTISSLG
Trigger: GCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCACCACCAGCATCCTGCGGCACTGGTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR TCA 90 bp CATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTTCCCTGCGGCGGCTTTGCTGGCCCT +
Preference number: 1 (lower is better)
Translates to: HQAGVQIAQLGSLGK*LVQVHLPCGGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR TCA 90 bp GCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCA +
Preference number: 1 (lower is better)
Translates to: AARHVSCTSAAGCWW*TGRQDGRAGSAPSS
Trigger: TGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCACCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 90 bp GACTTGATGTGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTGAACTGGTCGTCAGGATGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: DLMCSASSSSCFMHQ*RRMLVVNWSSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCACATCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 90 bp ACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTAGCCTGGGCAAATGACTCGTACAGG +
Preference number: 1 (lower is better)
Translates to: TSSSWQAFMSIIRQV*RSPSWVAWANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 90 bp GTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCCAGCTTGCTGCTAGAGCTCCTCAGG +
Preference number: 1 (lower is better)
Translates to: VLVRLSRRLSKCSRI*SRVSWASLLLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 90 bp GGGTGGGATGGGGAATGCAGGGCCTCAGTCACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGT +
Preference number: 1 (lower is better)
Translates to: GWDGECRASVTVRAH*RGPFSFPLGRLRFR
Trigger: ACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGAGGCCCTGCATTCCCCATCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp GAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTaGGGCTGTGGCCACCCTTTCAGACTCCTTTCTGAATGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: EVPTSDQPKPPGHTT*GCGHPFRLLSECLW
Trigger: CCACAAGCATTCAGAAAGGAGTCTGAAAGGGTGGCCACAGCCCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
3UTR CCA 90 bp TCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATC +
Preference number: 1 (lower is better)
Translates to: SSCFMHQCRRMLVVN*SSGWQGRLSTIFTI
Trigger: GATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCACCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp TCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAG +
Preference number: 1 (lower is better)
Translates to: STSRAGQSCFSPALG*LGGRVLIFLRQGEE
Trigger: CTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp TTAACCTTTGAATCACCAAGAAGGAGAGGGCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCCTCAGTCACTGTCAGAGCCCACTGC +
Preference number: 1 (lower is better)
Translates to: LTFESPRRRGQSSRG*DGECRASVTVRAHC
Trigger: GCAGTGGGCTCTGACAGTGACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTGCCCTCTCCTTCTTGGTGATTCAAAGGTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR GCA 90 bp CTCTTGCGAGGCAGGCTGTTGTTCTTGATGAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGG +
Preference number: 1 (lower is better)
Translates to: LLRGRLLFLMSRDLM*SASSSSCFMHQCRR
Trigger: CCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTaGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGC +
Preference number: 1 (lower is better)
Translates to: WTAGEQQHSQGTLLC*FTWPSKWPHCGRKS
Trigger: GCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 90 bp ATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGGTTCATCTTCCCTGCGGCGGCTTTG +
Preference number: 1 (lower is better)
Translates to: MSIIRQVCRSPSWVA*ANDSYRFIFPAAAL
Trigger: CAAAGCCGCCGCAGGGAAGATGAACCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp CAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGACTCGTACAGGTTCATCTTCCCTGCG +
Preference number: 1 (lower is better)
Translates to: QAFMSIIRQVCRSPS*VAWANDSYRFIFPA
Trigger: CGCAGGGAAGATGAACCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp TTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCAC +
Preference number: 1 (lower is better)
Translates to: FEGWTELLFAGSWVA*WKSPHIPPPGRRDH
Trigger: GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp TCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGA +
Preference number: 1 (lower is better)
Translates to: SFDFEGWTELLFAGS*VAWWKSPHIPPPGR
Trigger: TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp CTTCCTCTTCTGAAGCACTGCTGGAGCCCGACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAG +
Preference number: 1 (lower is better)
Translates to: LPLLKHCWSPTLLRH*GAVWHSFDFEGWTE
Trigger: CTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp TGCAGTTCGCCCAAACTTCACTCCTCAGTCCACCTCCATTCTCCCTaGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: CSSPKLHSSVHLHSP*TAGEQQHSQGTLLC
Trigger: GCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCAGGGAGAATGGAGGTGGACTGAGGAGTGAAGTTTGGGCGAACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
3UTR TCA 90 bp CCGAGTCAAAGTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTGGA +
Preference number: 1 (lower is better)
Translates to: PSQSLPPGPGPQFPA*PHTGPPYHSPSVAG
Trigger: TCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGACTTTGACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 90 bp TGCTCCGAGTCAAAGTCTTCCTCCAGGACCTGGTCCACAATTTCCTaGATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGC +
Preference number: 1 (lower is better)
Translates to: CSESKSSSRTWSTIS*MTSHWASVSLPFCS
Trigger: GCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGACTTTGACTCGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 90 bp AAGTTCTGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTTGCTGCTA +
Preference number: 1 (lower is better)
Translates to: KFCLVLVRLSRRLSK*SRICSRVSWASLLL
Trigger: TAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp CATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTaGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTGGTAT +
Preference number: 1 (lower is better)
Translates to: HSQGTLLCWFTWPSK*PHCGRKSISVPPWY
Trigger: ATACCAGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 90 bp GGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATaGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTC +
Preference number: 1 (lower is better)
Translates to: GEQQHSQGTLLCWFT*PSKWPHCGRKSISV
Trigger: GACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTaGTTCACATGGCCCAGCAAGTGGCCACACTTTGAATCACCAAGA +
Preference number: 1 (lower is better)
Translates to: WTAGEQQHSQGTLLC*FTWPSKWPHFESPR
Trigger: TCTTGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
3UTR CCA 90 bp AGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTaGTATCCAGACTTTATCTCCAGGTACAGTTGTCCCTGGAGACCA +
Preference number: 1 (lower is better)
Translates to: SKWPHCGRKSISVPP*YPDFISRYSCPWRP
Trigger: TGGTCTCCAGGGACAACTGTACCTGGAGATAAAGTCTGGATACCAGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 90 bp AACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTaGAAGGAAGAGCATCTCTGTCCCTCCCTGGTATCCAGACTTTAT +
Preference number: 1 (lower is better)
Translates to: NSPLLVHMAQQVATL*KEEHLCPSLVSRLY
Trigger: ATAAAGTCTGGATACCAGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 90 bp CGGCTTTGCTGGCCCTCAGGTAGTAGAGCAGGTGGTAGCCAATCTTaGGCTGCTTCTGATATAGCTCGGAGAGAAGGTCTAGAAGTAGAG +
Preference number: 1 (lower is better)
Translates to: RLCWPSGSRAGGSQS*AASDIARREGLEVE
Trigger: CTCTACTTCTAGACCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACTACCTGAGGGCCAGCAAAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp TTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAGGCACAATACTGCTCAAAGGTCTCC +
Preference number: 1 (lower is better)
Translates to: LRCCRMGIMVSRGIL*ARKSCQAQYCSKVS
Trigger: GGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp CCTCAGGGACTCATCCAACTGGTCAAGGTAAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTC +
Preference number: 1 (lower is better)
Translates to: PQGLIQLVKVRGDIN*LLHNCLLDRVEAKL
Trigger: GAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCTTACCTTGACCAGTTGGATGAGTCCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 90 bp CAGGGGGCTGAGGACTTCCACTATGGTCTGATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTGAG +
Preference number: 1 (lower is better)
Translates to: QGAEDFHYGLILQSL*LQSDPKYHWEQQCE
Trigger: CTCACACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGTCCTCAGCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR CCA 90 bp GCAGCGAGTCCTCCGGCCATTCTTGGTAGGCACACAGACTTCAACTaGAGGATGACAGACCTTTTGGAAGCATCTTGTTTCTTGAGAAAT +
Preference number: 1 (lower is better)
Translates to: AASPPAILGRHTDFN*RMTDLLEASCFLRN
Trigger: ATTTCTCAAGAAACAAGATGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGGAGGACTCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR TCA 90 bp CTGGAGGATGACAGACCTTTTGGAAGCATCTTGTTTCTTGAGAAATaGGTAAGGACAGGCCTCATCCTACGGGGGATGGTTCTGCATAGA +
Preference number: 1 (lower is better)
Translates to: LEDDRPFGSILFLEK*VRTGLILRGMVLHR
Trigger: TCTATGCAGAACCATCCCCCGTAGGATGAGGCCTGTCCTTACTCATTTCTCAAGAAACAAGATGCTTCCAAAAGGTCTGTCATCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR GCA 90 bp TCCTTTGCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTaGATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTGTC +
Preference number: 1 (lower is better)
Translates to: SFAVEILFIVTEGCL*IVIATLILIRHMVV
Trigger: GACAACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 90 bp CTTCTTTCCTTTGCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATG +
Preference number: 1 (lower is better)
Translates to: LLSFAVEILFIVTEG*LCIVIATLILIRHM
Trigger: CATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR TCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGCAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTCCAGGGCACACCACGTaGGGCTGTGGCCACCCTTTC +
Preference number: 2 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGPGHTT*GCGHPF
Trigger: GAAAGGGTGGCCACAGCCCCACGTGGTGTGCCCTGG...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 2 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 2 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCCCAGGGCACACCACGTaGGGCTGTGGCCACCCTTTC +
Preference number: 2 (lower is better)
Translates to: NQVTHHHVADQLLELCRVPGHTT*GCGHPF
Trigger: GAAAGGGTGGCCACAGCCCCACGTGGTGTGCCCTGG...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 2 (lower is better)
Translates to: LSRRLSKCSRICSRVSWAMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp TTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGGCTCTGTCTCTTGCGAGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LSKCSRICSRVSWAS*LLELLRLCLLRGRL
Trigger: CAGCCTGCCTCGCAAGAGACAGAGCCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLLESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 2 (lower is better)
Translates to: AFMSIIRQVCRSPSWVAWCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...CCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 2 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGATGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 2 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTGTGGCATCTGCCCCATaGTTAGGAATGGACACCCTG +
Preference number: 2 (lower is better)
Translates to: AADCPSAPGSAPESAGPAVASAP*LGMDTL
Trigger: CAGGGTGTCCATTCCTAATCATGGGGCAGATGCCAC...AGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 2 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGACAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 2 (lower is better)
Translates to: FVTARLDMLQRLENWRLASRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: FVTARLDMLQRLENWRLAGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: HGPASGHTVEGRASLSLPGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTGGACTCCCTGGGCTCTaGTGTAGATTGAGGTGCCAA +
Preference number: 2 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPGLPGL*CRLRCQ
Trigger: TTGGCACCTCAATCTACACCAGAGCCCAGGGAGTCC...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 2 (lower is better)
Translates to: FRRLLGGLVEESSYSSARCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 2 (lower is better)
Translates to: LSRRLSKCSRICSRVSWAPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 2 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 2 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 2 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 2 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGSSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp CTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCA +
Preference number: 2 (lower is better)
Translates to: LRGLDRAAFRRLLGG*VEESSYSSAREKRS
Trigger: TGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: FFRLRGLDRAAFRRL*GGLVEESSYSSARE
Trigger: CTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 2 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCGTGGCATCTGCCCCATaGTTAGGAATGGACACCCTG +
Preference number: 2 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGVASAP*LGMDTL
Trigger: CAGGGTGTCCATTCCTAATCATGGGGCAGATGCCAC...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGACACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 2 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: FHLVGFVTARLDMLQRLELESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...CTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: FVTARLDMLQRLENWRLAIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: FRRLLGGLVEESSYSSARDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 2 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAGGCTCCCACCTCCAGTaGCAGCAGGAAGGATGGGTA +
Preference number: 2 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTGSHLQ*QQEGWV
Trigger: TACCCATCCTTCCTGCTGCCACTGGAGGTGGGAGCC...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGGCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: GLCGILSTSRAGQSCFSPTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...CGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: FRRLLGGLVEESSYSSARTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 2 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp CATCTCTGTCCCTCCCTGGTATCCAGACTTTATCTCCAGGTACAGTaGTCCCTGGAGACCAAGCTGGAGCATCCCTCCCGTCAAGCAGCG +
Preference number: 2 (lower is better)
Translates to: HLCPSLVSRLYLQVQ*SLETKLEHPSRQAA
Trigger: CGCTGCTTGACGGGAGGGATGCTCCAGCTTGGTCTCCAGGGACAACTGTACCTGGAGATAAAGTCTGGATACCAGGGAGGGACAGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CAA 90 bp CTAGAGCTCCTCAGGCTCTGTCTCTTGCGAGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATGTGCTCGGCCAGCAGCTCGTCATGT +
Preference number: 2 (lower is better)
Translates to: LELLRLCLLRGRLLF*MSRDLMCSASSSSC
Trigger: ACATGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAGGAGCTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 2 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
3UTR-3UTR TCA 90 bp TTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: LSRRLSKCSRICSRVSWAEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGGGCTCTGGTGTAGATTaGGGTGCCAACCTCAGACCA +
Preference number: 2 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPGSGVD*GANLRP
Trigger: TGGTCTGAGGTTGGCACCTCAATCTACACCAGAGCC...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TGGGGATTATGGTCTCCAGGGGAATATTGTGGGCCAGAAAGAGCTGCCAGGCACCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 2 (lower is better)
Translates to: WGLWSPGEYCGPERAARHPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...GTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 2 (lower is better)
Translates to: FVTARLDMLQRLENWRLAQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 2 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 2 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 2 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRLAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCACCTCCATTCTCCCTaGACAGCGGGGGAACAACAG +
Preference number: 2 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSHLHSP*TAGEQQ
Trigger: CTGTTGTTCCCCCGCTGTCCAGGGAGAATGGAGGTG...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
3UTR-3UTR CCA 90 bp GCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 2 (lower is better)
Translates to: AFMSIIRQVCRSPSWVAWRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...CCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 2 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TGGGGATTATGGTCTCCAGGGGAATATTGTGGGCCAGAAAGAGCTGCCAGGCACCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 2 (lower is better)
Translates to: WGLWSPGEYCGPERAARHPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...GTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 2 (lower is better)
Translates to: NFILWASSQLAWTCCSAWCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGTTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 2 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp CTCTGTCTCTTGCGAGGCAGGCTGTTGTTCTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGC +
Preference number: 2 (lower is better)
Translates to: LCLLRGRLLFLMSRD*MCSASSSSCFMHQC
Trigger: GCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAAGAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 2 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR TCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTGTGGCATCTGCCCCATaGTTAGGAATGGACACCCTG +
Preference number: 2 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSVASAP*LGMDTL
Trigger: CAGGGTGTCCATTCCTAATCATGGGGCAGATGCCAC...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: NQVTHHHVADQLLELCRVGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp ATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGCACATCGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: IWKLCVDGGREVAQEPHIGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...GATGTGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 2 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGAGACTCCTTTCTGAATaGTTGTGGCATCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVRLLSE*LWHLPH
Trigger: ATGGGGCAGATGCCACAAGCATTCAGAAAGGAGTCT...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCAAGGAACTCTCCTCTaGTGGTTCACATGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSQGTLL*WFTWPS
Trigger: GCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTG...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
3UTR-3UTR GCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 2 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GGGCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: GLCGILSTSRAGQSCFSPCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...CGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 2 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 2 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: EGCLCIVIATLILIRHMVQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTTCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 2 (lower is better)
Translates to: SSWSCAESITATIMFSSSSTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 2 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHSTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR CCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTTGCTCTAGACAAAAGTaGGGGCAGAACAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: HGPASGHTVEGRASLSLPCSRQK*GQNRKG
Trigger: TCCCTTCCTGTTCTGCCCCCACTTTTGTCTAGAGCA...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTTGGCAGCAGGAAGGATaGGTAGTGGCCAAAGCCAAG +
Preference number: 2 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSWQQEG*VVAKAK
Trigger: CTTGGCTTTGGCCACTACCCATCCTTCCTGCTGCCA...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTACATGGCCCAGCAAGTaGCCACACTGTGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSTWPSK*PHCGRK
Trigger: CTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATGT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 2 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 2 (lower is better)
Translates to: LSRRLSKCSRICSRVSWARGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 2 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 2 (lower is better)
Translates to: SCAESITATIMFSSSPLLCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: FHLVGFVTARLDMLQRLESRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...CTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 2 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 2 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp CCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTaGAAATGGCTCTTTGGGAGACTGGGGGAGGAGATTGCGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PSLSGQLPLCHFPSL*KWLFGRLGEEIAEG
Trigger: CCCTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR CAA 90 bp CAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTGTCTTCCTCTTCTGAAGCACTGCTG +
Preference number: 2 (lower is better)
Translates to: QSLSEPTAEDPFRFR*VGFGFVSSSSEALL
Trigger: CAGCAGTGCTTCAGAAGAGGAAGACACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TCCTGTAGGCAGGAAGCAAGGACAGACAGCTGCTCCGAGTCAAAGTCTTCCTCCGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SCRQEARTDSCSESKSSSGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...GGAGGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGCTTCCTGCCTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCAATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 2 (lower is better)
Translates to: FMSIIRQVCRSPSWVAWAIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...TGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 2 (lower is better)
Translates to: NFILWASSQLAWTCCSAWWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: NFILWASSQLAWTCCSAWARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 2 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 2 (lower is better)
Translates to: NFILWASSQLAWTCCSAWSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
3UTR-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: QIKTKLYMHGANASRHSSGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR CCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCCCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 2 (lower is better)
Translates to: NQVTHHHVADQLLELCRVPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCGGACTCCCTGGGCTCTaGTGTAGATTGAGGTGCCAA +
Preference number: 2 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAGLPGL*CRLRCQ
Trigger: TTGGCACCTCAATCTACACCAGAGCCCAGGGAGTCC...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
3UTR-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTAGGTACAGTTGTCCCTaGAGACCAAGCTGGAGCATC +
Preference number: 2 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSRYSCP*RPSWSI
Trigger: GATGCTCCAGCTTGGTCTCCAGGGACAACTGTACCT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCCAGAAAGAGCTGCCAGGCACAATACTGCTCAAAGGTCTCCCAGTCTAGGCTCCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: ARKSCQAQYCSKVSQSRLLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...GAGCCTAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 2 (lower is better)
Translates to: AESITATIMFSSSPLLKVCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 2 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: NFILWASSQLAWTCCSAWSRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 2 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 2 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR TCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
3UTR-3UTR TCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCGGAAATGGGATCATTTaGCAATTCTGTGAAACTTGC +
Preference number: 2 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESGNGII*QFCETC
Trigger: GCAAGTTTCACAGAATTGTCAAATGATCCCATTTCC...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAACTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SRAGGSQSWAASDIARRELESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR GCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 2 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 2 (lower is better)
Translates to: NFILWASSQLAWTCCSAWLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TCCTGTAGGCAGGAAGCAAGGACAGACAGCTGCTCCGAGTCAAAGTCTTCCTCCCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 2 (lower is better)
Translates to: SCRQEARTDSCSESKSSSLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...GGAGGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGCTTCCTGCCTACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp ATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGCACATCATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 2 (lower is better)
Translates to: IWKLCVDGGREVAQEPHIIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...GATGTGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 2 (lower is better)
Translates to: FRRLLGGLVEESSYSSAREVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTCAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAAGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: SRAGGSQSWAASDIARREGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR CCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAATGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 2 (lower is better)
Translates to: SRAGGSQSWAASDIARRECMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNILRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 2 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 2 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: GEEITEFHLVGFVTARLDMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...GTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCACTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: AVEILFIVTEGCLCIVIALAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 2 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCGCTTATCTGGCCAGCTaGCCCTTTGTCATTTCCCTT +
Preference number: 2 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAAYLAS*PFVISL
Trigger: AAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGC...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
3UTR-3UTR GCA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGCAATTCTGTGAAACTTaGCTCTGGGACTCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLQFCET*LWDSLG
Trigger: GCCCAGGGAGTCCCAGAGGCAAGTTTCACAGAATTG...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR GCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCAGACCAAGCTATACATaGACGGGGCAAATGCCAGCA +
Preference number: 2 (lower is better)
Translates to: CGICPMIRNGHPDHVIDARPSYT*TGQMPA
Trigger: TGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR GCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 2 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 2 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 2 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCATCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 2 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEASTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGCCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 2 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCATGCCCATTTCACACTaGCATGTGGATAGTGACTAT +
Preference number: 2 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGMPISH*HVDSDY
Trigger: ATAGTCACTATCCACATGCCAGTGTGAAATGGGCAT...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 2 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 2 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 2 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp TATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGCCAGGCACAATACTGCTCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: YLRCCRMGIMVSRGI*WARKSCQAQYCSKV
Trigger: GACCTTTGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: FTEPLASVRSQISLGTAVEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR GCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACCACACACTGAGTCTCTaGTCTCATCCTAGCTTATCT +
Preference number: 2 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHHTLSL*SHPSLS
Trigger: AGATAAGCTAGGATGAGAGCAGAGACTCAGTGTGTG...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTAATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: DHVQQLSAPQGFIWKLCVIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...TACACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGGGCTCCCACCTCCAGTaGCAGCAGGAAGGATGGGTA +
Preference number: 2 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQGSHLQ*QQEGWV
Trigger: TACCCATCCTTCCTGCTGCCACTGGAGGTGGGAGCC...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 2 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTTCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 2 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 2 (lower is better)
Translates to: FRRLLGGLVEESSYSSAREYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp GATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTATGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 2 (lower is better)
Translates to: DHVQQLSAPQGFIWKLCVWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...TACACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp CTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 2 (lower is better)
Translates to: LIFLRQGEEITEFHLVGFSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...GAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTTTTCACACTGGCATGTaGATAGTGACTATAAAACGT +
Preference number: 2 (lower is better)
Translates to: HGPASGHTVEGRASLSLPFHTGM*IVTIKR
Trigger: ACGTTTTATAGTCACTATCCACATGCCAGTGTGAAA...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGTCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAATCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 2 (lower is better)
Translates to: SRAGGSQSWAASDIARRESSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 90 bp AACTTCTCTCTCAGCATTGCCCGCAGCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGGTGTCTTTGTAATACGATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: NFSLSIARSSLSNLG*SNRGARCLCNTMAG
Trigger: TCCTGCCATCGTATTACAAAGACACCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACTTCCACTATGGTCTaGTTTTACAGAGCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKTSTMV*FYRASG
Trigger: GCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGT...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGGGCTCTGGTGTAGATTaGGGTGCCAACCTCAGACCA +
Preference number: 2 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQGSGVD*GANLRP
Trigger: TGGTCTGAGGTTGGCACCTCAATCTACACCAGAGCC...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAGGAAATGGGATCATTTaGCAATTCTGTGAAACTTGC +
Preference number: 2 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTGNGII*QFCETC
Trigger: GCAAGTTTCACAGAATTGTCAAATGATCCCATTTCC...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp TTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGTTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 2 (lower is better)
Translates to: FHLVGFVTARLDMLQRLELSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...CTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGATTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 2 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 2 (lower is better)
Translates to: DHVQQLSAPQGFIWKLCVGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TACACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp CTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 2 (lower is better)
Translates to: LFIVTEGCLCIVIATLILLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...AAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTTCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 2 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTACTTCCACTATGGTCTaGTTTTACAGAGCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNITSTMV*FYRASG
Trigger: GCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGT...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 2 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp CTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 2 (lower is better)
Translates to: LIFLRQGEEITEFHLVGFIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...GAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR GCA 90 bp TTGAGAACTGAGTCTTTTCGAAACATAACCAGGTTACCCATCATCACGTGGCAGTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 2 (lower is better)
Translates to: LRTESFRNITRLPIITWQWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...CTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGACTCAGTTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATTTCACACTGGCATGTaGATAGTGACTATAAAACGT +
Preference number: 2 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTFHTGM*IVTIKR
Trigger: ACGTTTTATAGTCACTATCCACATGCCAGTGTGAAA...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTATGCCCATTTCACACTaGCATGTGGATAGTGACTAT +
Preference number: 2 (lower is better)
Translates to: AESITATIMFSSSPLLKVMPISH*HVDSDY
Trigger: ATAGTCACTATCCACATGCCAGTGTGAAATGGGCAT...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR TCA 90 bp GATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTAGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: DHVQQLSAPQGFIWKLCVASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...TACACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR CCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAAATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: SRAGGSQSWAASDIARREILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCAATGCCCATTTCACACTaGCATGTGGATAGTGACTAT +
Preference number: 2 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPMPISH*HVDSDY
Trigger: ATAGTCACTATCCACATGCCAGTGTGAAATGGGCAT...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 2 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp TGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: CSLYLRCCRMGIMVSRGISLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGACATGGCCCAGCAAGTaGCCACACTTTGAATCACCA +
Preference number: 2 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMTWPSK*PHFESP
Trigger: TGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGT...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
3UTR-3UTR TCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGGGAAATGGGATCATTTaGCAATTCTGTGAAACTTGC +
Preference number: 2 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKGNGII*QFCETC
Trigger: GCAAGTTTCACAGAATTGTCAAATGATCCCATTTCC...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: REEGKRSLQWFRLSKEATASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR TCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 2 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNIEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 3 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 3 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 3 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp TGCCGCAGGATGCTGGTGGTGAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACCATCTTCACCATCTCC +
Preference number: 3 (lower is better)
Translates to: CRRMLVVNWSSG*QGRLSTIFTIS
Trigger: GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCACCACCAGCATCCTGCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp TTCATGCACCAGTGCCGCAGGATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATC +
Preference number: 3 (lower is better)
Translates to: FMHQCRRMLVVN*SSGWQGRLSTI
Trigger: GATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCACCACCAGCATCCTGCGGCACTGGTGCATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTTTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 3 (lower is better)
Translates to: HGPASGHTVEGRASLSLPFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CAA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR TCA 72 bp CATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: HVSCTSAAGCWW*TGRQDGRAGSA
Trigger: TGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCACCACCAGCATCCTGCGGCACTGGTGCATGAAACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTTTCCCCTGCAATCTCC +
Preference number: 3 (lower is better)
Translates to: PEEKAPPSTGGA*GCSKGVSPAIS
Trigger: GGAGATTGCAGGGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR-3UTR CAA 90 bp TTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGTTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 3 (lower is better)
Translates to: FHLVGFVTARLDMLQRLEFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...CTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGTTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 3 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CAA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 3 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR TCA 72 bp GGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTTCCCTGCGGCGGCTTT +
Preference number: 3 (lower is better)
Translates to: GVQIAQLGSLGK*LVQVHLPCGGF
Trigger: AAAGCCGCCGCAGGGAAGATGAACCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp CCTCTGGGACTCCCTGGGCTCTGGTGTAGATTGAGGTaGCAACCTCAGACCAACCTAAGCCTCCAGGGCACA +
Preference number: 3 (lower is better)
Translates to: PLGLPGLWCRLR*QPQTNLSLQGT
Trigger: TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAGCCCAGGGAGTCCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
3UTR GCA 72 bp TCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTAGCCTGGGCAAATGAC +
Preference number: 3 (lower is better)
Translates to: SWQAFMSIIRQV*RSPSWVAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTGAACTGGTCGTCAGGA +
Preference number: 3 (lower is better)
Translates to: CSASSSSCFMHQ*RRMLVVNWSSG
Trigger: TCCTGACGACCAGTTCACCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp AGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAG +
Preference number: 3 (lower is better)
Translates to: RAGQSCFSPALG*LGGRVLIFLRQ
Trigger: CTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CTGAAGCACTGCTGGAGCCCGACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCTTTCGACTTCGAGGGC +
Preference number: 3 (lower is better)
Translates to: LKHCWSPTLLRH*GAVWHSFDFEG
Trigger: GCCCTCGAAGTCGAAAGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 3 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGACCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 3 (lower is better)
Translates to: FRRLLGGLVEESSYSSARGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: FVTARLDMLQRLENWRLALMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 3 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCATGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGCTCCTTTCTGAATGCTaGTGGCATCTGCCCCATGAT +
Preference number: 3 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGLLSEC*WHLPHD
Trigger: ATCATGGGGCAGATGCCACAAGCATTCAGAAAGGAG...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTGGGCTCTGGTGTAGATaGAGGTGCCAACCTCAGACC +
Preference number: 3 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGGLWCR*RCQPQT
Trigger: GGTCTGAGGTTGGCACCTCAATCTACACCAGAGCCC...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 3 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: LSRRLSKCSRICSRVSWALRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 3 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR TCA 72 bp AGGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCACATCGTCCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: RFHLETLCRWRA*GGTGAAHRPPG
Trigger: GCCAGGAGGACGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR TCA 72 bp TTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGGGCCTCTGGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: FTISSLGFSLRS*SSRQDRASGCS
Trigger: GGAGCACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp GCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTaGTGGTTCACATGGCCCAGCAAGTGGCCACACTGT +
Preference number: 3 (lower is better)
Translates to: AGEQQHSQGTLL*WFTWPSKWPHC
Trigger: ACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR GCA 72 bp AGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCCAGCTTGCTGCTAGAG +
Preference number: 3 (lower is better)
Translates to: RLSRRLSKCSRI*SRVSWASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp TTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: LVLVRLSRRLSK*SRICSRVSWAS
Trigger: GCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp GGGGAATGCAGGGCCTCAGTCACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTT +
Preference number: 3 (lower is better)
Translates to: GECRASVTVRAH*RGPFSFPLGRL
Trigger: AAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGAGGCCCTGCATTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTaGAAGGAAGAGCATCTCTGTCCCTCCCTGGTATCC +
Preference number: 3 (lower is better)
Translates to: LLVHMAQQVATL*KEEHLCPSLVS
Trigger: GGATACCAGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 72 bp ATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGGTTCATCTTCCCTGCG +
Preference number: 3 (lower is better)
Translates to: IRQVCRSPSWVA*ANDSYRFIFPA
Trigger: CGCAGGGAAGATGAACCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp TGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: WTELLFAGSWVA*WKSPHIPPPGR
Trigger: TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp TTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCG +
Preference number: 3 (lower is better)
Translates to: FEGWTELLFAGS*VAWWKSPHIPP
Trigger: CGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGGGGCTCTGGTGTAGATaGAGGTGCCAACCTCAGACC +
Preference number: 3 (lower is better)
Translates to: NFILWASSQLAWTCCSAWGLWCR*RCQPQT
Trigger: GGTCTGAGGTTGGCACCTCAATCTACACCAGAGCCC...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 3 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLALSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 3 (lower is better)
Translates to: FVTARLDMLQRLENWRLATSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 3 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp TGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGA +
Preference number: 3 (lower is better)
Translates to: CGILSTSRAGQS*FSPALGWLGGR
Trigger: TCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp GCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTaGTGGTTCACATGGCCCAGCAAGTGGCCACACTTT +
Preference number: 3 (lower is better)
Translates to: AGEQQHSQGTLL*WFTWPSKWPHF
Trigger: AAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
3UTR CCA 72 bp CAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATaGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: QHSQGTLLCWFT*PSKWPHCGRKS
Trigger: GCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 72 bp GGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTaGTTCACATGGCCCAGCAAGTGGCCACACTGTGGA +
Preference number: 3 (lower is better)
Translates to: GEQQHSQGTLLC*FTWPSKWPHCG
Trigger: TCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 72 bp ACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: TELLFAGSWVAW*KSPHIPPPGRR
Trigger: TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGTGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CAA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGCTCCTTTCTGAATGCTaGTGGCATCTGCCCCATGAT +
Preference number: 3 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGLLSEC*WHLPHD
Trigger: ATCATGGGGCAGATGCCACAAGCATTCAGAAAGGAG...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
3UTR TCA 72 bp AGTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCGTATCACTCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: SLPPGPGPQFPA*PHTGPPYHSPS
Trigger: AGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp TCAAAGTCTTCCTCCAGGACCTGGTCCACAATTTCCTaGATGACCTCACACTGGGCCTCCGTATCACTCCCC +
Preference number: 3 (lower is better)
Translates to: SKSSSRTWSTIS*MTSHWASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGACTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp CAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATGGTCTCCAGGGGAATA +
Preference number: 3 (lower is better)
Translates to: QDRASGCSLYLR*CRMGIMVSRGI
Trigger: TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp GGCAGGCTGTTGTTCTTGATGAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCATGTTTCATGCACCAG +
Preference number: 3 (lower is better)
Translates to: GRLLFLMSRDLM*SASSSSCFMHQ
Trigger: CTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CCCAAACTTCACTCCTCAGTCCACCTCCATTCTCCCTaGACAGCGGGGGAACAACAGCATAGCCAAGGAACT +
Preference number: 3 (lower is better)
Translates to: PKLHSSVHLHSP*TAGEQQHSQGT
Trigger: AGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCAGGGAGAATGGAGGTGGACTGAGGAGTGAAGTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
3UTR CCA 72 bp TCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGGGACTCATCCAACTGG +
Preference number: 3 (lower is better)
Translates to: SHWASVSLPFCS*STLSLRDSSNW
Trigger: CCAGTTGGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp AGGACCTGGTCCACAATTTCCTGCATGACCTCACACTaGGCCTCCGTATCACTCCCCTTCTGTAGCTGGAGT +
Preference number: 3 (lower is better)
Translates to: RTWSTISCMTSH*ASVSLPFCSWS
Trigger: ACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp ATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGACTCGTACAGGTTCATC +
Preference number: 3 (lower is better)
Translates to: MSIIRQVCRSPS*VAWANDSYRFI
Trigger: GATGAACCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGG +
Preference number: 3 (lower is better)
Translates to: LNFILWASSQLA*TCCSAWRIGVW
Trigger: CCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 3 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TCCTGTAGGCAGGAAGCAAGGACAGACAGCTGCTCCGAGTCAAAGTCTTCCTCCACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 3 (lower is better)
Translates to: SCRQEARTDSCSESKSSSTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...GGAGGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGCTTCCTGCCTACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: NFILWASSQLAWTCCSAWTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GCCAGAAAGAGCTGCCAGGCACAATACTGCTCAAAGGTCTCCCAGTCTAGGCTCACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: ARKSCQAQYCSKVSQSRLTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...GAGCCTAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCATCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 3 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 3 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGSLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp TTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATTGGCGTCTGGCTAAAA +
Preference number: 3 (lower is better)
Translates to: FILWASSQLAWT*CSAWRIGVWLK
Trigger: TTTTAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp GGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTaGTTCACATGGCCCAGCAAGTGGCCACACTTTGAA +
Preference number: 3 (lower is better)
Translates to: GEQQHSQGTLLC*FTWPSKWPHFE
Trigger: TTCAAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
3UTR-3UTR CAA 90 bp TACAGAGGCTTTCCTACAGACTCCTCCAGGGACTCCTCAGTAATCTCCTCAGGCACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: YRGFPTDSSRDSSVISSGTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...GCCTGAGGAGATTACTGAGGAGTCCCTGGAGGAGTCTGTAGGAAAGCCTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGCAAGTGGCCACACTTaGAATCACCAAGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHASGHT*NHQEGE
Trigger: CTCTCCTTCTTGGTGATTCAAAGTGTGGCCACTTGC...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
3UTR CCA 72 bp TGGCCCTCAGGTAGTAGAGCAGGTGGTAGCCAATCTTaGGCTGCTTCTGATATAGCTCGGAGAGAAGGTCTA +
Preference number: 3 (lower is better)
Translates to: WPSGSRAGGSQS*AASDIARREGL
Trigger: TAGACCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACTACCTGAGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp TGCAGGATGGGGATTATGGTCTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAGGCACAATACTGCTCA +
Preference number: 3 (lower is better)
Translates to: CRMGIMVSRGIL*ARKSCQAQYCS
Trigger: TGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCATCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATaGCCCAGCAAGTGGCCACACTTTGAATCACCAAGA +
Preference number: 3 (lower is better)
Translates to: QHSQGTLLCWFT*PSKWPHFESPR
Trigger: TCTTGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
3UTR-3UTR CAA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCACATTTCCCTTCTCTGTaGAAATGGCTCTTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPHFPSL*KWLFGR
Trigger: TCTCCCAAAGAGCCATTTCAACAGAGAAGGGAAATG...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CAA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 3 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGTTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 3 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTTTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 3 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAATGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 3 (lower is better)
Translates to: SRAGGSQSWAASDIARRECSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 3 (lower is better)
Translates to: KRSLNFILWASSQLAWTCRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR GCA 72 bp GTAGGGGTGCCAATCAAATCAAGACCAAGCTATACATaGACGGGGCAAATGCCAGCAGACACTCCAGCACAA +
Preference number: 3 (lower is better)
Translates to: VGVPIKSRPSYT*TGQMPADTPAQ
Trigger: TTGTGCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTGATTGGCACCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR-3UTR CAA 90 bp CTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCTTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 3 (lower is better)
Translates to: LIFLRQGEEITEFHLVGFLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...GAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CCTCCGGCCATTCTTGGTAGGCACACAGACTTCAACTaGAGGATGACAGACCTTTTGGAAGCATCTTGTTTC +
Preference number: 3 (lower is better)
Translates to: PPAILGRHTDFN*RMTDLLEASCF
Trigger: GAAACAAGATGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CCA 72 bp CTTATCCGACATATGGTTGTCCATCTCCATGGAAACTaGCTCCTCAATTTTGACTTCCACAGGTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: LIRHMVVHLHGN*LLNFDFHRWGG
Trigger: CCCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp CTCATCCAACTGGTCAAGGTAAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTCCTTGATAGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: LIQLVKVRGDIN*LLHNCLLDRVE
Trigger: TTCCACCCTATCAAGGAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCTTACCTTGACCAGTTGGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp TACAGAGGCTTTCCTACAGACTCCTCCAGGGACTCCTCAGTAATCTCCTCAGGCTTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 3 (lower is better)
Translates to: YRGFPTDSSRDSSVISSGFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...GCCTGAGGAGATTACTGAGGAGTCCCTGGAGGAGTCTGTAGGAAAGCCTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: AESITATIMFSSSPLLKVSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp TCTTTTCGAAACATAACCAGGTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGCTGTGCAGAGTCAATA +
Preference number: 3 (lower is better)
Translates to: SFRNITRLPIIT*QTSSWSCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR-3UTR CAA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 3 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CCA 72 bp GAGGACTTCCACTATGGTCTGATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAATATCACTGGGAACAG +
Preference number: 3 (lower is better)
Translates to: EDFHYGLILQSL*LQSDPKYHWEQ
Trigger: CTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
3UTR GCA 72 bp TTTGCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCAACTCTCATCCTTATC +
Preference number: 3 (lower is better)
Translates to: FAVEILFIVTEG*LCIVIATLILI
Trigger: GATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCTCCTGGGGCTCCTaGTCCCGCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSPSWGS*SRSSSS
Trigger: GGAGGAGGAGGAGCGGGAGCAGGAGCCCCAGGAGGG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCCTCCTGGGGCTCCTaGTCCCGCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPPSWGS*SRSSSS
Trigger: GGAGGAGGAGGAGCGGGAGCAGGAGCCCCAGGAGGG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCGAGTGTGGGTTGTaGCCCCGGGTGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSPECGL*PRVSCP
Trigger: GGGGCAGGACACCCGGGGCCACAACCCACACTCGGG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCCCGAGTGTGGGTTGTaGCCCCGGGTGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVPECGL*PRVSCP
Trigger: GGGGCAGGACACCCGGGGCCACAACCCACACTCGGG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACTGGGGTGGCAGTGCTaGGGGAAAGGCGTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALGWQC*GKGVGS
Trigger: GGAGCCAACGCCTTTCCCTCAGCACTGCCACCCCAG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCCTCCTGGGGCTCCTaGTCCCGCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDPSWGS*SRSSSS
Trigger: GGAGGAGGAGGAGCGGGAGCAGGAGCCCCAGGAGGG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGGAGTGCAGCGCCTTTaGATCCGGCCCCTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSGVQRL*IRPLGG
Trigger: ACCCCCTAGGGGCCGGATCCAAAGGCGCTGCACTCC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAGGCCGCGCCTGCGTTaGGGGCGAAGGCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQRPRLR*GRRHSP
Trigger: AGGACTGTGCCTTCGCCCCCAACGCAGGCGCGGCCT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTGGGCCAGCTTGCTGCTAGAGCTCCTCAGGCTCTGTCTCTTGCGAGGCAGGCTCAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGQLAARAPQALSLARQAQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...AGCCTGCCTCGCAAGAGACAGAGCCTGAGGAGCTCTAGCAGCAAGCTGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCACAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGACAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTCCAGGGCACACCACGTaGGGCTGTGGCCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAPGHTT*GCGHPF
Trigger: GAAAGGGTGGCCACAGCCCCACGTGGTGTGCCCTGG...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACCAGGGCACACCACGTaGGGCTGTGGCCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAPGHTT*GCGHPF
Trigger: GAAAGGGTGGCCACAGCCCCACGTGGTGTGCCCTGG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAACRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGGGCAGTCCCATGGTaGTCCACGATGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAWAVPW*STMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSSWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGSWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAANWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTCCAGGGCACACCACGTaGGGCTGTGGCCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: AADCPSAPGSAPESAGPAPGHTT*GCGHPF
Trigger: GAAAGGGTGGCCACAGCCCCACGTGGTGTGCCCTGG...AGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACAGCACCGTCTACACTaGACGCCGAGGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAQHRLH*TPRVEG
Trigger: GCCTTCCACCCTCGGCGTCCAGTGTAGACGGTGCTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSSGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACAGGGACTTCCTGGCTaGTGCCCCAAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQQGLPG*CPKAWG
Trigger: TCCCCAAGCCTTGGGGCATCAGCCAGGAAGTCCCTG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS-3UTR GCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACACCCTCCTGGGGCTCCTaGTCCCGCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTPSWGS*SRSSSS
Trigger: GGAGGAGGAGGAGCGGGAGCAGGAGCCCCAGGAGGG...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAARAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGGGAGTGCAGCGCCTTTaGATCCGGCCCCTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGGVQRL*IRPLGG
Trigger: ACCCCCTAGGGGCCGGATCCAAAGGCGCTGCACTCC...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGGAGTGCAGCGCCTTTaGATCCGGCCCCTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAGVQRL*IRPLGG
Trigger: ACCCCCTAGGGGCCGGATCCAAAGGCGCTGCACTCC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCCTTCTGCAACTCCATaGCTGCAGCCAGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVPSATP*LQPGAG
Trigger: CCCGGCTCCTGGCTGCAGCCATGGAGTTGCAGAAGG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTGGGCAGTCCCATGGTaGTCCACGATGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISWAVPW*STMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCA...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTGGGCAGTCCCATGGTaGTCCACGATGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVWAVPW*STMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: AADCPSAPGSAPESAGPAMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...AGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSSSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGCAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: FRRLLGGLVEESSYSSARQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCTCCAGGCATAGTCTaGGCCAGGGCAGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVAPGIV*ARAAPS
Trigger: AGACGGTGCTGCCCTGGCCCAGACTATGCCTGGAGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGCTCCAGGCATAGTCTaGGCCAGGGCAGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSAPGIV*ARAAPS
Trigger: AGACGGTGCTGCCCTGGCCCAGACTATGCCTGGAGC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVSGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACAGGGACTTCCTGGCTaGTGCCCCAAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGQGLPG*CPKAWG
Trigger: TCCCCAAGCCTTGGGGCATCAGCCAGGAAGTCCCTG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTGCTCCCGAAGCAGCTaGTGCTGCTGCCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDCSRSS*CCCRPF
Trigger: AAAGGGGCGGCAGCAGCAGCAGCTGCTTCGGGAGCA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGAGGAAAAGACACCCTaGCGCACGTGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAEEKTP*RTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCCAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLASRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTGGGCCAGCTTGCTGCTAGAGCTCCTCAGGCTCTGTCTCTTGCGAGGCAGGCTCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: LGQLAARAPQALSLARQALAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...AGCCTGCCTCGCAAGAGACAGAGCCTGAGGAGCTCTAGCAGCAAGCTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAAGGCCGCGCCTGCGTTaGGGGCGAAGGCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTRPRLR*GRRHSP
Trigger: AGGACTGTGCCTTCGCCCCCAACGCAGGCGCGGCCT...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACCTTCTGCAACTCCATaGCTGCAGCCAGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGPSATP*LQPGAG
Trigger: CCCGGCTCCTGGCTGCAGCCATGGAGTTGCAGAAGG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTTGGGCAGTCCCATGGTaGTCCACGATGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HGPASGHTVEGRASLSLPWAVPW*STMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCA...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGGGCAGTCCCATGGTaGTCCACGATGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAWAVPW*STMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAACMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCACAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGATCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRSTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSSTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGACAGATCAGTGCCTaGCTCCCACCTCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSRQISA*LPPPVA
Trigger: TGCCACTGGAGGTGGGAGCCAGGCACTGATCTGTCT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACTGGGGTGGCAGTGCTaGGGGAAAGGCGTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTLGWQC*GKGVGS
Trigger: GGAGCCAACGCCTTTCCCTCAGCACTGCCACCCCAG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCCATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGTCACAGCGCAGAGACTaGCTATCTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGSQRRD*LSGVDR
Trigger: CCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGA...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGACACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPLESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCCCCTTTTCCCTTCTaGAACTCCATGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVAPFPF*NSMAAA
Trigger: GGCTGCAGCCATGGAGTTGCAGAAGGGAAAAGGGGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGCCCCTTTTCCCTTCTaGAACTCCATGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSAPFPF*NSMAAA
Trigger: GGCTGCAGCCATGGAGTTGCAGAAGGGAAAAGGGGC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCGAAGCAGCTGCTGCTaGTGCCGCCCCTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRSSCC*CRPFSL
Trigger: AAGGGAAAAGGGGCGGCAGCAGCAGCAGCTGCTTCG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACGAAGCAGCTGCTGCTaGTGCCGCCCCTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGRSSCC*CRPFSL
Trigger: AAGGGAAAAGGGGCGGCAGCAGCAGCAGCTGCTTCG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAGFMEW*MTRMAG
Trigger: ACCAGCCATCCTGGTCATGCACCACTCCATGAAGCC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSGFMEW*MTRMAG
Trigger: ACCAGCCATCCTGGTCATGCACCACTCCATGAAGCC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGAGGAAAAGACACCCTaGCGCACGTGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVEEKTP*RTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAACFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDARAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCAGGACCCACTCCCTaGAGGGAGGAAACACACTGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSGPTP*REETHW
Trigger: CCAGTGTGTTTCCTCCCTGCAGGGAGTGGGTCCTGA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGAGGGAAAGGCGTTaGCTCCGAAGTACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLRERR*LRSTVG
Trigger: CCCCACTGTACTTCGGAGCCAACGCCTTTCCCTCAG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGATATCGGGATCTCTaGATTGCCAGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSRYRDL*IARDWG
Trigger: CCCCCAGTCCCTGGCAATCCAGAGATCCCGATATCT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGGGGCTTCATGGAGTaGTGCATGACCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSWGFME*CMTRMA
Trigger: AGCCATCCTGGTCATGCACCACTCCATGAAGCCCCA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTGGAGTAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SCMTSHWASVSLPFCSWSNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...ACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCATCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: FMSIIRQVCRSPSWVAWASSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...TGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: FVTARLDMLQRLENWRLASSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSLLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCCAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACACAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCACAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CCA 90 bp ACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTTTGAATCACCACAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLLCWFTWPSKWPHFESPQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...TGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDASTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDSTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGGCTCCCACCTCCAGTaGCAGCAGGAAGGATGGGTA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAGSHLQ*QQEGWV
Trigger: TACCCATCCTTCCTGCTGCCACTGGAGGTGGGAGCC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACTGGACGCCGAGGGTaGAAGGCATACAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAATGRRG*KAYSSA
Trigger: AGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTGCCAGGGACTTCCTaGCTGATGCCCCAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLPGTS*LMPQGL
Trigger: CAAGCCTTGGGGCATCAGCCAGGAAGTCCCTGGCAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
3UTR CAA 72 bp TGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGGCTCTGTCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: CSRICSRVSWAS*LLELLRLCLLR
Trigger: TCGCAAGAGACAGAGCCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 72 bp CTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LDRAAFRRLLGG*VEESSYSSARE
Trigger: CTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACGGAAACCTTCCTGGCTaGTGCCCCAAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHGNLPG*CPKAWG
Trigger: TCCCCAAGCCTTGGGGCATCAGCCAGGAAGGTTTCC...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGCTGTAGGATACCTGTaGACTGAGGACTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSAVGYL*TEDSRP
Trigger: AGGCCTTGAGTCCTCAGTTCACAGGTATCCTACAGC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGCTGACTATCTGGAGTTaGCAGGTACTGGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWLTIWS*QVLALE
Trigger: TTCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAG...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACTGACTATCTGGAGTTaGCAGGTACTGGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALTIWS*QVLALE
Trigger: TTCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCACAGCGCAGAGACTaGCTATCTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASQRRD*LSGVDR
Trigger: CCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCTCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVSGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HGPASGHTVEGRASLSLPHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDLESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGLESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGTGGCATCTGCCCCATaGTTAGGAATGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: AFMSIIRQVCRSPSWVAWVASAP*LGMDTL
Trigger: CAGGGTGTCCATTCCTAATCATGGGGCAGATGCCAC...CCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGTGGCATCTGCCCCATaGTTAGGAATGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPVASAP*LGMDTL
Trigger: CAGGGTGTCCATTCCTAATCATGGGGCAGATGCCAC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCCCCTTTTCCCTTCTaGAACTCCATGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGAPFPF*NSMAAA
Trigger: GGCTGCAGCCATGGAGTTGCAGAAGGGAAAAGGGGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCACGAAGCAGCTGCTGCTaGTGCCGCCCCTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPRSSCC*CRPFSL
Trigger: AAGGGAAAAGGGGCGGCAGCAGCAGCAGCTGCTTCG...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRGFMEW*MTRMAG
Trigger: ACCAGCCATCCTGGTCATGCACCACTCCATGAAGCC...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLGFMEW*MTRMAG
Trigger: ACCAGCCATCCTGGTCATGCACCACTCCATGAAGCC...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGGAGGAAAAGACACCCTaGCGCACGTGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGEEKTP*RTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTC...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGAGGAAAAGACACCCTaGCGCACGTGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGEEKTP*RTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGAGGAAAAGACACCCTaGCGCACGTGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDEEKTP*RTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: AFMSIIRQVCRSPSWVAWIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...CCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDASRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAARRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCCAATTCTGTGAAACTTaGCTCTGGGACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESQFCET*LWDSLG
Trigger: GCCCAGGGAGTCCCAGAGGCAAGTTTCACAGAATTG...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATCAGGACCCACTCCCTaGAGGGAGGAAACACACTGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDASGPTP*REETHW
Trigger: CCAGTGTGTTTCCTCCCTGCAGGGAGTGGGTCCTGA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGGCTCCGAAGTACAGTaGGGTAAAGGCCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGGSEVQ*GKGLCP
Trigger: GGGACACAGGCCTTTACCCCACTGTACTTCGGAGCC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACAGGGAGTGGATGGATaGACAGTCCTAGATATCGGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAQGVDG*TVLDIG
Trigger: CCCGATATCTAGGACTGTCCATCCATCCACTCCCTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPASWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHSWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATGGGGCTTCATGGAGTaGTGCATGACCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQWGFME*CMTRMA
Trigger: AGCCATCCTGGTCATGCACCACTCCATGAAGCCCCA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDACRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCACGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: FMSIIRQVCRSPSWVAWARTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...TGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCAGAAAGAGCTGCCAGGCACAATACTGCTCAAAGGTCTCCCAGTCTAGGCTCATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: ARKSCQAQYCSKVSQSRLMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...GAGCCTAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDACSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSTCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVTCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPTCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGACTCCCTGGGCTCTaGTGTAGATTGAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGLPGL*CRLRCQ
Trigger: TTGGCACCTCAATCTACACCAGAGCCCAGGGAGTCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGTTTTATCCCGAGTGTaGGTTGTGGCCCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAVLSRV*VVAPGV
Trigger: GACACCCGGGGCCACAACCCACACTCGGGATAAAAC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGTTTTATCCCGAGTGTaGGTTGTGGCCCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDVLSRV*VVAPGV
Trigger: GACACCCGGGGCCACAACCCACACTCGGGATAAAAC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTGCCAGGGACTTCCTaGCTGATGCCCCAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLPGTS*LMPQGL
Trigger: CAAGCCTTGGGGCATCAGCCAGGAAGTCCCTGGCAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACCAATTCACGCTTCTTaGGCTTGGCTACAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAPIHAS*AWLQCL
Trigger: GAGGCACTGTAGCCAAGCCCAAGAAGCGTGAATTGG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAACAGCCATGGCAATaGGGATGCTGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAKQPWQ*GCCSSG
Trigger: TCCTGAAGAGCAGCATCCTCATTGCCATGGCTGTTT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000512605.4
ENST00000571768.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCTGTAGGATACCTGTaGACTGAGGACTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVAVGYL*TEDSRP
Trigger: AGGCCTTGAGTCCTCAGTTCACAGGTATCCTACAGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCTGACTATCTGGAGTTaGCAGGTACTGGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLTIWS*QVLALE
Trigger: TTCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTGACTATCTGGAGTTaGCAGGTACTGGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPLTIWS*QVLALE
Trigger: TTCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTCACAGCGCAGAGACTaGCTATCTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSSQRRD*LSGVDR
Trigger: CCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGACACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGSWVAWWKSPHIPPPGRGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...TCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGTGCTCCCGAAGCAGCTaGTGCTGCTGCCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRCSRSS*CCCRPF
Trigger: AAAGGGGCGGCAGCAGCAGCAGCTGCTTCGGGAGCA...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGGCAGATTTCTTCATaGTGGGGGAGGCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPRQISS*WGRPLH
Trigger: GTGCAAAGGCCTCCCCCAGCATGAAGAAATCTGCCT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGACCCACTCCCTTTaGTCTGTCAGGATATCCAGA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSRTHSL*SVRISR
Trigger: TCTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGGFMEW*MTRMAG
Trigger: ACCAGCCATCCTGGTCATGCACCACTCCATGAAGCC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDADRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDACFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCACTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPLAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPLAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGCTTATCTGGCCAGCTaGCCCTTTGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSAYLAS*PFVISL
Trigger: AAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGCTTATCTGGCCAGCTaGCCCTTTGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAAYLAS*PFVISL
Trigger: AAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGACCAAGCTATACATaGACGGGGCAAATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAARPSYT*TGQMPA
Trigger: TGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAGATATCGGGATCTCTaGATTGCCAGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDARYRDL*IARDWG
Trigger: CCCCCAGTCCCTGGCAATCCAGAGATCCCGATATCT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACCTTGGCATCCAAACTaGTTGAAAGTAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAPWHPN*LKVAAS
Trigger: GGAGGCTGCTACTTTCAACCAGTTTGGATGCCAAGG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCTGGGCAGTCCCATGGTaGTCCACGATGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAWAVPW*STMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCA...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SCAESITATIMFSSSPLLSWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGACAGGTACTGGCGCTaGAACCAATCTTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPDRYWR*NQSWYR
Trigger: GCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGACAGGTACTGGCGCTaGAACCAATCTTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQDRYWR*NQSWYR
Trigger: GCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCTGGGGCTTCATGGAGTaGTGCATGACCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSWGFME*CMTRMA
Trigger: AGCCATCCTGGTCATGCACCACTCCATGAAGCCCCA...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSHVALQ*WIEVGN
Trigger: ATTCCCAACTTCTATCCACCATTGGAGGGCCACGTG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAHVALQ*WIEVGN
Trigger: ATTCCCAACTTCTATCCACCATTGGAGGGCCACGTG...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCACTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDATSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGGGGATTATGGTCTCCAGGGGAATATTGTGGGCCAGAAAGAGCTGCCAGGCACCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: WGLWSPGEYCGPERAARHLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...GTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSSRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPSRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGTCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NFILWASSQLAWTCCSAWSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGACTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVTLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVTLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGCTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: FRRLLGGLVEESSYSSARLLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCCTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSLLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGTCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NFILWASSQLAWTCCSAWSTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
3UTR CAA 72 bp CTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRGLDRAAFRRL*GGLVEESSYSS
Trigger: GGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGAAACCTTCCTGGCTaGTGCCCCAAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRGNLPG*CPKAWG
Trigger: TCCCCAAGCCTTGGGGCATCAGCCAGGAAGGTTTCC...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTAAACAGCCATGGCAATaGGGATGCTGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVKQPWQ*GCCSSG
Trigger: TCCTGAAGAGCAGCATCCTCATTGCCATGGCTGTTT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000512605.4
ENST00000571768.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGCATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: FHLVGFVTARLDMLQRLEHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...CTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTCCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCTGTAGGATACCTGTaGACTGAGGACTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDAVGYL*TEDSRP
Trigger: AGGCCTTGAGTCCTCAGTTCACAGGTATCCTACAGC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGCGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCT +
Preference number: 4 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWRDVLD*RSCRIP
Trigger: AGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCG...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSRDVLD*RSCRIP
Trigger: AGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATCACAGCGCAGAGACTaGCTATCTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDASQRRD*LSGVDR
Trigger: CCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCACAGCGCAGAGACTaGCTATCTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSQRRD*LSGVDR
Trigger: CCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDASWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDSWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HGPASGHTVEGRASLSLPGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GCCAGAAAGAGCTGCCAGGCACAATACTGCTCAAAGGTCTCCCAGTCTAGGCTCCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ARKSCQAQYCSKVSQSRLPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...GAGCCTAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: FRRLLGGLVEESSYSSARWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAGGCAGATTTCTTCATaGTGGGGGAGGCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRQISS*WGRPLH
Trigger: GTGCAAAGGCCTCCCCCAGCATGAAGAAATCTGCCT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTCCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPGFMEW*MTRMAG
Trigger: ACCAGCCATCCTGGTCATGCACCACTCCATGAAGCC...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: HGPASGHTVEGRASLSLPQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDARRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHLAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHLAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCCAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCCCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCTTATCTGGCCAGCTaGCCCTTTGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVAYLAS*PFVISL
Trigger: AAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGCAATTCTGTGAAACTTaGCTCTGGGACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FRRLLGGLVEESSYSSARQFCET*LWDSLG
Trigger: GCCCAGGGAGTCCCAGAGGCAAGTTTCACAGAATTG...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGAAGGCATACAGTTCTaGTTGGTGTTGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSEGIQF*LVLVRL
Trigger: CAACCTGACCAACACCAAGCAGAACTGTATGCCTTC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCGCCCCTGAAGAAGTaGACCCTAAGAGCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSPPLKK*TLRASD
Trigger: GTCAGACGCTCTTAGGGTCCACTTCTTCAGGGGCGG...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTGCAAGAGGAACAAGTTaGGGAGGGGAGAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSARGTS*GGESKG
Trigger: GCCCTTGCTCTCCCCTCCCCAACTTGTTCCTCTTGC...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAGCAAGAGGAACAAGTTaGGGAGGGGAGAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAARGTS*GGESKG
Trigger: GCCCTTGCTCTCCCCTCCCCAACTTGTTCCTCTTGC...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTGGGCAGTCCCATGGTaGTCCACGATGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSWAVPW*STMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGGACAGGTACTGGCGCTaGAACCAATCTTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGDRYWR*NQSWYR
Trigger: GCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTC...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGACAGGTACTGGCGCTaGAACCAATCTTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGDRYWR*NQSWYR
Trigger: GCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCAAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: FMSIIRQVCRSPSWVAWAKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...TGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAAACAAAGCCAGCTTaGCATTGGAGGCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAKTKPA*HWRQRH
Trigger: ATGTCGCTGCCTCCAATGCCAAGCTGGCTTTGTTTT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVHVALQ*WIEVGN
Trigger: ATTCCCAACTTCTATCCACCATTGGAGGGCCACGTG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: AFMSIIRQVCRSPSWVAWHVALQ*WIEVGN
Trigger: ATTCCCAACTTCTATCCACCATTGGAGGGCCACGTG...CCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSHVALQ*WIEVGN
Trigger: ATTCCCAACTTCTATCCACCATTGGAGGGCCACGTG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGTGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: NFILWASSQLAWTCCSAWCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCACGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPARTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: NFILWASSQLAWTCCSAWRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: FRRLLGGLVEESSYSSARWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HGPASGHTVEGRASLSLPSRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTGGAGTGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: SCMTSHWASVSLPFCSWSAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...ACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTGGAGTACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SCMTSHWASVSLPFCSWSTCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...ACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRSSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDASPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGTLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGGCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GLCGILSTSRAGQSCFSPTLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...CGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGGGACTCCCTGGGCTCTaGTGTAGATTGAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: FHLVGFVTARLDMLQRLEGLPGL*CRLRCQ
Trigger: TTGGCACCTCAATCTACACCAGAGCCCAGGGAGTCC...CTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCATCCTACGGGGGATaGTTCTGCATAGACAGATCA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASSYGG*FCIDRS
Trigger: TGATCTGTCTATGCAGAACCATCCCCCGTAGGATGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGATATCGGGATCTCTaGATTGCCAGGGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPRYRDL*IARDFL
Trigger: CAGGAAGTCCCTGGCAATCCAGAGATCCCGATATCT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCACGCTTCTTGGGCTTaGCTACAGTGCCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVHASWA*LQCLRN
Trigger: ATTTCTGAGGCACTGTAGCCAAGCCCAAGAAGCGTG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACACGCTTCTTGGGCTTaGCTACAGTGCCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQHASWA*LQCLRN
Trigger: ATTTCTGAGGCACTGTAGCCAAGCCCAAGAAGCGTG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCAATTCACGCTTCTTaGGCTTGGCTACAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDPIHAS*AWLQCL
Trigger: GAGGCACTGTAGCCAAGCCCAAGAAGCGTGAATTGG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAAACAGCCATGGCAATaGGGATGCTGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAKQPWQ*GCCSSG
Trigger: TCCTGAAGAGCAGCATCCTCATTGCCATGGCTGTTT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000512605.4
ENST00000571768.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCACCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCGCTGTAGGATACCTGTaGACTGAGGACTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TWSTISCMTSHWASVSLPAVGYL*TEDSRP
Trigger: AGGCCTTGAGTCCTCAGTTCACAGGTATCCTACAGC...GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSRDVLD*RSCRIP
Trigger: AGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACCTGACTATCTGGAGTTaGCAGGTACTGGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHLTIWS*QVLALE
Trigger: TTCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAG...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTCACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SCAESITATIMFSSSPLLPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CACTCCCCTTCTGTAGCTGGAGTACTTTGTCCCTCAGGGACTCATCCAACTGGTCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSPSVAGVLCPSGTHPTGLESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...ACCAGTTGGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HGPASGHTVEGRASLSLPILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCATTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: FMSIIRQVCRSPSWVAWAFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...TGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTACTTCCACTATGGTCTaGTTTTACAGAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVTSTMV*FYRASG
Trigger: GCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCAGGACAATATTCATaGCATCACGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASGQYS*HHDSPE
Trigger: CTCTGGTGAGTCGTGATGGCATGAATATTGTCCTGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAGGACCCACTCCCTTTaGTCTGTCAGGATATCCAGA +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRTHSL*SVRISR
Trigger: TCTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAAGGACCCACTCCCTTTaGTCTGTCAGGATATCCAGA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGRTHSL*SVRISR
Trigger: TCTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDACQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CATGGCCCAGCAAGTGGCCACACTGTGGAAGGAAGAGCATCTCTGTCCCTCCCTTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: HGPASGHTVEGRASLSLPCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...AGGGAGGGACAGAGATGCTCTTCCTTCCACAGTGTGGCCACTTGCTGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: GLDRAAFRRLLGGLVEESLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...GGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TGGGGATTATGGTCTCCAGGGGAATATTGTGGGCCAGAAAGAGCTGCCAGGCACGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: WGLWSPGEYCGPERAARHARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...GTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TWSTISCMTSHWASVSLPSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AESITATIMFSSSPLLKVRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACCCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDATVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCACACACTGAGTCTCTaGTCTCATCCTAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSHTLSL*SHPSLS
Trigger: AGATAAGCTAGGATGAGAGCAGAGACTCAGTGTGTG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCACAATTCTGTGAAACTTaGCTCTGGGACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPQFCET*LWDSLG
Trigger: GCCCAGGGAGTCCCAGAGGCAAGTTTCACAGAATTG...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATACGGGGGATGGTTCTaGATAGACAGATCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAYGGWF*IDRSVP
Trigger: AGGCACTGATCTGTCTATGCAGAACCATCCCCCGTA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGGTAGGAAACCTTCCTaGCTGATGCCCCAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTGRKPS*LMPQGL
Trigger: CAAGCCTTGGGGCATCAGCCAGGAAGGTTTCCTACC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCCCGCCCCTGAAGAAGTaGACCCTAAGAGCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAPPLKK*TLRASD
Trigger: GTCAGACGCTCTTAGGGTCCACTTCTTCAGGGGCGG...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCCTTCTGCAACTCCATaGCTGCAGCCAGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLPSATP*LQPGAG
Trigger: CCCGGCTCCTGGCTGCAGCCATGGAGTTGCAGAAGG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGAGCTGGGCAGTCCCATaGTGGTCCACGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLSWAVP*WSTMRR
Trigger: CCGCCTCATCGTGGACCACCATGGGACTGCCCAGCT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGHVALQ*WIEVGN
Trigger: ATTCCCAACTTCTATCCACCATTGGAGGGCCACGTG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSRFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAARFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCATCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: FMSIIRQVCRSPSWVAWASSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...TGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGATGGAGGGCGTGAGGTaGCACAGGAGCCGCACATCG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLMEGVR*HRSRTS
Trigger: CGATGTGCGGCTCCTGTGCCACCTCACGCCCTCCAT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLLPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGGCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: GLCGILSTSRAGQSCFSPSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...CGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CACTCCCCTTCTGTAGCTGGAGTACTTTGTCCCTCAGGGACTCATCCAACTGGTTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: HSPSVAGVLCPSGTHPTGCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...ACCAGTTGGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSSSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: AFMSIIRQVCRSPSWVAWLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...CCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TCCTGTAGGCAGGAAGCAAGGACAGACAGCTGCTCCGAGTCAAAGTCTTCCTCCTTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SCRQEARTDSCSESKSSSFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...GGAGGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGCTTCCTGCCTACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCATTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCAGCCGGGGGTGGGATaGGGAATGCAGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVQPGVG*GMQGLS
Trigger: ACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCACAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAQSSRG*DGECRA
Trigger: GGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTG...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACATGGCAGCAGGAAGGATaGGTAGTGGCCAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTWQQEG*VVAKAK
Trigger: CTTGGCTTTGGCCACTACCCATCCTTCCTGCTGCCA...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACACACAGACTTCAACTaGAGGATGACAGACCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAHTDFN*RMTDLL
Trigger: CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAGATATCGGGATCTCTaGATTGCCAGGGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRYRDL*IARDFL
Trigger: CAGGAAGTCCCTGGCAATCCAGAGATCCCGATATCT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS-3UTR TCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCACCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDARDVLD*RSCRIP
Trigger: AGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATCACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAATCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRAGGSQSWAASDIARRESGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCCACAATTTCCTGCATaGCCTCACACTGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHPQFPA*PHTGPP
Trigger: CGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTGTAGATGGAGGGCGTaGGGTGGCACAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVCRWRA*GGTGAA
Trigger: TGCGGCTCCTGTGCCACCTCACGCCCTCCATCTACA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCAGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCGGCTCTGGTGTAGATTaGGGTGCCAACCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: SCAESITATIMFSSSPLLGSGVD*GANLRP
Trigger: TGGTCTGAGGTTGGCACCTCAATCTACACCAGAGCC...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAACTTCAACTGGAGGATaGCAGACCTTTTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQTSTGG*QTFWKH
Trigger: ATGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCACCAAAAGGCCGCGCCTaGGTTGGGGGCGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAPKGRA*VGGEGT
Trigger: TGTGCCTTCGCCCCCAACGCAGGCGCGGCCTTTTGG...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCGAAGCAGCTGCTGCTaGTGCCGCCCCTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLRSSCC*CRPFSL
Trigger: AAGGGAAAAGGGGCGGCAGCAGCAGCAGCTGCTTCG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTTGCTCCCGAAGCAGCTaGTGCTGCTGCCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACCSRSS*CCCRPF
Trigger: AAAGGGGCGGCAGCAGCAGCAGCTGCTTCGGGAGCA...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGGCAGATTTCTTCATaGTGGGGGAGGCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPARQISS*WGRPLH
Trigger: GTGCAAAGGCCTCCCCCAGCATGAAGAAATCTGCCT...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCAGGACAATATTCATaGCATCACGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSGQYS*HHDSPE
Trigger: CTCTGGTGAGTCGTGATGGCATGAATATTGTCCTGA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCAGGACAATATTCATaGCATCACGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSGQYS*HHDSPE
Trigger: CTCTGGTGAGTCGTGATGGCATGAATATTGTCCTGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCCCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGAGGAAAAGACACCCTaGCGCACGTGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHEEKTP*RTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAACAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRAGGSQSWAASDIARREQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CACTCCCCTTCTGTAGCTGGAGTACTTTGTCCCTCAGGGACTCATCCAACTGGTATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HSPSVAGVLCPSGTHPTGIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...ACCAGTTGGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHLAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCCAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: SCAESITATIMFSSSPLLQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACACCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR GCA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCACACACTGAGTCTCTaGTCTCATCCTAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVHTLSL*SHPSLS
Trigger: AGATAAGCTAGGATGAGAGCAGAGACTCAGTGTGTG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGAGACTCCTTTCTGAATaGTTGTGGCATCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGRLLSE*LWHLPH
Trigger: ATGGGGCAGATGCCACAAGCATTCAGAAAGGAGTCT...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACACAATTCTGTGAAACTTaGCTCTGGGACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTQFCET*LWDSLG
Trigger: GCCCAGGGAGTCCCAGAGGCAAGTTTCACAGAATTG...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACACAGGGAGTGGATGGATaGACAGTCCTAGATATCGGG +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTQGVDG*TVLDIG
Trigger: CCCGATATCTAGGACTGTCCATCCATCCACTCCCTG...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAAGGTCAGGGAGTGGATaGATGGACAGTCCTAGATAT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGRSGSG*MDSPRY
Trigger: ATATCTAGGACTGTCCATCCATCCACTCCCTGACCT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCCCTCTAACTCATCCTTaGCATCCAAACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSPLTHP*HPNWLK
Trigger: TTTCAACCAGTTTGGATGCCAAGGATGAGTTAGAGG...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCGACAGGTACTGGCGCTaGAACCAATCTTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICDRYWR*NQSWYR
Trigger: GCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTC...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCCTGTAGGCAGGAAGCAAGGACAGACAGCTGCTCCGAGTCAAAGTCTTCCTCCGACAGGTACTGGCGCTaGAACCAATCTTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: SCRQEARTDSCSESKSSSDRYWR*NQSWYR
Trigger: GCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTC...GGAGGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGCTTCCTGCCTACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGGGGATTATGGTCTCCAGGGGAATATTGTGGGCCAGAAAGAGCTGCCAGGCACGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: WGLWSPGEYCGPERAARHGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...GTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCAAAACAAAGCCAGCTTaGCATTGGAGGCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGKTKPA*HWRQRH
Trigger: ATGTCGCTGCCTCCAATGCCAAGCTGGCTTTGTTTT...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLRFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVRFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQRFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: AADCPSAPGSAPESAGPAGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...AGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGATCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGCTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKLRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAACTGCGGCGGCTTTGCTaGCCCTCAGGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRAGGSQSWAASDIARRELRRLC*PSGSRA
Trigger: TGCTCTACTACCTGAGGGCCAGCAAAGCCGCCGCAG...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLSRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTCGTCACAGCTCGCTTaGACATGCTGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLSSQLA*TCCSAW
Trigger: CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCATCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATAGCAGTGTGAGGGGCTaGAGGCCCCAGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LILIRHMVVHLHGNWLLNSSVRG*RPQEEG
Trigger: TCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCT...ATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACCAGGGCACACCACGTaGGGCTGTGGCCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAPGHTT*GCGHPF
Trigger: GAAAGGGTGGCCACAGCCCCACGTGGTGTGCCCTGG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCATGCTCTAGACAAAAGTaGGGGCAGAACAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPCSRQK*GQNRKG
Trigger: TCCCTTCCTGTTCTGCCCCCACTTTTGTCTAGAGCA...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCAGACAGATCAGTGCCTaGCTCCCACCTCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSRQISA*LPPPVA
Trigger: TGCCACTGGAGGTGGGAGCCAGGCACTGATCTGTCT...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCAGCACCGTCTACACTaGACGCCGAGGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVQHRLH*TPRVEG
Trigger: GCCTTCCACCCTCGGCGTCCAGTGTAGACGGTGCTG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
3UTR CAA 72 bp TTGCGAGGCAGGCTGTTGTTCTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGCTCGTCATGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LRGRLLFLMSRD*MCSASSSSCFM
Trigger: CATGAAACATGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
3UTR CAA 72 bp ACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTaGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: TEFHLVGFVTAR*DMLQRLENWRL
Trigger: CAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCCATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGACGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCT +
Preference number: 4 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRRDVLD*RSCRIP
Trigger: AGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCG...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACCGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCT +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHRDVLD*RSCRIP
Trigger: AGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCG...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GCCAGAAAGAGCTGCCAGGCACAATACTGCTCAAAGGTCTCCCAGTCTAGGCTCTGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: ARKSCQAQYCSKVSQSRLWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...GAGCCTAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTCTTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: KRSLNFILWASSQLAWTCSGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp TTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: LSRRLSKCSRICSRVSWASFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCACTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVEILFIVTEGCLCIVIALESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCCTGTAGGCAGGAAGCAAGGACAGACAGCTGCTCCGAGTCAAAGTCTTCCTCCGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SCRQEARTDSCSESKSSSGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...GGAGGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGCTTCCTGCCTACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACATTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNIAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTGCAGGATGCTGGTGGTaGACTGGTCGTCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACAGCWW*TGRQDG
Trigger: GCCATCCTGACGACCAGTTCACCACCAGCATCCTGC...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FRRLLGGLVEESSYSSARGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCACTTCCACTATGGTCTaGTTTTACAGAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLTSTMV*FYRASG
Trigger: GCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGT...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTGGCTCTGGTGTAGATTaGGGTGCCAACCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: AESITATIMFSSSPLLKVGSGVD*GANLRP
Trigger: TGGTCTGAGGTTGGCACCTCAATCTACACCAGAGCC...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTGTTTCTTGAGAAATaGGTAAGGACAGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLFLEK*VRTGLI
Trigger: GATGAGGCCTGTCCTTACTCATTTCTCAAGAAACAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCAGGCAGATTTCTTCATaGTGGGGGAGGCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDARQISS*WGRPLH
Trigger: GTGCAAAGGCCTCCCCCAGCATGAAGAAATCTGCCT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGTAACATCTCCACCTaGAATCTGCTTCATAAACGT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAACNIST*NLLHKR
Trigger: ACGTTTATGAAGCAGATTGCAGGTGGAGATGTTACA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGGACCCACTCCCTTTaGTCTGTCAGGATATCCAGA +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPARTHSL*SVRISR
Trigger: TCTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCT...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCACCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCCCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TWSTISCMTSHWASVSLPPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSGFMEW*MTRMAG
Trigger: ACCAGCCATCCTGGTCATGCACCACTCCATGAAGCC...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGAGGAAAAGACACCCTaGCGCACGTGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLEEKTP*RTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: FFRLRGLDRAAFRRLLGGSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...GCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AESITATIMFSSSPLLKVDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTAGGGCTGGACAGAGCTaGTTTTCGCCGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNIRAGQS*FSPALG
Trigger: CCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCT...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGGGGCTAGGGGCTaGATGGCAGCTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLEGARG*MAASQT
Trigger: AGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTC...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGGCTTATCTGGCCAGCTaGCCCTTTGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NFILWASSQLAWTCCSAWAYLAS*PFVISL
Trigger: AAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGC...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTAGACCAAGCTATACATaGACGGGGCAAATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSRPSYT*TGQMPA
Trigger: TGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCACCTTCTGCAACTCCATaGCTGCAGCCAGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAPSATP*LQPGAG
Trigger: CCCGGCTCCTGGCTGCAGCCATGGAGTTGCAGAAGG...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCTTGGCATCCAAACTaGTTGAAAGTAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTPWHPN*LKVAAS
Trigger: GGAGGCTGCTACTTTCAACCAGTTTGGATGCCAAGG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCCTCTAACTCATCCTTaGCATCCAAACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVPLTHP*HPNWLK
Trigger: TTTCAACCAGTTTGGATGCCAAGGATGAGTTAGAGG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGACAGGTACTGGCGCTaGAACCAATCTTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRDRYWR*NQSWYR
Trigger: GCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTC...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CACTCCCCTTCTGTAGCTGGAGTACTTTGTCCCTCAGGGACTCATCCAACTGGTAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: HSPSVAGVLCPSGTHPTGKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...ACCAGTTGGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGAAAACAAAGCCAGCTTaGCATTGGAGGCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVKTKPA*HWRQRH
Trigger: ATGTCGCTGCCTCCAATGCCAAGCTGGCTTTGTTTT...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCATGACCAGGATGGCTaGTTCTATGTTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPHDQDG*FYVHNA
Trigger: AGCATTATGAACATAGAACCAGCCATCCTGGTCATG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGCAGTGATGGCTGGGTaGGGCTTCATGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVAVMAG*GFMEWC
Trigger: GCACCACTCCATGAAGCCCCACCCAGCCATCACTGC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCCTCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCACCTCCCCTCGAAAGTaGGCCTTGAAGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLHNCLLDRVEAKLPLLSTSPRK*ALKSSC
Trigger: ACAGGAGCTCTTCAAGGCCCACTTTCGAGGGGAGGT...GGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TACAGAGGCTTTCCTACAGACTCCTCCAGGGACTCCTCAGTAATCTCCTCAGGCTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: YRGFPTDSSRDSSVISSGWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...GCCTGAGGAGATTACTGAGGAGTCCCTGGAGGAGTCTGTAGGAAAGCCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGTGGCAGACCAGCTCCTaGAGCTGTGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRWQTSS*SCAESI
Trigger: TATTGACTCTGCACAGCTCCAGGAGCTGGTCTGCCA...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCGCCGGCTCTTGGGTaGCTTGGTGGAAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSPALG*LGGRVL
Trigger: GAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDATLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSLLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATAGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: CSLYLRCCRMGIMVSRGIGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCATGCCCATTTCACACTaGCATGTGGATAGTGACTAT +
Preference number: 4 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISMPISH*HVDSDY
Trigger: ATAGTCACTATCCACATGCCAGTGTGAAATGGGCAT...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCGGACTCCCTGGGCTCTaGTGTAGATTGAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSGLPGL*CRLRCQ
Trigger: TTGGCACCTCAATCTACACCAGAGCCCAGGGAGTCC...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGGACTCCCTGGGCTCTaGTGTAGATTGAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHGLPGL*CRLRCQ
Trigger: TTGGCACCTCAATCTACACCAGAGCCCAGGGAGTCC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACACACAGACTTCAACTaGAGGATGACAGACCTTTTG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAHTDFN*RMTDLL
Trigger: CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCTTGGACTATCAACTaGCTAAGCTACGGACAACTT +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVSWTIN*LSYGQL
Trigger: AAGTTGTCCGTAGCTTAGCCAGTTGATAGTCCAAGA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAACATGGCCCAGCAAGTaGCCACACTTTGAATCACCA +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTTWPSK*PHFESP
Trigger: TGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGT...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
3UTR CAA 72 bp TCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTGTCTTCCTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SEPTAEDPFRFR*VGFGFVSSSSE
Trigger: TTCAGAAGAGGAAGACACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCAAACAGCCATGGCAATaGGGATGCTGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAKQPWQ*GCCSSG
Trigger: TCCTGAAGAGCAGCATCCTCATTGCCATGGCTGTTT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTGCTGTAGGATACCTGTaGACTGAGGACTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSAVGYL*TEDSRP
Trigger: AGGCCTTGAGTCCTCAGTTCACAGGTATCCTACAGC...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCGCTGTAGGATACCTGTaGACTGAGGACTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QIKTKLYMHGANASRHSSAVGYL*TEDSRP
Trigger: AGGCCTTGAGTCCTCAGTTCACAGGTATCCTACAGC...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTCACAGCGCAGAGACTaGCTATCTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHSQRRD*LSGVDR
Trigger: CCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTCACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: AESITATIMFSSSPLLKVHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCATCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEASGANQ*WPTGAR
Trigger: TCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGA...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGTCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLSWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHSWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTCTCGAAAGTGGGCCTTaGAGAGCTCCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNILESGP*RAPVGR
Trigger: CCTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAG...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCATCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 4 (lower is better)
Translates to: LILIRHMVVHLHGNWLLNKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...ATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 4 (lower is better)
Translates to: EGCLCIVIATLILIRHMVKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAAGCATCTTGTTTCTTaGGAAATGAGTAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPKHLVS*EMSKDR
Trigger: CCTGTCCTTACTCATTTCTCAAGAAACAAGATGCTT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCATATGCCCAGCAGTCTaGGGTAGAGCCAATACTTTT +
Preference number: 4 (lower is better)
Translates to: TWSTISCMTSHWASVSLPICPAV*GRANTF
Trigger: AAAAGTATTGGCTCTACCTCAGACTGCTGGGCATAT...GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTATATGCCCAGCAGTCTaGGGTAGAGCCAATACTTTT +
Preference number: 4 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPICPAV*GRANTF
Trigger: AAAAGTATTGGCTCTACCTCAGACTGCTGGGCATAT...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACACCAAAAGGCCGCGCCTaGGTTGGGGGCGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATPKGRA*VGGEGT
Trigger: TGTGCCTTCGCCCCCAACGCAGGCGCGGCCTTTTGG...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTATCCAGAACACTTTCTaGCAACCAGATATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVIQNTF*QPDIFG
Trigger: GCCAAAAATATCTGGTTGGCAGAAAGTGTTCTGGAT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGTCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCAGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACCAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: GEEITEFHLVGFVTARLDQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...GTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATACAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: CSLYLRCCRMGIMVSRGIQLAWT*CSAWRI
Trigger: AATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTG...TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTTTGAATCACCAACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TLLCWFTWPSKWPHFESPTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...TGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
CDS-3UTR GCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAAGACTCCTTTCTGAATaGTTGTGGCATCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTRLLSE*LWHLPH
Trigger: ATGGGGCAGATGCCACAAGCATTCAGAAAGGAGTCT...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAAGGTCAGGGAGTGGATaGATGGACAGTCCTAGATAT +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTRSGSG*MDSPRY
Trigger: ATATCTAGGACTGTCCATCCATCCACTCCCTGACCT...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAAAAACAAAGCCAGCTTaGCATTGGAGGCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTKTKPA*HWRQRH
Trigger: ATGTCGCTGCCTCCAATGCCAAGCTGGCTTTGTTTT...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACATGACCAGGATGGCTaGTTCTATGTTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGHDQDG*FYVHNA
Trigger: AGCATTATGAACATAGAACCAGCCATCCTGGTCATG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCATGGGGCTTCATGGAGTaGTGCATGACCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPWGFME*CMTRMA
Trigger: AGCCATCCTGGTCATGCACCACTCCATGAAGCCCCA...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TACAGAGGCTTTCCTACAGACTCCTCCAGGGACTCCTCAGTAATCTCCTCAGGCAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: YRGFPTDSSRDSSVISSGRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...GCCTGAGGAGATTACTGAGGAGTCCCTGGAGGAGTCTGTAGGAAAGCCTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCCTCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLHNCLLDRVEAKLPLLSLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...GGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: KRSLNFILWASSQLAWTCCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCCCAGCTGGGTAGCCTaGGCAAATGACTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHPSWVA*ANDSYR
Trigger: CCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGG...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCGCACATCGTCCTCCTaGCAGGCCTTCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVRTSSS*QAFMSI
Trigger: GATGGACATGAAGGCCTGCCAGGAGGACGATGTGCG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGACCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATCCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAATTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SRAGGSQSWAASDIARRELPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGAACTGGTCGTCAGGATaGCAGGGCCGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILNWSSG*QGRLST
Trigger: GGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTT...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTATGCTGGTGGTGAACTaGTCGTCAGGATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFMLVVN*SSGWQG
Trigger: GCCCTGCCATCCTGACGACCAGTTCACCACCAGCAT...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCTTTGTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: STTVSLIGWKRNSLFFPLCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...CAAAGGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATAACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CSLYLRCCRMGIMVSRGITCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLTCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCACTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLTLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHTLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ATCCAACTGGTCAAGGTAAGGGGTGATATCAACTGGCTCCTCCACAACTGTCTCCTTCTGAAGCACTGCTaGAGCCCGACTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: IQLVKVRGDINWLLHNCLLLKHC*SPTLLR
Trigger: CCGAAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAG...GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCTTACCTTGACCAGTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATCCACCGGGGGAGCTTaGGGATGCAGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTASTGGA*GCSKGV
Trigger: AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGGCTCTTTGGGAGACTaGGGGAGGAGATTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVGSLGD*GRRLRK
Trigger: CTTCCGCAATCTCCTCCCCCAGTCTCCCAAAGAGCC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTTTTCACACTGGCATGTaGATAGTGACTATAAAACGT +
Preference number: 4 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAFHTGM*IVTIKR
Trigger: ACGTTTTATAGTCACTATCCACATGCCAGTGTGAAA...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCAGGCTCCCACCTCCAGTaGCAGCAGGAAGGATGGGTA +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAGSHLQ*QQEGWV
Trigger: TACCCATCCTTCCTGCTGCCACTGGAGGTGGGAGCC...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGACTGGACGCCGAGGGTaGAAGGCATACAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLTGRRG*KAYSSA
Trigger: AGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTGGAGAATTGGCGTCTaGCTAAAAACTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDWRIGV*LKTRGR
Trigger: TCTTCCTCTAGTTTTTAGCCAGACGCCAATTCTCCA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGGAGAATTGGCGTCTaGCTAAAAACTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAWRIGV*LKTRGR
Trigger: TCTTCCTCTAGTTTTTAGCCAGACGCCAATTCTCCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTGTCTTTGTAATACGATaGCAGGAGAGAAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPVFVIR*QERNSS
Trigger: AGAGGAATTTCTCTCCTGCCATCGTATTACAAAGAC...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGTCTTTGTAATACGATaGCAGGAGAGAAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSASSSSCFMHQCRRMLVVFVIR*QERNSS
Trigger: AGAGGAATTTCTCTCCTGCCATCGTATTACAAAGAC...CACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTTTGAATCACCAACATGGCCCAGCAAGTaGCCACACTTTGAATCACCA +
Preference number: 4 (lower is better)
Translates to: TLLCWFTWPSKWPHFESPTWPSK*PHFESP
Trigger: TGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGT...TGGTGATTCAAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: CSLYLRCCRMGIMVSRGISWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACACAGGTGGGGAGGGTaGGCTGCAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAHRWGG*AAELRK
Trigger: TTTCCTGAGTTCTGCAGCTCACCCTCCCCACCTGTG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: IVTEGCLCIVIATLILIRLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...TCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: RKLLLPPGELGDAARVFPLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCTTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTTTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: GWTELLFAGSWVAWWKSPLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...AGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCTTTGGGTGCTCCTTGTATTTaGGGTGCTGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: STTVSLIGWKRNSLFFPLGAPCI*GAAGWG
Trigger: TCCCCATCCTGCAGCACCTCAAATACAAGGAGCACC...CAAAGGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp CTCCTCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCTTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LLHNCLLDRVEAKLPLLSFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...GGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLWCWSG*AADCPS
Trigger: ACTTGGACAATCTGCGGCTCAACCTGACCAACACCA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGTGGCATCTGCCCCATaGTTAGGAATGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVVASAP*LGMDTL
Trigger: CAGGGTGTCCATTCCTAATCATGGGGCAGATGCCAC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCGGAAATGGGATCATTTaGCAATTCTGTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSGNGII*QFCETC
Trigger: GCAAGTTTCACAGAATTGTCAAATGATCCCATTTCC...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGGAAATGGGATCATTTaGCAATTCTGTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGGNGII*QFCETC
Trigger: GCAAGTTTCACAGAATTGTCAAATGATCCCATTTCC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGTTGTTTCTTGAGAAATaGGTAAGGACAGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKLFLEK*VRTGLI
Trigger: GATGAGGCCTGTCCTTACTCATTTCTCAAGAAACAA...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTTCAGGACAATATTCATaGCATCACGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSSGQYS*HHDSPE
Trigger: CTCTGGTGAGTCGTGATGGCATGAATATTGTCCTGA...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCTCCACCTGCAATCTaGTTCATAAACGTCATACAA +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGSPPAI*FINVIQ
Trigger: TTGTATGACGTTTATGAAGCAGATTGCAGGTGGAGA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGTAACATCTCCACCTaGAATCTGCTTCATAAACGT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGCNIST*NLLHKR
Trigger: ACGTTTATGAAGCAGATTGCAGGTGGAGATGTTACA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAATCCAGAACACTTTCTaGCAACCAGATATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAIQNTF*QPDIFG
Trigger: GCCAAAAATATCTGGTTGGCAGAAAGTGTTCTGGAT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCATGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGCAGGTTCATCTTCCCTaGGGCGGCTTTGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMQVHLP*GGFAGP
Trigger: AGGGCCAGCAAAGCCGCCGCAGGGAAGATGAACCTG...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGATCATCAGGCAGGTGTaGAGATCGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVIIRQV*RSPSWV
Trigger: TACCCAGCTGGGCGATCTGCACACCTGCCTGATGAT...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCATCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPASLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCGACAGGGCCTCTGGGTaGTCCTTGTATTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KRSLNFILWASSQLAWTCDRASG*SLYLRC
Trigger: GCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTC...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCATCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LILIRHMVVHLHGNWLLNKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...ATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTALAWTC*SAWRIG
Trigger: GCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCACCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCCTCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LLHNCLLDRVEAKLPLLSTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...GGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCACACACTGAGTCTCTaGTCTCATCCTAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSHTLSL*SHPSLS
Trigger: AGATAAGCTAGGATGAGAGCAGAGACTCAGTGTGTG...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGAGACTCCTTTCTGAATaGTTGTGGCATCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQRLLSE*LWHLPH
Trigger: ATGGGGCAGATGCCACAAGCATTCAGAAAGGAGTCT...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATAAGCCAAGTCCCTTCTaGTCTAGACAAAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHKPSPF*SRQKWG
Trigger: CCCCCACTTTTGTCTAGAGCAGAAGGGACTTGGCTT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTGGTAGGAAACCTTCCTaGCTGATGCCCCAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACGRKPS*LMPQGL
Trigger: CAAGCCTTGGGGCATCAGCCAGGAAGGTTTCCTACC...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAAGCAGTTCAAATTCTaGTATCCTAGCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: SARGESSSFHRGSLGMQQKQFKF*YPSNIL
Trigger: CAGAATGTTGCTAGGATACCAGAATTTGAACTGCTT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGAAGCAGTTCAAATTCTaGTATCCTAGCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: AFMSIIRQVCRSPSWVAWKQFKF*YPSNIL
Trigger: CAGAATGTTGCTAGGATACCAGAATTTGAACTGCTT...CCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTAAGCAGTTCAAATTCTaGTATCCTAGCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVKQFKF*YPSNIL
Trigger: CAGAATGTTGCTAGGATACCAGAATTTGAACTGCTT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLKPAWH*RQRHLT
Trigger: CGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTATGGGGCTTCATGGAGTaGTGCATGACCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: DHVQQLSAPQGFIWKLCVWGFME*CMTRMA
Trigger: AGCCATCCTGGTCATGCACCACTCCATGAAGCCCCA...TACACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTTGGGGCTTCATGGAGTaGTGCATGACCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFWGFME*CMTRMA
Trigger: AGCCATCCTGGTCATGCACCACTCCATGAAGCCCCA...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATACTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CSLYLRCCRMGIMVSRGILPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: EGCLCIVIATLILIRHMVCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCCCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: TWSTISCMTSHWASVSLPPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNITCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCTTTTCGCCGGCTCTTaGGTGGCTTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFLFAGS*VAWWKS
Trigger: ACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAG...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTTTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATTTCGACTTCGAGGGCTaGACAGAGCTGCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHFDFEG*TELLFA
Trigger: GGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAA...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGGGCTAGGGGCTGCATaGCAGCTTCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAGLGAA*QLLKLS
Trigger: GCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCAAACAATCAGATGTCTaGGAGCTTATTAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSKQSDV*ELIKQH
Trigger: GTGCTGTTTAATAAGCTCCCAGACATCTGATTGTTT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
3UTR CAA 72 bp GGGGTGATATCAACTGGCTCCTCCACAACTGTCTCCTaGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GVISTGSSTTVS*IGWKRNSLFFP
Trigger: AGGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGAGGAGCCAGTTGATATCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGAAACAGCCATGGCAATaGGGATGCTGCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLKQPWQ*GCCSSG
Trigger: TCCTGAAGAGCAGCATCCTCATTGCCATGGCTGTTT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000512605.4
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCACATGGTGGTCCACGATaGGGCGGAGGTACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAHGGPR*GGGTCK
Trigger: TTTACACGTACCTCCGCCTCATCGTGGACCACCATG...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTGCTGTAGGATACCTGTaGACTGAGGACTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACAVGYL*TEDSRP
Trigger: AGGCCTTGAGTCCTCAGTTCACAGGTATCCTACAGC...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCT +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSRDVLD*RSCRIP
Trigger: AGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCTGACTATCTGGAGTTaGCAGGTACTGGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVLTIWS*QVLALE
Trigger: TTCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATTCACAGCGCAGAGACTaGCTATCTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHSQRRD*LSGVDR
Trigger: CCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGA...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCATGGAGTGGTGCATaGCCAGGATGGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSWSGA*PGWLVL
Trigger: TAGAACCAGCCATCCTGGTCATGCACCACTCCATGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATACTTCCACTATGGTCTaGTTTTACAGAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHTSTMV*FYRASG
Trigger: GCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAAAGGGGCCAGGGGGCTaGGGACTTCCACTATGGTCT +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATKGPGG*GLPLWS
Trigger: AGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTT...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp TCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCTTTGGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: STTVSLIGWKRNSLFFPLEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...CAAAGGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCAGGCTCTGGTGTAGATTaGGGTGCCAACCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAGSGVD*GANLRP
Trigger: TGGTCTGAGGTTGGCACCTCAATCTACACCAGAGCC...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGGCTCTGGTGTAGATTaGGGTGCCAACCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAGSGVD*GANLRP
Trigger: TGGTCTGAGGTTGGCACCTCAATCTACACCAGAGCC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTGGAAATGGGATCATTTaGCAATTCTGTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGGNGII*QFCETC
Trigger: GCAAGTTTCACAGAATTGTCAAATGATCCCATTTCC...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLLLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TACAGAGGCTTTCCTACAGACTCCTCCAGGGACTCCTCAGTAATCTCCTCAGGCGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: YRGFPTDSSRDSSVISSGEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...GCCTGAGGAGATTACTGAGGAGTCCCTGGAGGAGTCTGTAGGAAAGCCTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LIFLRQGEEITEFHLVGFQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...GAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTCAGCTCCTGGAGCTGTaGAGAGTCAATAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LFIVTEGCLCIVIATLILQLLEL*RVNNSH
Trigger: GTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCTG...AAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CTCATCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTGTTTCATGCACCAGTaGCGCAGGATGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LILIRHMVVHLHGNWLLNCFMHQ*RRMLVV
Trigger: CACCACCAGCATCCTGCGGCACTGGTGCATGAAACA...ATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TTGAGAACTGAGTCTTTTCGAAACATAACCAGGTTACCCATCATCACGTGGCAGAAGTGCTCCAGGATCTaGTCCAGAGTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRTESFRNITRLPIITWQKCSRI*SRVSWA
Trigger: GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTT...CTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGACTCAGTTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IVTEGCLCIVIATLILIRRRLSK*SRICSR
Trigger: TCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCG...TCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTCCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGAAGCCAAGTCCCTTCTaGTCTAGACAAAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLKPSPF*SRQKWG
Trigger: CCCCCACTTTTGTCTAGAGCAGAAGGGACTTGGCTT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTACGGGGGATGGTTCTaGATAGACAGATCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLYGGWF*IDRSVP
Trigger: AGGCACTGATCTGTCTATGCAGAACCATCCCCCGTA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGGGCTCCGAAGTACAGTaGGGTAAAGGCCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQGSEVQ*GKGLCP
Trigger: GGGACACAGGCCTTTACCCCACTGTACTTCGGAGCC...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTCAGGGAGTGGATGGATaGACAGTCCTAGATATCGGG +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACQGVDG*TVLDIG
Trigger: CCCGATATCTAGGACTGTCCATCCATCCACTCCCTG...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAAGCAGTTCAAATTCTaGTATCCTAGCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAKQFKF*YPSNIL
Trigger: CAGAATGTTGCTAGGATACCAGAATTTGAACTGCTT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATAAAACAAAGCCAGCTTaGCATTGGAGGCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHKTKPA*HWRQRH
Trigger: ATGTCGCTGCCTCCAATGCCAAGCTGGCTTTGTTTT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACATGACCAGGATGGCTaGTTCTATGTTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTHDQDG*FYVHNA
Trigger: AGCATTATGAACATAGAACCAGCCATCCTGGTCATG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATCATGACCAGGATGGCTaGTTCTATGTTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHHDQDG*FYVHNA
Trigger: AGCATTATGAACATAGAACCAGCCATCCTGGTCATG...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATGGGGCTTCATGGAGTaGTGCATGACCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAWGFME*CMTRMA
Trigger: AGCCATCCTGGTCATGCACCACTCCATGAAGCCCCA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTCTCCCCTTCTGTAGCTaGAGTACTTTGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACLPFCS*STLSLR
Trigger: CCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAG...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGTGCATGACCTCACACTaGGCCTCCGTATCACTCCCC +
Preference number: 4 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQCMTSH*ASVSLP
Trigger: GGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCA...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATTACCCATCATCACGTaGCAGACCAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTALPIIT*QTSSWS
Trigger: GCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTTCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNISRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGTGCTCCAGAGTCAGCTaGGCCAGCTTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQCSRVS*ASLLLE
Trigger: CTCTAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCA...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCAACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEATCCSA*RIGVWL
Trigger: TAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGT...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCACCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGATGCCCATTTCACACTaGCATGTGGATAGTGACTAT +
Preference number: 4 (lower is better)
Translates to: SVTVRAHCRGPFSFPLGRMPISH*HVDSDY
Trigger: ATAGTCACTATCCACATGCCAGTGTGAAATGGGCAT...CCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCATGCTCTAGACAAAAGTaGGGGCAGAACAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPCSRQK*GQNRKG
Trigger: TCCCTTCCTGTTCTGCCCCCACTTTTGTCTAGAGCA...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATGGCAGCAGGAAGGATaGGTAGTGGCCAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAWQQEG*VVAKAK
Trigger: CTTGGCTTTGGCCACTACCCATCCTTCCTGCTGCCA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACCGTTCCCGAAGCAGTaGGATGCAGAAGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAPFPKQ*DAEVYF
Trigger: GAAGTAGACTTCTGCATCTCACTGCTTCGGGAACGG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACACAGATGTAGCGAATaGGGTCACAGCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAHRCSE*GHSAET
Trigger: AGTCTCTGCGCTGTGACCTCATTCGCTACATCTGTG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TTGAGAACTGAGTCTTTTCGAAACATAACCAGGTTACCCATCATCACGTGGCAGCTGGCTCCTCAATTTTaGCTTCCACAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRTESFRNITRLPIITWQLAPQF*LPQVGR
Trigger: CCTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAG...CTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGACTCAGTTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGGTCAAGGTAAGGGGTaGTATCAACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAGQGKG*YQLAPP
Trigger: TGGAGGAGCCAGTTGATATCACCCCTTACCTTGACC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGAATCTTGGGCTGCTTCTaGTATAGCTCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IVTEGCLCIVIATLILIRILGCF*YSSERR
Trigger: CCTTCTCTCCGAGCTATATCAGAAGCAGCCCAAGAT...TCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGAGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: IVTEGCLCIVIATLILIRGSLGK*LVQVHL
Trigger: AAGATGAACCTGTACGAGTCATTTGCCCAGGCTACC...TCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: SIAKELSSAGSHGPASGHEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGATTTTCTCTTCGGAGTTaGAGCAGTAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: IVTEGCLCIVIATLILIRFSLRS*SSRQDR
Trigger: CCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAA...TCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTTCCACTATGGTCTaGTTTTACAGAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AVEILFIVTEGCLCIVIATSTMV*FYRASG
Trigger: GCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGT...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGAACAAACCAAGACCTaGAGGGGAAGCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAEQTKT*RGSRKG
Trigger: TCCCTTCCTGCTTCCCCTTCAGGTCTTGGTTTGTTC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATATCCAGAACACTTTCTaGCAACCAGATATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHIQNTF*QPDIFG
Trigger: GCCAAAAATATCTGGTTGGCAGAAAGTGTTCTGGAT...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCAATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTTGGTCCACAATTTCCTaGATGACCTCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: EGCLCIVIATLILIRHMVWSTIS*MTSHWA
Trigger: GGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCA...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAAGCAGGGACTTGATGTaGTCGGCCAGCAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATSRDLM*SASSSS
Trigger: TGACGAGCTGCTGGCCGAGCACATCAAGTCCCTGCT...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTASGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp CTCATCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATCCTCTTCTGAAGCACTaGTGGAGCCCGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LILIRHMVVHLHGNWLLNPLLKH*WSPTLL
Trigger: AAGAAGAGTCGGGCTCCAGCAGTGCTTCAGAAGAGG...ATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGCTTATCTGGCCAGCTaGCCCTTTGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVAYLAS*PFVISL
Trigger: AAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCACACACTGAGTCTCTaGTCTCATCCTAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: SSWSCAESITATIMFSSSHTLSL*SHPSLS
Trigger: AGATAAGCTAGGATGAGAGCAGAGACTCAGTGTGTG...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACACTGAGGGAAAGGCGTTaGCTCCGAAGTACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATLRERR*LRSTVG
Trigger: CCCCACTGTACTTCGGAGCCAACGCCTTTCCCTCAG...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AACCAGGTTACCCATCATCACGTGGCAGACCAGCTCCTGGAGCTGTGCAGAGTCAAGCAGTTCAAATTCTaGTATCCTAGCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: NQVTHHHVADQLLELCRVKQFKF*YPSNIL
Trigger: CAGAATGTTGCTAGGATACCAGAATTTGAACTGCTT...GACTCTGCACAGCTCCAGGAGCTGGTCTGCCACGTGATGATGGGTAACCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TACAGAGGCTTTCCTACAGACTCCTCCAGGGACTCCTCAGTAATCTCCTCAGGCCATGACCAGGATGGCTaGTTCTATGTTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: YRGFPTDSSRDSSVISSGHDQDG*FYVHNA
Trigger: AGCATTATGAACATAGAACCAGCCATCCTGGTCATG...GCCTGAGGAGATTACTGAGGAGTCCCTGGAGGAGTCTGTAGGAAAGCCTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSRFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHRFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LIFLRQGEEITEFHLVGFVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...GAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHRGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTTCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACATGCAGATCGCCCAGCTaGGTAGCCTGGGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATCRSPS*VAWAND
Trigger: GTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCA...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATCCAGGGGAATATTGTaGGCCAGAAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTASRGIL*ARKSCQ
Trigger: CTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGGCAGGACAGGGCCTCTaGGTGCTCCTTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILAGQGL*VLLVFE
Trigger: CTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCTCACCATCTCCTCGCTaGGCTTTTCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: LIFLRQGEEITEFHLVGFSPSPR*AFLFGV
Trigger: AACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGA...GAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: EGCLCIVIATLILIRHMVTLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCAACTCTTCTTCGGCATTaGGGGGCTGTGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEATLLRH*GAVWHS
Trigger: AGAATGCCACACAGCCCCCCAATGCCGAAGAAGAGT...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: SCAESITATIMFSSSPLLILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTTTTCACACTGGCATGTaGATAGTGACTATAAAACGT +
Preference number: 4 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPFHTGM*IVTIKR
Trigger: ACGTTTTATAGTCACTATCCACATGCCAGTGTGAAA...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCATGCCCATTTCACACTaGCATGTGGATAGTGACTAT +
Preference number: 4 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAMPISH*HVDSDY
Trigger: ATAGTCACTATCCACATGCCAGTGTGAAATGGGCAT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGCCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCAGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTACTTCCACTATGGTCTaGTTTTACAGAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACTSTMV*FYRASG
Trigger: GCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGT...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR TCA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACTTCAACTGGAGGATaGCAGACCTTTTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKTSTGG*QTFWKH
Trigger: ATGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGT...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCCCGAAGCAGTGAGATaGAGAAGTCTACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVPEAVR*RSLLPS
Trigger: AGAAGGAAGTAGACTTCTGCATCTCACTGCTTCGGG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACTTCTCTCTCAGCATTaGCCGCAGCTCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTALLSQH*PQLLIQ
Trigger: TTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp TTGAGAACTGAGTCTTTTCGAAACATAACCAGGTTACCCATCATCACGTGGCAGGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRTESFRNITRLPIITWQARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...CTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGACTCAGTTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGGCAAGGACAGACAGCTaGTCCGAGTCAAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILARTDS*SESKSS
Trigger: GGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGC...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTACQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCTCGTCATGTTTCATaGACCAGTGCCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATARHVS*TSAAGC
Trigger: GCATCCTGCGGCACTGGTGCATGAAACATGACGAGC...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGTCAGGCTCTGTCTCTTaGGAGGCAGGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMSGSVS*EAGCCS
Trigger: AGAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGA...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCAGCTTATCTGGCCAGCTaGCCCTTTGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAAYLAS*PFVISL
Trigger: AAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGC...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCACACACACTGAGTCTCTaGTCTCATCCTAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPHTLSL*SHPSLS
Trigger: AGATAAGCTAGGATGAGAGCAGAGACTCAGTGTGTG...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTAGACTCCTTTCTGAATaGTTGTGGCATCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNIRLLSE*LWHLPH
Trigger: ATGGGGCAGATGCCACAAGCATTCAGAAAGGAGTCT...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACCTTGGCATCCAAACTaGTTGAAAGTAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAPWHPN*LKVAAS
Trigger: GGAGGCTGCTACTTTCAACCAGTTTGGATGCCAAGG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGGGAGTTGACAGGTACTaGCGCTGGAACCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILGVDRY*RWNQSW
Trigger: CCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCC...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: KRSLNFILWASSQLAWTCVALQW*IEVGND
Trigger: ATCATTCCCAACTTCTATCCACCATTGGAGGGCCAC...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLRFSTM*LREEKT
Trigger: TGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACG...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATAGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: CSLYLRCCRMGIMVSRGIGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...TATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: AESITATIMFSSSPLLKVSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...AACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCAGTCTCCTTGATAGGGTaGAAGCGAAACTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEAVSLIG*KRNSLF
Trigger: GAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGAC...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAAGGGGTGATATCAACTaGCTCCTCCACAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTARGDIN*LLHNCL
Trigger: GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCT...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHLNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp CTCATCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATCCTTCTCTGTTGAAATaGCTCTTTGGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: LILIRHMVVHLHGNWLLNPSLLK*LFGRLG
Trigger: CCCCAGTCTCCCAAAGAGCCATTTCAACAGAGAAGG...ATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCATCCTACGGGGGATaGTTCTGCATAGACAGATCA +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSSYGG*FCIDRS
Trigger: TGATCTGTCTATGCAGAACCATCCCCCGTAGGATGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGTGCACACATACGCATTaGGGGCATCATTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMCTHTH*GHHWLL
Trigger: GAGAAGCCAATGATGCCCTCAATGCGTATGTGTGCA...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGTGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMWYRFC*PNRTRD
Trigger: ATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCA...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCCCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: KRSLNFILWASSQLAWTCPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCCGGGGCAAGATATCTaGACTCAGTACTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHPGQDI*TQYFIR
Trigger: TCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGG...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGGGAGAAGAGATCACTaGATTTCATCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVGRRDH*ISSCGL
Trigger: AAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR GCA 90 bp GATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTAGAAGTAGAGAGAAGCTaGTGTTGTCTTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: DHVQQLSAPQGFIWKLCVEVERS*CCLPAS
Trigger: AGATGCAGGAAGACAACAGCAGCTTCTCTCTACTTC...TACACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGTGCCAGGCACAATACTaGTCAAAGGTCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILCQAQY*SKVSQS
Trigger: AGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCA...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGATCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: IVTEGCLCIVIATLILIRSLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...TCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGACTGTCAGAGCCCACTaGAGAGGACCCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILTVRAH*RGPFSF
Trigger: AAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGT...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCCACACACTGAGTCTCTaGTCTCATCCTAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: KRSLNFILWASSQLAWTCHTLSL*SHPSLS
Trigger: AGATAAGCTAGGATGAGAGCAGAGACTCAGTGTGTG...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGAAGGCATACAGTTCTaGTTGGTGTTGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAEGIQF*LVLVRL
Trigger: CAACCTGACCAACACCAAGCAGAACTGTATGCCTTC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAAGGTCAGGGAGTGGATaGATGGACAGTCCTAGATAT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTARSGSG*MDSPRY
Trigger: ATATCTAGGACTGTCCATCCATCCACTCCCTGACCT...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCACCTCTAACTCATCCTTaGCATCCAAACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPPLTHP*HPNWLK
Trigger: TTTCAACCAGTTTGGATGCCAAGGATGAGTTAGAGG...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAATCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: SRAGGSQSWAASDIARRESLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp TTGAGAACTGAGTCTTTTCGAAACATAACCAGGTTACCCATCATCACGTGGCAGTCTTCCTCCAGGACCTaGTCCACAATTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LRTESFRNITRLPIITWQSSSRT*STISCM
Trigger: CATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGA...CTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGACTCAGTTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp ATCCAACTGGTCAAGGTAAGGGGTGATATCAACTGGCTCCTCCACAACTGTCTCCCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: IQLVKVRGDINWLLHNCLPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCTTACCTTGACCAGTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGCAGGATGGGGATTATaGTCTCCAGGGGAATATTGT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAAGWGL*SPGEYC
Trigger: ACAATATTCCCCTGGAGACCATAATCCCCATCCTGC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACTGAATTTCATCTTGTaGGCTTCGTCACAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTALNFIL*ASSQLA
Trigger: AGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGGGCTCTTGGGTGGCTTaGTGGAAGAGTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMGSWVA*WKSPHI
Trigger: AATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCC +
Preference number: 4 (lower is better)
Translates to: FTEPLASVRSQISLGTAVILATF*SSLTRS
Trigger: GGATCTCGTAAGACTACTTCAGAATGTTGCTAGGAT...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTGCCTCTATTAACCTTTaGATCACCAAGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EGCLCIVIATLILIRHMVASINL*ITKKER
Trigger: CCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGC...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGATCGTCACTGAAGGCTaGCTCTGCATTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMIVTEG*LCIVIA
Trigger: TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp CTCATCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTGTATTTGAGGTGCTaGAGGATGGGGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: LILIRHMVVHLHGNWLLNLYLRC*RMGIMV
Trigger: GACCATAATCCCCATCCTGCAGCACCTCAAATACAA...ATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATCCTTGTATTTGAGGTaGTGCAGGATGGGGATTATG +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTASLYLR*CRMGIM
Trigger: CATAATCCCCATCCTGCAGCACCTCAAATACAAGGA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATAAGCAGTTCAAATTCTaGTATCCTAGCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHKQFKF*YPSNIL
Trigger: CAGAATGTTGCTAGGATACCAGAATTTGAACTGCTT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp ATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATGACCAGGATGGCTaGTTCTATGTTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: IVTEGCLCIVIATLILIRHDQDG*FYVHNA
Trigger: AGCATTATGAACATAGAACCAGCCATCCTGGTCATG...TCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTCAGTGACGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGGTTGTCCATCTCCATaGAAACTGGCTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAGCPSP*KLAPQF
Trigger: AAATTGAGGAGCCAGTTTCCATGGAGATGGACAACC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGTCTTGGGTGGCTTGGTaGAAGAGTCCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMSWVAW*KSPHIP
Trigger: AGGAATATGAGGACTCTTCCACCAAGCCACCCAAGA...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATAAACAATCAGATGTCTaGGAGCTTATTAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHKQSDV*ELIKQH
Trigger: GTGCTGTTTAATAAGCTCCCAGACATCTGATTGTTT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR TCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGTCTTTCCTTTGCTGTTaGGATCCTCTTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMSFLCC*DPLHRH
Trigger: GTGACGATGAAGAGGATCTCAACAGCAAAGGAAAGA...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp ATCCAACTGGTCAAGGTAAGGGGTGATATCAACTGGCTCCTCCACAACTGTCTCTTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: IQLVKVRGDINWLLHNCLLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCTTACCTTGACCAGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR GCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTTGTAACATCTCCACCTaGAATCTGCTTCATAAACGT +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACCNIST*NLLHKR
Trigger: ACGTTTATGAAGCAGATTGCAGGTGGAGATGTTACA...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAATTTTACAGAGCCTCTaGCTTCAGTCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAILQSL*LQSDPK
Trigger: TTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAAT...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATCTTGGACTATCAACTaGCTAAGCTACGGACAACTT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTASWTIN*LSYGQL
Trigger: AAGTTGTCCGTAGCTTAGCCAGTTGATAGTCCAAGA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR TCA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATTTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHLSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR TCA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTGGAAATGGGATCATTTaGCAATTCTGTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: EGCLCIVIATLILIRHMVGNGII*QFCETC
Trigger: GCAAGTTTCACAGAATTGTCAAATGATCCCATTTCC...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR GCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATCTCCACCTGCAATCTaGTTCATAAACGTCATACAA +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTASPPAI*FINVIQ
Trigger: TTGTATGACGTTTATGAAGCAGATTGCAGGTGGAGA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGCCTCTAACTCATCCTTaGCATCCAAACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMPLTHP*HPNWLK
Trigger: TTTCAACCAGTTTGGATGCCAAGGATGAGTTAGAGG...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTAAGCAGTTCAAATTCTaGTATCCTAGCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACKQFKF*YPSNIL
Trigger: CAGAATGTTGCTAGGATACCAGAATTTGAACTGCTT...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGTCCTTATCCGACATATaGTTGTCCATCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: SLSDIWLSISMETGSSILSLSDI*LSISME
Trigger: TTCCATGGAGATGGACAACCATATGTCGGATAAGGA...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CCA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCCTCAAGGTTTCATCTaGAAACTCTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQPQGFI*KLCVDG
Trigger: TCCATCTACACAGAGTTTCCAGATGAAACCTTGAGG...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTALSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR TCA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCATTGTCTTCCTGCATCTaGCATAGGTTCCTAAATATT +
Preference number: 4 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEALSSCI*HRFLNI
Trigger: AATATTTAGGAACCTATGTCAGATGCAGGAAGACAA...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR GCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGTCTCCACCTGCAATCTaGTTCATAAACGTCATACAA +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMSPPAI*FINVIQ
Trigger: TTGTATGACGTTTATGAAGCAGATTGCAGGTGGAGA...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATTTCACACTGGCATGTaGATAGTGACTATAAAACGT +
Preference number: 4 (lower is better)
Translates to: DFTEPLASVRSQISLGTAFHTGM*IVTIKR
Trigger: ACGTTTTATAGTCACTATCCACATGCCAGTGTGAAA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAATGCCCATTTCACACTaGCATGTGGATAGTGACTAT +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATMPISH*HVDSDY
Trigger: ATAGTCACTATCCACATGCCAGTGTGAAATGGGCAT...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR TCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGGAGTATGTTGAGAACTaGGTCTTTTCGAAACATAAC +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMEYVEN*VFSKHN
Trigger: GTTATGTTTCGAAAAGACTCAGTTCTCAACATACTC...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR GCA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACATGTAACATCTCCACCTaGAATCTGCTTCATAAACGT +
Preference number: 4 (lower is better)
Translates to: REEGKRSLQWFRLSKEATCNIST*NLLHKR
Trigger: ACGTTTATGAAGCAGATTGCAGGTGGAGATGTTACA...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CCA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGTTTCACACTGGCATGTaGATAGTGACTATAAAACGT +
Preference number: 4 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMFHTGM*IVTIKR
Trigger: ACGTTTTATAGTCACTATCCACATGCCAGTGTGAAA...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGGAGTGCAGCGCCTTaGGATCCGGCCCCTAGGGGG +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAGSAAP*DPAPRG
Trigger: CCCCCTAGGGGCCGGATCCAAAGGCGCTGCACTCCC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGGGAGTGCAGCGCCTTaGGATCCGGCCCCTAGGGGG +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVGSAAP*DPAPRG
Trigger: CCCCCTAGGGGCCGGATCCAAAGGCGCTGCACTCCC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGGAGTGCAGCGCCTTaGGATCCGGCCCCTAGGGGG +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGSAAP*DPAPRG
Trigger: CCCCCTAGGGGCCGGATCCAAAGGCGCTGCACTCCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGAAGGCCGCGCCTGCGTaGGGGGCGAAGGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKKAAPA*GAKAQS
Trigger: GGACTGTGCCTTCGCCCCCAACGCAGGCGCGGCCTT...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VVRMAGPAQHHLHHLLAGLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...CCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTATCCCGAGTGTGGGTaGTGGCCCCGGGTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDYPECG*WPRVSC
Trigger: GCAGGACACCCGGGGCCACAACCCACACTCGGGATA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATATCCCGAGTGTGGGTaGTGGCCCCGGGTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGYPECG*WPRVSC
Trigger: GCAGGACACCCGGGGCCACAACCCACACTCGGGATA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS CCA 90 bp CCACACTTTGAATCACCAAGAAGGAGAGGGCAGTCCAGCCGGGGGTaGGATGGGGAATGCAGGGCCTCAGTCACTGTCAGAGCCCACTGC +
Preference number: 5 (lower is better)
Translates to: PHFESPRRRGQSSRG*DGECRASVTVRAHC
Trigger: GCAGTGGGCTCTGACAGTGACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTGCCCTCTCCTTCTTGGTGATTCAAAGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGCTGGGGGAGGCCTTaGCACACATACGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSCWGRP*HTYALR
Trigger: CCTCAATGCGTATGTGTGCAAAGGCCTCCCCCAGCA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTGGGCCAGCTTGCTGCTAGAGCTCCTCAGGCTCTGTCTCTTGCGAGGCAGGCTGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LGQLAARAPQALSLARQAASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...AGCCTGCCTCGCAAGAGACAGAGCCTGAGGAGCTCTAGCAGCAAGCTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSLMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGGGCTCTGGTGTAGATaGAGGTGCCAACCTCAGACC +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAGLWCR*RCQPQT
Trigger: GGTCTGAGGTTGGCACCTCAATCTACACCAGAGCCC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCGGGATCTCTGGATaGCCAGGGACTTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSIGISG*PGTSWL
Trigger: CAGCCAGGAAGTCCCTGGCAATCCAGAGATCCCGAT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTGGGAGTGCAGCGCCTTaGGATCCGGCCCCTAGGGGG +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSGSAAP*DPAPRG
Trigger: CCCCCTAGGGGCCGGATCCAAAGGCGCTGCACTCCC...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGAGGGAAAGGCGTaGGCTCCGAAGTACAGTGGG +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAAEGKA*APKYSG
Trigger: CCCACTGTACTTCGGAGCCAACGCCTTTCCCTCAGC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGCTGGGGGAGGCCTTaGCACACATACGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPCWGRP*HTYALR
Trigger: CCTCAATGCGTATGTGTGCAAAGGCCTCCCCCAGCA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCACAGGACCCACTCCCTTaGCTCTGTCAGGATATCCAG +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAQDPLP*LCQDIQ
Trigger: CTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCTG...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTGGAGGCAGCGACATTaGACGTGCACGTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGWRQRH*TCTLSG
Trigger: TCCTGACAACGTGCACGTCAAATGTCGCTGCCTCCA...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATGGAGGCAGCGACATTaGACGTGCACGTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAWRQRH*TCTLSG
Trigger: TCCTGACAACGTGCACGTCAAATGTCGCTGCCTCCA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTGGGCCAGCTTGCTGCTAGAGCTCCTCAGGCTCTGTCTCTTGCGAGGCAGGCTTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LGQLAARAPQALSLARQALRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...AGCCTGCCTCGCAAGAGACAGAGCCTGAGGAGCTCTAGCAGCAAGCTGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSLRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GSWVAWWKSPHIPPPGRRVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...TCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GGTTTCATCTGGAAACTCTGTGTAGATGGAGGGCGTGAGGTGGCACAGGAGCCGGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GFIWKLCVDGGREVAQEPVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...CGGCTCCTGTGCCACCTCACGCCCTCCATCTACACAGAGTTTCCAGATGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GCTCGGCCAGCAGCTCGTCATGTTTCATGCACCAGTGCCGCAGGATGCTGGTGGAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: ARPAARHVSCTSAAGCWWRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...CCACCAGCATCCTGCGGCACTGGTGCATGAAACATGACGAGCTGCTGGCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAARLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATCGGGATCTCTGGATaGCCAGGGACTTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQIGISG*PGTSWL
Trigger: CAGCCAGGAAGTCCCTGGCAATCCAGAGATCCCGAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS TCA 90 bp CATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTAGCCTGGGCAAATaGCTCGTACAGGTTCATCTTCCCTGCGGCGGCTTTGCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: HQAGVQIAQLGSLGK*LVQVHLPCGGFAAR
Trigger: TCTTGCAGCAAAGCCGCCGCAGGGAAGATGAACCTGTACGAGTCATTTGCCCAGGCTACCCAGCTGGGCGATCTGCACACCTGCCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS CCA 90 bp CATGGCTGCAGCCAGGAGCCGGGAAAAGGTCAGGGAGTGGATGGATaGACAGTCCTAGATATCGGGATCTCTGGATTGCCAGGGACTGGG +
Preference number: 5 (lower is better)
Translates to: HGCSQEPGKGQGVDG*TVLDIGISGLPGTG
Trigger: CCCAGTCCCTGGCAATCCAGAGATCCCGATATCTAGGACTGTCCATCCATCCACTCCCTGACCTTTTCCCGGCTCCTGGCTGCAGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000481797.5
ENST00000575952.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCTGATGCCCCAAGGCTaGGGGAGTGCAGCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSLMPQG*GSAAPL
Trigger: CAAAGGCGCTGCACTCCCCAAGCCTTGGGGCATCAG...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGAAGGCCGCGCCTGCGTaGGGGGCGAAGGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKKAAPA*GAKAQS
Trigger: GGACTGTGCCTTCGCCCCCAACGCAGGCGCGGCCTT...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTGGCATCCAAACTGGTaGAAAGTAGCAGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPWHPNW*KVAASP
Trigger: GGGGGAGGCTGCTACTTTCAACCAGTTTGGATGCCA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTGGCATCCAAACTGGTaGAAAGTAGCAGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVWHPNW*KVAASP
Trigger: GGGGGAGGCTGCTACTTTCAACCAGTTTGGATGCCA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGCATTGAGGGCATCATaGGCTTCTCTCTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAALRAS*ASLSET
Trigger: TGTCTCGGAGAGAGAAGCCAATGATGCCCTCAATGC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAGTAACACTTCTGGGCTaGGGCAGGTTCAGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAVTLLG*GRFSED
Trigger: ATCCTCACTGAACCTGCCCAAGCCCAGAAGTGTTAC...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCAGGACCCACTCCCTTaGCTCTGTCAGGATATCCAG +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVQDPLP*LCQDIQ
Trigger: CTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCTG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTGGAGGCAGCGACATTaGACGTGCACGTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVWRQRH*TCTLSG
Trigger: TCCTGACAACGTGCACGTCAAATGTCGCTGCCTCCA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATGGAGGCAGCGACATTaGACGTGCACGTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQWRQRH*TCTLSG
Trigger: TCCTGACAACGTGCACGTCAAATGTCGCTGCCTCCA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAATSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: TGRQDGRAGSAPSSPSPRTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...GCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACCACGTGGGGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: RLRCQPQTNLSLQGTPRGGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...CCCACGTGGTGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDLMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GGGCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLCGILSTSRAGQSCFSPLMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...CGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: LVVRMAGPAQHHLHHLLAKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...AGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSRLLGG*VEESSY
Trigger: ATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCATTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAACAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQQFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTG...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSQFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAACAGCACGCACAGGTaGTTTTATCCCGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAANSTHR*FYPECG
Trigger: CCCACACTCGGGATAAAACAACCTGTGCGTGCTGTT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCACGCTTCTTGGGCTaGGCTACAGTGCCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASRFLG*ATVPQK
Trigger: TTTCTGAGGCACTGTAGCCAAGCCCAAGAAGCGTGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS GCA 90 bp CAGCACCGTCTACACTGGACGCCGAGGGTGGAAGGCATACAGTTCTaGTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: QHRLHWTPRVEGIQF*LVLVRLSRRLSKCS
Trigger: GGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGTGTAGACGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CCA 90 bp ACTCCATGGCTGCAGCCAGGAGCCGGGAAAAGGTCAGGGAGTGGATaGATGGACAGTCCTAGATATCGGGATCTCTGGATTGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TPWLQPGAGKRSGSG*MDSPRYRDLWIARD
Trigger: GTCCCTGGCAATCCAGAGATCCCGATATCTAGGACTGTCCATCCATCCACTCCCTGACCTTTTCCCGGCTCCTGGCTGCAGCCATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
CDS CCA 90 bp CATGGCTGCAGCCAGGAGCCGGGAAAAGGTCAGGGAGTGGATGGATaGACAGTCCTAGATATCGGGATCTCTGGATTGCCAGGGACTTCC +
Preference number: 5 (lower is better)
Translates to: HGCSQEPGKGQGVDG*TVLDIGISGLPGTS
Trigger: GGAAGTCCCTGGCAATCCAGAGATCCCGATATCTAGGACTGTCCATCCATCCACTCCCTGACCTTTTCCCGGCTCCTGGCTGCAGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCAGGACCCACTCCCTTaGCTCTGTCAGGATATCCAG +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDQDPLP*LCQDIQ
Trigger: CTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCTG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATTGGTATCGCTTTTGTaGACCAAATCGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAALVSLL*TKSHPG
Trigger: TCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGCGCTGGAACCAATCTaGGTATCGCTTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSALEPI*VSLLLT
Trigger: GGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAACTGACTATCTGGAGTaGACAGGTACTGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQTDYLE*TGTGAG
Trigger: TCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCACTGACTATCTGGAGTaGACAGGTACTGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLTDYLE*TGTGAG
Trigger: TCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGT...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTACTGACTATCTGGAGTaGACAGGTACTGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: AADCPSAPGSAPESAGPATDYLE*TGTGAG
Trigger: TCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGT...AGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAAAAGCCAGCTTGGCATaGGAGGCAGCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQKASLA*EAATFD
Trigger: GTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTCACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: ELVVRMAGPAQHHLHHLLTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...GAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTGGAGTCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: SCMTSHWASVSLPFCSWSPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...ACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: FVTARLDMLQRLENWRLALRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SCAESITATIMFSSSPLLVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDARLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCATTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: RPPGRPSCPSSGRCADRPLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...TGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATCGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDRLLGG*VEESSY
Trigger: ATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCG...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCTGGGTCGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: RWAFLFGVEAVGRTGPLGRLLGG*VEESSY
Trigger: ATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCG...ACCCAGAGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGRLLGG*VEESSY
Trigger: ATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTGGAGTGGGCTCTGGTGTAGATaGAGGTGCCAACCTCAGACC +
Preference number: 5 (lower is better)
Translates to: SCMTSHWASVSLPFCSWSGLWCR*RCQPQT
Trigger: GGTCTGAGGTTGGCACCTCAATCTACACCAGAGCCC...ACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGGCATACAGTTCTGCTaGGTGTTGGTCAGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSGIQFC*VLVRLS
Trigger: GCTCAACCTGACCAACACCAAGCAGAACTGTATGCC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS TCA 90 bp CGCCGAGGGTGGAAGGCATACAGTTCTGCTTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: RRGWKAYSSAWCWSG*AADCPSAPGSAPES
Trigger: TGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS TCA 90 bp CCCACCAAATTCCTTACGCCAAGACCCGTTTCTCCACAATGTGGTTaGGGGAGGAAAAGACACCCTGCCGCACGTGGCCCTCCAATGGTG +
Preference number: 5 (lower is better)
Translates to: PTKFLTPRPVSPQCG*GRKRHPAARGPPMV
Trigger: CACCATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACGGGTCTTGGCGTAAGGAATTTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS GCA 90 bp CAGTTCTGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTaGTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: QFCLVLVRLSRRLSK*SRICSRVSWASLLL
Trigger: TAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CCA 90 bp CTTCAAGCATCCCCGAAGCAGGCTCCCGCTCTAAAACTGCTTTGCTaGCTCCAGATGCCCTGTGCTAATCTGCCTCATGTCCCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: LQASPKQAPALKLLC*LQMPCANLPHVPPN
Trigger: GTTGGGAGGGACATGAGGCAGATTAGCACAGGGCATCTGGAGCCAGCAAAGCAGTTTTAGAGCGGGAGCCTGCTTCGGGGATGCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS CCA 90 bp GTGGTTGAGGGAGGAAAAGACACCCTGCCGCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAATGATCTGGAAGCGAAGAAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: VVEGGKDTLPHVALQ*WIEVGNDLEAKKEG
Trigger: CCCCTCCTTCTTCGCTTCCAGATCATTCCCAACTTCTATCCACCATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCATTGAGGGCATCATaGGCTTCTCTCTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGALRAS*ASLSET
Trigger: TGTCTCGGAGAGAGAAGCCAATGATGCCCTCAATGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATTGCTGGGGGAGGCCTTaGCACACATACGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHCWGRP*HTYALR
Trigger: CCTCAATGCGTATGTGTGCAAAGGCCTCCCCCAGCA...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGTAACACTTCTGGGCTaGGGCAGGTTCAGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDVTLLG*GRFSED
Trigger: ATCCTCACTGAACCTGCCCAAGCCCAGAAGTGTTAC...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTGGTATCGCTTTTGTaGACCAAATCGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLVSLL*TKSHPG
Trigger: TCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTGGTATCGCTTTTGTaGACCAAATCGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPLVSLL*TKSHPG
Trigger: TCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTGCGCTGGAACCAATCTaGGTATCGCTTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVALEPI*VSLLLT
Trigger: GGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGC...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCGCGCTGGAACCAATCTaGGTATCGCTTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSALEPI*VSLLLT
Trigger: GGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGC...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCGCTGGAACCAATCTaGGTATCGCTTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQALEPI*VSLLLT
Trigger: GGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAACTGACTATCTGGAGTaGACAGGTACTGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGTDYLE*TGTGAG
Trigger: TCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCATGGAGGCAGCGACATTaGACGTGCACGTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: GQNRKGKGDVLRLQVGVPWRQRH*TCTLSG
Trigger: TCCTGACAACGTGCACGTCAAATGTCGCTGCCTCCA...TGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATAAAGCCAGCTTGGCATaGGAGGCAGCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDKASLA*EAATFD
Trigger: GTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAAAGCCAGCTTGGCATaGGAGGCAGCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAKASLA*EAATFD
Trigger: GTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATCGCCCAGCTGGGTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: PGRPSCPSSGRCADRPAGLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...CCCAGCTGGGCGATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: FVTARLDMLQRLENWRLATGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...AGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCTGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDACSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp AATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: NFILWASSQLAWTCCSAWGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...CCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCCTGTAGGCAGGAAGCAAGGACAGACAGCTGCTCCGAGTCAAAGTCTTCCTCCGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SCRQEARTDSCSESKSSSASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...GGAGGAAGACTTTGACTCGGAGCAGCTGTCTGTCCTTGCTTCCTGCCTACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICLMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGGGCCGGCTCAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGATTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: RAGSAPSSPSPRWAFLFGLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...TCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTGAGCCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TTTCGCCGGCTCTTGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGTTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: FRRLLGGLVEESSYSSARLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...CCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCGGCGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAASLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGTAGGCAGGACAGGGCCTCGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: SPRWAFLFGVEAVGRTGPRLLGG*VEESSY
Trigger: ATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCG...AGGCCCTGTCCTGCCTACTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGACCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GCAGGACAGGGCCTCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: AGQGLWVLLVFEVLQDGDPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...ATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGGCTCTGGTGTAGATaGAGGTGCCAACCTCAGACC +
Preference number: 5 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHGLWCR*RCQPQT
Trigger: GGTCTGAGGTTGGCACCTCAATCTACACCAGAGCCC...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGGGGCTCTGGTGTAGATaGAGGTGCCAACCTCAGACC +
Preference number: 5 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLGLWCR*RCQPQT
Trigger: GGTCTGAGGTTGGCACCTCAATCTACACCAGAGCCC...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAAACAGCACGCACAGGTaGTTTTATCCCGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDANSTHR*FYPECG
Trigger: CCCACACTCGGGATAAAACAACCTGTGCGTGCTGTT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS CCA 90 bp TTCCCCCACCAAATTCCTTACGCCAAGACCCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACACCCTGCCGCACGTGGCCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: FPHQIPYAKTRFSTM*LREEKTPCRTWPSN
Trigger: ATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACGGGTCTTGGCGTAAGGAATTTGGTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS-3UTR CAA 90 bp ACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCGCCAACCAGATATTTTaGGCTGTAACATCTCCACCT +
Preference number: 5 (lower is better)
Translates to: TQPEEKAPPSTGGAWGCSANQIF*AVTSPP
Trigger: AGGTGGAGATGTTACAGCCAAAAATATCTGGTTGGC...GCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCGCGCTGGAACCAATCTaGGTATCGCTTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LSRRLSKCSRICSRVSWAALEPI*VSLLLT
Trigger: GGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGC...GGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTTTCGTGACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: EPTAEDPFRFRLVGFGFVTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TACAGAGGCTTTCCTACAGACTCCTCCAGGGACTCCTCAGTAATCTCCTCAGGCCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: YRGFPTDSSRDSSVISSGPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...GCCTGAGGAGATTACTGAGGAGTCCCTGGAGGAGTCTGTAGGAAAGCCTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TGGGGATTATGGTCTCCAGGGGAATATTGTGGGCCAGAAAGAGCTGCCAGGCACTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: WGLWSPGEYCGPERAARHLRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...GTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCCTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SCAESITATIMFSSSPLLLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GCACATCGTCCTCCTGGCAGGCCTTCATGTCCATCATCAGGCAGGTGTGCAGATAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: AHRPPGRPSCPSSGRCADKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...ATCTGCACACCTGCCTGATGATGGACATGAAGGCCTGCCAGGAGGACGATGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGCTTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: AADCPSAPGSAPESAGPASLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...AGCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTRLLGG*VEESSY
Trigger: ATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: SIAKELSSAGSHGPASGHPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CAA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCTGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCACTCCTTTCTGAATGCTaGTGGCATCTGCCCCATGAT +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALLSEC*WHLPHD
Trigger: ATCATGGGGCAGATGCCACAAGCATTCAGAAAGGAG...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTCCCTCCTTTCTGAATGCTaGTGGCATCTGCCCCATGAT +
Preference number: 5 (lower is better)
Translates to: RGEEEQLCAVRPNFTPQSLLSEC*WHLPHD
Trigger: ATCATGGGGCAGATGCCACAAGCATTCAGAAAGGAG...GGACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS TCA 90 bp TGTCCATCCTTCCCCAGAGCTCAAAAGGGCTCCAACCACGATCAGTaGGTGAAGCTACTGCCGGATGAGAGTCAGGAACAGAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: CPSFPRAQKGSNHDQ*VKLLPDESQEQKRE
Trigger: CTCCCTCTTCTGTTCCTGACTCTCATCCGGCAGTAGCTTCACTCACTGATCGTGGTTGGAGCCCTTTTGAGCTCTGGGGAAGGATGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS CCA 90 bp GTTGAGGGAGGAAAAGACACCCTGCCGCACGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGATCTGGAAGCGAAGAAGGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VEGGKDTLPHVALQW*IEVGNDLEAKKEGK
Trigger: TTTCCCCTCCTTCTTCGCTTCCAGATCATTCCCAACTTCTATCCACCATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGCATTGAGGGCATCATaGGCTTCTCTCTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTALRAS*ASLSET
Trigger: TGTCTCGGAGAGAGAAGCCAATGATGCCCTCAATGC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATTGCACACATACGCATaGAGGGCATCATTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDALHTYA*RASLAS
Trigger: AGAAGCCAATGATGCCCTCAATGCGTATGTGTGCAA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTGCACACATACGCATaGAGGGCATCATTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGLHTYA*RASLAS
Trigger: AGAAGCCAATGATGCCCTCAATGCGTATGTGTGCAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGCCAACCAGATATTTTaGGCTGTAACATCTCCACCT +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQANQIF*AVTSPP
Trigger: AGGTGGAGATGTTACAGCCAAAAATATCTGGTTGGC...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACGCGCTGGAACCAATCTaGGTATCGCTTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: SIAKELSSAGSHGPASGHALEPI*VSLLLT
Trigger: GGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGC...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAACTGACTATCTGGAGTaGACAGGTACTGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTTDYLE*TGTGAG
Trigger: TCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGT...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TGGGTGGCTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACAAAGCCAGCTTGGCATaGGAGGCAGCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: WVAWWKSPHIPPPGRRDHKASLA*EAATFD
Trigger: GTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTT...GTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: LKLSQRRKLLLPPGELGDLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...ATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCTTGGGTGGCTTGGTGGTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: DFEGWTELLFAGSWVAWWLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...CCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGCTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TTCGGGGTGAAGAGGAGCAGCTCTGTGCAGTTCGCCCAAACTTCACTCCTCAGTTTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: FGVKRSSSVQFAQTSLLSLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...ACTGAGGAGTGAAGTTTGGGCGAACTGCACAGAGCTGCTCCTCTTCACCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACATTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: GNNSIAKELSSAGSHGPAKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...TGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGACCAGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: GKGDVLRLQVGVPIKSRPAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...TGGTCTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCAGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TGCTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: CLVLVRLSRRLSKCSRICPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACACCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000576030.5
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CAA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATTTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS TCA 90 bp TCAGGGGACACTGGGGAGTATGGCTGCAGAGAGAACTGGACTTCCTaGCCACTCCAGGCCACTCAAATGAGAAATTCTTACTGGACCTGG +
Preference number: 5 (lower is better)
Translates to: SGDTGEYGCRENWTS*PLQATQMRNSYWTW
Trigger: CCAGGTCCAGTAAGAATTTCTCATTTGAGTGGCCTGGAGTGGTCAGGAAGTCCAGTTCTCTCTGCAGCCATACTCCCCAGTGTCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS-3UTR CAA 90 bp AGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTGTGGAAGTTGCACACATACGCATaGAGGGCATCATTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RNSPLLVHMAQQVATLWKLHTYA*RASLAS
Trigger: AGAAGCCAATGATGCCCTCAATGCGTATGTGTGCAA...CTTCCACAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAGCCAACCAGATATTTTaGGCTGTAACATCTCCACCT +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGANQIF*AVTSPP
Trigger: AGGTGGAGATGTTACAGCCAAAAATATCTGGTTGGC...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GTGAACTGGTCGTCAGGATGGCAGGGCCGGCTCAGCACCATCTTCACCATCTCCATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: VNWSSGWQGRLSTIFTISIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...GGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCATCCTGACGACCAGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTGGTAGGCTTCGGTATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: LSEPTAEDPFRFRLVGFGILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...ACCGAAGCCTACCAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACAGCGCTGGAACCAATCTaGGTATCGCTTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTALEPI*VSLLLT
Trigger: GGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGC...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGACTGACTATCTGGAGTaGACAGGTACTGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRTDYLE*TGTGAG
Trigger: TCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGT...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCATTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: LSQRRKLLLPPGELGDAAFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...TGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCCGCTCCTCACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: SCAESITATIMFSSSPLLTSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...GAGGAGCGGAGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAATTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GCTGTGTGGCATTCTTTCGACTTCGAGGGCTGGACAGAGCTGCTTTTCGCCGGCTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: AVWHSFDFEGWTELLFAGSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...GCCGGCGAAAAGCAGCTCTGTCCAGCCCTCGAAGTCGAAAGAATGCCACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CACTCCCCTTCTGTAGCTGGAGTACTTTGTCCCTCAGGGACTCATCCAACTGGTTGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: HSPSVAGVLCPSGTHPTGCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...ACCAGTTGGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ATCCAACTGGTCAAGGTAAGGGGTGATATCAACTGGCTCCTCCACAACTGTCTCGGGTGCTCCTTGTATTaGAGGTGCTGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: IQLVKVRGDINWLLHNCLGCSLY*RCCRMG
Trigger: CCCCATCCTGCAGCACCTCAAATACAAGGAGCACCC...GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCTTACCTTGACCAGTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ATCCAACTGGTCAAGGTAAGGGGTGATATCAACTGGCTCCTCCACAACTGTCTCGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IQLVKVRGDINWLLHNCLASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...GAGACAGTTGTGGAGGAGCCAGTTGATATCACCCCTTACCTTGACCAGTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLLMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp CAGCACCATCTTCACCATCTCCTCGCTGGGCTTTTCTCTTCGGAGTTGAAGCAGAAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: QHHLHHLLAGLFSSELKQKFCLV*VRLSRR
Trigger: TCTGCGGCTCAACCTGACCAACACCAAGCAGAACTT...CTGCTTCAACTCCGAAGAGAAAAGCCCAGCGAGGAGATGGTGAAGATGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: SIAKELSSAGSHGPASGHSLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...GTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCCGGCTCTTGGGTGGCTaGGTGGAAGAGTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: QIKTKLYMHGANASRHSSRLLGG*VEESSY
Trigger: ATATGAGGACTCTTCCACCAAGCCACCCAAGAGCCG...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CAAGGAACTCTCCTCTGCTGGTTCACATGGCCCAGCAAGTGGCCACACTTTGAACCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: QGTLLCWFTWPSKWPHFEPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...TTCAAAGTGTGGCCACTTGCTGGGCCATGTGAACCAGCAGAGGAGAGTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATTCCACCGGGGGAGCTaGGGGATGCAGCAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTAFHRGS*GMQQGC
Trigger: ACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCTGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp AAAGTGGGGGCAGAACAGGAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGTGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: KVGAEQEGKGGCSAVTSRWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...CCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTCCTGTTCTGCCCCCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TGGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACAGCAAGTGGCCACACTTaGAATCACCAAGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: WTAGEQQHSQGTLLCWFTASGHT*NHQEGE
Trigger: CTCTCCTTCTTGGTGATTCAAAGTGTGGCCACTTGC...TGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
CDS TCA 90 bp GCTGCAGAGAGAACTGGACTTCCTGACCACTCCAGGCCACTCAAATaGGAAATTCTTACTGGACCTGGCTGCTCCCCAAGGAAACCAGAT +
Preference number: 5 (lower is better)
Translates to: AAERTGLPDHSRPLK*EILTGPGCSPRKPD
Trigger: ATCTGGTTTCCTTGGGGAGCAGCCAGGTCCAGTAAGAATTTCTCATTTGAGTGGCCTGGAGTGGTCAGGAAGTCCAGTTCTCTCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS CCA 90 bp ATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTAAAAACTAGAGGAAGAAAAGGGAGA +
Preference number: 5 (lower is better)
Translates to: ILWASSQLAWTCCSA*RIGVWLKTRGRKGR
Trigger: TCTCCCTTTTCTTCCTCTAGTTTTTAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS-3UTR CAA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGTGGCATCCAAACTGGTaGAAAGTAGCAGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKWHPNW*KVAASP
Trigger: GGGGGAGGCTGCTACTTTCAACCAGTTTGGATGCCA...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTGCTGGGGGAGGCCTTaGCACACATACGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: FTEPLASVRSQISLGTAVCWGRP*HTYALR
Trigger: CCTCAATGCGTATGTGTGCAAAGGCCTCCCCCAGCA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGAATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATACTGACTATCTGGAGTaGACAGGTACTGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHTDYLE*TGTGAG
Trigger: TCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGT...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTGGAGGCAGCGACATTaGACGTGCACGTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLWRQRH*TCTLSG
Trigger: TCCTGACAACGTGCACGTCAAATGTCGCTGCCTCCA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: EEKAPPSTGGAWGCSKGVFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...AACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCTTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: EKAPPSTGGAWGCSKGVSFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...GGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GTCCACAATTTCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: VHNFLHDLTLGLRITPLLLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...CAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CCGGCCATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: PAILGRHTDFNWRMTDLLTGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...CAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAATGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCCTGCATGACCTCACACTGGGCCTCCGTATCACTCCCCTTCTGTAGCTGGAGTTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SCMTSHWASVSLPFCSWSSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...ACTCCAGCTACAGAAGGGGAGTGATACGGAGGCCCAGTGTGAGGTCATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGCCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: FTEPLASVRSQISLGTAVPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FTEPLASVRSQISLGTAVASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTTTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFLMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GAAGGCTGCCTCTGCATTGTCATAGCAACTCTCATCCTTATCCGACATATGGTTGCTTTTCGCCGGCTCTaGGGTGGCTTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: EGCLCIVIATLILIRHMVAFRRL*GGLVEE
Trigger: CTCTTCCACCAAGCCACCCAAGAGCCGGCGAAAAGC...AACCATATGTCGGATAAGGATGAGAGTTGCTATGACAATGCAGAGGCAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTGGAGCATTTCCCTTCTCTGTaGAAATGGCTCTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: FHLVGFVTARLDMLQRLEHFPSL*KWLFGR
Trigger: TCTCCCAAAGAGCCATTTCAACAGAGAAGGGAAATG...CTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAATGCTAGTATCTATCTaGGACTATCAACTGGCTAAG +
Preference number: 5 (lower is better)
Translates to: SARGESSSFHRGSLGMQQMLVSI*DYQLAK
Trigger: CTTAGCCAGTTGATAGTCCAAGATAGATACTAGCAT...TTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CAA 90 bp AGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCATGCTAGTATCTATCTaGGACTATCAACTGGCTAAG +
Preference number: 5 (lower is better)
Translates to: RKLLLPPGELGDAARVFPMLVSI*DYQLAK
Trigger: CTTAGCCAGTTGATAGTCCAAGATAGATACTAGCAT...GGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTCACGCTTCTTGGGCTaGGCTACAGTGCCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSRFLG*ATVPQK
Trigger: TTTCTGAGGCACTGTAGCCAAGCCCAAGAAGCGTGA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512605.4
ENST00000576422.4
CDS TCA 90 bp CGTTGTCAGGAGCCAACCAATGATGGCCCACCGGGGCAAGATATCTaGACTCAGTACTTCATTAGAAGGGTGGACTACCCCACAGATGTA +
Preference number: 5 (lower is better)
Translates to: RCQEPTNDGPPGQDI*TQYFIRRVDYPTDV
Trigger: TACATCTGTGGGGTAGTCCACCCTTCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000503133.5
ENST00000512605.4
ENST00000571768.5
ENST00000575708.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS GCA 90 bp CTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGCGTCTGGCTAAAAACTAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: LNFILWASSQLAWTC*SAWRIGVWLKTRGR
Trigger: TCTTCCTCTAGTTTTTAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS GCA 90 bp TCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATaGTGCAGCGCCTGGAGAATTGGCGTCTGGCTAAAAACTAGAGGA +
Preference number: 5 (lower is better)
Translates to: SLNFILWASSQLAWT*CSAWRIGVWLKTRG
Trigger: TCCTCTAGTTTTTAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS-3UTR CAA 90 bp GGACAGCGGGGGAACAACAGCATAGCCAAGGAACTCTCCTCTGCTGGTTCACATGCCAACCAGATATTTTaGGCTGTAACATCTCCACCT +
Preference number: 5 (lower is better)
Translates to: GQRGNNSIAKELSSAGSHANQIF*AVTSPP
Trigger: AGGTGGAGATGTTACAGCCAAAAATATCTGGTTGGC...ATGTGAACCAGCAGAGGAGAGTTCCTTGGCTATGCTGTTGTTCCCCCGCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTGGTATCGCTTTTGTaGACCAAATCGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHLVSLL*TKSHPG
Trigger: TCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TGTGGCATCTGCCCCATGATTAGGAATGGACACCCTGACCACGTCATAGATGCCATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: CGICPMIRNGHPDHVIDAILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...GGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGAAAGCCAGCTTGGCATaGGAGGCAGCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLKASLA*EAATFD
Trigger: GTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTT...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCATTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: KLSQRRKLLLPPGELGDAFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...TGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: SQTQPEEKAPPSTGGAWGFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...TCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GTCTTCCTCCAGGACCTGGTCCACAATTTCCTGCATGACCTCACACTGGGCCTCTTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 5 (lower is better)
Translates to: VFLQDLVHNFLHDLTLGLFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...GAGGCCCAGTGTGAGGTCATGCAGGAAATTGTGGACCAGGTCCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACCTCGAAAGTGGGCCTaGAAGAGCTCCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTAPRKWA*KSSCRQ
Trigger: CTGCCTACAGGAGCTCTTCAAGGCCCACTTTCGAGG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGCCTCTGGGTGCTCCTaGTATTTGAGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTAASGCS*YLRCCR
Trigger: CCTGCAGCACCTCAAATACAAGGAGCACCCAGAGGC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATTGATGAGCAGGGACTaGATGTGCTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTALMSRD*MCSASS
Trigger: GCTGCTGGCCGAGCACATCAAGTCCCTGCTCATCAA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGTAGAGCAGGTGGTAGCCAATCTTGGGCTGCTTCTGATATAGCTCGGAGAGAAGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: SRAGGSQSWAASDIARREGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...TTCTCTCCGAGCTATATCAGAAGCAGCCCAAGATTGGCTACCACCTGCTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: FTEPLASVRSQISLGTAVLRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATTTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GGRVLIFLRQGEEITEFHLRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...ATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGTCAGCTGGGCCAGCTaGCTGCTAGAGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: REEGKRSLQWFRLSKEATVSWAS*LLELLR
Trigger: CCTGAGGAGCTCTAGCAGCAAGCTGGCCCAGCTGAC...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTTGGTGGAAGAGTCCTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LGGRVLIFLRQGEEITEFRLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...AAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLLVLVR*SRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CACTCCCCTTCTGTAGCTGGAGTACTTTGTCCCTCAGGGACTCATCCAACTGGTTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: HSPSVAGVLCPSGTHPTGSLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...ACCAGTTGGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACAGAAGGGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCACCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGGTGTAGATTGAGGTGCCAACCTCAGACCAACCTAAGCCTCCAGGGCACACATTTCCCTTCTCTGTaGAAATGGCTCTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LWCRLRCQPQTNLSLQGTHFPSL*KWLFGR
Trigger: TCTCCCAAAGAGCCATTTCAACAGAGAAGGGAAATG...TGTGCCCTGGAGGCTTAGGTTGGTCTGAGGTTGGCACCTCAATCTACACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTCTCCTTTCTGAATGCTaGTGGCATCTGCCCCATGAT +
Preference number: 5 (lower is better)
Translates to: SSWSCAESITATIMFSSSLLSEC*WHLPHD
Trigger: ATCATGGGGCAGATGCCACAAGCATTCAGAAAGGAG...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS TCA 90 bp GATGTAGCGAATGAGGTCACAGCGCAGAGACTGACTATCTGGAGTTaGCAGGTACTGGCGCTGGAACCAATCTTGGTATCGCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: DVANEVTAQRLTIWS*QVLALEPILVSLLL
Trigger: CAACAAAAGCGATACCAAGATTGGTTCCAGCGCCAGTACCTGTCAACTCCAGATAGTCAGTCTCTGCGCTGTGACCTCATTCGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS TCA 90 bp TGGTCCACCCTGACTGCCATCCCATTACTGCCATCCCTTCACTGCTaGGATAAACTGCCTTCTGTTCTGTCAGGCTTTAAAGTTTCACCC +
Preference number: 5 (lower is better)
Translates to: WSTLTAIPLLPSLHC*DKLPSVLSGFKVSP
Trigger: GGGTGAAACTTTAAAGCCTGACAGAACAGAAGGCAGTTTATCTCAGCAGTGAAGGGATGGCAGTAATGGGATGGCAGTCAGGGTGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 90 bp CCCTTCTTGTTCCCAGCATTCAGCTTTGAGAAGGGAAGTAATAGGTaGGGAGAAGCAGGACATGGTACAGCCTTTTCCTTTGCCCATGCC +
Preference number: 5 (lower is better)
Translates to: PFLFPAFSFEKGSNR*GEAGHGTAFSFAHA
Trigger: GGCATGGGCAAAGGAAAAGGCTGTACCATGTCCTGCTTCTCCTCACCTATTACTTCCCTTCTCAAAGCTGAATGCTGGGAACAAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS-3UTR CAA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCTGAGGGAAAGGCGTaGGCTCCGAAGTACAGTGGG +
Preference number: 5 (lower is better)
Translates to: REEGKRSLQWFRLSKEATAEGKA*APKYSG
Trigger: CCCACTGTACTTCGGAGCCAACGCCTTTCCCTCAGC...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATGGCATCCAAACTGGTaGAAAGTAGCAGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTAWHPNW*KVAASP
Trigger: GGGGGAGGCTGCTACTTTCAACCAGTTTGGATGCCA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCACAGGACCCACTCCCTTaGCTCTGTCAGGATATCCAG +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTAQDPLP*LCQDIQ
Trigger: CTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCTG...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTAAAGCCAGCTTGGCATaGGAGGCAGCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACKASLA*EAATFD
Trigger: GTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTT...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp TGGGGATTATGGTCTCCAGGGGAATATTGTGGGCCAGAAAGAGCTGCCAGGCACTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: WGLWSPGEYCGPERAARHLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...GTGCCTGGCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGACCATAATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCATATTCCTCCGCCAGGGAGAAGAGATCACTGAATTTCATCTTGTGGGCTTCTGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: LIFLRQGEEITEFHLVGFCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...GAAGCCCACAAGATGAAATTCAGTGATCTCTTCTCCCTGGCGGAGGAATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTCTCCAGGGGAATATaGTGGGCCAGAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTAVSRGI*WARKSC
Trigger: GCAGCTCTTTCTGGCCCACAATATTCCCCTGGAGAC...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCATTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEALRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATTGCGAGGCAGGCTGTaGTTCTTGATGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTALRGRL*FLMSRD
Trigger: GTCCCTGCTCATCAAGAACAACAGCCTGCCTCGCAA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGCTCAGGCTCTGTCTCTaGCGAGGCAGGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SLSDIWLSISMETGSSILLRLCL*RGRLLF
Trigger: GAACAACAGCCTGCCTCGCAAGAGACAGAGCCTGAG...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp ATTCTTGGTAGGCACACAGACTTCAACTGGAGGATGACAGACCTTTTGGAAGCAAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: ILGRHTDFNWRMTDLLEARLSRR*SKCSRI
Trigger: GATCCTGGAGCACTTGGACAATCTGCGGCTCAACCT...TGCTTCCAAAAGGTCTGTCATCCTCCAGTTGAAGTCTGTGTGCCTACCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTCCTTTTCGTTTCCGCTaGGTAGGCTTCGGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNIPFRFR*VGFGFV
Trigger: CACGAAACCGAAGCCTACCAAGCGGAAACGAAAAGG...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTGGCCAGCTGCCCCTTaGTCATTTCCCTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: FTEPLASVRSQISLGTAVWPAAP*SFPFSV
Trigger: AACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGCTCCTTTCTGAATGCTaGTGGCATCTGCCCCATGAT +
Preference number: 5 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKLLSEC*WHLPHD
Trigger: ATCATGGGGCAGATGCCACAAGCATTCAGAAAGGAG...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS TCA 90 bp CACAATGATAGGGGTGTGTTAGCCCTGATTCCTCTTTCCCGTTCCTaGCAGAGAGAAGATCCATCCTCTCTCTTTGAGCTGGATCTTGTC +
Preference number: 5 (lower is better)
Translates to: HNDRGVLALIPLSRS*QREDPSSLFELDLV
Trigger: GACAAGATCCAGCTCAAAGAGAGAGGATGGATCTTCTCTCTGTCAGGAACGGGAAAGAGGAATCAGGGCTAACACACCCCTATCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS GCA 90 bp GGGCTCTCCTCCTTTCTTCTTTATGCTCCTGCCATCAAACTCACCTaGAATCTGCTTCATAAACGTCATACAAACACCATCGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GLSSFLLYAPAIKLT*NLLHKRHTNTIGSQ
Trigger: CTGGGAGCCGATGGTGTTTGTATGACGTTTATGAAGCAGATTGCAGGTGAGTTTGATGGCAGGAGCATAAAGAAGAAAGGAGGAGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS GCA 90 bp AGTGCTTGCTATGAAACTCTGTGGGGCAGAATTAACACACAGCAATaGCATACCAGTCTTGGGATAAGAAGCAGGGGCTGGAAGTGCCAA +
Preference number: 5 (lower is better)
Translates to: SACYETLWGRINTQQ*HTSLGIRSRGWKCQ
Trigger: TTGGCACTTCCAGCCCCTGCTTCTTATCCCAAGACTGGTATGGCATTGCTGTGTGTTAATTCTGCCCCACAGAGTTTCATAGCAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS-3UTR CAA 90 bp TCTGGGTGCTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: SGCSLYLRCCRMGIMVSRIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...CCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAGCACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTTTGGTATCGCTTTTGTaGACCAAATCGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNILVSLL*TKSHPG
Trigger: TCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAA...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAACTTCTCTCTCAGCATaGCCCGCAGCTCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTATSLSA*PAAPYP
Trigger: TGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGT...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAACTGGCTCCTCAATTTaGACTTCCACAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTATGSSI*TSTGGE
Trigger: CTCCCCACCTGTGGAAGTCAAAATTGAGGAGCCAGT...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SSWSCAESITATIMFSSSSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QIKTKLYMHGANASRHSSSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACGATCATGTTCAGCAGCTCTCCGCTCCTCAAGGTTTCATCTGGAAACTCTGTGTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: TIMFSSSPLLKVSSGNSVSLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...CACAGAGTTTCCAGATGAAACCTTGAGGAGCGGAGAGCTGCTGAACATGATCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCATTTCCCTTCTCTGTaGAAATGGCTCTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSHFPSL*KWLFGR
Trigger: TCTCCCAAAGAGCCATTTCAACAGAGAAGGGAAATG...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATCATTTCCCTTCTCTGTaGAAATGGCTCTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHHFPSL*KWLFGR
Trigger: TCTCCCAAAGAGCCATTTCAACAGAGAAGGGAAATG...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS TCA 90 bp CCTCTCTCTTTGAGCTGGATCTTGTCTTTTCTTTCTGGCCTTACCTaGGTACGGCAGGTATCCTGCAGCTTCAGGTACTTCTCCATAAGT +
Preference number: 5 (lower is better)
Translates to: PLSLSWILSFLSGLT*VRQVSCSFRYFSIS
Trigger: ACTTATGGAGAAGTACCTGAAGCTGCAGGATACCTGCCGTACTCAGGTAAGGCCAGAAAGAAAAGACAAGATCCAGCTCAAAGAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS GCA 90 bp CATTGGCTTCTCTCTCCGAGACACCAGCAGTCATCGATGTCACAATaGTCATACACCTTTCCAATCTCTCCTCTAACTCATCCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: HWLLSPRHQQSSMSQ*SYTFPISPLTHPWH
Trigger: ATGCCAAGGATGAGTTAGAGGAGAGATTGGAAAGGTGTATGAGCATTGTGACATCGATGACTGCTGGTGTCTCGGAGAGAGAAGCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
CDS GCA 90 bp CAGGACCCACTCCCTTTGCTCTGTCAGGATATCCAGAACACTTTCTaGCAACCAGATATTTTTGGCTGTAACATCTCCACCTGCAATCTG +
Preference number: 5 (lower is better)
Translates to: QDPLPLLCQDIQNTF*QPDIFGCNISTCNL
Trigger: CAGATTGCAGGTGGAGATGTTACAGCCAAAAATATCTGGTTGGCAGAAAGTGTTCTGGATATCCTGACAGAGCAAAGGGAGTGGGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000571768.5
ENST00000576030.5
CDS-3UTR CAA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTTTGCACACATACGCATaGAGGGCATCATTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACLHTYA*RASLAS
Trigger: AGAAGCCAATGATGCCCTCAATGCGTATGTGTGCAA...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGGTAACACTTCTGGGCTaGGGCAGGTTCAGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQVTLLG*GRFSED
Trigger: ATCCTCACTGAACCTGCCCAAGCCCAGAAGTGTTAC...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp CTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: LCSHPSLSGQLPLCHFPSIFGMF*TEEAVG
Trigger: TCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAAT...AGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp ATTAGGAATGGACACCCTGACCACGTCATAGATGCCCATTTCACACTGGCATGTATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: IRNGHPDHVIDAHFTLACILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...ACATGCCAGTGTGAAATGGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000575774.5
ENST00000576030.5
CDS-3UTR CAA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGAAAGCCAGCTTGGCATaGGAGGCAGCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQKASLA*EAATFD
Trigger: GTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTT...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: FTEPLASVRSQISLGTAVLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp CAAATCAAGACCAAGCTATACATGCACGGGGCAAATGCCAGCAGACACTCCAGCTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: QIKTKLYMHGANASRHSSLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...GCTGGAGTGTCTGCTGGCATTTGCCCCGTGCATGTATAGCTTGGTCTTGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp ACACTGAGTCTCTGCTCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: TLSLCSHPSLSGQLPLCHLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...ATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGAGCAGAGACTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TTGAGAACTGAGTCTTTTCGAAACATAACCAGGTTACCCATCATCACGTGGCAGTGTAGCTGGAGTACTTaGTCCCTCAGGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: LRTESFRNITRLPIITWQCSWST*SLRDSS
Trigger: GGATGAGTCCCTGAGGGACAAAGTACTCCAGCTACA...CTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGACTCAGTTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: FTEPLASVRSQISLGTAVSLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...CACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TCCACAACTGTCTCCTTGATAGGGTGGAAGCGAAACTCCCTCTTCTTTCCTTTGTCACTGAATTTCATCTaGTGGGCTTCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: STTVSLIGWKRNSLFFPLSLNFI*WASSQL
Trigger: GAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGA...CAAAGGAAAGAAGAGGGAGTTTCGCTTCCACCCTATCAAGGAGACAGTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GAAGGGAAAGGGGGATGTTCTGCGGTTACAAGTAGGGGTGCCAATCAAATCAAGCATTTCCCTTCTCTGTaGAAATGGCTCTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: EGKGGCSAVTSRGANQIKHFPSL*KWLFGR
Trigger: TCTCCCAAAGAGCCATTTCAACAGAGAAGGGAAATG...CTTGATTTGATTGGCACCCCTACTTGTAACCGCAGAACATCCCCCTTTCCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS TCA 90 bp GAGAGAAATTCCTCTAAGAGCCAAGAAGACATATGCCCAGCAGTCTaGGGTAGAGCCAATACTTTTTACACGCCAAGACCCGTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: ERNSSKSQEDICPAV*GRANTFYTPRPVSP
Trigger: TGGAGAAACGGGTCTTGGCGTGTAAAAAGTATTGGCTCTACCTCAGACTGCTGGGCATATGTCTTCTTGGCTCTTAGAGGAATTTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCATTGAGGGCATCATaGGCTTCTCTCTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: REEGKRSLQWFRLSKEATALRAS*ASLSET
Trigger: TGTCTCGGAGAGAGAAGCCAATGATGCCCTCAATGC...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCG +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTAILVSL*LTKSHP
Trigger: CGGGTGCGATTTGGTCAACAAAAGCGATACCAAGAT...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AGCTCCTGGAGCTGTGCAGAGTCAATAACAGCCACGATCATGTTCAGCAGCTCTTTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: SSWSCAESITATIMFSSSFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...AGAGCTGCTGAACATGATCGTGGCTGTTATTGACTCTGCACAGCTCCAGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS-3UTR CAA 90 bp GATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCATTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: DFTEPLASVRSQISLGTALSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...TGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp GCTGTTGAGATCCTCTTCATCGTCACTGAAGGCTGCCTCTGCATTGTCATAGCATTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 5 (lower is better)
Translates to: AVEILFIVTEGCLCIVIAFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...TGCTATGACAATGCAGAGGCAGCCTTCAGTGACGATGAAGAGGATCTCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp AAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTCCCTCTTCTTTCCTTaGCTGTTGAGATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KRSLNFILWASSQLAWTCSLFFP*LLRSSS
Trigger: TGAAGAGGATCTCAACAGCAAAGGAAAGAAGAGGGA...GCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS-3UTR CAA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGGCAGGCTGTTGTTCTaGATGAGCAGGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: REEGKRSLQWFRLSKEATGRLLF*MSRDLM
Trigger: CATCAAGTCCCTGCTCATCAAGAACAACAGCCTGCC...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp GGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGCAGTGATGGCAAGTGGCCACACTTaGAATCACCAAGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GKRSLQWFRLSKEATAVMASGHT*NHQEGE
Trigger: CTCTCCTTCTTGGTGATTCAAAGTGTGGCCACTTGC...CATCACTGCTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623139.1
ENST00000624515.1
CDS TCA 90 bp CAGGTCACTTTTAAACAAACACATGCAATCTTGGGAGTAGCCGCTTaGATATGCGATAGCTCAGACAGATGTCACCGATGCCAAGATGAG +
Preference number: 5 (lower is better)
Translates to: QVTFKQTHAILGVAA*ICDSSDRCHRCQDE
Trigger: CTCATCTTGGCATCGGTGACATCTGTCTGAGCTATCGCATATTCAAGCGGCTACTCCCAAGATTGCATGTGTTTGTTTAAAAGTGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 90 bp GAGAGAAATTCCTCTAAGAGCCAAGAAGACATATGCCCAGCAGTCTaGGGTAGAGCCAATACTTTTTACACCTGTCAGAGAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ERNSSKSQEDICPAV*GRANTFYTCQRKGP
Trigger: TGGCCCTTTTCTCTGACAGGTGTAAAAAGTATTGGCTCTACCTCAGACTGCTGGGCATATGTCTTCTTGGCTCTTAGAGGAATTTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS TCA 90 bp ATAGGTCTAAGCACAATCAGTCTAACTGGACCATACTCAGATCCCTaGAGGGGGTCAACAGGGAACATGAAGGCATTTGAAGACCTTTGT +
Preference number: 5 (lower is better)
Translates to: IGLSTISLTGPYSDP*RGSTGNMKAFEDLC
Trigger: ACAAAGGTCTTCAAATGCCTTCATGTTCCCTGTTGACCCCCTTCAGGGATCTGAGTATGGTCCAGTTAGACTGATTGTGCTTAGACCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS-3UTR CAA 90 bp AGAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACATTGGTATCGCTTTTGTaGACCAAATCGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: REEGKRSLQWFRLSKEATLVSLL*TKSHPG
Trigger: TCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAA...TGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TCTCATCCTAGCTTATCTGGCCAGCTGCCCCTTTGTCATTTCCCTTCTCTGTTGTTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: SHPSLSGQLPLCHFPSLLFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...CAACAGAGAAGGGAAATGACAAAGGGGCAGCTGGCCAGATAAGCTAGGATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000476843.5
ENST00000512605.4
ENST00000575774.5
ENST00000576030.5
ENST00000576422.4
CDS-3UTR CAA 90 bp TTGAGAACTGAGTCTTTTCGAAACATAACCAGGTTACCCATCATCACGTGGCAGTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: LRTESFRNITRLPIITWQLSNLG*SNRGAR
Trigger: CCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAA...CTGCCACGTGATGATGGGTAACCTGGTTATGTTTCGAAAAGACTCAGTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS TCA 90 bp CACTGTGTCTGGCCAGAGCTTCTCATTTCTAACTCAACATGGAGTTaGGATAGGTCTAAGCACAATCAGTCTAACTGGACCATACTCAGA +
Preference number: 5 (lower is better)
Translates to: HCVWPELLISNSTWS*DRSKHNQSNWTILR
Trigger: TCTGAGTATGGTCCAGTTAGACTGATTGTGCTTAGACCTATCTCAACTCCATGTTGAGTTAGAAATGAGAAGCTCTGGCCAGACACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS CCA 90 bp ATCCCTTTGGCACTTAATCATTCTCCATTGTCTCTATGTAGTCTCTaGGCTCTCCTCCTTTCTTCTTTATGCTCCTGCCATCAAACTCAC +
Preference number: 5 (lower is better)
Translates to: IPLALNHSPLSLCSL*ALLLSSLCSCHQTH
Trigger: GTGAGTTTGATGGCAGGAGCATAAAGAAGAAAGGAGGAGAGCCCAGAGACTACATAGAGACAATGGAGAATGATTAAGTGCCAAAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS-3UTR CAA 90 bp CTCCTTGTATTTGAGGTGCTGCAGGATGGGGATTATGGTCTCCAGGGGAATATTTTCATAATGCTATCCTaGTCTGGACTAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: LLVFEVLQDGDYGLQGNIFIMLS*SGLKNS
Trigger: GCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAA...AATATTCCCCTGGAGACCATAATCCCCATCCTGCAGCACCTCAAATACAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS CCA 90 bp CATGACCAGGATGGCTGGTTCTATGTTCATAATGCTATCCTTGTCTaGACTAAAGAACAGCCAGTCATAAAACAAAGCCAGCTTGGCATT +
Preference number: 5 (lower is better)
Translates to: HDQDGWFYVHNAILV*TKEQPVIKQSQLGI
Trigger: AATGCCAAGCTGGCTTTGTTTTATGACTGGCTGTTCTTTAGTCCAGACAAGGATAGCATTATGAACATAGAACCAGCCATCCTGGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS-3UTR CAA 90 bp GAGAGGAAGGAAAAAGAAGCCTCCAGTGGTTTAGACTTTCAAAGGAAGCAACAGTTATCCGACATATGGTaGTCCATCTCCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: ERKEKEASSGLDFQRKQQLSDIW*SISMET
Trigger: AGTTTCCATGGAGATGGACAACCATATGTCGGATAA...CTGTTGCTTCCTTTGAAAGTCTAAACCACTGGAGGCTTCTTTTTCCTTCCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS-3UTR CAA 90 bp TCCTTATCCGACATATGGTTGTCCATCTCCATGGAAACTGGCTCCTCAATTTTGTTCTTTCCTTTGCTGTaGAGATCCTCTTCATCGTCA +
Preference number: 5 (lower is better)
Translates to: SLSDIWLSISMETGSSILFFPLL*RSSSSS
Trigger: TGACGATGAAGAGGATCTCAACAGCAAAGGAAAGAA...CAAAATTGAGGAGCCAGTTTCCATGGAGATGGACAACCATATGTCGGATAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476843.5
ENST00000503133.5
ENST00000575708.5
ENST00000575774.5
CDS CCA 90 bp TCTTATTTCCAGGTAACAGTCTTTAGTGCTTGCTATGAAACTCTGTaGGGCAGAATTAACACACAGCAATGCCATACCAGTCTTGGGATA +
Preference number: 5 (lower is better)
Translates to: SYFQVTVFSACYETL*GRINTQQCHTSLGI
Trigger: TATCCCAAGACTGGTATGGCATTGCTGTGTGTTAATTCTGCCCCACAGAGTTTCATAGCAAGCACTAAAGACTGTTACCTGGAAATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 90 bp ATATCTTTCCAAAGCAGTTCAAATTCTGGTATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCCCGACCAATCATCAGACATTCCATG +
Preference number: 5 (lower is better)
Translates to: ISFQSSSNSGILATF*SSLTRSRPIIRHSM
Trigger: CATGGAATGTCTGATGATTGGTCGGGATCTCGTAAGACTACTTCAGAATGTTGCTAGGATACCAGAATTTGAACTGCTTTGGAAAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS CCA 90 bp ATGAGGGCAGTGACACCTCACAGCATATACAAACTTAGCTCAAAATaGCTTGTAGGCCTAAATGTAAGAATTAAAGCCACACAACTTGTA +
Preference number: 5 (lower is better)
Translates to: MRAVTPHSIYKLSSK*LVGLNVRIKATQLV
Trigger: TACAAGTTGTGTGGCTTTAATTCTTACATTTAGGCCTACAAGCCATTTTGAGCTAAGTTTGTATATGCTGTGAGGTGTCACTGCCCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS CCA 72 bp CACTCCTCCCTCCTCTCCAAAAGGCCGCGCCTGCGTTaGGGGCGAAGGCACAGTCCTCTGGGTCCTGACTCT +
Preference number: 6 (lower is better)
Translates to: HSSLLSKRPRLR*GRRHSPLGPDS
Trigger: AGAGTCAGGACCCAGAGGACTGTGCCTTCGCCCCCAACGCAGGCGCGGCCTTTTGGAGAGGAGGGAGGAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318967.7
ENST00000576030.5
CDS CCA 72 bp CAGAAGTCTACTTCCTTCTGTCGCAGGGCCTGGAGCTaGGCAGTCCCATGGTGGTCCACGATGAGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: QKSTSFCRRAWS*AVPWWSTMRRR
Trigger: CCTCCGCCTCATCGTGGACCACCATGGGACTGCCCAGCTCCAGGCCCTGCGACAGAAGGAAGTAGACTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
CDS TCA 72 bp GGAGAATTGCTGGAACCTAGCATGCGGAGGTTGCAGTaGGTGGAGCTCGCGCCACTGCACTCCAGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: GELLEPSMRRLQ*VELAPLHSSLG
Trigger: GCCCAGACTGGAGTGCAGTGGCGCGAGCTCCACTCACTGCAACCTCCGCATGCTAGGTTCCAGCAATTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368670.5
ENST00000573844.5
CDS CCA 72 bp GGCCAGGGCAGCACCGTCTACACTGGACGCCGAGGGTaGAAGGCATACAGTTCTGCTTGGTGTTGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: GQGSTVYTGRRG*KAYSSAWCWSG
Trigger: ACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGTGTAGACGGTGCTGCCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CAA 90 bp CACCGTCTACACTGGACGCCGAGGGTGGAAGGCATACAGTTCTGCTaGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: HRLHWTPRVEGIQFC*VLVRLSRRLSKCSR
Trigger: CCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGTGTAGACGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS TCA 72 bp CTAGGTGTGCCAAGACCCGTTTCTCCACAATGTGGTTaGGGGAGGAAAAGACACCCTGCCGCACGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: LGVPRPVSPQCG*GRKRHPAARGP
Trigger: AGGGCCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACGGGTCTTGGCACACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
CDS GCA 72 bp GTGGCAGTGATGGCTGGGTGGGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGTTCTGGAGGATGTGAA +
Preference number: 6 (lower is better)
Translates to: VAVMAGWGFMEW*MTRMAGSGGCE
Trigger: TTCACATCCTCCAGAACCAGCCATCCTGGTCATGCACCACTCCATGAAGCCCCACCCAGCCATCACTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS CCA 72 bp GGAGCTAGGTGTGCCAAGACCCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACACCCTGCCGCACGTGG +
Preference number: 6 (lower is better)
Translates to: GARCAKTRFSTM*LREEKTPCRTW
Trigger: CCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACGGGTCTTGGCACACCTAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
CDS CAA 90 bp GAAGGCATACAGTTCTGCTTGGTGTTGGTCAGGTTGAGCCGCAGATaGTCCAAGTGCTCCAGGATCTGCTCCAGAGTCAGCTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: EGIQFCLVLVRLSRR*SKCSRICSRVSWAS
Trigger: GCTGGCCCAGCTGACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CAA 90 bp ACGCCGAGGGTGGAAGGCATACAGTTCTGCTTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCTCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: TPRVEGIQFCLVLVR*SRRLSKCSRICSRV
Trigger: GACTCTGGAGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CAA 90 bp CTACACTGGACGCCGAGGGTGGAAGGCATACAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGC +
Preference number: 6 (lower is better)
Translates to: LHWTPRVEGIQFCLV*VRLSRRLSKCSRIC
Trigger: GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS TCA 72 bp TTCCTTACGCCAAGACCCGTTTCTCCACAATGTGGTTaGGGGAGGAAAAGACACCCTGCCGCACGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: FLTPRPVSPQCG*GRKRHPAARGP
Trigger: AGGGCCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACGGGTCTTGGCGTAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS GCA 72 bp CTACACTGGACGCCGAGGGTGGAAGGCATACAGTTCTaGTTGGTGTTGGTCAGGTTGAGCCGCAGATTGTCC +
Preference number: 6 (lower is better)
Translates to: LHWTPRVEGIQF*LVLVRLSRRLS
Trigger: GGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CCA 72 bp TCCCCGAAGCAGGCTCCCGCTCTAAAACTGCTTTGCTaGCTCCAGATGCCCTGTGCTAATCTGCCTCATGTC +
Preference number: 6 (lower is better)
Translates to: SPKQAPALKLLC*LQMPCANLPHV
Trigger: GACATGAGGCAGATTAGCACAGGGCATCTGGAGCCAGCAAAGCAGTTTTAGAGCGGGAGCCTGCTTCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS CAA 72 bp ACGCCGAGGGTGGAAGGCATACAGTTCTGCTTGGTGTaGGTCAGGTTGAGCCGCAGATTGTCCAAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: TPRVEGIQFCLV*VRLSRRLSKCS
Trigger: GGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CAA 72 bp CACTGGACGCCGAGGGTGGAAGGCATACAGTTCTGCTaGGTGTTGGTCAGGTTGAGCCGCAGATTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: HWTPRVEGIQFC*VLVRLSRRLSK
Trigger: CTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGGCGTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS TCA 72 bp CTCCAACCACGATCAGTGAGTGAAGCTACTGCCGGATaGGAGTCAGGAACAGAAGAGGGAGGGCTCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LQPRSVSEATAG*ESGTEEGGLRS
Trigger: TGACCTGAGCCCTCCCTCTTCTGTTCCTGACTCTCATCCGGCAGTAGCTTCACTCACTGATCGTGGTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS CCA 72 bp AGCCAGGAGCCGGGAAAAGGTCAGGGAGTGGATGGATaGACAGTCCTAGATATCGGGATCTCTGGATTGCCA +
Preference number: 6 (lower is better)
Translates to: SQEPGKGQGVDG*TVLDIGISGLP
Trigger: TGGCAATCCAGAGATCCCGATATCTAGGACTGTCCATCCATCCACTCCCTGACCTTTTCCCGGCTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
CDS CCA 72 bp GGAAAAGACACCCTGCCGCACGTGGCCCTCCAATGGTaGATAGAAGTTGGGAATGATGCGGCACATGAAGTC +
Preference number: 6 (lower is better)
Translates to: GKDTLPHVALQW*IEVGNDAAHEV
Trigger: GACTTCATGTGCCGCATCATTCCCAACTTCTATCCACCATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS CCA 72 bp GGAGGAAAAGACACCCTGCCGCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAATGATGCGGCACATGAA +
Preference number: 6 (lower is better)
Translates to: GGKDTLPHVALQ*WIEVGNDAAHE
Trigger: TTCATGTGCCGCATCATTCCCAACTTCTATCCACCATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS CCA 72 bp AGTGGATGGATGGACAGTCCTAGATATCGGGATCTCTaGATTGCCAGGGACTTCCTGGCTGATGCCCCAAGG +
Preference number: 6 (lower is better)
Translates to: SGWMDSPRYRDL*IARDFLADAPR
Trigger: CCTTGGGGCATCAGCCAGGAAGTCCCTGGCAATCCAGAGATCCCGATATCTAGGACTGTCCATCCATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435409.6
ENST00000571768.5
CDS CCA 72 bp GGAGGAAAAGACACCCTGCCGCACGTGGCCCTCCAATaGTGGATAGAAGTTGGGAATGATCTGGAAGCGAAG +
Preference number: 6 (lower is better)
Translates to: GGKDTLPHVALQ*WIEVGNDLEAK
Trigger: CTTCGCTTCCAGATCATTCCCAACTTCTATCCACCATTGGAGGGCCACGTGCGGCAGGGTGTCTTTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS CAA 72 bp CTCAGCATTGCCCGCAGCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGGTGTGCCAAGACCCGT +
Preference number: 6 (lower is better)
Translates to: LSIARSSLSNLG*SNRGARCAKTR
Trigger: ACGGGTCTTGGCACACCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAAGGAGCTGCGGGCAATGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
CDS TCA 72 bp TTCCCCAGAGCTCAAAAGGGCTCCAACCACGATCAGTaGGTGAAGCTACTGCCGGATGAGAGTCAGGAACAG +
Preference number: 6 (lower is better)
Translates to: FPRAQKGSNHDQ*VKLLPDESQEQ
Trigger: CTGTTCCTGACTCTCATCCGGCAGTAGCTTCACTCACTGATCGTGGTTGGAGCCCTTTTGAGCTCTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS GCA 72 bp GTGGCAGTGATGGCTGGGTGGGGCTTCATGGAGTGGTaGATGACCAGGATGGCTGGTTCTATGTTCATAATG +
Preference number: 6 (lower is better)
Translates to: VAVMAGWGFMEW*MTRMAGSMFIM
Trigger: CATTATGAACATAGAACCAGCCATCCTGGTCATGCACCACTCCATGAAGCCCCACCCAGCCATCACTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS GCA 72 bp ATCTTGTGGGCTTCGTCACAGCTCGCTTGGACATGCTaGAGCGCCTGGAGAATTGGCGTCTGGCTAAAAACT +
Preference number: 6 (lower is better)
Translates to: ILWASSQLAWTC*SAWRIGVWLKT
Trigger: AGTTTTTAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CCA 72 bp GCTTCGTCACAGCTCGCTTGGACATGCTGCAGCGCCTaGAGAATTGGCGTCTGGCTAAAAACTAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: ASSQLAWTCCSA*RIGVWLKTRGR
Trigger: TCTTCCTCTAGTTTTTAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CCA 72 bp CAAATTCCTTACGCCAAGACCCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACACCCTGCCGCACGTGG +
Preference number: 6 (lower is better)
Translates to: QIPYAKTRFSTM*LREEKTPCRTW
Trigger: CCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACGGGTCTTGGCGTAAGGAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS CAA 72 bp GGGAGGCCTTTGCACACATACGCATTGAGGGCATCATaGGCTTCTCTCTCCGAGACACCAGCAGTCATCGAT +
Preference number: 6 (lower is better)
Translates to: GRPLHTYALRAS*ASLSETPAVID
Trigger: ATCGATGACTGCTGGTGTCTCGGAGAGAGAAGCCAATGATGCCCTCAATGCGTATGTGTGCAAAGGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
CDS CAA 72 bp GTGGAAGGCATACAGTTCTGCTTGGTGTTGGTCAGGTaGAGCCGCAGATTGTCCAAGTGCTCCAGGATCTGC +
Preference number: 6 (lower is better)
Translates to: VEGIQFCLVLVR*SRRLSKCSRIC
Trigger: GCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CAA 72 bp CAGATGTCTGGGAGCTTATTAAACAGCACGCACAGGTaGTTTTATCCCGAGTGTGGGTTGTGGCCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: QMSGSLLNSTHR*FYPECGLWPRV
Trigger: CACCCGGGGCCACAACCCACACTCGGGATAAAACAACCTGTGCGTGCTGTTTAATAAGCTCCCAGACATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS CAA 72 bp CTCAGCATTGCCCGCAGCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGGTGTCGTGCACGTTGT +
Preference number: 6 (lower is better)
Translates to: LSIARSSLSNLG*SNRGARCRARC
Trigger: ACAACGTGCACGACACCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAAGGAGCTGCGGGCAATGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503133.5
ENST00000575708.5
CDS CAA 90 bp AACTTCTCTCTCAGCATTGCCCGCAGCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGGTGTCGTGCACGTTGTCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: NFSLSIARSSLSNLG*SNRGARCRARCQEP
Trigger: TGGCTCCTGACAACGTGCACGACACCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503133.5
ENST00000575708.5
CDS TCA 72 bp GAGCCAACCAATGATGGCCCACCGGGGCAAGATATCTaGACTCAGTACTTCATTAGAAGGGTGGACTACCCC +
Preference number: 6 (lower is better)
Translates to: EPTNDGPPGQDI*TQYFIRRVDYP
Trigger: GGGGTAGTCCACCCTTCTAATGAAGTACTGAGTTCAGATATCTTGCCCCGGTGGGCCATCATTGGTTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000503133.5
ENST00000512605.4
ENST00000571768.5
ENST00000575708.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS TCA 72 bp CGACATTTGACGTGCACGTTGTCAGGAGCCAACCAATaGTGGCCCACCGGGGCAAGATATCTGAACTCAGTA +
Preference number: 6 (lower is better)
Translates to: RHLTCTLSGANQ*WPTGARYLNSV
Trigger: TACTGAGTTCAGATATCTTGCCCCGGTGGGCCATCATTGGTTGGCTCCTGACAACGTGCACGTCAAATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS TCA 72 bp CCAGAGCTCAAAAGGGCTCCAACCACGATCAGTGAGTaGAGCTACTGCCGGATGAGAGTCAGGAACAGAAGA +
Preference number: 6 (lower is better)
Translates to: PELKRAPTTISE*SYCRMRVRNRR
Trigger: TCTTCTGTTCCTGACTCTCATCCGGCAGTAGCTTCACTCACTGATCGTGGTTGGAGCCCTTTTGAGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5
CDS TCA 72 bp TGGAAGGCATACAGTTCTGCTTGGTGTTGGTCAGGTTaGGCCGCAGATTGTCCAAGTGCTCCAGGATCTGCT +
Preference number: 6 (lower is better)
Translates to: WKAYSSAWCWSG*AADCPSAPGSA
Trigger: AGCAGATCCTGGAGCACTTGGACAATCTGCGGCTCAACCTGACCAACACCAAGCAGAACTGTATGCCTTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS GCA 72 bp TACATCTCTTCACCCATTCTGCTGGTCCACCCTGACTaGCATCCCATTACTGCCATCCCTTCACTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: YISSPILLVHPD*HPITAIPSLLR
Trigger: TCTCAGCAGTGAAGGGATGGCAGTAATGGGATGGCAGTCAGGGTGGACCAGCAGAATGGGTGAAGAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CCA 72 bp TACTTTTTACACGCCAAGACCCGTTTCTCCACAATGTaGTTGAGGGAGGAAAAGACACCCTGCCGCACGTGG +
Preference number: 6 (lower is better)
Translates to: YFLHAKTRFSTM*LREEKTPCRTW
Trigger: CCACGTGCGGCAGGGTGTCTTTTCCTCCCTCAACCACATTGTGGAGAAACGGGTCTTGGCGTGTAAAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS CAA 90 bp AACTTCTCTCTCAGCATTGCCCGCAGCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGGTGTGCCAAGACCCGTTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: NFSLSIARSSLSNLG*SNRGARCAKTRFST
Trigger: TGTGGAGAAACGGGTCTTGGCACACCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
CDS CAA 90 bp CCATGTCCGGGGTTAGACGACATGCTAGGAATTTTCGGGATGTTCTaGACTGAAGAAGCTGTAGGATACCTGGGCATGATGGCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: PCPGLDDMLGIFGMF*TEEAVGYLGMMAGA
Trigger: GGCACCTGCCATCATGCCCAGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAATTCCTAGCATGTCGTCTAACCCCGGACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CAA 90 bp GAAGAGATCACTGAATTTCATCTTGTGGGCTTCGTCACAGCTCGCTaGGACATGCTGCAGCGCCTGGAGAATTGGCGTCTGGCTAAAAAC +
Preference number: 6 (lower is better)
Translates to: EEITEFHLVGFVTAR*DMLQRLENWRLAKN
Trigger: GTTTTTAGCCAGACGCCAATTCTCCAGGCGCTGCAGCATGTCCAAGCGAGCTGTGACGAAGCCCACAAGATGAAATTCAGTGATCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000512605.4
ENST00000571829.1
ENST00000576422.4
CDS TCA 72 bp AGGGGTGTGTTAGCCCTGATTCCTCTTTCCCGTTCCTaGCAGAGAGAAGATCCATCCTCTCTCTTTGAGCTG +
Preference number: 6 (lower is better)
Translates to: RGVLALIPLSRS*QREDPSSLFEL
Trigger: CAGCTCAAAGAGAGAGGATGGATCTTCTCTCTGTCAGGAACGGGAAAGAGGAATCAGGGCTAACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 72 bp GACCTGGCTGCTCCCCAAGGAAACCAGATTCTACCTTaGGTCACCATCCTTGTGATTGAGAAACCCCACAGA +
Preference number: 6 (lower is better)
Translates to: DLAAPQGNQILP*VTILVIEKPHR
Trigger: TCTGTGGGGTTTCTCAATCACAAGGATGGTGACTCAAGGTAGAATCTGGTTTCCTTGGGGAGCAGCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS GCA 72 bp CAAGTCAGCCAATCCAATACATCTCTTCACCCATTCTaGTGGTCCACCCTGACTGCCATCCCATTACTGCCA +
Preference number: 6 (lower is better)
Translates to: QVSQSNTSLHPF*WSTLTAIPLLP
Trigger: TGGCAGTAATGGGATGGCAGTCAGGGTGGACCAGCAGAATGGGTGAAGAGATGTATTGGATTGGCTGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CCA 72 bp CAATGCCATACCAGTCTTGGGATAAGAAGCAGGGGCTaGAAGTGCCAAACAGGGAAGAAGTGCCAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: QCHTSLGIRSRG*KCQTGKKCQER
Trigger: TCTTTCCTGGCACTTCTTCCCTGTTTGGCACTTCCAGCCCCTGCTTCTTATCCCAAGACTGGTATGGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CAA 72 bp GTACTGGCGCTGGAACCAATCTTGGTATCGCTTTTGTaGACCAAATCGCACCCGGGATGTCATGAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: VLALEPILVSLL*TKSHPGCHEEE
Trigger: CTCCTCTTCATGACATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGCCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS CAA 72 bp CAGGTACTGGCGCTGGAACCAATCTTGGTATCGCTTTaGTTGACCAAATCGCACCCGGGATGTCATGAAGAG +
Preference number: 6 (lower is better)
Translates to: QVLALEPILVSL*LTKSHPGCHEE
Trigger: CTCTTCATGACATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGCCAGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS CAA 72 bp CTCAGCATTGCCCGCAGCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGGTGTCTAAATGGGGAA +
Preference number: 6 (lower is better)
Translates to: LSIARSSLSNLG*SNRGARCLNGE
Trigger: TTCCCCATTTAGACACCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAAGGAGCTGCGGGCAATGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS TCA 72 bp TACTGGCGCTGGAACCAATCTTGGTATCGCTTTTGTTaGCCAAATCGCACCCGGGATGTCATGAAGAGGAGT +
Preference number: 6 (lower is better)
Translates to: YWRWNQSWYRFC*PNRTRDVMKRS
Trigger: ACTCCTCTTCATGACATCCCGGGTGCGATTTGGTCAACAAAAGCGATACCAAGATTGGTTCCAGCGCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS TCA 72 bp ACTGGGGAGTATGGCTGCAGAGAGAACTGGACTTCCTaGCCACTCCAGGCCACTCAAATGAGAAATTCTTAC +
Preference number: 6 (lower is better)
Translates to: TGEYGCRENWTS*PLQATQMRNSY
Trigger: GTAAGAATTTCTCATTTGAGTGGCCTGGAGTGGTCAGGAAGTCCAGTTCTCTCTGCAGCCATACTCCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS CCA 72 bp AGAACAGCCAGTCATAAAACAAAGCCAGCTTGGCATTaGAGGCAGCGACATTTGACGTGCACGTTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: RTASHKTKPAWH*RQRHLTCTLSG
Trigger: TCCTGACAACGTGCACGTCAAATGTCGCTGCCTCCAATGCCAAGCTGGCTTTGTTTTATGACTGGCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS CCA 72 bp CTCCAGGCCACTCAAATGAGAAATTCTTACTGGACCTaGCTGCTCCCCAAGGAAACCAGATTCTACCTTGAG +
Preference number: 6 (lower is better)
Translates to: LQATQMRNSYWT*LLPKETRFYLE
Trigger: CTCAAGGTAGAATCTGGTTTCCTTGGGGAGCAGCCAGGTCCAGTAAGAATTTCTCATTTGAGTGGCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS TCA 72 bp TCCTCTAAGAGCCAAGAAGACATATGCCCAGCAGTCTaGGGTAGAGCCAATACTTTTTACACGCCAAGACCC +
Preference number: 6 (lower is better)
Translates to: SSKSQEDICPAV*GRANTFYTPRP
Trigger: GGGTCTTGGCGTGTAAAAAGTATTGGCTCTACCTCAGACTGCTGGGCATATGTCTTCTTGGCTCTTAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476843.5
ENST00000575774.5
CDS TCA 72 bp TTGAGCTGGATCTTGTCTTTTCTTTCTGGCCTTACCTaGGTACGGCAGGTATCCTGCAGCTTCAGGTACTTC +
Preference number: 6 (lower is better)
Translates to: LSWILSFLSGLT*VRQVSCSFRYF
Trigger: GAAGTACCTGAAGCTGCAGGATACCTGCCGTACTCAGGTAAGGCCAGAAAGAAAAGACAAGATCCAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 72 bp AGACGACATGCTAGGAATTTTCGGGATGTTCTTGACTaGAGAAGCTGTAGGATACCTGGGCATGATGGCAGG +
Preference number: 6 (lower is better)
Translates to: RRHARNFRDVLD*RSCRIPGHDGR
Trigger: CCTGCCATCATGCCCAGGTATCCTACAGCTTCTTCAGTCAAGAACATCCCGAAAATTCCTAGCATGTCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS GCA 72 bp TATGAAACTCTGTGGGGCAGAATTAACACACAGCAATaGCATACCAGTCTTGGGATAAGAAGCAGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: YETLWGRINTQQ*HTSLGIRSRGW
Trigger: CCAGCCCCTGCTTCTTATCCCAAGACTGGTATGGCATTGCTGTGTGTTAATTCTGCCCCACAGAGTTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CCA 72 bp CTAAAAATACACACACAAAAAGTTAGCCGGGCGTGGTaGTGTGCGCCTGTAATTTCAGCTACTCAGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LKIHTQKVSRAW*CAPVISATQQA
Trigger: AGCCTGCTGAGTAGCTGAAATTACAGGCGCACACCACCACGCCCGGCTAACTTTTTGTGTGTGTATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368670.5
ENST00000573844.5
CDS CAA 72 bp CCCGTTCCTGACAGAGAGAAGATCCATCCTCTCTCTTaGAGCTGGATCTTGTCTTTTCTTTCTGGCCTTACC +
Preference number: 6 (lower is better)
Translates to: PVPDREKIHPLS*SWILSFLSGLT
Trigger: GGTAAGGCCAGAAAGAAAAGACAAGATCCAGCTCAAAGAGAGAGGATGGATCTTCTCTCTGTCAGGAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CAA 90 bp AACTTCTCTCTCAGCATTGCCCGCAGCTCCTTATCCAACTTAGGGTaGTCAAACAGGGGAGCTAGGTGTCTAAATGGGGAACATGATGAA +
Preference number: 6 (lower is better)
Translates to: NFSLSIARSSLSNLG*SNRGARCLNGEHDE
Trigger: TTCATCATGTTCCCCATTTAGACACCTAGCTCCCCTGTTTGACAACCCTAAGTTGGATAAGGAGCTGCGGGCAATGCTGAGAGAGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS TCA 72 bp CTGACTGCCATCCCATTACTGCCATCCCTTCACTGCTaGGATAAACTGCCTTCTGTTCTGTCAGGCTTTAAA +
Preference number: 6 (lower is better)
Translates to: LTAIPLLPSLHC*DKLPSVLSGFK
Trigger: TTTAAAGCCTGACAGAACAGAAGGCAGTTTATCTCAGCAGTGAAGGGATGGCAGTAATGGGATGGCAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 72 bp AGCACAATCAGTCTAACTGGACCATACTCAGATCCCTaGAGGGGGTCAACAGGGAACATGAAGGCATTTGAA +
Preference number: 6 (lower is better)
Translates to: STISLTGPYSDP*RGSTGNMKAFE
Trigger: TTCAAATGCCTTCATGTTCCCTGTTGACCCCCTTCAGGGATCTGAGTATGGTCCAGTTAGACTGATTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS GCA 72 bp CTATGTAGTCTCTGGGCTCTCCTCCTTTCTTCTTTATaGTCCTGCCATCAAACTCACCTGCAATCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: LCSLWALLLSSL*SCHQTHLQSAS
Trigger: TGAAGCAGATTGCAGGTGAGTTTGATGGCAGGAGCATAAAGAAGAAAGGAGGAGAGCCCAGAGACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 72 bp TCCTCTAAGAGCCAAGAAGACATATGCCCAGCAGTCTaGGGTAGAGCCAATACTTTTTACACCTGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: SSKSQEDICPAV*GRANTFYTCQR
Trigger: TCTCTGACAGGTGTAAAAAGTATTGGCTCTACCTCAGACTGCTGGGCATATGTCTTCTTGGCTCTTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS GCA 72 bp CTCCCTTTGCTCTGTCAGGATATCCAGAACACTTTCTaGCAACCAGATATTTTTGGCTGTAACATCTCCACC +
Preference number: 6 (lower is better)
Translates to: LPLLCQDIQNTF*QPDIFGCNIST
Trigger: GGTGGAGATGTTACAGCCAAAAATATCTGGTTGGCAGAAAGTGTTCTGGATATCCTGACAGAGCAAAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000481797.5
ENST00000571768.5
ENST00000575952.5
ENST00000576030.5
CDS CAA 72 bp GTTGAAGAAACTATGATTTCTTCTGGAACCAAAGGATaGGCTCCTAGCTGTTCAGGGGAAGAGAGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: VEETMISSGTKG*APSCSGEESWK
Trigger: CTTCCAGCTCTCTTCCCCTGAACAGCTAGGAGCCAATCCTTTGGTTCCAGAAGAAATCATAGTTTCTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480659.1
ENST00000576641.1
CDS CAA 90 bp AGAGCTGCTACTTTCCCACAGATTGTGAGTTGGAGTGGGAACATTTaGGCCCTTGAAAATGAACGTCTGAGAAGTAGATATAAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: RAATFPQIVSWSGNI*ALENERLRSRYKKP
Trigger: GGGCTTCTTATATCTACTTCTCAGACGTTCATTTTCAAGGGCCAAAATGTTCCCACTCCAACTCACAATCTGTGGGAAAGTAGCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 72 bp TTTAAACAAACACATGCAATCTTGGGAGTAGCCGCTTaGATATGCGATAGCTCAGACAGATGTCACCGATGC +
Preference number: 6 (lower is better)
Translates to: FKQTHAILGVAA*ICDSSDRCHRC
Trigger: GCATCGGTGACATCTGTCTGAGCTATCGCATATTCAAGCGGCTACTCCCAAGATTGCATGTGTTTGTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS TCA 72 bp TGGCCAGAGCTTCTCATTTCTAACTCAACATGGAGTTaGGATAGGTCTAAGCACAATCAGTCTAACTGGACC +
Preference number: 6 (lower is better)
Translates to: WPELLISNSTWS*DRSKHNQSNWT
Trigger: GGTCCAGTTAGACTGATTGTGCTTAGACCTATCTCAACTCCATGTTGAGTTAGAAATGAGAAGCTCTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS CCA 72 bp TTTTACACCTGTCAGAGAAAAGGGCCAGCAGTGCTATaGCAACATTTGGATACACCTGGACCTAATGAAAAA +
Preference number: 6 (lower is better)
Translates to: FYTCQRKGPAVL*QHLDTPGPNEK
Trigger: TTTTTCATTAGGTCCAGGTGTATCCAAATGTTGCCATAGCACTGCTGGCCCTTTTCTCTGACAGGTGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491790.1
ENST00000574879.1
CDS TCA 72 bp CAAAGCAGTTCAAATTCTGGTATCCTAGCAACATTCTaGAGTAGTCTTACGAGATCCCGACCAATCATCAGA +
Preference number: 6 (lower is better)
Translates to: QSSSNSGILATF*SSLTRSRPIIR
Trigger: TCTGATGATTGGTCGGGATCTCGTAAGACTACTTCAGAATGTTGCTAGGATACCAGAATTTGAACTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000318967.7
ENST00000435409.6
ENST00000476843.5
ENST00000480659.1
ENST00000481797.5
ENST00000512605.4
ENST00000571768.5
ENST00000575774.5
ENST00000575952.5
ENST00000576030.5
ENST00000576422.4
ENST00000576641.1
CDS CAA 72 bp ACTTTCCCACAGATTGTGAGTTGGAGTGGGAACATTTaGGCCCTTGAAAATGAACGTCTGAGAAGTAGATAT +
Preference number: 6 (lower is better)
Translates to: TFPQIVSWSGNI*ALENERLRSRY
Trigger: ATATCTACTTCTCAGACGTTCATTTTCAAGGGCCAAAATGTTCCCACTCCAACTCACAATCTGTGGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CAA 90 bp TGTATCAGAAGGAAACAGTCTAAGCAATCCAAGAATTCCATCCCTTaGGCACTTAATCATTCTCCATTGTCTCTATGTAGTCTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: CIRRKQSKQSKNSIP*ALNHSPLSLCSLWA
Trigger: AGCCCAGAGACTACATAGAGACAATGGAGAATGATTAAGTGCCAAAGGGATGGAATTCTTGGATTGCTTAGACTGTTTCCTTCTGATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CAA 90 bp GAGATAAACTGCCTTCTGTTCTGTCAGGCTTTAAAGTTTCACCCTTaGCCTCCAGAAAGAAGGAAAGGGAAGGTTCTGAATTTTTCTAGA +
Preference number: 6 (lower is better)
Translates to: EINCLLFCQALKFHP*PPERRKGKVLNFSR
Trigger: TCTAGAAAAATTCAGAACCTTCCCTTTCCTTCTTTCTGGAGGCAAAGGGTGAAACTTTAAAGCCTGACAGAACAGAAGGCAGTTTATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481797.5
ENST00000575952.5
CDS CCA 72 bp GTGACACCTCACAGCATATACAAACTTAGCTCAAAATaGCTTGTAGGCCTAAATGTAAGAATTAAAGCCACA +
Preference number: 6 (lower is better)
Translates to: VTPHSIYKLSSK*LVGLNVRIKAT
Trigger: TGTGGCTTTAATTCTTACATTTAGGCCTACAAGCCATTTTGAGCTAAGTTTGTATATGCTGTGAGGTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368669.1
ENST00000368670.5
ENST00000571829.1
ENST00000573844.5