RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INTS14 (Homo sapiens)

Ensembl gene IDs: ENSG00000138614

Ensembl transcript IDs: ENST00000313182.6, ENST00000420799.7, ENST00000431261.6, ENST00000442903.3, ENST00000561769.1, ENST00000562830.1, ENST00000563729.1, ENST00000564306.5, ENST00000567744.5, ENST00000567940.1, ENST00000568573.1, ENST00000569004.5, ENST00000569180.1, ENST00000569491.5, ENST00000569565.1, ENST00000573314.5, ENST00000652388.1

Found 671 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCCGGTACTGGCCAGCTTGAGCTGCTGGGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGGGCTGTCTCAGGCAGCAGTGTGCAT +
Preference number: 1 (lower is better)
Translates to: VPVLASLSCWAAWVS*NAASGWAVSGSSVH
Trigger: ATGCACACTGCTGCCTGAGACAGCCCACCCTGATGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 90 bp TCTGGTCATAAGCGGCATACTCAGAGGTGCCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGGTCAGCTGGAATGCAGCATCAGGGT +
Preference number: 1 (lower is better)
Translates to: SGHKRHTQRCRYWPA*AAGQHGSAGMQHQG
Trigger: ACCCTGATGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCGGCACCTCTGAGTATGCCGCTTATGACCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR GCA 90 bp TCAGCTGGAATGCAGCATCAGGGTGGGCTGTCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGTCAGCCACCCCTTTCAGCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: SAGMQHQGGLSQAAV*IPFPACQPPLSAGP
Trigger: TGGACCTGCTGAAAGGGGTGGCTGACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGACAGCCCACCCTGATGCTGCATTCCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 90 bp GTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTaGGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTC +
Preference number: 1 (lower is better)
Translates to: VKLSGSQRAPAGQVS*GRQGCSMLISHSSF
Trigger: GAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR GCA 90 bp GAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGGCAGGGGTGCTCTATaGTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGG +
Preference number: 1 (lower is better)
Translates to: EPLPVRFPEEGRGAL*SSVIQASQEMCPSW
Trigger: CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGCAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR GCA 90 bp GTGGCCATGTGCTCAAACAGCATCGTTAAACCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCGG +
Preference number: 1 (lower is better)
Translates to: VAMCSNSIVKPWAAR*LRWYSSDPSIDTGR
Trigger: CCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTTTGAGCACATGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR GCA 90 bp GTTGATTTTGAGTGGCTAGGGAATGTCGCAGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCACCAGGACAACCTGGCAAGGAATTG +
Preference number: 1 (lower is better)
Translates to: VDFEWLGNVAVTLYQ*QDSRLSPGQPGKEL
Trigger: CAATTCCTTGCCAGGTTGTCCTGGTGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTCAAAATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR CCA 90 bp TGCTCAAACAGCATCGTTAAACCATGGGCTGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAA +
Preference number: 1 (lower is better)
Translates to: CSNSIVKPWAARCLR*YSSDPSIDTGRVME
Trigger: TTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR TCA 90 bp AAATTCTTTCAGTGCTGCTCCCAGAGAAGTCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGGCATACTCAGAGGTGCCGGTACTGG +
Preference number: 1 (lower is better)
Translates to: KFFQCCSQRSPCAKV*CSGHKRHTQRCRYW
Trigger: CCAGTACCGGCACCTCTGAGTATGCCGCTTATGACCAGAACATCACACCTTTGCACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 90 bp TGGGAGAGGTTCTGGGCCAGGCTCAAAGAGAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGCTTGGGAGTAGAGCATTCCATGCCA +
Preference number: 1 (lower is better)
Translates to: WERFWARLKERHHEV*FLLAVSLGVEHSMP
Trigger: TGGCATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACCTCATGATGTCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 90 bp CTAGCCATGGGAGAGGTTCTGGGCCAGGCTCAAAGAGAGACATCATaGGGTTTGATTTCTTCTTGCTGTCAGCTTGGGAGTAGAGCATTC +
Preference number: 1 (lower is better)
Translates to: LAMGEVLGQAQRETS*GLISSCCQLGSRAF
Trigger: GAATGCTCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACCTCATGATGTCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 90 bp GTCACCAGGACAACCTGGCAAGGAATTGCACCACCCCATTCTTGCTaGACGATATTGCAAACACCAACTAATGCAGACTCCAAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: VTRTTWQGIAPPHSC*TILQTPTNADSKQV
Trigger: AACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
3UTR CCA 90 bp GAAAAGGTAGTGGAAACCTGTTGCTCTCACTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTGACCCTCTACCAATGCCAAGACAGC +
Preference number: 1 (lower is better)
Translates to: EKVVETCCSHFVDFE*LGNVAVTLYQCQDS
Trigger: GCTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTCAAAATCAACGAAGTGAGAGCAACAGGTTTCCACTACCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 90 bp CTGGCCTGGGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTC +
Preference number: 1 (lower is better)
Translates to: LAWGRLVHQQLGGHT*EQHGKAYMPNLSVF
Trigger: GAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR CCA 90 bp ACAAAAGGTTCTGGCCTGGGGAAGACTTGTACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCATGGAAAGGCGTATATGCCAAATCT +
Preference number: 1 (lower is better)
Translates to: TKGSGLGKTCTSAVR*PHLRTAWKGVYAKS
Trigger: AGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR CCA 90 bp TCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCT +
Preference number: 1 (lower is better)
Translates to: SKQQVVLLRQPQEGL*VAILEVNILERFLP
Trigger: AGGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR GCA 90 bp CAACCTGGCAAGGAATTGCACCACCCCATTCTTGCTGAACGATATTaGAAACACCAACTAATGCAGACTCCAAGCAGGTTTTGTCATAAT +
Preference number: 1 (lower is better)
Translates to: QPGKELHHPILAERY*KHQLMQTPSRFCHN
Trigger: ATTATGACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
3UTR GCA 90 bp AGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTAT +
Preference number: 1 (lower is better)
Translates to: RGALCSSVIQASQEM*PSWEQQLSSKLKNY
Trigger: ATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR GCA 90 bp GACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTaGCCTTCACCATTGTTTAAATCTATGAGACGTTCAAGGCATTCC +
Preference number: 1 (lower is better)
Translates to: DCTFFKHRGPSIVKI*PSPLFKSMRRSRHS
Trigger: GGAATGCCTTGAACGTCTCATAGATTTAAACAATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR CCA 90 bp AAGACTTGTACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGAC +
Preference number: 1 (lower is better)
Translates to: KTCTSAVRWPHLRTA*KGVYAKSISFPNID
Trigger: GTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR-3UTR TCA 90 bp AGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGGCAGGAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: SFQEAREPLPVRFPEEGRSKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...CCTGCCTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR TCA 90 bp AGCAGGTCCAGGAAACCAAAGGCTAGAGCGGCCTTTCGCAAACGGTTCAGCTCCGCCGGTCAGGTTTCCTaGGGAAGGCAGGGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: SRSRKPKARAAFRKRFSSAGQVS*GRQGCS
Trigger: AGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGC...GGAGCTGAACCGTTTGCGAAAGGCCGCTCTAGCCTTTGGTTTCCTGGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp GGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: GEAFRKPESPCRSGFLRKSKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...CTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp TGGGCTGCTAGGTGCTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCAGTTTACGCGGAGCTaGGGACCCCGAGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: WAARCLRWYSSDPSIDTGQFTRS*GPRASE
Trigger: CTCTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTG...ACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR-3UTR CCA 90 bp TGCTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAACAGTTTACGCGGAGCTaGGGACCCCGAGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: CLRWYSSDPSIDTGRVMEQFTRS*GPRASE
Trigger: CTCTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTG...TTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR-3UTR GCA 90 bp AGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGGCAGGGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: SFQEAREPLPVRFPEEGRASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...CCTGCCTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR GCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp AGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 2 (lower is better)
Translates to: RGEAFRKPESPCRSGFLRPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp GGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGCAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 2 (lower is better)
Translates to: GEAFRKPESPCRSGFLRKQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...CTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp TTTCCTGAGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: FPEEGRGALCSSVIQASQSKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...CTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR TCA 90 bp GCCGTCTGTCACCAGGACAACCTGGCAAGGAATTGCACCACCCCATTCTTGCTGAAGCTCCAGACAGTCTaGGTTGCTCATTCCATGAAC +
Preference number: 2 (lower is better)
Translates to: AVCHQDNLARNCTTPFLLKLQTV*VAHSMN
Trigger: GTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTT...CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGACAGACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR GCA 90 bp TCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACTGTCCAGAGGGCGAAATCGTaGAGTTTACGCGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SIDTGRVMERDTSITTTVQRAKS*SLRGAG
Trigger: CCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTG...GACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR-3UTR CCA 90 bp TGCTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAAGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 2 (lower is better)
Translates to: CLRWYSSDPSIDTGRVMEVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...TTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR GCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAACAGAGGGCGAAATCGTaGAGTTTACGCGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKQRAKS*SLRGAG
Trigger: CCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTG...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CCA 90 bp CAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCCAGTTTACGCGGAGCTaGGGACCCCGAGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: QIYQFSKHRLYILQAQGAQFTRS*GPRASE
Trigger: CTCTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTG...GGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp GTCTCAGGCAGCAGTGTGCATTCCCTTTCCAGCATGTCAGCCACCCCTTTCAGCCAGAACTGGGGGACTTaGAATATCAGCTATATCAAT +
Preference number: 2 (lower is better)
Translates to: VSGSSVHSLSSMSATPFSQNWGT*NISYIN
Trigger: ATTGATATAGCTGATATTTCAAGTCCCCCAGTTCTG...GCTGAAAGGGGTGGCTGACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR GCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp GACCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 2 (lower is better)
Translates to: DPSIDTGRVMERDTSITTTSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...GGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp GCTGAACGATATTGCAAACACCAACTAATGCAGACTCCAAGCAGGTTTTGTCATAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: AERYCKHQLMQTPSRFCHSKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...ATGACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CCA 90 bp TTTCCTGAGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 2 (lower is better)
Translates to: FPEEGRGALCSSVIQASQEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...CTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR TCA 90 bp TGCTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAATCTAAAAGTCCAGACTaGAAATCACATCTGGGAGAT +
Preference number: 2 (lower is better)
Translates to: CLRWYSSDPSIDTGRVMESKSPD*KSHLGD
Trigger: ATCTCCCAGATGTGATTTTCAGTCTGGACTTTTAGA...TTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569565.1
3UTR-3UTR CCA 90 bp GCTCAAACAGCATCGTTAAACCATGGGCTGCTAGGTGCTTACGCTGGTATTCCTACACAGGTCGGGTCATaGAAAGGGATACATCCATTA +
Preference number: 2 (lower is better)
Translates to: AQTASLNHGLLGAYAGIPTQVGS*KGIHPL
Trigger: TAATGGATGTATCCCTTTCCATGACCCGACCTGTGT...AGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR CAA 90 bp TTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACC +
Preference number: 2 (lower is better)
Translates to: FKTASGASEAASGRS*GGYSRGEHTGKVFT
Trigger: GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR CAA 90 bp TCTGGCCTGGGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTT +
Preference number: 2 (lower is better)
Translates to: SGLGKTCTSAVRWPH*RTAWKGVYAKSISF
Trigger: AAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR-3UTR TCA 90 bp CTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGCTCCAGAAACGAGGGAAGAGGTaGAGCTTTCAGGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: LRKVLKLSGGVFVLSKLQKRGKR*SFQEAR
Trigger: TCTGGCTTCCTGAAAGCTTCACCTCTTCCCTCGTTT...CTGGAGCTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR GCA 90 bp TGCAAACACCAACTAATGCAGACTCCAAGCAGGTTTTGTCATAATCATCCATATCAGAGGGCGAAATCGTaGAGTTTACGCGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: CKHQLMQTPSRFCHNHPYQRAKS*SLRGAG
Trigger: CCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTG...ATATGGATGATTATGACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
3UTR-3UTR CCA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 2 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGCCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 2 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp CACAAGTGCTGTAAATTCAAGCTTGTAATTTGTGGCCATGTGCTCAAACAGCATTTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 2 (lower is better)
Translates to: HKCCKFKLVICGHVLKQHLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...ATGCTGTTTGAGCACATGGCCACAAATTACAAGCTTGAATTTACAGCACTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 2 (lower is better)
Translates to: HLHILLILVESFKTASGAPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 2 (lower is better)
Translates to: LHILLILVESFKTASGASKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 2 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR CAA 90 bp TTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTTCACCATaGTTTAAATCTATGAGACGTTCAAGGCATTCCAAGGAATCGGTG +
Preference number: 2 (lower is better)
Translates to: FKHRGPSIVKICPSP*FKSMRRSRHSKESV
Trigger: CACCGATTCCTTGGAATGCCTTGAACGTCTCATAGATTTAAACAATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGCCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 2 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAACCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 2 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 2 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CCA 90 bp GCTTGTAATTTGTGGCCATGTGCTCAAACAGCATCGTTAAACCATGGGCTGCTATCAGTCAAGAAAATGTaGGATCTGGAAGTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: ACNLWPCAQTASLNHGLLSVKKM*DLEVSL
Trigger: AAGAGAGACTTCCAGATCCCACATTTTCTTGACTGA...TAGCAGCCCATGGTTTAACGATGCTGTTTGAGCACATGGCCACAAATTACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR-3UTR CCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGTCAGTCAAGAAAATGTaGGATCTGGAAGTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQSVKKM*DLEVSL
Trigger: AAGAGAGACTTCCAGATCCCACATTTTCTTGACTGA...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGTATTATAATCTCTCGTaGAGGGGACCATCAACTCCC +
Preference number: 2 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGYYNLS*RGPSTP
Trigger: GGGAGTTGATGGTCCCCTTCACGAGAGATTATAATA...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CCA 90 bp ATTGAACAATCGCTACCATTCCTTCCACTTTTAGGCTACCATGGAGCAGGACACTGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 2 (lower is better)
Translates to: IEQSLPFLPLLGYHGAGHCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...GTGTCCTGCTCCATGGTAGCCTAAAAGTGGAAGGAATGGTAGCGATTGTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR TCA 90 bp CTTGCTGAACGATATTGCAAACACCAACTAATGCAGACTCCAAGCAGGTTTTGTAAATGCCCTTACAGTTaGGATATAAACGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: LAERYCKHQLMQTPSRFCKCPYS*DINEGR
Trigger: TCTTCCCTCGTTTATATCTCAACTGTAAGGGCATTT...ACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR GCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGGTTACCACCACATTTTaGCCAAGTTCTAAGGAAAGT +
Preference number: 2 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGVTTTF*PSSKES
Trigger: ACTTTCCTTAGAACTTGGGCAAAATGTGGTGGTAAC...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR GCA 90 bp CCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 2 (lower is better)
Translates to: PNIDCTFFKHRGPSIVKIMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...GATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR-3UTR CCA 90 bp AAAATGATCCCAGTGTTCCCAATCAGAATGCAAACAGACAGCTATAAACGAAGATCAGTCAAGAAAATGTaGGATCTGGAAGTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: KMIPVFPIRMQTDSYKRRSVKKM*DLEVSL
Trigger: AAGAGAGACTTCCAGATCCCACATTTTCTTGACTGA...TCTTCGTTTATAGCTGTCTGTTTGCATTCTGATTGGGAACACTGGGATCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569565.1
ENST00000573314.5
3UTR CCA 72 bp CTGGCCAGCTTGAGCTGCTGGGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGGGCTGTCTCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: LASLSCWAAWVS*NAASGWAVSGS
Trigger: GCTGCCTGAGACAGCCCACCCTGATGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 72 bp AAGCGGCATACTCAGAGGTGCCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGGTCAGCTGGAATGCAG +
Preference number: 3 (lower is better)
Translates to: KRHTQRCRYWPA*AAGQHGSAGMQ
Trigger: CTGCATTCCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCGGCACCTCTGAGTATGCCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR CCA 72 bp TACTCAGAGGTGCCGGTACTGGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGGAATGCAGCATCAGGG +
Preference number: 3 (lower is better)
Translates to: YSEVPVLASLSC*AAWVSWNAASG
Trigger: CCCTGATGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCGGCACCTCTGAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR GCA 72 bp GAGTGGCTAGGGAATGTCGCAGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCACCAGGACAACCTGGC +
Preference number: 3 (lower is better)
Translates to: EWLGNVAVTLYQ*QDSRLSPGQPG
Trigger: GCCAGGTTGTCCTGGTGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CAA 90 bp GCTAGGTGCTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCAAGAAATGCTGCTCTTaGGCTTTCCCGTCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: ARCLRWYSSDPSIDTGRVKKCCS*AFPSAS
Trigger: GGAGGCTGACGGGAAAGCCAAAGAGCAGCATTTCTT...GACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569565.1
3UTR-3UTR CAA 90 bp GCTAGGGAATGTCGCAGTGACCCTCTACCAATGCCAAGACAGCCGTCTGTCACCCAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 3 (lower is better)
Translates to: ARECRSDPLPMPRQPSVTQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...GGTGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CAA 90 bp TCGTTAAACCATGGGCTGCTAGGTGCTTACGCTGGTATTCCTCGGACCCCTCAAATCTGGAAGTCTCTCTaGGAAAGAGGGGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: SLNHGLLGAYAGIPRTPQIWKSL*ERGGRG
Trigger: CCCTCTGCCCCCTCTTTCCAAGAGAGACTTCCAGAT...TTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR TCA 72 bp CAGTGCTGCTCCCAGAGAAGTCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGGCATACTCAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: QCCSQRSPCAKV*CSGHKRHTQRC
Trigger: GCACCTCTGAGTATGCCGCTTATGACCAGAACATCACACCTTTGCACACGGACTTCTCTGGGAGCAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CAA 90 bp GACCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCATCTGGAAGTCTCTCTaGGAAAGAGGGGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: DPSIDTGRVMERDTSITTIWKSL*ERGGRG
Trigger: CCCTCTGCCCCCTCTTTCCAAGAGAGACTTCCAGAT...GGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR-3UTR CAA 90 bp AACAGCATCGTTAAACCATGGGCTGCTAGGTGCTTACGCTGGTATTCCTCGGACGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 3 (lower is better)
Translates to: NSIVKPWAARCLRWYSSDASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...GTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR GCA 72 bp TGCTCAAACAGCATCGTTAAACCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCGGACCCCTCAATAGAC +
Preference number: 3 (lower is better)
Translates to: CSNSIVKPWAAR*LRWYSSDPSID
Trigger: GTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR CCA 72 bp CAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTGAACATACTGGAAAGG +
Preference number: 3 (lower is better)
Translates to: QVVLLRQPQEGL*VAILEVNILER
Trigger: CCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR CCA 72 bp TTTGTGGCCATGTGCTCAAACAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGCTGGTATTCCTCGGAC +
Preference number: 3 (lower is better)
Translates to: FVAMCSNSIVKP*AARCLRWYSSD
Trigger: GTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTTTGAGCACATGGCCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR TCA 72 bp GGAGAGGTTCTGGGCCAGGCTCAAAGAGAGACATCATaGGGTTTGATTTCTTCTTGCTGTCAGCTTGGGAGT +
Preference number: 3 (lower is better)
Translates to: GEVLGQAQRETS*GLISSCCQLGS
Trigger: ACTCCCAAGCTGACAGCAAGAAGAAATCAAACCTCATGATGTCTCTCTTTGAGCCTGGCCCAGAACCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR CCA 72 bp GTGGAAACCTGTTGCTCTCACTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTGACCCTCTACCAATGC +
Preference number: 3 (lower is better)
Translates to: VETCCSHFVDFE*LGNVAVTLYQC
Trigger: GCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTCAAAATCAACGAAGTGAGAGCAACAGGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CAA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 3 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CAA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 3 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR TCA 72 bp ACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTC +
Preference number: 3 (lower is better)
Translates to: TSRVIQNSKWCF*GSLRKVFGWLF
Trigger: GAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR TCA 72 bp AAATCTTCTGTACATCTGTCTGCAGGCCGCTGGGTTTaGTCCAGACAGTCACATTCTGGGCATAACTGCGTT +
Preference number: 3 (lower is better)
Translates to: KSSVHLSAGRWV*SRQSHSGHNCV
Trigger: AACGCAGTTATGCCCAGAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCAGACAGATGTACAGAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR-3UTR CAA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 3 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR-3UTR CAA 90 bp GCTGAACGATATTGCAAACACCAACTAATGCAGACTCCAAGCAGGTTTTGTCATATCTGGAAGTCTCTCTaGGAAAGAGGGGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: AERYCKHQLMQTPSRFCHIWKSL*ERGGRG
Trigger: CCCTCTGCCCCCTCTTTCCAAGAGAGACTTCCAGAT...ATGACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
3UTR TCA 72 bp ACAACCTGGCAAGGAATTGCACCACCCCATTCTTGCTaGACGATATTGCAAACACCAACTAATGCAGACTCC +
Preference number: 3 (lower is better)
Translates to: TTWQGIAPPHSC*TILQTPTNADS
Trigger: GGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
3UTR TCA 72 bp TTCTGGGCCAGGCTCAAAGAGAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGCTTGGGAGTAGAGCAT +
Preference number: 3 (lower is better)
Translates to: FWARLKERHHEV*FLLAVSLGVEH
Trigger: ATGCTCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACCTCATGATGTCTCTCTTTGAGCCTGGCCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR TCA 72 bp GGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCGTATATGCCAAATCTA +
Preference number: 3 (lower is better)
Translates to: GRLVHQQLGGHT*EQHGKAYMPNL
Trigger: TAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR GCA 72 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAGCTATCTTCCAAGCTT +
Preference number: 3 (lower is better)
Translates to: LCSSVIQASQEM*PSWEQQLSSKL
Trigger: AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR GCA 72 bp TGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTaGTCATTCCATGAACAGAAGCTTGAAAATGCCCTT +
Preference number: 3 (lower is better)
Translates to: CVCTQQAPDSLS*SFHEQKLENAL
Trigger: AAGGGCATTTTCAAGCTTCTGTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
3UTR GCA 72 bp AAGGAATTGCACCACCCCATTCTTGCTGAACGATATTaGAAACACCAACTAATGCAGACTCCAAGCAGGTTT +
Preference number: 3 (lower is better)
Translates to: KELHHPILAERY*KHQLMQTPSRF
Trigger: AAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
3UTR CCA 72 bp ACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAATCTATCAGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: TSAVRWPHLRTA*KGVYAKSISFP
Trigger: TGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR GCA 72 bp GTGGCCACACTTGAGAACAGCATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCCAAACATAGACTGTAC +
Preference number: 3 (lower is better)
Translates to: VATLENSMERRI*QIYQFSKHRLY
Trigger: GTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR-3UTR CAA 90 bp CAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 3 (lower is better)
Translates to: QIYQFSKHRLYILQAQGATELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...GGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
3UTR GCA 72 bp TTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTaGCCTTCACCATTGTTTAAATCTATGAGACGTTCA +
Preference number: 3 (lower is better)
Translates to: FFKHRGPSIVKI*PSPLFKSMRRS
Trigger: TGAACGTCTCATAGATTTAAACAATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573314.5
3UTR CCA 72 bp TCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCCAAGCTTAAAAATTAT +
Preference number: 3 (lower is better)
Translates to: SVIQASQEMCPS*EQQLSSKLKNY
Trigger: ATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GAGCAGAGGGCGAAATCGTGCAGTTTACGCGGAGCTGGGGACCCCGAGCCTCAGGCAGCGCCCCGGAACTaGCGCCTCACAGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: EQRAKSCSLRGAGDPEPQAAPRN*RLTDSA
Trigger: CGCGCTGTCTGTGAGGCGCCAGTTCCGGGGCGCTGC...CTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp GGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGGCAGCGCCCCGGAACTaGCGCCTCACAGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: GEAFRKPESPCRSGFLRKAAPRN*RLTDSA
Trigger: CGCGCTGTCTGTGAGGCGCCAGTTCCGGGGCGCTGC...CTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR GCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAAGGGAATCCGGCGCCTaGACTCCGCGCTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILRESGA*TPRWAG
Trigger: CCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCT...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000652388.1
CDS-3UTR CCA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACGCCTGCACTCCGCGCTaGGCGGGGCGGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNACTPR*AGRSLE
Trigger: CTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGC...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431261.6
ENST00000442903.3
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGAGGGGAGCTGAGCAGAGGGCGAAATCGTGCAGTTTACGCGGAGCTGGGGACCAGAGGGCGAAATCGTaGAGTTTACGCGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QRGAEQRAKSCSLRGAGDQRAKS*SLRGAG
Trigger: CCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTG...GTCCCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTGCTCAGCTCCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR GCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGGAATCCGGCGCCTaGACTCCGCGCTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILERESGA*TPRWAG
Trigger: CCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000652388.1
CDS-3UTR TCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTAAGGGAATCCGGCGCCTaGACTCCGCGCTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILRESGA*TPRWAG
Trigger: CCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCT...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGAGGGGAGCTGAGCAGAGGGCGAAATCGTGCAGTTTACGCGGAGCTGGGGACGGGCTGCAGGGGGAATaGACTCTTATTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QRGAEQRAKSCSLRGAGDGLQGE*TLIVIL
Trigger: GAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCC...GTCCCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTGCTCAGCTCCCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp AGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAAGCAGCGCCCCGGAACTaGCGCCTCACAGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: RSGHGKGYIHYHHCRHDEAAPRN*RLTDSA
Trigger: CGCGCTGTCTGTGAGGCGCCAGTTCCGGGGCGCTGC...TTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR TCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAGGGAATCCGGCGCCTaGACTCCGCGCTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLRESGA*TPRWAG
Trigger: CCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCT...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000652388.1
CDS-3UTR GCA 90 bp ACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGTCCCCACTCACCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: TGRVMERDTSITTTVGMMSPLTP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGGTGAGTGGGGA...CATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR GCA 90 bp GCTAGGTGCTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCCAGAGGGCGAAATCGTaGAGTTTACGCGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ARCLRWYSSDPSIDTGRVQRAKS*SLRGAG
Trigger: CCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTG...GACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLARCLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILASLSC*AAWVSW
Trigger: CCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGC...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCTTTGGCTTTCCCGTCAGCCTCCGGGAGTCCCTCCCCAGTTCTCAGATATAATCAGTTTACGCGGAGCTaGGGACCCCGAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLAFPSASGSPSPVLRYNQFTRS*GPRASE
Trigger: CTCTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTG...ATTATATCTGAGAACTGGGGAGGGACTCCCGGAGGCTGACGGGAAAGCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569565.1
CDS-3UTR TCA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGG +
Preference number: 4 (lower is better)
Translates to: GEAFRKPESPCRSGFLRKPCAKV*CSGHKR
Trigger: CCGCTTATGACCAGAACATCACACCTTTGCACACGG...CTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCAGGGAATCCGGCGCCTaGACTCCGCGCTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTRESGA*TPRWAG
Trigger: CCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000652388.1
CDS-3UTR GCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGGCAGGAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: SFQEAREPLPVRFPEEGRNCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...CCTGCCTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCGCCTGCACTCCGCGCTaGGCGGGGCGGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTACTPR*AGRSLE
Trigger: CTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGC...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000431261.6
ENST00000442903.3
ENST00000652388.1
CDS-3UTR TCA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAGCAGAGGGCGAAATCGTGCAGTTTACGCGGAGCTGGGGACCCCGAGCCTCAGGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: EQRAKSCSLRGAGDPEPQGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...CTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILAAWVS*NAASGW
Trigger: CCACCCTGATGCTGCATTCCAGCTGACCCATGCTGC...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVASLSC*AAWVSW
Trigger: CCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGC...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GEAFRKPESPCRSGFLRKPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...CTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCAGTTTACGCGGAGCTaGGGACCCCGAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHQFTRS*GPRASE
Trigger: CTCTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTG...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR TCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTCGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GTTAAACCATGGGCTGCTAGGTGCTTACGCTGGTATTCCTCGGACCCCTCAATAAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VKPWAARCLRWYSSDPSISKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...TATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACGAAGAAATGCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHTKKCP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGCATTTCTTCGT...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000442903.3
CDS-3UTR GCA 90 bp AGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGGCAGGCATTCTGGGCATAACTaGGTTTGTTTTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SFQEAREPLPVRFPEEGRHSGHN*VCFWAA
Trigger: TGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATG...CCTGCCTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAATCCCCACTCACCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHESPLTP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGGTGAGTGGGGA...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGACAGAGGGCGAAATCGTaGAGTTTACGCGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGQRAKS*SLRGAG
Trigger: CCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTG...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGCAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHAAWVS*NAASGW
Trigger: CCACCCTGATGCTGCATTCCAGCTGACCCATGCTGC...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVASLSC*AAWVSW
Trigger: CCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGC...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGGCCTGCACTCCGCGCTaGGCGGGGCGGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKACTPR*AGRSLE
Trigger: CTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGC...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAGGGCGGGGCGGTCCTTaGAGAGCTTCAGGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLGRGGP*RASGSP
Trigger: GGGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCC...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442903.3
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAGGGAAGGCCAAGCGCTaGCCCTGGGTTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILEGKAKR*PWVVLH
Trigger: GTGAAGAACAACCCAGGGCCAGCGCTTGGCCTTCCC...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGGGGAAGGCCAAGCGCTaGCCCTGGGTTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVGKAKR*PWVVLH
Trigger: GTGAAGAACAACCCAGGGCCAGCGCTTGGCCTTCCC...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR TCA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGG +
Preference number: 4 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNPCAKV*CSGHKR
Trigger: CCGCTTATGACCAGAACATCACACCTTTGCACACGG...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILESKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAAGCCGGTCAGGTTTCCTaGGGAAGGCAGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHEAGQVS*GRQGCS
Trigger: AGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGC...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp ACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAACAGAAGCTTGAAGCCGGTCAGGTTTCCTaGGGAAGGCAGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TQQAPDSLSCSFHEQKLEAGQVS*GRQGCS
Trigger: AGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGC...TTCAAGCTTCTGTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AACAGCATCGTTAAACCATGGGCTGCTAGGTGCTTACGCTGGTATTCCTCGGACCCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: NSIVKPWAARCLRWYSSDPWAAR*LRWYSS
Trigger: CGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGG...GTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR GCA 90 bp GCCGTCTGTCACCAGGACAACCTGGCAAGGAATTGCACCACCCCATTCTTGCTGATTCCAAGGAATCGGTaGTCTGGAGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: AVCHQDNLARNCTTPFLLIPRNR*SGAPPN
Trigger: ATTTGGAGGAGCTCCAGAGCACCGATTCCTTGGAAT...CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGACAGACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp GTCTCAGGCAGCAGTGTGCATTCCCTTTCCAGCATGTCAGCCACCCCTTTCAGCCGTTTGTTTTTGGGCTaGAGGGGGAATGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: VSGSSVHSLSSMSATPFSRLFLG*RGNGLL
Trigger: TAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG...GCTGAAAGGGGTGGCTGACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTAAAGCCAGAGAGCCCCTaGCGGTCAGGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILKPESP*RSGFLR
Trigger: CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTT...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AACCAAAGGCTAGAGCGGCCTTTCGCAAACGGTTCAGCTCCTTATAGAATGTCTAAGCCAGAGAGCCCCTaGCGGTCAGGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NQRLERPFANGSAPYRMSKPESP*RSGFLR
Trigger: CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTT...AGACATTCTATAAGGAGCTGAACCGTTTGCGAAAGGCCGCTCTAGCCTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGACCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGAGCTGCTGGGCAGCATaGGTCAGCTGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKSCWAA*VSWNAA
Trigger: TGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCT...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKASLSC*AAWVSW
Trigger: CCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGC...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GAGTTACCACCACATTTTGCCCAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGGCGGGGCGGTCCTTaGAGAGCTTCAGGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: ELPPHFAQVLRKVLKLSGGRGGP*RASGSP
Trigger: GGGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCC...ACCACTAAGTTTCAGAACTTTCCTTAGAACTTGGGCAAAATGTGGTGGTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652388.1
CDS-3UTR TCA 90 bp CTGGGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATGGTTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LGKTCTSAVRWPHLRTAWLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...CCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp ACAAAAGGTTCTGGCCTGGGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: TKGSGLGKTCTSAVRWPHLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...GTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAASKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCCGGTCAGGTTTCCTaGGGAAGGCAGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTAGQVS*GRQGCS
Trigger: AGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGC...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGCCGGTCAGGTTTCCTaGGGAAGGCAGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNAGQVS*GRQGCS
Trigger: AGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTACGAAGAAATGCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAATKKCP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGCATTTCTTCGT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313182.6
ENST00000431261.6
CDS-3UTR GCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTACGAAGAAATGCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVTKKCP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGCATTTCTTCGT...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000442903.3
CDS-3UTR GCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAAAGCCAGAGAGCCCCTaGCGGTCAGGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASKPESP*RSGFLR
Trigger: CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTT...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAACAAACAGACAGCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKQTDSP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGCTGTCTGTTTG...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569491.5
CDS-3UTR CCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKARCLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp ACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATGGAAAGGCGTATATGCCGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: TSAVRWPHLRTAWKGVYAARCLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC...GGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILSIVKP*AARCLR
Trigger: GCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCT...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGAAGCAAGCTTGTAATTTGTaGCCATGTGCTCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: GEAFRKPESPCRSGFLRKQACNL*PCAQTA
Trigger: TGCTGTTTGAGCACATGGCCACAAATTACAAGCTTG...CTTCCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAACCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILEPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGCCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNNCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILNCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGAGCTGCTGGGCAGCATaGGTCAGCTGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWSCWAA*VSWNAA
Trigger: TGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCT...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAGCTGCTGGGCAGCATaGGTCAGCTGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLSCWAA*VSWNAA
Trigger: TGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCT...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GTGGAAACCTGTTGCTCTCACTTCGTTGATTTTGAGTGGCTAGGGAATGTCGCAAGCTGCTGGGCAGCATaGGTCAGCTGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: VETCCSHFVDFEWLGNVASCWAA*VSWNAA
Trigger: TGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCT...TGCGACATTCCCTAGCCACTCAAAATCAACGAAGTGAGAGCAACAGGTTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTASLSC*AAWVSW
Trigger: CCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGC...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNASLSC*AAWVSW
Trigger: CCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTGTAATTTGTGGCCATGTGCTCAAACAGCATCGTTAAACCATGGGCTGCTAGGGAAGGCCAAGCGCTaGCCCTGGGTTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ACNLWPCAQTASLNHGLLGKAKR*PWVVLH
Trigger: GTGAAGAACAACCCAGGGCCAGCGCTTGGCCTTCCC...TAGCAGCCCATGGTTTAACGATGCTGTTTGAGCACATGGCCACAAATTACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp AGAACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACGCAGCGCCCCGGAACTaGCGCCTCACAGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: RTAWKGVYAKSISFPNIDAAPRN*RLTDSA
Trigger: CGCGCTGTCTGTGAGGCGCCAGTTCCGGGGCGCTGC...GTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp ATGGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCACAGTTTACGCGGAGCTaGGGACCCCGAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: MERDTSITTTVGMMKMIPQFTRS*GPRASE
Trigger: CTCTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTG...TGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR TCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAATTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILELGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGTTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGG +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKPCAKV*CSGHKR
Trigger: CCGCTTATGACCAGAACATCACACCTTTGCACACGG...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGG +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHPCAKV*CSGHKR
Trigger: CCGCTTATGACCAGAACATCACACCTTTGCACACGG...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAACGAGGGAAGAGGTaGAGCTTTCAGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGKRGKR*SFQEAR
Trigger: TCTGGCTTCCTGAAAGCTTCACCTCTTCCCTCGTTT...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AACGAAGAAATGCTGCTCTTTGGCTTTCCCGTCAGCCTCCGGGAGTCCCTCCCCTCTAAAAGTCCAGACTaGAAATCACATCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: NEEMLLFGFPVSLRESLPSKSPD*KSHLGD
Trigger: ATCTCCCAGATGTGATTTTCAGTCTGGACTTTTAGA...GGGGAGGGACTCCCGGAGGCTGACGGGAAAGCCAAAGAGCAGCATTTCTTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569565.1
CDS-3UTR GCA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTCCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLPWAAR*LRWYSS
Trigger: CGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGG...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR GCA 90 bp TCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSDPSIDTGRVMERDTSINLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...AATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR GCA 90 bp GACCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DPSIDTGRVMERDTSITTNLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...GGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR GCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACGTTTGTTTTTGGGCTaGAGGGGGAATGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILRLFLG*RGNGLL
Trigger: TAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GACCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCCCAGAGAAGTCCGTGTaGAAAGGTGTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: DPSIDTGRVMERDTSITTPEKSV*KGVMFW
Trigger: CCAGAACATCACACCTTTGCACACGGACTTCTCTGG...GGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATTGTTCCCAATCAGAATaGAAACAGACAGCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHCSQSE*KQTARA
Trigger: GGCACGGGCTGTCTGTTTGCATTCTGATTGGGAACA...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569491.5
CDS-3UTR CCA 90 bp AGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: RKAGVLYAHQSFKLLRKCARCLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC...ACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp ACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: TGRVMERDTSITTTVGMMSIVKP*AARCLR
Trigger: GCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCT...CATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACCAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTACCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAGGGCTGCAGGGGGAATaGACTCTTATTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILEGLQGE*TLIVIL
Trigger: GAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCC...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHNCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQAAWVS*NAASGW
Trigger: CCACCCTGATGCTGCATTCCAGCTGACCCATGCTGC...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAGTGGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ERDTSITTTVGMMKMIPVAAWVS*NAASGW
Trigger: CCACCCTGATGCTGCATTCCAGCTGACCCATGCTGC...CACTGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp AAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAGTGTTGGGAAGGCCAAGCGCTaGCCCTGGGTTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KGYIHYHHCRHDENDPSVGKAKR*PWVVLH
Trigger: GTGAAGAACAACCCAGGGCCAGCGCTTGGCCTTCCC...AACACTGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp CTGGGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATGGAAGGAATCGGTGCTCTaGAGCTGTTGCTCTCACTTC +
Preference number: 4 (lower is better)
Translates to: LGKTCTSAVRWPHLRTAWKESVL*SCCSHF
Trigger: GAAGTGAGAGCAACAGCTCCAGAGCACCGATTCCTT...CCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569004.5
3UTR CAA 72 bp GCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGTGAACATACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ASGASEAASGRS*GGYSRGEHTGK
Trigger: CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TGCTTACGCTGGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAATATTATAATCTCTCGTaGAGGGGACCATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: CLRWYSSDPSIDTGRVMEYYNLS*RGPSTP
Trigger: GGGAGTTGATGGTCCCCTTCACGAGAGATTATAATA...TTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCAGCGTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR TCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATCCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTATTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGTGCAATCTGATTGGCTaGATTTTCATCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RGEAFRKPESPCRSGFLRCNLIG*IFIFIV
Trigger: GACAATGAAGATGAAAATTCAGCCAATCAGATTGCA...CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAACGGTACTGGCCAGCTTaGGCTGCTGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: FSKHRLYILQAQGAINSKRYWPA*AAGQHG
Trigger: CCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCG...TTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGG +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAAPCAKV*CSGHKR
Trigger: CCGCTTATGACCAGAACATCACACCTTTGCACACGG...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTASKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGCCGGTCAGGTTTCCTaGGGAAGGCAGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASAGQVS*GRQGCS
Trigger: AGAGCACCCCTGCCTTCCTCAGGAAACCTGACCGGC...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGAAACGAGGGAAGAGGTaGAGCTTTCAGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVKRGKR*SFQEAR
Trigger: TCTGGCTTCCTGAAAGCTTCACCTCTTCCCTCGTTT...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCACCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASPWAAR*LRWYSS
Trigger: CGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGG...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR GCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAACCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKPWAAR*LRWYSS
Trigger: CGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGG...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR GCA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGAAGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRGEAFRKPESPCRSGFLMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...CAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RGEAFRKPESPCRSGFLRMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACATTCTGGGCATAACTaGGTTTGTTTTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILHSGHN*VCFWAA
Trigger: TGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGTCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKSQAAV*IPFPAC
Trigger: ACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGA...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTCAAACAGCATCGTTAAACCATGGGCTGCTAGGTGCTTACGCTGGTATTCCTTCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: AQTASLNHGLLGAYAGIPSQAAV*IPFPAC
Trigger: ACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGA...AGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAACCAGAGAAGTCCGTGTaGAAAGGTGTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILEPEKSV*KGVMFW
Trigger: CCAGAACATCACACCTTTGCACACGGACTTCTCTGG...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILEASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATGGCAGGGGTGCTCTATaGTCATCAGTCATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHGRGAL*SSVIQA
Trigger: AGCTTGAATGACTGATGAGCATAGAGCACCCCTGCC...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTAAGCCAGAGAGCCCCTaGCGGTCAGGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAKPESP*RSGFLR
Trigger: CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTT...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGCTTAGTGCTTCCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKLSASP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGGAAGCACTAAG...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420799.7
ENST00000652388.1
CDS-3UTR GCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCACAGAGGGCGAAATCGTaGAGTTTACGCGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTAQRAKS*SLRGAG
Trigger: CCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTG...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFARCLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTATTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGACAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGTGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: RGEAFRKPESPCRSGFLRCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCACCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHNCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTAAWVS*NAASGW
Trigger: CCACCCTGATGCTGCATTCCAGCTGACCCATGCTGC...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAAGCTGCTGGGCAGCATaGGTCAGCTGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTSCWAA*VSWNAA
Trigger: TGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCT...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGGCCAGCTTGAGCTGCTaGGCAGCATGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGASLSC*AAWVSW
Trigger: CCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGC...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: PLNRHRSGHGKGYIHYHHEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...GTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATTACTTAGTGCTTCGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHYLVLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGAAGCACTAAGTA...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431261.6
CDS-3UTR TCA 90 bp ACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATGGAAAGGCGTATATGCCCCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: TSAVRWPHLRTAWKGVYAPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...GGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTATTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLSKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTTCCCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: RLYILQAQGAINSKNLPFPWAAR*LRWYSS
Trigger: CGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGG...GAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR GCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAANLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWNLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TTTCCTGAGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGCGTTTGTTTTTGGGCTaGAGGGGGAATGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: FPEEGRGALCSSVIQASQRLFLG*RGNGLL
Trigger: TAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG...CTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATCATTCTGGGCATAACTaGGTTTGTTTTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHHSGHN*VCFWAA
Trigger: TGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATG...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGTCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWSQAAV*IPFPAC
Trigger: ACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGA...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTACCAGAGAAGTCCGTGTaGAAAGGTGTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILPEKSV*KGVMFW
Trigger: CCAGAACATCACACCTTTGCACACGGACTTCTCTGG...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GTTAAACCATGGGCTGCTAGGTGCTTACGCTGGTATTCCTCGGACCCCTCAATAAAATTCTTTCAGTGCTaGTCCCAGAGAAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: VKPWAARCLRWYSSDPSIKFFQC*SQRSPC
Trigger: ACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT...TATTGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATAAATTCTTTCAGTGCTaGTCCCAGAGAAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHKFFQC*SQRSPC
Trigger: ACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGGCAGGGGTGCTCTATaGTCATCAGTCATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWGRGAL*SSVIQA
Trigger: AGCTTGAATGACTGATGAGCATAGAGCACCCCTGCC...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGAAGCCAGAGAGCCCCTaGCGGTCAGGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGKPESP*RSGFLR
Trigger: CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTT...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGCTTAGTGCTTCCCCGTaGCCATCGCCGGACACAGTC +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMLSASP*PSPDTV
Trigger: GACTGTGTCCGGCGATGGGCACGGGGAAGCACTAAG...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420799.7
ENST00000652388.1
CDS-3UTR CCA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLSIVKP*AARCLR
Trigger: GCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCT...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GAATTGCACCACCCCATTCTTGCTGAACGATATTGCAAACACCAACTAATGCAGGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: ELHHPILAERYCKHQLMQVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR CCA 90 bp ACAAAAGGTTCTGGCCTGGGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: TKGSGLGKTCTSAVRWPHFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...GTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILETSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGATACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCACCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTAPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAGGGCTGCAGGGGGAATaGACTCTTATTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLGLQGE*TLIVIL
Trigger: GAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCC...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAGGGCTGCAGGGGGAATaGACTCTTATTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKGLQGE*TLIVIL
Trigger: GAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCC...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAANCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLAAWVS*NAASGW
Trigger: CCACCCTGATGCTGCATTCCAGCTGACCCATGCTGC...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGAGCTGCTGGGCAGCATaGGTCAGCTGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKSCWAA*VSWNAA
Trigger: TGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCT...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAAGCTGCTGGGCAGCATaGGTCAGCTGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLSCWAA*VSWNAA
Trigger: TGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RKAGVLYAHQSFKLLRKCPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...ACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CATGATGAAAATGATCCCAGTGTTCCCAATCAGAATGCAAACAGACAGCTTAAACAGTTTACGCGGAGCTaGGGACCCCGAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HDENDPSVPNQNANRQLKQFTRS*GPRASE
Trigger: CTCTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTG...TTTAAGCTGTCTGTTTGCATTCTGATTGGGAACACTGGGATCATTTTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567940.1
CDS-3UTR TCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTACCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTCCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAAPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACATTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGG +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTPCAKV*CSGHKR
Trigger: CCGCTTATGACCAGAACATCACACCTTTGCACACGG...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKSKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTAGCAAGTGGTGCTTCTaGGGCAGCCTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASSKWCF*GSLRKV
Trigger: GACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCT...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAGTGAAACGAGGGAAGAGGTaGAGCTTTCAGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ERDTSITTTVGMMKMIPVKRGKR*SFQEAR
Trigger: TCTGGCTTCCTGAAAGCTTCACCTCTTCCCTCGTTT...CACTGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTATCTAAAAGTCCAGACTaGAAATCACATCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILSKSPD*KSHLGD
Trigger: ATCTCCCAGATGTGATTTTCAGTCTGGACTTTTAGA...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567744.5
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLPWAAR*LRWYSS
Trigger: CGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGG...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR GCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQNLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGCGTTTGTTTTTGGGCTaGAGGGGGAATGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWRLFLG*RGNGLL
Trigger: TAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTCGTTTGTTTTTGGGCTaGAGGGGGAATGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLRLFLG*RGNGLL
Trigger: TAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAACATTCTGGGCATAACTaGGTTTGTTTTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILEHSGHN*VCFWAA
Trigger: TGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATG...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFSQAAV*IPFPAC
Trigger: ACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGA...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCATCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASSQAAV*IPFPAC
Trigger: ACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGA...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCCAGAGAAGTCCGTGTaGAAAGGTGTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQPEKSV*KGVMFW
Trigger: CCAGAACATCACACCTTTGCACACGGACTTCTCTGG...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATAAATTCTTTCAGTGCTaGTCCCAGAGAAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHKFFQC*SQRSPC
Trigger: ACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAACACAGGTCGGGTCATaGAAAGGGATACATCCATTA +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILETQVGS*KGIHPL
Trigger: TAATGGATGTATCCCTTTCCATGACCCGACCTGTGT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CTTGCTGAACGATATTGCAAACACCAACTAATGCAGACTCCAAGCAGGTTTTGTGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: LAERYCKHQLMQTPSRFCARCLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC...ACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR CCA 90 bp GCTTGTAATTTGTGGCCATGTGCTCAAACAGCATCGTTAAACCATGGGCTGCTAAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: ACNLWPCAQTASLNHGLLSIVKP*AARCLR
Trigger: GCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCT...TAGCAGCCCATGGTTTAACGATGCTGTTTGAGCACATGGCCACAAATTACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLTSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGTACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGCCATGGGAGAGGTTCTaGGCCAGGCTCAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKPWERF*ARLKER
Trigger: TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGG...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAGGGCTGCAGGGGGAATaGACTCTTATTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTAGLQGE*TLIVIL
Trigger: GAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCC...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCGGGCTGCAGGGGGAATaGACTCTTATTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTGLQGE*TLIVIL
Trigger: GAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCC...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKNCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTTATTATAATCTCTCGTaGAGGGGACCATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: RKAGVLYAHQSFKLLRKCYYNLS*RGPSTP
Trigger: GGGAGTTGATGGTCCCCTTCACGAGAGATTATAATA...ACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR TCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCACCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTATTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGCCGTGTGCAAAGGTGTaGTGTTCTGGTCATAAGCGG +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKPCAKV*CSGHKR
Trigger: CCGCTTATGACCAGAACATCACACCTTTGCACACGG...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATCTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGACTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTTCACCATTGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: YILQAQGAINSKNLPFTIVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...AATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR GCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGATTCCAAGGAATCGGTaGTCTGGAGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQIPRNR*SGAPPN
Trigger: ATTTGGAGGAGCTCCAGAGCACCGATTCCTTGGAAT...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAATTCCAAGGAATCGGTaGTCTGGAGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASIPRNR*SGAPPN
Trigger: ATTTGGAGGAGCTCCAGAGCACCGATTCCTTGGAAT...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TTTCCTGAGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FPEEGRGALCSSVIQASQGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...CTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCACGTTTGTTTTTGGGCTaGAGGGGGAATGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASRLFLG*RGNGLL
Trigger: TAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACATCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTSQAAV*IPFPAC
Trigger: ACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGA...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCCCAGAGAAGTCCGTGTaGAAAGGTGTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTPEKSV*KGVMFW
Trigger: CCAGAACATCACACCTTTGCACACGGACTTCTCTGG...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTAAAATTCTTTCAGTGCTaGTCCCAGAGAAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILKFFQC*SQRSPC
Trigger: ACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCGGCAGGGGTGCTCTATaGTCATCAGTCATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTGRGAL*SSVIQA
Trigger: AGCTTGAATGACTGATGAGCATAGAGCACCCCTGCC...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGTGTTCCCAATCAGAATaGAAACAGACAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVCSQSE*KQTAAL
Trigger: AAGAGCAGCTGTCTGTTTGCATTCTGATTGGGAACA...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567744.5
CDS-3UTR CCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGACACAGGTCGGGTCATaGAAAGGGATACATCCATTA +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWTQVGS*KGIHPL
Trigger: TAATGGATGTATCCCTTTCCATGACCCGACCTGTGT...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
CDS-3UTR CCA 90 bp ACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATGGAAAGGCGTATATGCCCAAGCTTGTAATTTGTaGCCATGTGCTCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: TSAVRWPHLRTAWKGVYAQACNL*PCAQTA
Trigger: TGCTGTTTGAGCACATGGCCACAAATTACAAGCTTG...GGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp TTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTTCACCATTGTTTAAAGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: FKHRGPSIVKICPSPLFKVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...TTTAAACAATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAAFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILEHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASTSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTACAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTTACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAAYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATTACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTATACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTAVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACTGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAACTTTTAGGCTACCATaGAGCAGGACACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILETFRLP*SRTQKL
Trigger: CAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAAACTTTTAGGCTACCATaGAGCAGGACACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RSGHGKGYIHYHHCRHDETFRLP*SRTQKL
Trigger: CAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGT...TTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAGCAGCATGGGTCAGCTaGAATGCAGCATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEAAWVS*NAASGW
Trigger: CCACCCTGATGCTGCATTCCAGCTGACCCATGCTGC...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGCTCCAGCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRKVLKLSGGVFVLSKLQPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...CTGGAGCTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTTCAGTCAAGAAAATGTaGGATCTGGAAGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSDPSIDTGRVMERDTSISVKKM*DLEVSL
Trigger: AAGAGAGACTTCCAGATCCCACATTTTCTTGACTGA...AATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
3UTR CAA 72 bp GGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGCGTATATGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: GKTCTSAVRWPH*RTAWKGVYAKS
Trigger: AGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAATATTATAATCTCTCGTaGAGGGGACCATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKYYNLS*RGPSTP
Trigger: GGGAGTTGATGGTCCCCTTCACGAGAGATTATAATA...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR TCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTATTATAATCTCTCGTaGAGGGGACCATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFYYNLS*RGPSTP
Trigger: GGGAGTTGATGGTCCCCTTCACGAGAGATTATAATA...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR TCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCCCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGACATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATCATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGTTAGGTGGCCACACTTaGGAACAGCATGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMLGGHT*EQHGKA
Trigger: CGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAA...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCAGAACTGGGGGACTTaGAATATCAGCTATATCAAT +
Preference number: 4 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVQNWGT*NISYIN
Trigger: ATTGATATAGCTGATATTTCAAGTCCCCCAGTTCTG...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTCATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTCATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTCATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAAHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LISHSSFSGNVPIMGTAARHHEV*FLLAVS
Trigger: GCTGACAGCAAGAAGAAATCAAACCTCATGATGTCT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVRHHEV*FLLAVS
Trigger: GCTGACAGCAAGAAGAAATCAAACCTCATGATGTCT...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKAGVLYAHQSFKLLRKCRHHEV*FLLAVS
Trigger: GCTGACAGCAAGAAGAAATCAAACCTCATGATGTCT...ACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTTTTCTTTAGCATCTaGAATAGGACCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILVFFSI*NRTQLC
Trigger: GCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAAC...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTGTTTTCTTTAGCATCTaGAATAGGACCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVVFFSI*NRTQLC
Trigger: GCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAAC...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp ATGATCCCAGTGTTCCCAATCAGAATGCAAACAGACAGCTATAAACGAAGAAATCCATGGGCTGCTAGGTaGTTACGCTGGTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: MIPVFPIRMQTDSYKRRNPWAAR*LRWYSS
Trigger: CGAGGAATACCAGCGTAAGCACCTAGCAGCCCATGG...ATTTCTTCGTTTATAGCTGTCTGTTTGCATTCTGATTGGGAACACTGGGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569565.1
ENST00000573314.5
CDS-3UTR GCA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAACTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: RQPQEGLWVAILEVNILELAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAACATTCTGGGCATAACTaGGTTTGTTTTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKHSGHN*VCFWAA
Trigger: TGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATG...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCAGAGAAGTCCGTGTaGAAAGGTGTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLPEKSV*KGVMFW
Trigger: CCAGAACATCACACCTTTGCACACGGACTTCTCTGG...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp ATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTGGCAGGGGTGCTCTATaGTCATCAGTCATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: IDCTFFKHRGPSIVKICPGRGAL*SSVIQA
Trigger: AGCTTGAATGACTGATGAGCATAGAGCACCCCTGCC...AGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp AAAATGATCCCAGTGTTCCCAATCAGAATGCAAACAGACAGCTATAAACGAAGAGCTAGGTGCTTACGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: KMIPVFPIRMQTDSYKRRARCLR*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCGTAAGCACCTAGC...TCTTCGTTTATAGCTGTCTGTTTGCATTCTGATTGGGAACACTGGGATCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp CTTGCTGAACGATATTGCAAACACCAACTAATGCAGACTCCAAGCAGGTTTTGTAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: LAERYCKHQLMQTPSRFCSIVKP*AARCLR
Trigger: GCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCT...ACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR CCA 90 bp ATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: IDCTFFKHRGPSIVKICPSIVKP*AARCLR
Trigger: GCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCT...AGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTCAAGCTTGTAATTTGTaGCCATGTGCTCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVQACNL*PCAQTA
Trigger: TGCTGTTTGAGCACATGGCCACAAATTACAAGCTTG...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAGTCACCAGGACAACCTaGCAAGGAATTGCACCACCC +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEVTRTT*QGIAPP
Trigger: GGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGAC...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCATCACCTTCTTTGTTAAGTGCTATAGGTAAGACCAGATGTCTGGACAGAACTAAGGAATCGGTGCTCTaGAGCTCCTCCAAATTCGCC +
Preference number: 4 (lower is better)
Translates to: SSPSLLSAIGKTRCLDRTKESVL*SSSKFA
Trigger: GGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTT...AGTTCTGTCCAGACATCTGGTCTTACCTATAGCACTTAACAAAGAAGGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCCAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAATACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp ATTGAACAATCGCTACCATTCCTTCCACTTTTAGGCTACCATGGAGCAGGACACTACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: IEQSLPFLPLLGYHGAGHYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...GTGTCCTGCTCCATGGTAGCCTAAAAGTGGAAGGAATGGTAGCGATTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGATGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGGGGCTGCAGGGGGAATaGACTCTTATTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMGLQGE*TLIVIL
Trigger: GAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCC...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGAACTGCGTTTGTTTTTaGGCTGCAGGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKNCVCF*AAGGMD
Trigger: GTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTT...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTAEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAATCAGTCAAGAAAATGTaGGATCTGGAAGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSGHGKGYIHYHHCRHDESVKKM*DLEVSL
Trigger: AAGAGAGACTTCCAGATCCCACATTTTCTTGACTGA...TTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAATATTACTTAGTGGCTaGTATTCCTCGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLILLSG*YSSDPS
Trigger: TGAGGGGTCCGAGGAATACCAGCCACTAAGTAATAT...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569491.5
CDS-3UTR CCA 90 bp ATCCCAGTGTTCCCAATCAGAATGCAAACAGACAGCTATAAACGAAGAAATGCTAGAAATGCTGCTCTTTaGCTTTCCCGTCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: IPVFPIRMQTDSYKRRNARNAAL*LSRQPP
Trigger: CGGAGGCTGACGGGAAAGCCAAAGAGCAGCATTTCT...AGCATTTCTTCGTTTATAGCTGTCTGTTTGCATTCTGATTGGGAACACTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569565.1
CDS-3UTR TCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTCCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TTTCCTGAGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGCATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: FPEEGRGALCSSVIQASQHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...CTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAGTGTTCCCCAGAACTGGGGGACTTaGAATATCAGCTATATCAAT +
Preference number: 4 (lower is better)
Translates to: GYIHYHHCRHDENDPSVPQNWGT*NISYIN
Trigger: ATTGATATAGCTGATATTTCAAGTCCCCCAGTTCTG...GGGAACACTGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp AATAGACACAGGTCGGGTCATGGAAAGGGATACATCCATTACCACCACTGTCGGTGCAATCTGATTGGCTaGATTTTCATCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: NRHRSGHGKGYIHYHHCRCNLIG*IFIFIV
Trigger: GACAATGAAGATGAAAATTCAGCCAATCAGATTGCA...CCGACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTCATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CACCCCATTCTTGCTGAACGATATTGCAAACACCAACTAATGCAGACTCCAAGCCATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: HPILAERYCKHQLMQTPSHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...GCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp ACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAACAGAAGCTTGAACATTCAGGACCTAATTaGACAATCGCTACCATTCCT +
Preference number: 4 (lower is better)
Translates to: TQQAPDSLSCSFHEQKLEHSGPN*TIATIP
Trigger: AGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATG...TTCAAGCTTCTGTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAGTTTTCTTTAGCATCTaGAATAGGACCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLVFFSI*NRTQLC
Trigger: GCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAAC...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAGTTTTCTTTAGCATCTaGAATAGGACCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASVFFSI*NRTQLC
Trigger: GCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAAC...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGAAACGAGGGAAGAGGTaGAGCTTTCAGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGKRGKR*SFQEAR
Trigger: TCTGGCTTCCTGAAAGCTTCACCTCTTCCCTCGTTT...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGAAATGCCCTTACAGTTaGGATATAAACGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWKCPYS*DINEGR
Trigger: TCTTCCCTCGTTTATATCTCAACTGTAAGGGCATTT...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAAAGCTCCAGACAGTCTaGGTTGCTCATTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLKLQTV*VAHSMN
Trigger: GTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTAAGCTCCAGACAGTCTaGGTTGCTCATTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAKLQTV*VAHSMN
Trigger: GTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTT...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CCTGGCAAGGAATTGCACCACCCCATTCTTGCTGAACGATATTGCAAACACCAACTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: PGKELHHPILAERYCKHQLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...TTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR GCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMNLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASNLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: YQFSKHRLYILQAQGAINNLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...ATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR GCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEVTLYQ*QDSRLS
Trigger: TGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCAC...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTGTAGTGGAAACCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVVVETC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGGTTTCCACTAC...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAATTCCAAGGAATCGGTaGTCTGGAGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLIPRNR*SGAPPN
Trigger: ATTTGGAGGAGCTCCAGAGCACCGATTCCTTGGAAT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGCGTTTGTTTTTGGGCTaGAGGGGGAATGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKRLFLG*RGNGLL
Trigger: TAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACACATTCTGGGCATAACTaGGTTTGTTTTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTHSGHN*VCFWAA
Trigger: TGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATG...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTTCTCAGGCAGCAGTGTaGATTCCCTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASSQAAV*IPFPAC
Trigger: ACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGA...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGCCAGAGAAGTCCGTGTaGAAAGGTGTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMPEKSV*KGVMFW
Trigger: CCAGAACATCACACCTTTGCACACGGACTTCTCTGG...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAAAATTCTTTCAGTGCTaGTCCCAGAGAAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTKFFQC*SQRSPC
Trigger: ACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAGTTACCACCACATTTTGCCCAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGCAGGGGTGCTCTATaGTCATCAGTCATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: ELPPHFAQVLRKVLKLSGGRGAL*SSVIQA
Trigger: AGCTTGAATGACTGATGAGCATAGAGCACCCCTGCC...ACCACTAAGTTTCAGAACTTTCCTTAGAACTTGGGCAAAATGTGGTGGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TCAGCAGTTAGGTGGCCACACTTGAGAACAGCATGGAAAGGCGTATATGCCAAAGTTACCACCACATTTTaGCCAAGTTCTAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SAVRWPHLRTAWKGVYAKVTTTF*PSSKES
Trigger: ACTTTCCTTAGAACTTGGGCAAAATGTGGTGGTAAC...TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp GACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTTCAGTGCTCTGGAGCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: DCTFFKHRGPSIVKICPSVLWSC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGCTCCAGAGCAC...TGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569004.5
CDS-3UTR CCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCACACAGGTCGGGTCATaGAAAGGGATACATCCATTA +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTTQVGS*KGIHPL
Trigger: TAATGGATGTATCCCTTTCCATGACCCGACCTGTGT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
CDS-3UTR CCA 90 bp ATGGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAACACAGGTCGGGTCATaGAAAGGGATACATCCATTA +
Preference number: 4 (lower is better)
Translates to: MERDTSITTTVGMMKMIPTQVGS*KGIHPL
Trigger: TAATGGATGTATCCCTTTCCATGACCCGACCTGTGT...TGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAGCATCGTTAAACCATaGGCTGCTAGGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMSIVKP*AARCLR
Trigger: GCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCT...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCACAAGCTTGTAATTTGTaGCCATGTGCTCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASQACNL*PCAQTA
Trigger: TGCTGTTTGAGCACATGGCCACAAATTACAAGCTTG...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GGAAAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAGTCAAGCTTGTAATTTGTaGCCATGTGCTCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: GKGYIHYHHCRHDENDPSQACNL*PCAQTA
Trigger: TGCTGTTTGAGCACATGGCCACAAATTACAAGCTTG...ACTGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLTSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGATSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SISFPNIDCTFFKHRGPSTSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...TGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKTSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCCAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: AKSISFPNIDCTFFKHRGQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...CCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACATACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGTGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAAACTTTTAGGCTACCATaGAGCAGGACACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHETFRLP*SRTQKL
Trigger: CAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGT...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAACTTTTAGGCTACCATaGAGCAGGACACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASTFRLP*SRTQKL
Trigger: CAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGT...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGCCTCAGGAAGGTCTTTaGGTGGCTATTCTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGPQEGL*VAILEV
Trigger: CACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGGAAATGTGCCCATCATaGGAACAGCAGCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKEMCPS*EQQLSS
Trigger: GGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCCCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: PNIDCTFFKHRGPSIVKIPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...GATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGCATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: GALCSSVIQASQEMCPSWHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTCAGAACTGGGGGACTTaGAATATCAGCTATATCAAT +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFQNWGT*NISYIN
Trigger: ATTGATATAGCTGATATTTCAAGTCCCCCAGTTCTG...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAACAGAACTGGGGGACTTaGAATATCAGCTATATCAAT +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKQNWGT*NISYIN
Trigger: ATTGATATAGCTGATATTTCAAGTCCCCCAGTTCTG...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGCAATCTGATTGGCTaGATTTTCATCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVCNLIG*IFIFIV
Trigger: GACAATGAAGATGAAAATTCAGCCAATCAGATTGCA...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATTGCAATCTGATTGGCTaGATTTTCATCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHCNLIG*IFIFIV
Trigger: GACAATGAAGATGAAAATTCAGCCAATCAGATTGCA...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTRHHEV*FLLAVS
Trigger: GCTGACAGCAAGAAGAAATCAAACCTCATGATGTCT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAGTTTTCTTTAGCATCTaGAATAGGACCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTAVFFSI*NRTQLC
Trigger: GCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAAC...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAAGCTCCAGACAGTCTaGGTTGCTCATTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: YQFSKHRLYILQAQGAINKLQTV*VAHSMN
Trigger: GTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTT...ATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTACTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAAACCTGGCAAGGAATTaGACCACCCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYENLARN*TTPFLL
Trigger: CAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTT...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGGTAGTGGAAACCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQVVETC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGGTTTCCACTAC...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAGTAGTGGAAACCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASVVETC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGGTTTCCACTAC...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTATTCCAAGGAATCGGTaGTCTGGAGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASIPRNR*SGAPPN
Trigger: ATTTGGAGGAGCTCCAGAGCACCGATTCCTTGGAAT...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp ACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAACAGAAGCTTGAAAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: TQQAPDSLSCSFHEQKLEKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...TTCAAGCTTCTGTTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAAAATTCTTTCAGTGCTaGTCCCAGAGAAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLKFFQC*SQRSPC
Trigger: ACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAGCTTCTCAGGAAATGTaGCCATCATGGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEASQEM*PSWEQQ
Trigger: CTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAGGCAGGGGTGCTCTATaGTCATCAGTCATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEGRGAL*SSVIQA
Trigger: AGCTTGAATGACTGATGAGCATAGAGCACCCCTGCC...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCAGACAGTCTGAGTTaGTCATTCCATGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLPDSLS*SFHEQK
Trigger: CTTCTGTTCATGGAATGAGCAACTCAGACTGTCTGG...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTAHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGAACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACGTAAGACCAGATGTCTaGACAGAACTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: RTAWKGVYAKSISFPNIDVRPDV*TELGDL
Trigger: CAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTAC...GTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTATGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SQEVKAQPANHLHILLILCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTTGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAACTTTTAGGCTACCATaGAGCAGGACACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PANHLHILLILVESFKTATFRLP*SRTQKL
Trigger: CAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGT...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp CTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGCTCCAGACTTTTAGGCTACCATaGAGCAGGACACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LRKVLKLSGGVFVLSKLQTFRLP*SRTQKL
Trigger: CAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGT...CTGGAGCTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CATGATGAAAATGATCCCAGTGTTCCCAATCAGAATGCAAACAGACAGCTTAAACCACCCCATTCTTGCTaGACGATATTGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: HDENDPSVPNQNANRQLKPPHSC*TILQTP
Trigger: TGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGG...TTTAAGCTGTCTGTTTGCATTCTGATTGGGAACACTGGGATCATTTTCATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567940.1
CDS-3UTR TCA 90 bp CACCACTGTCGGCATGATGAAAATGATCCCAGTGTTCCCAATCAGAATGCAAACCATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: HHCRHDENDPSVPNQNANHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...GTTTGCATTCTGATTGGGAACACTGGGATCATTTTCATCATGCCGACAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTGCAATCTGATTGGCTaGATTTTCATCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFCNLIG*IFIFIV
Trigger: GACAATGAAGATGAAAATTCAGCCAATCAGATTGCA...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PQEGLWVAILEVNILERFILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTGTTTTCTTTAGCATCTaGAATAGGACCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAVFFSI*NRTQLC
Trigger: GCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAAC...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAGTTTTCTTTAGCATCTaGAATAGGACCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLVFFSI*NRTQLC
Trigger: GCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAAC...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCAAATGCCCTTACAGTTaGGATATAAACGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTKCPYS*DINEGR
Trigger: TCTTCCCTCGTTTATATCTCAACTGTAAGGGCATTT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGCTCCAGCTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: LRKVLKLSGGVFVLSKLQLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...CTGGAGCTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCGTAGTGGAAACCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTVVETC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGGTTTCCACTAC...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGTAGTGGAAACCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNVVETC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGGTTTCCACTAC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAATTCCAAGGAATCGGTaGTCTGGAGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEIPRNR*SGAPPN
Trigger: ATTTGGAGGAGCTCCAGAGCACCGATTCCTTGGAAT...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LILVESFKTASGASEAASMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGGGTTTGATTTCTTCTTaGTGTCAGCTTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKGLISS*CQLGSR
Trigger: TCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACC...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAATTCTTTCAGTGCTaGTCCCAGAGAAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMKFFQC*SQRSPC
Trigger: ACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTT...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTCCAGACAGTCTGAGTTaGTCATTCCATGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASPDSLS*SFHEQK
Trigger: CTTCTGTTCATGGAATGAGCAACTCAGACTGTCTGG...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGCCAGACAGTCTGAGTTaGTCATTCCATGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGPDSLS*SFHEQK
Trigger: CTTCTGTTCATGGAATGAGCAACTCAGACTGTCTGG...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TATGCCAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGATTCCAAGGAATCGGTaGTCTGGAGCTGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YAKSISFPNIDCTFFKHRIPRNR*SGAVAL
Trigger: GAGAGCAACAGCTCCAGAGCACCGATTCCTTGGAAT...CCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569004.5
CDS-3UTR CCA 90 bp TACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCCCTTCACCATTCAAGCTTGTAATTTGTaGCCATGTGCTCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: YILQAQGAINSKNLPFTIQACNL*PCAQTA
Trigger: TGCTGTTTGAGCACATGGCCACAAATTACAAGCTTG...AATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp TTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAACATCAGCAGTTAGGTaGCCACACTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FSKHRLYILQAQGAINSKTSAVR*PHLRTA
Trigger: TGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT...TTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAACAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGACTTTTAGGCTACCATaGAGCAGGACACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKTFRLP*SRTQKL
Trigger: CAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGT...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
3UTR CAA 72 bp AGGGGGCCATCAATAGTAAAAATCTGCCCTTCACCATaGTTTAAATCTATGAGACGTTCAAGGCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: RGPSIVKICPSP*FKSMRRSRHSK
Trigger: CTTGGAATGCCTTGAACGTCTCATAGATTTAAACAATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp GCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACTGTACATATTATAATCTCTCGTaGAGGGGACCATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: AWKGVYAKSISFPNIDCTYYNLS*RGPSTP
Trigger: GGGAGTTGATGGTCCCCTTCACGAGAGATTATAATA...TGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp CAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCCAGAACTGGGGGACTTaGAATATCAGCTATATCAAT +
Preference number: 4 (lower is better)
Translates to: QIYQFSKHRLYILQAQGAQNWGT*NISYIN
Trigger: ATTGATATAGCTGATATTTCAAGTCCCCCAGTTCTG...GGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCTGCAATCTGATTGGCTaGATTTTCATCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTCNLIG*IFIFIV
Trigger: GACAATGAAGATGAAAATTCAGCCAATCAGATTGCA...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASRHHEV*FLLAVS
Trigger: GCTGACAGCAAGAAGAAATCAAACCTCATGATGTCT...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTGTAGTGGAAACCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAVVETC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGGTTTCCACTAC...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAACATTCTGGGCATAACTaGGTTTGTTTTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEHSGHN*VCFWAA
Trigger: TGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATG...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAGTTACCACCACATTTTaGCCAAGTTCTAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: QEGLWVAILEVNILERFLVTTTF*PSSKES
Trigger: ACTTTCCTTAGAACTTGGGCAAAATGTGGTGGTAAC...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACTGACACAGGTCGGGTCATaGAAAGGGATACATCCATTA +
Preference number: 4 (lower is better)
Translates to: NSMERRICQIYQFSKHRLTQVGS*KGIHPL
Trigger: TAATGGATGTATCCCTTTCCATGACCCGACCTGTGT...CAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp TTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAATTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSKHRLYILQAQGAINSKFVDFE*LGNVAV
Trigger: CACTGCGACATTCCCTAGCCACTCAAAATCAACGAA...TTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTCACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: LHILLILVESFKTASGASHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp TATGCCAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGCAAAAGGTTCTGGCCTaGGGAAGACTTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: YAKSISFPNIDCTFFKHRQKVLA*GRLVHQ
Trigger: CTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTG...CCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCTGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTCLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTCATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGCAGAACTGGGGGACTTaGAATATCAGCTATATCAAT +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMQNWGT*NISYIN
Trigger: ATTGATATAGCTGATATTTCAAGTCCCCCAGTTCTG...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYERHHEV*FLLAVS
Trigger: GCTGACAGCAAGAAGAAATCAAACCTCATGATGTCT...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp TTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAGACATCATGAGGTTTaGTTTCTTCTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: FSKHRLYILQAQGAINSKRHHEV*FLLAVS
Trigger: GCTGACAGCAAGAAGAAATCAAACCTCATGATGTCT...TTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR TCA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGAAATGCCCTTACAGTTaGGATATAAACGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKKCPYS*DINEGR
Trigger: TCTTCCCTCGTTTATATCTCAACTGTAAGGGCATTT...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGGTAGTGGAAACCTGTTaGTCTCACTTCGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMVVETC*SHFVDF
Trigger: AAAATCAACGAAGTGAGAGCAACAGGTTTCCACTAC...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGAMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAAAGTTGGGTATTTTaGCTGCAATCTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMKSWVF*LQSDWL
Trigger: CAGCCAATCAGATTGCAGGCAAAATACCCAACTTTT...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AAAATGATCCCAGTGTTCCCAATCAGAATGCAAACAGACAGCTATAAACGAAGACAAGCTTGTAATTTGTaGCCATGTGCTCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: KMIPVFPIRMQTDSYKRRQACNL*PCAQTA
Trigger: TGCTGTTTGAGCACATGGCCACAAATTACAAGCTTG...TCTTCGTTTATAGCTGTCTGTTTGCATTCTGATTGGGAACACTGGGATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CCA 90 bp AAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCTGCACTTGAGAACAGCATaGAAAGGCGTATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: KHRLYILQAQGAINSKNLHLRTA*KGVYAK
Trigger: TTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTG...CAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CCA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTGCCTGCAATCTGATTaGCTGAATTTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: HLHILLILVESFKTASGACLQSD*LNFHLH
Trigger: ATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCA...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGTCAGTCAAGAAAATGTaGGATCTGGAAGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMSVKKM*DLEVSL
Trigger: AAGAGAGACTTCCAGATCCCACATTTTCTTGACTGA...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CCA 90 bp TATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATTCAGTCAAGAAAATGTaGGATCTGGAAGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: YQFSKHRLYILQAQGAINSVKKM*DLEVSL
Trigger: AAGAGAGACTTCCAGATCCCACATTTTCTTGACTGA...ATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR GCA 90 bp AGAACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACCTTGCTGAACGATATTaGAAACACCAACTAATGCAG +
Preference number: 4 (lower is better)
Translates to: RTAWKGVYAKSISFPNIDLAERY*KHQLMQ
Trigger: CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAG...GTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR GCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAGTTACCACCACATTTTaGCCAAGTTCTAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEVTTTF*PSSKES
Trigger: ACTTTCCTTAGAACTTGGGCAAAATGTGGTGGTAAC...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CCA 90 bp AAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCTACAACAAAAGGTTCTaGCCTGGGGAAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: KGVYAKSISFPNIDCTFFYNKRF*PGEDLY
Trigger: GTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTA...GAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp GCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACTGTACACATTGTTTAAATCTATaGGACGTTCAAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: AWKGVYAKSISFPNIDCTHCLNL*DVQGIP
Trigger: TGGAATGCCTTGAACGTCTCATAGATTTAAACAATG...TGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR TCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAATGCAATCTGATTGGCTaGATTTTCATCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYECNLIG*IFIFIV
Trigger: GACAATGAAGATGAAAATTCAGCCAATCAGATTGCA...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR TCA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAATTTTGCCTGCAATCTaGTTGGCTGAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEILPAI*LAEFSS
Trigger: AGATGAAAATTCAGCCAATCAGATTGCAGGCAAAAT...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR GCA 90 bp TATGCCAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGATGGAAAGGCGTATATaGCAAATCTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YAKSISFPNIDCTFFKHRMERRI*QIYQFS
Trigger: GGAAAACTGATAGATTTGGCATATACGCCTTTCCAT...CCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS CCA 90 bp GAAGGGAATCCGGCGCCTGCACTCCGCGCTGGGCGGGGCGGTCCTTaGAGAGCTTCAGGGTCGCCCGGGCAGGGTTCTGGCTCATCCCGG +
Preference number: 5 (lower is better)
Translates to: EGNPAPALRAGRGGP*RASGSPGQGSGSSR
Trigger: CCGGGATGAGCCAGAACCCTGCCCGGGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442903.3
ENST00000652388.1
CDS CCA 90 bp ATAAGGCCGCGCGACAGAAGGGAATCCGGCGCCTGCACTCCGCGCTaGGCGGGGCGGTCCTTGGAGAGCTTCAGGGTCGCCCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: IRPRDRRESGACTPR*AGRSLESFRVARAG
Trigger: CCCTGCCCGGGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCTTCTGTCGCGCGGCCTTAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442903.3
ENST00000652388.1
CDS CCA 90 bp CCCCGGAACTGGCGCCTCACAGACAGCGCGGGGCGGCCGCCACGGTaGCGGGAAGGCCAAGCGCTGGCCCTGGGTTGTTCTTCACCCATA +
Preference number: 5 (lower is better)
Translates to: PRNWRLTDSAGRPPR*REGQALALGCSSPI
Trigger: TATGGGTGAAGAACAACCCAGGGCCAGCGCTTGGCCTTCCCGCCACCGTGGCGGCCGCCCCGCGCTGTCTGTGAGGCGCCAGTTCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000561769.1
ENST00000562830.1
ENST00000567744.5
ENST00000567940.1
ENST00000568573.1
ENST00000569565.1
ENST00000573314.5
CDS GCA 90 bp ACAGCCGGAACTATAAGGCCGCGCGACAGAAGGGAATCCGGCGCCTaGACTCCGCGCTGGGCGGGGCGGTCCTTGGAGAGCTTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TAGTIRPRDRRESGA*TPRWAGRSLESFRV
Trigger: GACCCTGAAGCTCTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCTTCTGTCGCGCGGCCTTATAGTTCCGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431261.6
ENST00000442903.3
ENST00000652388.1
CDS-3UTR CAA 90 bp GAGCAGAGGGCGAAATCGTGCAGTTTACGCGGAGCTGGGGACCCCGAGCCTCAGAGCGCTGGCCCTGGGTaGTTCTTCACCCATAACCCC +
Preference number: 5 (lower is better)
Translates to: EQRAKSCSLRGAGDPEPQSAGPG*FFTHNP
Trigger: GGGGTTATGGGTGAAGAACAACCCAGGGCCAGCGCT...CTGAGGCTCGGGGTCCCCAGCTCCGCGTAAACTGCACGATTTCGCCCTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CAA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGGGCGGGGCGGTCCTaGGAGAGCTTCAGGGTCGCC +
Preference number: 5 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVWAGRS*ESFRVA
Trigger: GGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCCA...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442903.3
ENST00000652388.1
CDS-3UTR CAA 90 bp AACGAAGAAATGCTGCTCTTTGGCTTTCCCGTCAGCCTCCGGGAGTCCCTCCCCATCTGGAAGTCTCTCTaGGAAAGAGGGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: NEEMLLFGFPVSLRESLPIWKSL*ERGGRG
Trigger: CCCTCTGCCCCCTCTTTCCAAGAGAGACTTCCAGAT...GGGGAGGGACTCCCGGAGGCTGACGGGAAAGCCAAAGAGCAGCATTTCTTCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569565.1
CDS-3UTR CAA 90 bp AGAGGTGAAGCTTTCAGGAAGCCAGAGAGCCCCTGCCGGTCAGGTTTCCTGAGGCTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: RGEAFRKPESPCRSGFLRLLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...CCTCAGGAAACCTGACCGGCAGGGGCTCTCTGGCTTCCTGAAAGCTTCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TGGTATTCCTCGGACCCCTCAATAGACACAGGTCGGGTCATGGAAAGGGATACAAGCGCTGGCCCTGGGTaGTTCTTCACCCATAACCCC +
Preference number: 5 (lower is better)
Translates to: WYSSDPSIDTGRVMERDTSAGPG*FFTHNP
Trigger: GGGGTTATGGGTGAAGAACAACCCAGGGCCAGCGCT...TGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGGAATACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CAA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTATGCAGGCCGCTGGGTTaGATCCAGACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILCRPLG*IQTVTF
Trigger: GAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCA...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTACAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAACAGACAGCTGCTCTTaGGCTTTCCCGTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RQPQEGLWVAILEVNILETDSCS*AFPSAS
Trigger: GGAGGCTGACGGGAAAGCCAAAGAGCAGCTGTCTGT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567744.5
CDS CCA 90 bp GAATCGGTGCTCTGGAGCTGTTGCTCTCACTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTGACCCTCTACCAATGCCAAGACAGC +
Preference number: 5 (lower is better)
Translates to: ESVLWSCCSHFVDFE*LGNVAVTLYQCQDS
Trigger: GCTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTCAAAATCAACGAAGTGAGAGCAACAGCTCCAGAGCACCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569004.5
CDS-3UTR CAA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGTGCAGGCCGCTGGGTTaGATCCAGACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKCRPLG*IQTVTF
Trigger: GAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCA...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TTTCCTGAGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGTGCAGGCCGCTGGGTTaGATCCAGACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: FPEEGRGALCSSVIQASQCRPLG*IQTVTF
Trigger: GAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCA...CTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAATGGGCGGGGCGGTCCTaGGAGAGCTTCAGGGTCGCC +
Preference number: 5 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEWAGRS*ESFRVA
Trigger: GGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCCA...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652388.1
CDS-3UTR CAA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGTGCAGGCCGCTGGGTTaGATCCAGACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: GALCSSVIQASQEMCPSWCRPLG*IQTVTF
Trigger: GAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCA...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGCAGGCCGCTGGGTTaGATCCAGACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVCRPLG*IQTVTF
Trigger: GAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCA...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: RQPQEGLWVAILEVNILEASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCAGCGCTGGCCCTGGGTaGTTCTTCACCCATAACCCC +
Preference number: 5 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTSAGPG*FFTHNP
Trigger: GGGGTTATGGGTGAAGAACAACCCAGGGCCAGCGCT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS GCA 90 bp GTTGATTTTGAGTGGCTAGGGAATGTCGCAGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCACCAGGACAACCTGTAGGGTATTAT +
Preference number: 5 (lower is better)
Translates to: VDFEWLGNVAVTLYQ*QDSRLSPGQPVGYY
Trigger: ATAATACCCTACAGGTTGTCCTGGTGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTCAAAATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442903.3
CDS-3UTR CAA 90 bp TGTCACCAGGACAACCTGGCAAGGAATTGCACCACCCCATTCTTGCTGAACGATTGCACCACCCCATTCTaGCTGAACGATATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: CHQDNLARNCTTPFLLNDCTTPF*LNDIAN
Trigger: GTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCA...ATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR CAA 90 bp ACAAAAGGTTCTGGCCTGGGGAAGACTTGTACATCAGCAGTTAGGTGGCCACACTGCACCACCCCATTCTaGCTGAACGATATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: TKGSGLGKTCTSAVRWPHCTTPF*LNDIAN
Trigger: GTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCA...GTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CAA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGATGCACCACCCCATTCTaGCTGAACGATATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGCTTPF*LNDIAN
Trigger: GTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCA...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTCAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TCCCAGGAAGTTAAAGCCCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SQEVKAQPANHLHILLILVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...TAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGGGCTTTAACTTCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GALCSSVIQASQEMCPSWVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: ASGRSLGGYSRGEHTGKVVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...AACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAACTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: RQPQEGLWVAILEVNILELLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVLLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGCTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKLLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: QASQEMCPSWEQQLSSKLASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...AAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGATCTGGAAGTCTCTCTaGGAAAGAGGGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LCSSVIQASQEMCPSWEQIWKSL*ERGGRG
Trigger: CCCTCTGCCCCCTCTTTCCAAGAGAGACTTCCAGAT...CTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CAA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAAATCTGGAAGTCTCTCTaGGAAAGAGGGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHEIWKSL*ERGGRG
Trigger: CCCTCTGCCCCCTCTTTCCAAGAGAGACTTCCAGAT...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CAA 90 bp GGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGTGCACCACCCCATTCTaGCTGAACGATATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: GRQGCSMLISHSSFSGNVCTTPF*LNDIAN
Trigger: GTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCA...CACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CACCACTGTCGGCATGATGAAAATGATCCCAGTGTTCCCAATCAGAATGCAAACCAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: HHCRHDENDPSVPNQNANQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...GTTTGCATTCTGATTGGGAACACTGGGATCATTTTCATCATGCCGACAGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR CAA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCACAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: LILVESFKTASGASEAASQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAAGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHEVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: PQEGLWVAILEVNILERFVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: LILVESFKTASGASEAASVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGSRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTCTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: RKAGVLYAHQSFKLLRKCLLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...ACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: PQEGLWVAILEVNILERFASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAAGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHEASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAGTGTTATCTGGAAGTCTCTCTaGGAAAGAGGGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: KGYIHYHHCRHDENDPSVIWKSL*ERGGRG
Trigger: CCCTCTGCCCCCTCTTTCCAAGAGAGACTTCCAGAT...AACACTGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567940.1
ENST00000569565.1
ENST00000573314.5
CDS-3UTR CAA 90 bp GTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATTCAAGCTTGTAATTaGTGGCCATGTGCTCAAACA +
Preference number: 5 (lower is better)
Translates to: VLLRQPQEGLWVAILEVNIQACN*WPCAQT
Trigger: TGTTTGAGCACATGGCCACAAATTACAAGCTTGAAT...GTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CAA 90 bp GGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGTGCACCACCCCATTCTaGCTGAACGATATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: GALCSSVIQASQEMCPSWCTTPF*LNDIAN
Trigger: GTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCA...CCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCAACCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: PTSQPPSHPSHTSRVIQNVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...GTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CAGCAAGTGGTGCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAACCTCATCACCTTCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: QQVVLLRQPQEGLWVAILTSSPS*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGAAGGTGATGAGGT...TAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGCACCACTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: RQPQEGLWVAILEVNILESRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTACTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLLLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGAACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACAGCGCTGGCCCTGGGTaGTTCTTCACCCATAACCCC +
Preference number: 5 (lower is better)
Translates to: RTAWKGVYAKSISFPNIDSAGPG*FFTHNP
Trigger: GGGGTTATGGGTGAAGAACAACCCAGGGCCAGCGCT...GTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CAA 90 bp GAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAATTCAAGCTTGTAATTaGTGGCCATGTGCTCAAACA +
Preference number: 5 (lower is better)
Translates to: EAASGRSLGGYSRGEHTGIQACN*WPCAQT
Trigger: TGTTTGAGCACATGGCCACAAATTACAAGCTTGAAT...TCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313182.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CAA 90 bp TGTCACCAGGACAACCTGGCAAGGAATTGCACCACCCCATTCTTGCTGAACGATATTCAAGCTTGTAATTaGTGGCCATGTGCTCAAACA +
Preference number: 5 (lower is better)
Translates to: CHQDNLARNCTTPFLLNDIQACN*WPCAQT
Trigger: TGTTTGAGCACATGGCCACAAATTACAAGCTTGAAT...ATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567940.1
ENST00000573314.5
CDS-3UTR CAA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTGCACCACCCCATTCTaGCTGAACGATATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: PQEGLWVAILEVNILERFCTTPF*LNDIAN
Trigger: GTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCA...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAATGCACCACCCCATTCTaGCTGAACGATATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: ASQEMCPSWEQQLSSKLKCTTPF*LNDIAN
Trigger: GTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCA...TTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGCAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTCAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: HLHILLILVESFKTASGAQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...AGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SISFPNIDCTFFKHRGPSVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...TGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CAA 90 bp GCTTCTGAGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACCTCATCACCTTCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: ASEAASGRSLGGYSRGEHTSSPS*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGAAGGTGATGAGGT...ATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCTCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: LISHSSFSGNVPIMGTAASRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCAGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCACTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: PANHLHILLILVESFKTALLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...TGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GAATTGCACCACCCCATTCTTGCTGAACGATATTGCAAACACCAACTAATGCAGCTTCTTGCTGTCAGCTaGGGAGTAGAGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: ELHHPILAERYCKHQLMQLLAVS*GVEHSM
Trigger: CATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAG...CTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CAA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGTGCAGGCCGCTGGGTTaGATCCAGACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKCRPLG*IQTVTF
Trigger: GAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCA...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CATTCCATGAACAGAAGCTTGAAAATGCCCTTACAGTTGAGATATAAACGAGGGTGCAGGCCGCTGGGTTaGATCCAGACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: HSMNRSLKMPLQLRYKRGCRPLG*IQTVTF
Trigger: GAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCA...CCCTCGTTTATATCTCAACTGTAAGGGCATTTTCAAGCTTCTGTTCATGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCCAACCTGGCAAGGAATaGCACCACCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: PNIDCTFFKHRGPSIVKIQPGKE*HHPILA
Trigger: AGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTG...GATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CAA 90 bp TTTCCTGAGGAAGGCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: FPEEGRGALCSSVIQASQICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...CTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGCCTTCCTCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: RQPQEGLWVAILEVNILEICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...TTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCAGCCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: AASGRSLGGYSRGEHTGKTELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...CTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GCAGGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATACCTCATCACCTTCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: AGVLYAHQSFKLLRKCAHTSSPS*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGAAGGTGATGAGGT...ATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: PQEGLWVAILEVNILERFSRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: LHILLILVESFKTASGASASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGGCCTCAGGAAGGTCTTaGGGTGGCTATTCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMASGRS*GGYSRG
Trigger: ACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGGC...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACATTAGTGGTGGTGTGTTaGTACTCAGCAAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SMLISHSSFSGNVPIMGTLVVVC*YSASSR
Trigger: TCTGGAGCTTGCTGAGTACAAACACACCACCACTAA...TGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGCTCCAGTTAGTGGTGGTGTGTTaGTACTCAGCAAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LRKVLKLSGGVFVLSKLQLVVVC*YSASSR
Trigger: TCTGGAGCTTGCTGAGTACAAACACACCACCACTAA...CTGGAGCTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS TCA 90 bp CACCCATCAGCAGGATGGATAACAACTCCAGCTATGTTCCCCAGATaGGGCAACACTCTGAAATTTCAAAGAACATTTGAGACCCAGAAT +
Preference number: 5 (lower is better)
Translates to: HPSAGWITTPAMFPR*GNTLKFQRTFETQN
Trigger: ATTCTGGGTCTCAAATGTTCTTTGAAATTTCAGAGTGTTGCCTCATCTGGGGAACATAGCTGGAGTTGTTATCCATCCTGCTGATGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564306.5
CDS-3UTR CAA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATTCAAGCTTGTAATTaGTGGCCATGTGCTCAAACA +
Preference number: 5 (lower is better)
Translates to: LISHSSFSGNVPIMGTAAIQACN*WPCAQT
Trigger: TGTTTGAGCACATGGCCACAAATTACAAGCTTGAAT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000567744.5
ENST00000573314.5
CDS-3UTR CAA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAGTTAGGTGGCCACACTaGAGAACAGCATGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYEVRWPH*RTAWKG
Trigger: GCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAAC...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GGGGTGCTCTATGCTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: GVLYAHQSFKLLRKCAHHTELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...ATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAGCATAGAGCACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTCATCAGTCATTCAAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: LISHSSFSGNVPIMGTAATELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...AGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTTGAATGACTGATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTSRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AAGGGATACATCCATTACCACCACTGTCGGCATGATGAAAATGATCCCAGTGTTAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: KGYIHYHHCRHDENDPSVSRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...AACACTGGGATCATTTTCATCATGCCGACAGTGGTGGTAATGGATGTATCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CAA 90 bp AAGCTTCTCAGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: KLLRKCAHHGNSSYLPSLICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...TAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCTGAGAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313182.6
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTGAGGCAGCCTCAACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: LILVESFKTASGASEAASTELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...TGAGGCTGCCTCAGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAAACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHETELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TGGTGTGTTTGTACTCAGCAAGCTCCAGACAGTCTGAGTTGCTCATTCCATGAAACCTCATCACCTTCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: WCVCTQQAPDSLSCSFHETSSPS*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGAAGGTGATGAGGT...TTCATGGAATGAGCAACTCAGACTGTCTGGAGCTTGCTGAGTACAAACACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCTCAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTACCTCATCACCTTCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: PQEGLWVAILEVNILERFTSSPS*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGAAGGTGATGAGGT...AAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATTTAGTGGTGGTGTGTTaGTACTCAGCAAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: YQFSKHRLYILQAQGAINLVVVC*YSASSR
Trigger: TCTGGAGCTTGCTGAGTACAAACACACCACCACTAA...ATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573314.5
CDS-3UTR CAA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGCCCACCTCATCACCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKPTSSP*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGGTGATGAGGTGGG...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569491.5
CDS-3UTR CAA 90 bp GGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTACCACCTCATCACCTTCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: GRSLGGYSRGEHTGKVFTTSSPS*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGAAGGTGATGAGGT...GGTAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGTGGTGCTTCTAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: LHILLILVESFKTASGASSRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...AGAAGCACCACTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CAAGTTCTAAGGAAAGTTCTGAAACTTAGTGGTGGTGTGTTTGTACTCAGCAAGAGCAGGACACAAAAGTaGGGTATTTTGCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: QVLRKVLKLSGGVFVLSKSRTQK*GILPAI
Trigger: GATTGCAGGCAAAATACCCAACTTTTGTGTCCTGCT...CTTGCTGAGTACAAACACACCACCACTAAGTTTCAGAACTTTCCTTAGAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313182.6
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGCCAACCACCTTCACATCCTTCTCATACTAGTAGAGTCATTCAAAACAGCAAGATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: SQPPSHPSHTSRVIQNSKICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...CTTGCTGTTTTGAATGACTCTACTAGTATGAGAAGGATGTGAAGGTGGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CAGGAAGGTCTTTGGGTGGCTATTCTAGAGGTGAACATACTGGAAAGGTTTTTAACCTCATCACCTTCTTaGTTAAGTGCTATAGGTAAG +
Preference number: 5 (lower is better)
Translates to: QEGLWVAILEVNILERFLTSSPS*LSAIGK
Trigger: CTTACCTATAGCACTTAACAAAGAAGGTGATGAGGT...TAAAAACCTTTCCAGTATGTTCACCTCTAGAATAGCCACCCAAAGACCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000442903.3
ENST00000567744.5
ENST00000573314.5
ENST00000652388.1
CDS CCA 90 bp AAGACTTGTACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAATCTATCAGTTTTCTAGAATATGAT +
Preference number: 5 (lower is better)
Translates to: KTCTSAVRWPHLRTA*KGVYAKSISFLEYD
Trigger: ATCATATTCTAGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563729.1
CDS-3UTR CAA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp AGGAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: RKCAHHGNSSYLPSLKIMTELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...CATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp CCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAAATCACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: PNIDCTFFKHRGPSIVKITELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...GATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CAA 90 bp TTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGGGGCCATCAATAGTAAAATTCAAGCTTGTAATTaGTGGCCATGTGCTCAAACA +
Preference number: 5 (lower is better)
Translates to: FSKHRLYILQAQGAINSKIQACN*WPCAQT
Trigger: TGTTTGAGCACATGGCCACAAATTACAAGCTTGAAT...TTTACTATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CAA 90 bp AACAGCATGGAAAGGCGTATATGCCAAATCTATCAGTTTTCCAAACATAGACTGACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: NSMERRICQIYQFSKHRLTELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...CAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS-3UTR CAA 90 bp GAAATGTGCCCATCATGGGAACAGCAGCTATCTTCCAAGCTTAAAAATTATGAAACAGAACTGGGGGACTaGAAATATCAGCTATATCAA +
Preference number: 5 (lower is better)
Translates to: EMCPSWEQQLSSKLKNYETELGD*KYQLYQ
Trigger: TTGATATAGCTGATATTTCAAGTCCCCCAGTTCTGT...TTCATAATTTTTAAGCTTGGAAGATAGCTGCTGTTCCCATGATGGGCACATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313182.6
ENST00000420799.7
ENST00000431261.6
ENST00000567744.5
ENST00000569491.5
ENST00000573314.5
ENST00000652388.1
CDS-3UTR CAA 90 bp TATGCCAAATCTATCAGTTTTCCAAACATAGACTGTACATTCTTCAAGCACAGGATCTGCCCTTCACCATaGTTTAAATCTATGAGACGT +
Preference number: 5 (lower is better)
Translates to: YAKSISFPNIDCTFFKHRICPSP*FKSMRR
Trigger: ACGTCTCATAGATTTAAACAATGGTGAAGGGCAGAT...CCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569004.5
ENST00000573314.5
CDS CCA 72 bp CCGGCGCCTGCACTCCGCGCTGGGCGGGGCGGTCCTTaGAGAGCTTCAGGGTCGCCCGGGCAGGGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: PAPALRAGRGGP*RASGSPGQGSG
Trigger: GCCAGAACCCTGCCCGGGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGCGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442903.3
ENST00000652388.1
CDS CCA 72 bp TGGCGCCTCACAGACAGCGCGGGGCGGCCGCCACGGTaGCGGGAAGGCCAAGCGCTGGCCCTGGGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: WRLTDSAGRPPR*REGQALALGCS
Trigger: AGAACAACCCAGGGCCAGCGCTTGGCCTTCCCGCCACCGTGGCGGCCGCCCCGCGCTGTCTGTGAGGCGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000561769.1
ENST00000562830.1
ENST00000567744.5
ENST00000567940.1
ENST00000568573.1
ENST00000569565.1
ENST00000573314.5
CDS CCA 72 bp CGCGACAGAAGGGAATCCGGCGCCTGCACTCCGCGCTaGGCGGGGCGGTCCTTGGAGAGCTTCAGGGTCGCC +
Preference number: 6 (lower is better)
Translates to: RDRRESGACTPR*AGRSLESFRVA
Trigger: GGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCTTCTGTCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442903.3
ENST00000652388.1
CDS CAA 90 bp AGAAGGGAATCCGGCGCCTGCACTCCGCGCTGGGCGGGGCGGTCCTaGGAGAGCTTCAGGGTCGCCCGGGCAGGGTTCTGGCTCATCCCG +
Preference number: 6 (lower is better)
Translates to: RRESGACTPRWAGRS*ESFRVARAGFWLIP
Trigger: CGGGATGAGCCAGAACCCTGCCCGGGCGACCCTGAAGCTCTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442903.3
ENST00000652388.1
CDS GCA 72 bp ACTATAAGGCCGCGCGACAGAAGGGAATCCGGCGCCTaGACTCCGCGCTGGGCGGGGCGGTCCTTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: TIRPRDRRESGA*TPRWAGRSLES
Trigger: GCTCTCCAAGGACCGCCCCGCCCAGCGCGGAGTGCAGGCGCCGGATTCCCTTCTGTCGCGCGGCCTTATAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431261.6
ENST00000442903.3
ENST00000652388.1
CDS CAA 72 bp GCCACGGTGGCGGGAAGGCCAAGCGCTGGCCCTGGGTaGTTCTTCACCCATAACCCCTTCACCTGTAACCCC +
Preference number: 6 (lower is better)
Translates to: ATVAGRPSAGPG*FFTHNPFTCNP
Trigger: GGGGTTACAGGTGAAGGGGTTATGGGTGAAGAACAACCCAGGGCCAGCGCTTGGCCTTCCCGCCACCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000561769.1
ENST00000562830.1
ENST00000567744.5
ENST00000567940.1
ENST00000568573.1
ENST00000569565.1
ENST00000573314.5
CDS GCA 72 bp GAGTGGCTAGGGAATGTCGCAGTGACCCTCTACCAATaGCAAGACAGCCGTCTGTCACCAGGACAACCTGTA +
Preference number: 6 (lower is better)
Translates to: EWLGNVAVTLYQ*QDSRLSPGQPV
Trigger: TACAGGTTGTCCTGGTGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442903.3
CDS CCA 72 bp CTCTGGAGCTGTTGCTCTCACTTCGTTGATTTTGAGTaGCTAGGGAATGTCGCAGTGACCCTCTACCAATGC +
Preference number: 6 (lower is better)
Translates to: LWSCCSHFVDFE*LGNVAVTLYQC
Trigger: GCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTCAAAATCAACGAAGTGAGAGCAACAGCTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569004.5
CDS TCA 72 bp GCAGGATGGATAACAACTCCAGCTATGTTCCCCAGATaGGGCAACACTCTGAAATTTCAAAGAACATTTGAG +
Preference number: 6 (lower is better)
Translates to: AGWITTPAMFPR*GNTLKFQRTFE
Trigger: CTCAAATGTTCTTTGAAATTTCAGAGTGTTGCCTCATCTGGGGAACATAGCTGGAGTTGTTATCCATCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564306.5
CDS TCA 72 bp CTGAAGATCATGAATTGCCAGATGGAAAGGGTCCACTaGGTGCCTAGCAAAATCAATGAAGAGACCAACATT +
Preference number: 6 (lower is better)
Translates to: LKIMNCQMERVH*VPSKINEETNI
Trigger: AATGTTGGTCTCTTCATTGATTTTGCTAGGCACTCAGTGGACCCTTTCCATCTGGCAATTCATGATCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569180.1
CDS CCA 72 bp ACATCAGCAGTTAGGTGGCCACACTTGAGAACAGCATaGAAAGGCGTATATGCCAAATCTATCAGTTTTCTA +
Preference number: 6 (lower is better)
Translates to: TSAVRWPHLRTA*KGVYAKSISFL
Trigger: TAGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563729.1
CDS GCA 72 bp AAAATACCAGCCTCAGCTGAAACCAATGGAGTTCAATaGTACAGTATATACAATATAGCACTAGTGGTATAT +
Preference number: 6 (lower is better)
Translates to: KIPASAETNGVQ*YSIYNIALVVY
Trigger: ATATACCACTAGTGCTATATTGTATATACTGTAGCATTGAACTCCATTGGTTTCAGCTGAGGCTGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564306.5