RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INSYN2B (Homo sapiens)

Ensembl gene IDs: ENSG00000204767

Ensembl transcript IDs: ENST00000377365.4, ENST00000523970.1

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAAGGTGAAACCATCGGAGTGGTTTGCTCAATTAGGCTCAATTTaGAGTGGGGTAGGTACATCCCACGAACACACAGGATTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: GKVKPSEWFAQLGSI*SGVGTSHEHTGFCA
Trigger: AGCACAGAATCCTGTGTGTTCGTGGGATGTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGATGGTTTCACCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR GCA 90 bp CACTGCATCACTATGACAGGGGAAGGTGAAACCATCGGAGTGGTTTaGTCAATTAGGCTCAATTTGCAGTGGGGTAGGTACATCCCACGA +
Preference number: 1 (lower is better)
Translates to: HCITMTGEGETIGVV*SIRLNLQWGRYIPR
Trigger: TCGTGGGATGTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGATGGTTTCACCTTCCCCTGTCATAGTGATGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 90 bp TTTTGCTCGTGGTGGGAATCTGGTCTTAAAACTCAGCATGAGTTCTaGCTGAGTGTGACAGGGAACTTGGCAAGCGGTCACTCTAGTGTC +
Preference number: 1 (lower is better)
Translates to: FCSWWESGLKTQHEF*LSVTGNLASGHSSV
Trigger: GACACTAGAGTGACCGCTTGCCAAGTTCCCTGTCACACTCAGCCAGAACTCATGCTGAGTTTTAAGACCAGATTCCCACCACGAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 90 bp GGTGAAACCATCGGAGTGGTTTGCTCAATTAGGCTCAATTTGCAGTaGGGTAGGTACATCCCACGAACACACAGGATTCTGTGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: GETIGVVCSIRLNLQ*GRYIPRTHRILCSA
Trigger: TGCAGAGCACAGAATCCTGTGTGTTCGTGGGATGTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGATGGTTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR GCA 90 bp ACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATGCGGTGTTGTaGTTTGGTGTAGAATCAGTACAGCCTTGTTTGGCTGTATTTCTA +
Preference number: 1 (lower is better)
Translates to: TPSQFQVSGPSNAVL*FGVESVQPCLAVFL
Trigger: TAGAAATACAGCCAAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 90 bp TTGTCTGGTCACCAGGAAGGGAGACTGTGTCGATTAATATATGTTTaGACCTATCTACACGGCTGTTTCTGGGATGAAGGGATGAGAAAC +
Preference number: 1 (lower is better)
Translates to: LSGHQEGRLCRLIYV*TYLHGCFWDEGMRN
Trigger: GTTTCTCATCCCTTCATCCCAGAAACAGCCGTGTAGATAGGTTCAAACATATATTAATCGACACAGTCTCCCTTCCTGGTGACCAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 90 bp TTCCCTTTCATTCTCACTGAAATAGCTTTGTTCACTGCATCACTATaGCAGGGGAAGGTGAAACCATCGGAGTGGTTTGCTCAATTAGGC +
Preference number: 1 (lower is better)
Translates to: FPFILTEIALFTASL*QGKVKPSEWFAQLG
Trigger: GCCTAATTGAGCAAACCACTCCGATGGTTTCACCTTCCCCTGTCATAGTGATGCAGTGAACAAAGCTATTTCAGTGAGAATGAAAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 90 bp AATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTaGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACA +
Preference number: 1 (lower is better)
Translates to: NINFSEENSFPVSGQ*PKQCGVVLWCRIST
Trigger: TGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 90 bp TCTAACCACATGCTGATAGAGATTTTAATTCAACCAGAAGGAATCTaGGCCTTTCCATCCTACCCCTCATCCACAAGAGTATATAGCAAT +
Preference number: 1 (lower is better)
Translates to: SNHMLIEILIQPEGI*AFPSYPSSTRVYSN
Trigger: ATTGCTATATACTCTTGTGGATGAGGGGTAGGATGGAAAGGCTCAGATTCCTTCTGGTTGAATTAAAATCTCTATCAGCATGTGGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 90 bp TATATGTTTGAACCTATCTACACGGCTGTTTCTGGGATGAAGGGATaGGAAACAGTGTTGTGTTTTATCTTAGCCTTATCTATGTTACTC +
Preference number: 1 (lower is better)
Translates to: YMFEPIYTAVSGMKG*ETVLCFILALSMLL
Trigger: GAGTAACATAGATAAGGCTAAGATAAAACACAACACTGTTTCTCATCCCTTCATCCCAGAAACAGCCGTGTAGATAGGTTCAAACATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR GCA 90 bp GAGCTGGTATTAAGTTCCAAGGATAGTGAGTATGCATTTATGCATTaGTTTTTAAACTACAGAGAAAGCAGCTACATAAACTCCTGCAAT +
Preference number: 1 (lower is better)
Translates to: ELVLSSKDSEYAFMH*FLNYRESSYINSCN
Trigger: ATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAGTTTAAAAAGCAATGCATAAATGCATACTCACTATCCTTGGAACTTAATACCAGCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 90 bp CCAGTTTTATTTAATTCAGTTAAGGGTTCATGTGAGGGCCTCAACTaGAAACATATCTATGACCACATCAGCTTATTAATTTTGTGTGAG +
Preference number: 1 (lower is better)
Translates to: PVLFNSVKGSCEGLN*KHIYDHISLLILCE
Trigger: CTCACACAAAATTAATAAGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAACTGAATTAAATAAAACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 90 bp TTACTTAATTATATTACTTTAGTAGTTTGTTCAGCCATGCAAGTTTaGCTGGATCCACATGTATGTAGGTCTTGTCAACAGAATGAGCCA +
Preference number: 1 (lower is better)
Translates to: LLNYITLVVCSAMQV*LDPHVCRSCQQNEP
Trigger: TGGCTCATTCTGTTGACAAGACCTACATACATGTGGATCCAGTCAAACTTGCATGGCTGAACAAACTACTAAAGTAATATAATTAAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 90 bp GGTCTTAAAACTCAGCATGAGTTCTGGCTGAGTGTGACAGGGAACTaGGCAAGCGGTCACTCTAGTGTCCGTGAAGCCCTCAGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: GLKTQHEFWLSVTGN*ASGHSSVREALSKQ
Trigger: CTGCTTGCTGAGGGCTTCACGGACACTAGAGTGACCGCTTGCCAAGTTCCCTGTCACACTCAGCCAGAACTCATGCTGAGTTTTAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTACCCTGGGGTGGCCTaGCTCTGCCACAGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: WPKQCGVVLWCRISTALFYPGVA*LCHRQK
Trigger: TTTCTGCCTGTGGCAGAGTCAGGCCACCCCAGGGTA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTTGGAAGGTGTAGTGTaGGGTTTTGCTCGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VHTKNRFHPFARWSQALGLEGVV*GFARGG
Trigger: CCCACCACGAGCAAAACCCCACACTACACCTTCCAA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 90 bp GGGGAAGGTGAAACCATCGGAGTGGTTTGCTCAATTAGGCTCAATTaGCAGTGGGGTAGGTACATCCCACGAACACACAGGATTCTGTGC +
Preference number: 2 (lower is better)
Translates to: GEGETIGVVCSIRLN*QWGRYIPRTHRILC
Trigger: GCACAGAATCCTGTGTGTTCGTGGGATGTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGATGGTTTCACCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTCAACCAGAAGGAATCTaGGCCTTTCCATCCTACCCC +
Preference number: 2 (lower is better)
Translates to: WPKQCGVVLWCRISTALFQPEGI*AFPSYP
Trigger: GGGGTAGGATGGAAAGGCTCAGATTCCTTCTGGTTG...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCACTCAGCATGAGTTCTaGCTGAGTGTGACAGGGAAC +
Preference number: 2 (lower is better)
Translates to: ELHLSSTATPTSLYPGVATQHEF*LSVTGN
Trigger: GTTCCCTGTCACACTCAGCCAGAACTCATGCTGAGT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAGTTTATACCCTGGGGTaGCCTGACTCTGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEVYTLG*PDSATG
Trigger: GCCTGTGGCAGAGTCAGGCCACCCCAGGGTATAAAC...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCACCCATTTGCCAGGTaGTCTCAGGCCCTAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LRVHVRASTGNISMTTSAHPFAR*SQALGR
Trigger: TCTGCCTAGGGCCTGAGACCACCTGGCAAATGGGTG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCGCATGCACCATGAGATaGCAGAGCCTTAATTTGGGA +
Preference number: 2 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAACTMR*QSLNLG
Trigger: TCCCAAATTAAGGCTCTGTCATCTCATGGTGCATGC...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAGGCAGAGAAGAAGCATaGTGGTTTAGGGTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEGREEA*WFRVGP
Trigger: AGGGCCCACCCTAAACCATCATGCTTCTTCTCTGCC...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCAAGCATTTTATGCCCTaGCCACTTCTCTTGTGCTTA +
Preference number: 2 (lower is better)
Translates to: VHTKNRFHPFARWSQALGKHFMP*PLLLCL
Trigger: TAAGCACAAGAGAAGTGGGCAGGGCATAAAATGCTT...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCAGATTCCACCCATTTaGCAGGTGGTCTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: LRVHVRASTGNISMTTSAQIPPI*QVVSGP
Trigger: AGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 90 bp GGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTTaGAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACC +
Preference number: 2 (lower is better)
Translates to: GLGWALEQLQLLKSS*NYTYPAQPHQQVYT
Trigger: GGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTCAAAGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 90 bp AGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATGCGGTGTaGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTGGCTGTATTT +
Preference number: 2 (lower is better)
Translates to: RTPSQFQVSGPSNAV*CFGVESVQPCLAVF
Trigger: AAATACAGCCAAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCAAGGTGCATGCACCATaGGATGACAGAGCCTTAATT +
Preference number: 2 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAKVHAP*DDRALI
Trigger: AATTAAGGCTCTGTCATCTCATGGTGCATGCACCTT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTTGCATAAGCATTTTATaGCCTGCCCACTTCTCTTGT +
Preference number: 2 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSCISIL*PAHFSC
Trigger: ACAAGAGAAGTGGGCAGGGCATAAAATGCTTATGCA...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACACGGCTGTTTCTGGGATaGAGGGATGAGAAACAGTGT +
Preference number: 2 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITRLFLG*RDEKQC
Trigger: ACACTGTTTCTCATCCCTTCATCCCAGAAACAGCCG...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTTATGACAGGGGAAGGTaGAACCATCGGAGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: LRVHVRASTGNISMTTSAYDRGR*NHRSGL
Trigger: CAAACCACTCCGATGGTTTCACCTTCCCCTGTCATA...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAAGGGCAGGCCTTAAGTaGAGTGGATTTCCCATCTCA +
Preference number: 2 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITRAGLK*SGFPIS
Trigger: TGAGATGGGAAATCCACTGCACTTAAGGCCTGCCCT...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCCACAGGCAGAAAGGTaGATGCACCATGAGATGACA +
Preference number: 2 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSPQAER*MHHEMT
Trigger: TGTCATCTCATGGTGCATGCACCTTTCTGCCTGTGG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATGGGAAGGAAGTGCTTaGCATCTTGGAGGTGTTGGA +
Preference number: 2 (lower is better)
Translates to: INFSEENSFPVSGQWPKQWEGSA*HLGGVG
Trigger: TCCAACACCTCCAAGATGCCAAGCACTTCCTTCCCA...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTAGGCTCAATTTGCAGTaGGGTAGGTACATCCCACGA +
Preference number: 2 (lower is better)
Translates to: LRVHVRASTGNISMTTSARLNLQ*GRYIPR
Trigger: TCGTGGGATGTACCTACCCCACTGCAAATTGAGCCT...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTGTTCTTTTCCATTGCTaGGGCCAACTGACAGTTGAT +
Preference number: 2 (lower is better)
Translates to: WPKQCGVVLWCRISTALFVLFHC*GQLTVD
Trigger: ATCAACTGTCAGTTGGCCCCAGCAATGGAAAAGAAC...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCCCAACACACCAGGGTaGTCTTGCATAAGCATTTTA +
Preference number: 2 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSPNTPG*SCISIL
Trigger: TAAAATGCTTATGCAAGATCACCCTGGTGTGTTGGG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAAGTTTTTCAATCAGGTaGCCATTGTCTGGTCACCAG +
Preference number: 2 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMESFSIR*PLSGHQ
Trigger: CTGGTGACCAGACAATGGTCACCTGATTGAAAAACT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACATTTCTTTTGGGTTTATaGACCCAGGATGGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITFLLGL*TQDGKE
Trigger: TTCCTTCCCATCCTGGGTTCATAAACCCAAAAGAAA...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCAGGATTCTGTGCTCTaGAAAGATTCTAGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: LRVHVRASTGNISMTTSAQDSVL*KDSSLD
Trigger: GTCTAAGCTAGAATCTTTGCAGAGCACAGAATCCTG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTCAGCTCACATAATGTaGAACGTGCTAAGAGTTTAT +
Preference number: 2 (lower is better)
Translates to: WPKQCGVVLWCRISTALFSAHIM*NVLRVY
Trigger: ATAAACTCTTAGCACGTTCCACATTATGTGAGCTGA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTGTAGTGTGGGGTTTTaGTCGTGGTGGGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSCSVGF*SWWESG
Trigger: ACCAGATTCCCACCACGAGCAAAACCCCACACTACA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTAGGATGGGAAGGAAGTaGTTGGCATCTTGGAGGTGT +
Preference number: 2 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSRMGRK*LASWRC
Trigger: ACACCTCCAAGATGCCAAGCACTTCCTTCCCATCCT...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATAGCTTTGTTCACTaGATCACTATGACAGGGGAA +
Preference number: 2 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSNSFVH*ITMTGE
Trigger: TTCCCCTGTCATAGTGATGCAGTGAACAAAGCTATT...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTAACAAGTTTATACCCTaGGGTGGCCTGACTCTGCCA +
Preference number: 2 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSNKFIP*GGLTLP
Trigger: TGGCAGAGTCAGGCCACCCCAGGGTATAAACTTGTT...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAACGATTAATATATGTTTaGACCTATCTACACGGCTGT +
Preference number: 2 (lower is better)
Translates to: INFSEENSFPVSGQWPKQRLIYV*TYLHGC
Trigger: ACAGCCGTGTAGATAGGTTCAAACATATATTAATCG...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTTCACTGCATCACTATaGCAGGGGAAGGTGAAACCA +
Preference number: 2 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSFTASL*QGKVKP
Trigger: TGGTTTCACCTTCCCCTGTCATAGTGATGCAGTGAA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR GCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTGCCCACTTCTCTTGTaGTTATTATGTATGCTGATA +
Preference number: 2 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSCPLLL*LLCMLI
Trigger: TATCAGCATACATAATAAGCACAAGAGAAGTGGGCA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 90 bp GGCCTCAACTGGAAACATATCTATGACCACATCAGCTTATTAATTTaGTGTGAGGTACCTCAAACATCTCTTTATCTTCCCAGGCTAACT +
Preference number: 2 (lower is better)
Translates to: GLNWKHIYDHISLLI*CEVPQTSLYLPRLT
Trigger: AGTTAGCCTGGGAAGATAAAGAGATGTTTGAGGTACCTCACACAAAATTAATAAGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTGGGTTTTGCTCGTGGTaGGAATCTGGTCTTAAAACT +
Preference number: 2 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSGFCSW*ESGLKT
Trigger: AGTTTTAAGACCAGATTCCCACCACGAGCAAAACCC...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTTTATGAACCCAGGATaGGAAGGAAGTGCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSFMNPG*EGSAWH
Trigger: ATGCCAAGCACTTCCTTCCCATCCTGGGTTCATAAA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATGTGAAACCATCGGAGTaGTTTGCTCAATTAGGCTCA +
Preference number: 2 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYVKPSE*FAQLGS
Trigger: TGAGCCTAATTGAGCAAACCACTCCGATGGTTTCAC...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 90 bp TGGATCCACATGTATGTAGGTCTTGTCAACAGAATGAGCCAGACCTaGAATAACTCAGACTTTGGGATGGAAAGATATTTAAACCTCAAA +
Preference number: 2 (lower is better)
Translates to: WIHMYVGLVNRMSQT*NNSDFGMERYLNLK
Trigger: TTTGAGGTTTAAATATCTTTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACCTACATACATGTGGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 72 bp CCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTaGCCTGACTCTGCCACAGGCAGAAAGGTGCATGCA +
Preference number: 3 (lower is better)
Translates to: PAQPHQQVYTLG*PDSATGRKVHA
Trigger: TGCATGCACCTTTCTGCCTGTGGCAGAGTCAGGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 72 bp ACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCTaGCTCTGCCACAGGCAGAAAGGTGCATGCACCATG +
Preference number: 3 (lower is better)
Translates to: TATPTSLYPGVA*LCHRQKGACTM
Trigger: CATGGTGCATGCACCTTTCTGCCTGTGGCAGAGTCAGGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 72 bp CTTATCCAGCACAGCCACACCAACAAGTTTATACCCTaGGGTGGCCTGACTCTGCCACAGGCAGAAAGGTGC +
Preference number: 3 (lower is better)
Translates to: LIQHSHTNKFIP*GGLTLPQAERC
Trigger: GCACCTTTCTGCCTGTGGCAGAGTCAGGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 72 bp CCTGACTCTGCCACAGGCAGAAAGGTGCATGCACCATaGGATGACAGAGCCTTAATTTGGGATCAAGGGGCT +
Preference number: 3 (lower is better)
Translates to: PDSATGRKVHAP*DDRALIWDQGA
Trigger: AGCCCCTTGATCCCAAATTAAGGCTCTGTCATCTCATGGTGCATGCACCTTTCTGCCTGTGGCAGAGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CAA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTGGCATCTTGGAGGTGTaGGAAGGTGTAGTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: WPKQCGVVLWCRISTALFGILEV*EGVVWG
Trigger: ACCCCACACTACACCTTCCAACACCTCCAAGATGCC...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CAA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCATGGGAAGGAAGTGCTaGGCATCTTGGAGGTGTTGG +
Preference number: 3 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAMGRKC*ASWRCW
Trigger: CCAACACCTCCAAGATGCCAAGCACTTCCTTCCCAT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 72 bp TGGTGGGAATCTGGTCTTAAAACTCAGCATGAGTTCTaGCTGAGTGTGACAGGGAACTTGGCAAGCGGTCAC +
Preference number: 3 (lower is better)
Translates to: WWESGLKTQHEF*LSVTGNLASGH
Trigger: GTGACCGCTTGCCAAGTTCCCTGTCACACTCAGCCAGAACTCATGCTGAGTTTTAAGACCAGATTCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCAGTGTGACAGGGAACTaGGCAAGCGGTCACTCTAGT +
Preference number: 3 (lower is better)
Translates to: LKVHTKNRFHPFARWSQASVTGN*ASGHSS
Trigger: ACTAGAGTGACCGCTTGCCAAGTTCCCTGTCACACT...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CAA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAACAGATTCCACCCATTaGCCAGGTGGTCTCAGGCCC +
Preference number: 3 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMETDSTH*PGGLRP
Trigger: GGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR GCA 72 bp CAGTTTCAGGTCAGTGGCCCAAGCAATGCGGTGTTGTaGTTTGGTGTAGAATCAGTACAGCCTTGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: QFQVSGPSNAVL*FGVESVQPCLA
Trigger: AGCCAAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCACTGACCTGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR GCA 72 bp AAACCATCGGAGTGGTTTGCTCAATTAGGCTCAATTTaGAGTGGGGTAGGTACATCCCACGAACACACAGGA +
Preference number: 3 (lower is better)
Translates to: KPSEWFAQLGSI*SGVGTSHEHTG
Trigger: TCCTGTGTGTTCGTGGGATGTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR GCA 72 bp ACTATGACAGGGGAAGGTGAAACCATCGGAGTGGTTTaGTCAATTAGGCTCAATTTGCAGTGGGGTAGGTAC +
Preference number: 3 (lower is better)
Translates to: TMTGEGETIGVV*SIRLNLQWGRY
Trigger: GTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGATGGTTTCACCTTCCCCTGTCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 72 bp ATCGGAGTGGTTTGCTCAATTAGGCTCAATTTGCAGTaGGGTAGGTACATCCCACGAACACACAGGATTCTG +
Preference number: 3 (lower is better)
Translates to: IGVVCSIRLNLQ*GRYIPRTHRIL
Trigger: CAGAATCCTGTGTGTTCGTGGGATGTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 72 bp TTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTaGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGA +
Preference number: 3 (lower is better)
Translates to: FSEENSFPVSGQ*PKQCGVVLWCR
Trigger: TCTACACCAAAGCACAACACCGCATTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CAA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCTTCCCAGGCTAACTTaGGCCAGTAATCCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSLPRLT*ASNPAQ
Trigger: CTGAGCTGGATTACTGGCCAAAGTTAGCCTGGGAAG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CAA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCCCTGCCCACTTCTCTaGTGCTTATTATGTATGCTG +
Preference number: 3 (lower is better)
Translates to: LRVHVRASTGNISMTTSAPCPLL*CLLCML
Trigger: CAGCATACATAATAAGCACAAGAGAAGTGGGCAGGG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR-3UTR CAA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAACACACCAGGGTGATCTaGCATAAGCATTTTATGCCC +
Preference number: 3 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEHTRVI*HKHFMP
Trigger: GGGCATAAAATGCTTATGCAAGATCACCCTGGTGTG...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 72 bp CACCAGGAAGGGAGACTGTGTCGATTAATATATGTTTaGACCTATCTACACGGCTGTTTCTGGGATGAAGGG +
Preference number: 3 (lower is better)
Translates to: HQEGRLCRLIYV*TYLHGCFWDEG
Trigger: CCCTTCATCCCAGAAACAGCCGTGTAGATAGGTTCAAACATATATTAATCGACACAGTCTCCCTTCCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 72 bp TGCCCTGCCCACTTCTCTTGTGCTTATTATGTATGCTaGTATCTTAGAAAACTGCCAGTTTATCTCATTTTT +
Preference number: 3 (lower is better)
Translates to: CPAHFSCAYYVC*YLRKLPVYLIF
Trigger: AAAAATGAGATAAACTGGCAGTTTTCTAAGATATCAGCATACATAATAAGCACAAGAGAAGTGGGCAGGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR TCA 72 bp TATATTACTTTAGTAGTTTGTTCAGCCATGCAAGTTTaGCTGGATCCACATGTATGTAGGTCTTGTCAACAG +
Preference number: 3 (lower is better)
Translates to: YITLVVCSAMQV*LDPHVCRSCQQ
Trigger: CTGTTGACAAGACCTACATACATGTGGATCCAGTCAAACTTGCATGGCTGAACAAACTACTAAAGTAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR GCA 72 bp ACAAAACCTTACATCAGTACATCGTCTTTAAGAAGGTaGTCTATAGATGAGCTGGTATTAAGTTCCAAGGAT +
Preference number: 3 (lower is better)
Translates to: TKPYISTSSLRR*SIDELVLSSKD
Trigger: ATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAAAGACGATGTACTGATGTAAGGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CCA 72 bp TTTAATTCAGTTAAGGGTTCATGTGAGGGCCTCAACTaGAAACATATCTATGACCACATCAGCTTATTAATT +
Preference number: 3 (lower is better)
Translates to: FNSVKGSCEGLN*KHIYDHISLLI
Trigger: AATTAATAAGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAACTGAATTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCCTCGGTGGGGTTGTTTaGCGTCTGCTCCTGACACCC +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGLGGVV*RLLLTP
Trigger: GGGTGTCAGGAGCAGACGGCAAACAACCCCACCGAG...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCCTTTGGTGGGGGCGATaGCTCCTCAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGLWWGR*LLNWLC
Trigger: GCAGAGCCAGTTGAGGAGGCATCGCCCCCACCAAAG...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTAAGCCCCCTGCCTTCTaGGACCTGGGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSKPPAF*DLGKES
Trigger: GCTCTCCTTCCCCAGGTCCCAGAAGGCAGGGGGCTT...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTTCTGCTGGGGACTTTaGTGGGGGCGATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGFCWGL*WGRCLL
Trigger: GAGGAGGCATCGCCCCCACCAAAGTCCCCAGCAGAA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 72 bp ACTCAGCATGAGTTCTGGCTGAGTGTGACAGGGAACTaGGCAAGCGGTCACTCTAGTGTCCGTGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TQHEFWLSVTGN*ASGHSSVREAL
Trigger: GAGGGCTTCACGGACACTAGAGTGACCGCTTGCCAAGTTCCCTGTCACACTCAGCCAGAACTCATGCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCGTTGCGAAAGCCCCCTaGCTTCTGGGACCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAVAKAP*LLGPGE
Trigger: TTCCCCAGGTCCCAGAAGGCAGGGGGCTTTCGCAAC...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTCACAGGGGATTCAGTaGGCAGAGTCCCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGSQGIQ*AESLLW
Trigger: CCACAACAGGGACTCTGCCCACTGAATCCCCTGTGA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCGTTACTTACTTCAGCTaGCCTGTCTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGVTYFS*PVWAES
Trigger: GCTCTCAGCCCAGACAGGTCAGCTGAAGTAAGTAAC...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCGGGTCTTCTGGAGTTTaGACGTCAACCTCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGGSSGV*TSTSAR
Trigger: CCTAGCTGAGGTTGACGTCCAAACTCCAGAAGACCC...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTAGGAGAGCGAGTAGGTaGGGGGAAGATGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFRRASR*GEDGAW
Trigger: CCAGGCACCATCTTCCCCCCACCTACTCGCTCTCCT...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTAAGTTCCTCTGTGCCTaGTGTGTGGCTGGCAACGCT +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSKFLCA*CVAGNA
Trigger: AGCGTTGCCAGCCACACACCAGGCACAGAGGAACTT...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCCTGGGTGGGCTGGCTaGCTGTGGGAGCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSPGWAG*LWEPCE
Trigger: CTCACAAGGCTCCCACAGCCAGCCAGCCCACCCAGG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCGATTGCAGTCGGCCTTaGAGGTCGCAGAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVADCSRP*RSQSSP
Trigger: GGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATC...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTGCTGGGGACTTTGGTaGGGGCGATGCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFCWGLW*GRCLLN
Trigger: GTTGAGGAGGCATCGCCCCCACCAAAGTCCCCAGCA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCGGCTGGGGGTTCTGCTaGGGACTTTGGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSGWGFC*GLWWGR
Trigger: TCGCCCCCACCAAAGTCCCCAGCAGAACCCCCAGCC...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCACATGTGGGCACGGTaGGCTACGTCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSHMWAR*ATSAAS
Trigger: GGAGGCTGCAGACGTAGCTCACCGTGCCCACATGTG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTGGTGCCTGGTTGCTTaGGTCTTCCCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAWCLVA*VFPITA
Trigger: GGCTGTGATGGGGAAGACTCAAGCAACCAGGCACCA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTATGACAGGGGAAGGTaGAACCATCGGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGYDRGR*NHRSGL
Trigger: CAAACCACTCCGATGGTTTCACCTTCCCCTGTCATA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTGCTGGGATTTGCTCCTaGGGTGGTGAGGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSAGICS*GGEVVS
Trigger: TGAAACAACCTCACCACCGCAGGAGCAAATCCCAGC...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTGGGGGAAGTTTGGATTaGAATGTTGCGAAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSGGSLD*NVAKAP
Trigger: GGGGGCTTTCGCAACATTGCAATCCAAACTTCCCCC...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTGTAGTGTGGGGTTTTaGTCGTGGTGGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGCSVGF*SWWESG
Trigger: ACCAGATTCCCACCACGAGCAAAACCCCACACTACA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTCCTGTTGTGGTGTGTTaGCCGAAGTTCACATGTGGG +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSPVVVC*PKFTCG
Trigger: CCCACATGTGAACTTCGGCCAACACACCACAACAGG...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTCACCTTGGGGACCCTTaGGAGGAATGCATGGGACAC +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFHLGDP*EECMGH
Trigger: GTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTG...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTGGGCTGGCTGGCTGTaGGAGCCTTGTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSWAGWL*EPCEGE
Trigger: TTCCCCCTCACAAGGCTCCCACAGCCAGCCAGCCCA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATCTTCCTGGGTGGGCTaGCTGGCTGTGGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQSSWVG*LAVGAL
Trigger: CAAGGCTCCCACAGCCAGCCAGCCCACCCAGGAAGA...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCAGGCGAGGAGCACCTTaGAGCAGTGGAATTACCTGC +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQARRGAP*SSGITC
Trigger: GCAGGTAATTCCACTGCTTCAAGGTGCTCCTCGCCT...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTACCCTGGGGTGGCCTaGCTCTGCCACAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSYPGVA*LCHRQK
Trigger: TTTCTGCCTGTGGCAGAGTCAGGCCACCCCAGGGTA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCGGCAGAGAAGAAGCATaGTGGTTTAGGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAGREEA*WFRVGP
Trigger: AGGGCCCACCCTAAACCATCATGCTTCTTCTCTGCC...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCATGGTCCCCCTTCCTTaGACAATGAGCCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAMVPLP*TMSQAL
Trigger: CAAAGCCTGGCTCATTGTGCAAGGAAGGGGGACCAT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTCAATCATAGAGAACTaGTGGCCAGGATGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGSIIEN*WPGWSG
Trigger: ACCACTCCATCCTGGCCAGCAGTTCTCTATGATTGA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCGATTCCTCCACAGATTaGAGTCGGCCTTGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQADSSTD*SRPWRS
Trigger: CGACCTCCAAGGCCGACTGCAATCTGTGGAGGAATC...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCGGGGAAGATGGTGCCTaGTTGCTTGAGTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAGEDGA*LLESSP
Trigger: TGGGGAAGACTCAAGCAACCAGGCACCATCTTCCCC...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTGCCTGGTGTGTGGCTaGCAACGCTGGTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFCLVCG*QRWWHL
Trigger: TAAATGCCACCAGCGTTGCCAGCCACACACCAGGCA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTTCTGTGCCTGGTGTGTaGCTGGCAACGCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSASVPGV*LATLVA
Trigger: TGCCACCAGCGTTGCCAGCCACACACCAGGCACAGA...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCCTACACGGCTGTTTCTaGGATGAAGGGATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGLHGCF*DEGMRN
Trigger: GTTTCTCATCCCTTCATCCCAGAAACAGCCGTGTAG...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTGCGGTGTTGTGCTTTaGTGTAGAATCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGCGVVL*CRISTA
Trigger: GGCTGTACTGATTCTACACCAAAGCACAACACCGCA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATCAGGGGCTGAGGTCTaGGATGAGCTGGGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQSGAEV*DELGSD
Trigger: ATCAGACCCCAGCTCATCTCAGACCTCAGCCCCTGA...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAGCTGGCACGCGGTTCTaGTCTTGGAAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITAGTRF*SWKKLA
Trigger: AGCCAGCTTCTTCCAAGATCAGAACCGCGTGCCAGC...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCATGCATGGGACACCTTaGCCCTTCGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSMHGTP*PFEAHP
Trigger: AGGATGGGCCTCGAAGGGTCAAGGTGTCCCATGCAT...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCAAACTCCAGTGTGTCTaGCTCGGTGGGGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAKLQCV*LGGVVC
Trigger: GCAAACAACCCCACCGAGTCAGACACACTGGAGTTT...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTATGATGATGTATGTTTaGTTGGCCTCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSMMMYV*LASGAE
Trigger: CTCAGCCCCTGAGGCCAAGCAAACATACATCATCAT...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTCCTCAACTGGCTCTaGTTCCTCCAGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQALLNWL*FLQTLQ
Trigger: TTGCAGAGTCTGGAGGAAGCAGAGCCAGTTGAGGAG...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCTTTATCAAGGGAGGCTaGCACGCGGTTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAFIKGG*HAVLIL
Trigger: CAAGATCAGAACCGCGTGCCAGCCTCCCTTGATAAA...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCATCATAGAGAACTGCTaGCCAGGATGGAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAIIENC*PGWSGP
Trigger: AGGACCACTCCATCCTGGCCAGCAGTTCTCTATGAT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCAGACTGGGGGAAGTTTaGATTGCAATGTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGRLGEV*IAMLRK
Trigger: CTTTCGCAACATTGCAATCCAAACTTCCCCCAGTCT...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCACTTTGGGAGGCTGTTaGCATTTCCACCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVATLGGC*HFHQGL
Trigger: AAGTCCCTGGTGGAAATGCCAACAGCCTCCCAAAGT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTCTTGGGAGGAATGCATaGGACACCTTGACCCTTCGA +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFLGRNA*DTLTLR
Trigger: TCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAG...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCATTGCTTTGCACCTTaGGGACCCTTGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAHCFAP*GPLGGM
Trigger: CATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATG...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTGGCTGGCAACGCTGGTaGCATTTAAGCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAGWQRW*HLSRRW
Trigger: CCACCTCCTGCTTAAATGCCACCAGCGTTGCCAGCC...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCACCCATTTGCCAGGTaGTCTCAGGCCCTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSHPFAR*SQALGR
Trigger: TCTGCCTAGGGCCTGAGACCACCTGGCAAATGGGTG...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCAGGCTCAATTTGCAGTaGGGTAGGTACATCCCACGA +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVARLNLQ*GRYIPR
Trigger: TCGTGGGATGTACCTACCCCACTGCAAATTGAGCCT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCCAGTTTCAGGTCAGTaGCCCAAGCAATGCGGTGTT +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAPVSGQ*PKQCGV
Trigger: AACACCGCATTGCTTGGGCCACTGACCTGAAACTGG...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 72 bp GAAACCATCGGAGTGGTTTGCTCAATTAGGCTCAATTaGCAGTGGGGTAGGTACATCCCACGAACACACAGG +
Preference number: 4 (lower is better)
Translates to: ETIGVVCSIRLN*QWGRYIPRTHR
Trigger: CCTGTGTGTTCGTGGGATGTACCTACCCCACTGCAAATTGAGCCTAATTGAGCAAACCACTCCGATGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 72 bp TCCCAGTTTCAGGTCAGTGGCCCAAGCAATGCGGTGTaGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SQFQVSGPSNAV*CFGVESVQPCL
Trigger: CAAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCACTGACCTGAAACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTAGTTGCGCCCTTCAGTaGGAGCTCGAGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSSCALQ*ELELSP
Trigger: TGGAGAAAGCTCGAGCTCTCACTGAAGGGCGCAACT...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTAAGGTGCATGCACCATaGGATGACAGAGCCTTAATT +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSKVHAP*DDRALI
Trigger: AATTAAGGCTCTGTCATCTCATGGTGCATGCACCTT...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTCGGCTGTTTCTGGGATaGAGGGATGAGAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFRLFLG*RDEKQC
Trigger: ACACTGTTTCTCATCCCTTCATCCCAGAAACAGCCG...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCGACCCTTGGGAGGAATaGATGGGACACCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSDPWEE*MGHLDP
Trigger: AGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTC...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTACAGGACCATTGCTTTaGACCTTGGGGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSATGPLL*TLGTLG
Trigger: CCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGT...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCTGGAACCTGCCTTCCTaGTGCCGAAAATCATACTCT +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAWNLPS*CRKSYS
Trigger: AGAGTATGATTTTCGGCAGCAGGAAGGCAGGTTCCA...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCAGATTCCACCCATTTaGCAGGTGGTCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSQIPPI*QVVSGP
Trigger: AGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCAGCACCTTGAAGCAGTaGAATTACCTGCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVASTLKQ*NYLQRM
Trigger: CATCCTCTGCAGGTAATTCCACTGCTTCAAGGTGCT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTAGGTCTGAGATGAGCTaGGGTCTGATATCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFRSEMS*GLISAS
Trigger: GCTTGCAGATATCAGACCCCAGCTCATCTCAGACCT...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTCCTCTCCTCTTAGTATaGGAAATCCTGTTGGCCATT +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSPLLLV*EILLAI
Trigger: AATGGCCAACAGGATTTCCCATACTAAGAGGAGAGG...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCACAGCCGGGTCTTCTaGAGTTTGGACGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSHSRVF*SLDVNL
Trigger: GAGGTTGACGTCCAAACTCCAGAAGACCCGGCTGTG...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACATGTGGCTGGCAACGCTaGTGGCATTTAAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITCGWQR*WHLSRR
Trigger: CCTCCTGCTTAAATGCCACCAGCGTTGCCAGCCACA...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 72 bp TGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTTaGAATTACACTTATCCAGCACAGCCACACCAACAA +
Preference number: 4 (lower is better)
Translates to: WALEQLQLLKSS*NYTYPAQPHQQ
Trigger: TTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTCAAAGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTAAGGTCTTTGTCATCTaGGTTGTCTTTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSKVFVI*VVFGQK
Trigger: CTTTTGCCCAAAGACAACTCAGATGACAAAGACCTT...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAACAACCAGAAGGAATCTaGGCCTTTCCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQQPEGI*AFPSYP
Trigger: GGGGTAGGATGGAAAGGCTCAGATTCCTTCTGGTTG...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAAGCAGTGGAATTACCTaGAGAGGATGGTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITSSGIT*RGWSPF
Trigger: GAAGGGGGACCATCCTCTGCAGGTAATTCCACTGCT...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCTCCTTGAATCTCACCTaGTGGGATTTGCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSSLNLT*WDLLLR
Trigger: CCGCAGGAGCAAATCCCAGCAGGTGAGATTCAAGGA...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCGCTTCCTCCAGACTCTaGAAAACTTCATGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAASSRL*KTSWNL
Trigger: CAGGTTCCATGAAGTTTTGCAGAGTCTGGAGGAAGC...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCAGTGGCCCAAGCAATaGGGTGTTGTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSQWPKQ*GVVLWC
Trigger: ACACCAAAGCACAACACCGCATTGCTTGGGCCACTG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAGCAGAGTCCCTGTTGTaGTGTGTTGGCCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITAESLL*CVGRSS
Trigger: TGAACTTCGGCCAACACACCACAACAGGGACTCTGC...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCCTCACAAAACCCAGTaGGGTATGACCAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSPHKTQ*GMTRTG
Trigger: TCCTGTCCTGGTCATACCCCACTGGGTTTTGTGAGG...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTATGGGAAATCCTGTTaGCCATTCCCAGCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAYGKSC*PFPASR
Trigger: TCTAGAGGCTGGGAATGGCCAACAGGATTTCCCATA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAAACTGCTGGCCAGGATaGAGTGGTCCTCTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMENCWPG*SGPLLL
Trigger: TAAGAGGAGAGGACCACTCCATCCTGGCCAGCAGTT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTGCCATTGAGCCTCAGTaGGAAGGATCAGGACCATAC +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAAIEPQ*EGSGPY
Trigger: GTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGC...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCACTTTCATATTTTGCTaGGCCATTGAGCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVATFIFC*AIEPQW
Trigger: CCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATTGAATCTCACCTGCTaGGATTTGCTCCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQLNLTC*DLLLRW
Trigger: CCACCGCAGGAGCAAATCCCAGCAGGTGAGATTCAA...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAACCTGAATGGCAGCTGTaGCTTTCTCTAAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEPEWQL*LSLRTS
Trigger: GGAGGTCCTTAGAGAAAGCCACAGCTGCCATTCAGG...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAACATGATGGTTTAGGGTaGGCCCTGGAACAGCTACAG +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEHDGLG*ALEQLQ
Trigger: CTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATG...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTGGTCCCATCTTCCTTaGATCTCACCTGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSWSHLP*ISPAGI
Trigger: AATCCCAGCAGGTGAGATTCAAGGAAGATGGGACCA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAGTGAGTCCGTGGAGATaGAGGAACACACGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITVSPWR*RNTRFL
Trigger: AAGGAAACGTGTGTTCCTTCATCTCCACGGACTCAC...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAACTCTACACTGTATATaGTGCACGCCGTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQTLHCI*CTPCSG
Trigger: GCCAGAACACGGCGTGCATCATATACAGTGTAGAGT...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTACGGTGAGCTACGTCTaGAGCCTCCATGATGATGTA +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSATVSYV*SLHDDV
Trigger: TACATCATCATGGAGGCTGCAGACGTAGCTCACCGT...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTAAGATGGTGCCTGGTTaGTTGAGTCTTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSKMVPG*LSLPHH
Trigger: GTGATGGGGAAGACTCAAGCAACCAGGCACCATCTT...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTTGAAAACTGGGAAATaGTTCCTGAGACTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQALKTGK*FLRLGE
Trigger: TTCCCCCAGTCTCAGGAAGCATTTCCCAGTTTTCAA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTGCAGAGTTCACCCCGTaGCAGGTGAATTTGATTAAT +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFAEFTP*QVNLIN
Trigger: ATTAATCAAATTCACCTGGCACGGGGTGAACTCTGC...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTTCTCTTGGTTCGAGTaGAGAGATTCCTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFFSWFE*RDSSTD
Trigger: ATCTGTGGAGGAATCTCTGCACTCGAACCAAGAGAA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAAGGGCAGGCCTTAAGTaGAGTGGATTTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQRAGLK*SGFPIS
Trigger: TGAGATGGGAAATCCACTGCACTTAAGGCCTGCCCT...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAAGGATGGGAAGGAAGTaGTTGGCATCTTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITRMGRK*LASWRC
Trigger: ACACCTCCAAGATGCCAAGCACTTCCTTCCCATCCT...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCCACAGGCAGAAAGGTaGATGCACCATGAGATGACA +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAPQAER*MHHEMT
Trigger: TGTCATCTCATGGTGCATGCACCTTTCTGCCTGTGG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCACCATCGGAGTGGTTTaGTCAATTAGGCTCAATTTG +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVATIGVV*SIRLNL
Trigger: CAAATTGAGCCTAATTGAGCAAACCACTCCGATGGT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAATTACCTGCAGAGGATaGTCCCCCTTCCTTGCACAA +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEITCRG*SPFLAQ
Trigger: TTGTGCAAGGAAGGGGGACCATCCTCTGCAGGTAAT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCTGCCTTCTGGGACCTaGGGAAGGAGAGCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSLPSGT*GRRASR
Trigger: CCTACTCGCTCTCCTTCCCCAGGTCCCAGAAGGCAG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCACTTTAATTTTCTCTTaGTTCGAGTGCAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGTLIFS*FECRDS
Trigger: GGAATCTCTGCACTCGAACCAAGAGAAAATTAAAGT...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTATGCACGCCGTGTTCTaGCAGGTACTGCAATTGTTG +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAMHAVF*QVLQLL
Trigger: CAACAATTGCAGTACCTGCCAGAACACGGCGTGCAT...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTACTCAGCATGAGTTCTaGCTGAGTGTGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSTQHEF*LSVTGN
Trigger: GTTCCCTGTCACACTCAGCCAGAACTCATGCTGAGT...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTTGGGAAGGAAGTGCTTaGCATCTTGGAGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAWEGSA*HLGGVG
Trigger: TCCAACACCTCCAAGATGCCAAGCACTTCCTTCCCA...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTAACAAGTTTATACCCTaGGGTGGCCTGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSNKFIP*GGLTLP
Trigger: TGGCAGAGTCAGGCCACCCCAGGGTATAAACTTGTT...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTCAGCTCACATAATGTaGAACGTGCTAAGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: VHTKNRFHPFARWSQALGSAHIM*NVLRVY
Trigger: ATAAACTCTTAGCACGTTCCACATTATGTGAGCTGA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTTTGCCGTCTGCTCCTaGCACCCAGGGGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSFAVCS*HPGADF
Trigger: GAAATCTGCCCCTGGGTGTCAGGAGCAGACGGCAAA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAATCTCCCTGTTGCTCTaGAGTTTGGTCTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEISLLL*SLVSLL
Trigger: AAGGAGTGAGACCAAACTTCAGAGCAACAGGGAGAT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAGCATGCACCATGAGATaGCAGAGCCTTAATTTGGGA +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITACTMR*QSLNLG
Trigger: TCCCAAATTAAGGCTCTGTCATCTCATGGTGCATGC...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTTTCACTGCATCACTATaGCAGGGGAAGGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAFTASL*QGKVKP
Trigger: TGGTTTCACCTTCCCCTGTCATAGTGATGCAGTGAA...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTTTTGGATTGCAATGTTaGGAAAGCCCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAFGLQC*ESPLPS
Trigger: AGAAGGCAGGGGGCTTTCGCAACATTGCAATCCAAA...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAGGACCTCCAAGTTCCTaGTTCCAAGCATATGCTAAC +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEGPPSS*FQAYAN
Trigger: GTTAGCATATGCTTGGAAGCAGGAACTTGGAGGTCC...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTACACACAGGATTCTGTaGTCTGCAAAGATTCTAGCT +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFTHRIL*SAKILA
Trigger: AGCTAGAATCTTTGCAGAGCACAGAATCCTGTGTGT...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCAATAGCTTTGTTCACTaGATCACTATGACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVANSFVH*ITMTGE
Trigger: TTCCCCTGTCATAGTGATGCAGTGAACAAAGCTATT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCTATAGACTGCTTGGTTaGCTGGATCTCTTAATTCTG +
Preference number: 4 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAYRLLG*LDLLIL
Trigger: CAGAATTAAGAGATCCAGGCAACCAAGCAGTCTATA...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTGCTAGTGGTATAGACTaGTTGGTTGCCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSASGID*LVAWIS
Trigger: AGAGATCCAGGCAACCAAGCAGTCTATACCACTAGC...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTGTTGCTCTGAAGTTTaGTCTCACTCCTTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LKVHTKNRFHPFARWSQACCSEV*SHSLKE
Trigger: CTCTTTCAAGGAGTGAGACCAAACTTCAGAGCAACA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCAGAGAGGTTACCGTTaGCCTGGATGGCACTTTGGG +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSQRGYR*PGWHFG
Trigger: CCCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATTGTGAGGGGGAACTGTaGGTCCGTGGAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYCEGEL*VRGDEG
Trigger: TCCTTCATCTCCACGGACTCACAGTTCCCCCTCACA...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAACCCAACACACCAGGGTaGTCTTGCATAAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEPNTPG*SCISIL
Trigger: TAAAATGCTTATGCAAGATCACCCTGGTGTGTTGGG...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTCAGCCATGCAAGTTTaGCTGGATCCACATGTATGT +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSSAMQV*LDPHVC
Trigger: ACATACATGTGGATCCAGTCAAACTTGCATGGCTGA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAACTCACTTTCATATTTTaGTGGGCCATTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMELTFIF*WAIEPQ
Trigger: CTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAG...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTCACCTGCTGGGATTTaGTCCTGCGGTGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSSPAGI*SCGGEV
Trigger: AACCTCACCACCGCAGGAGCAAATCCCAGCAGGTGA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAAACCTGCCTTCCTGCTaGCGAAAATCATACTCTACA +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQNLPSC*RKSYST
Trigger: TGTAGAGTATGATTTTCGGCAGCAGGAAGGCAGGTT...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAACTTCATGGAACCTaGCTTCCTGCTGCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSKLHGT*LPAAEN
Trigger: ATTTTCGGCAGCAGGAAGGCAGGTTCCATGAAGTTT...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAACAATTAGGCTCAATTTaGAGTGGGGTAGGTACATCC +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQQLGSI*SGVGTS
Trigger: GGATGTACCTACCCCACTGCAAATTGAGCCTAATTG...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTGAGATGATTACTTCCTaGACAATTTGGAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFEMITS*TIWKLQ
Trigger: CTGGAGTTTCCAAATTGTCCAGGAAGTAATCATCTC...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAGGGTTTTGCTCGTGGTaGGAATCTGGTCTTAAAACT +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEGFCSW*ESGLKT
Trigger: AGTTTTAAGACCAGATTCCCACCACGAGCAAAACCC...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATTTATGAACCCAGGATaGGAAGGAAGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQFMNPG*EGSAWH
Trigger: ATGCCAAGCACTTCCTTCCCATCCTGGGTTCATAAA...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCGTTCTTTTCCATTGCTaGGGCCAACTGACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSVLFHC*GQLTVD
Trigger: ATCAACTGTCAGTTGGCCCCAGCAATGGAAAAGAAC...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTATCTGTATTCAAGAATaGACAAACAGGCCGGGAAAT +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFICIQE*TNRPGN
Trigger: ATTTCCCGGCCTGTTTGTCCATTCTTGAATACAGAT...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTGTGAGGGCCTCAACTaGAAACATATCTATGACCAC +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSCEGLN*KHIYDH
Trigger: GTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATATTTTGCTGGGCCATTaGGCCTCAGTGGGAAGGATC +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYILLGH*ASVGRI
Trigger: GATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAAT...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATTTGCTCCTGCGGTGGTaGGGTTGTTTCACAAACTCC +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYLLLRW*GCFTNS
Trigger: GGAGTTTGTGAAACAACCTCACCACCGCAGGAGCAA...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTAGAGAGGATGGGAGATaGTTACTTCCTGGACAATTT +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAREDGR*LLPGQF
Trigger: AAATTGTCCAGGAAGTAATCATCTCCCATCCTCTCT...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTTTCTTTTGGGTTTATaGACCCAGGATGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSFLLGL*TQDGKE
Trigger: TTCCTTCCCATCCTGGGTTCATAAACCCAAAAGAAA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTGCCCACTTCTCTTGTaGTTATTATGTATGCTGATA +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFCPLLL*LLCMLI
Trigger: TATCAGCATACATAATAAGCACAAGAGAAGTGGGCA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAATGCATAAGCATTTTATaGCCTGCCCACTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQCISIL*PAHFSC
Trigger: ACAAGAGAAGTGGGCAGGGCATAAAATGCTTATGCA...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAACAGGATTCTGTGCTCTaGAAAGATTCTAGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQQDSVL*KDSSLD
Trigger: GTCTAAGCTAGAATCTTTGCAGAGCACAGAATCCTG...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAAGCAATGCGGTGTTGTaGTTTGGTGTAGAATCAGTA +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMESNAVL*FGVESV
Trigger: TACTGATTCTACACCAAAGCACAACACCGCATTGCT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCTGGCCAGGATGGAGTaGTCCTCTCCTCTTAGTATG +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSLARME*SSPLSM
Trigger: CATACTAAGAGGAGAGGACCACTCCATCCTGGCCAG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATACCTGGATGGCACTTTaGGAGGCTGTTGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYTWMAL*EAVGIS
Trigger: GGAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGT...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTAGGTTACCGTTGACCTaGATGGCACTTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSRLPLT*MALWEA
Trigger: AGCCTCCCAAAGTGCCATCCAGGTCAACGGTAACCT...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCATCCAAAGGGTGTATaGAGTTACTTACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAHPKGV*SYLLQL
Trigger: CAGCTGAAGTAAGTAACTCCATACACCCTTTGGATG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCCTTCTCCCATCACCTaGACGTGTGTCATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSPSPIT*TCVIQR
Trigger: CCTTTGGATGACACACGTCCAGGTGATGGGAGAAGG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATTTGGAAGGTGTAGTGTaGGGTTTTGCTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYLEGVV*GFARGG
Trigger: CCCACCACGAGCAAAACCCCACACTACACCTTCCAA...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCAGGTGACCATTGTCTaGTCACCAGGAAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSQVTIV*SPGRET
Trigger: AGTCTCCCTTCCTGGTGACCAGACAATGGTCACCTG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACACTCTCTTTTCTTCAGTaGGGGAAACTTATCTTCCTA +
Preference number: 4 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITLSFLQ*GKLIFL
Trigger: TAGGAAGATAAGTTTCCCTCACTGAAGAAAAGAGAG...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCACGTTTCCTTTGACTaGGATGACAGTGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSHVSFD*DDSEPR
Trigger: CCTTGGCTCACTGTCATCTCAGTCAAAGGAAACGTG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAACTGTTAGTTTTGAGTaGCACCAGATTCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMETVSFE*HQILVI
Trigger: AATCACCAGAATCTGGTGTCACTCAAAACTAACAGT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTAAGGTGCTCTATAGATaGGCTGGTATTAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSKVLYR*AGIKFQ
Trigger: TTGGAACTTAATACCAGCTCATCTATAGAGCACCTT...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTTTTCACTGTTTATATaGAAGAAGTGTAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WPKQCGVVLWCRISTALFFSLFI*KKCSGS
Trigger: AGACCCACTACACTTCTTGCATATAAACAGTGAAAA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCACAAATTCCTCCTTTaGGGCCATTGTTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAHKFLL*GHCFLS
Trigger: TGAAAGAAAACAATGGCCCCAAAGGAGGAATTTGTG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAGTGATAAATATCATCTaGAACCTGAATGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQVINII*NLNGSC
Trigger: ACAGCTGCCATTCAGGTTCCAGATGATATTTATCAC...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAACATCTGAGTTGTCTTTaGGCAAAAGCAATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: INFSEENSFPVSGQWPKQHLSCL*AKAIQV
Trigger: AACCTGAATTGCTTTTGCCCAAAGACAACTCAGATG...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCTCTGCAAAACTTCATaGAACCTGCCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSLCKTS*NLPSCC
Trigger: GCAGCAGGAAGGCAGGTTCCATGAAGTTTTGCAGAG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATATATCATCTGGAACCTaGATGGCAGCTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYISSGT*MAAVAF
Trigger: GAAAGCCACAGCTGCCATTCAGGTTCCAGATGATAT...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTTTATATATTCCGGTCTaGTTCTGTGGGCTTAAACAT +
Preference number: 4 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSLYIPV*FCGLKH
Trigger: ATGTTTAAGCCCACAGAATCAGACCGGAATATATAA...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTGCAGTGATTTTCACATaGATAAGTGAGTATGCAGTT +
Preference number: 4 (lower is better)
Translates to: LRVHVRASTGNISMTTSAAVIFT*ISEYAV
Trigger: AACTGCATACTCACTTATTCATGTGAAAATCACTGC...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATCATCTGGAACCTGAATaGCAGCTGTGGCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYHLEPE*QLWLSL
Trigger: TAGAGAAAGCCACAGCTGCCATTCAGGTTCCAGATG...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTGTGCCAGACTCCCAATaGGTGAATTCCAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSVPDSQ*VNSKRN
Trigger: GTTTCTTTTGGAATTCACTCATTGGGAGTCTGGCAC...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATAGGTACTGCAATTGTTaGGATCTTGGCCAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYRYCNC*DLGQFD
Trigger: ATCGAACTGGCCAAGATCTCAACAATTGCAGTACCT...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTAGTTTTTCAATCAGGTaGCCATTGTCTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSSFSIR*PLSGHQ
Trigger: CTGGTGACCAGACAATGGTCACCTGATTGAAAAACT...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATAGGTGGAGAAATAAATaGCCTGGAGGTTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYRWRNK*PGGLLV
Trigger: AACAAGCAAACCTCCAGGTCATTTATTTCTCCACCT...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATAAGCATTTTATGCCCTaGCCACTTCTCTTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYKHFMP*PLLLCL
Trigger: TAAGCACAAGAGAAGTGGGCAGGGCATAAAATGCTT...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTAGAAGCTGGCTGTCTTaGACAAAAAGACAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSRSWLS*TKRQQK
Trigger: CTTTTGTTGTCTTTTTGTTCAAGACAGCCAGCTTCT...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR GCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTCGTCTTTAAGAAGGTaGTCTATAGATGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSSSLRR*SIDELV
Trigger: TACCAGCTCATCTATAGAGCACCTTCTTAAAGACGA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTGCTTTCTCCAAGTCTTaGATTACATTCAAAAGGACT +
Preference number: 4 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSAFSKS*ITFKRT
Trigger: AGTCCTTTTGAATGTAATTCAAGACTTGGAGAAAGC...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR TCA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATCGATTAATATATGTTTaGACCTATCTACACGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYRLIYV*TYLHGC
Trigger: ACAGCCGTGTAGATAGGTTCAAACATATATTAATCG...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
3UTR CAA 72 bp TGGAAACATATCTATGACCACATCAGCTTATTAATTTaGTGTGAGGTACCTCAAACATCTCTTTATCTTCCC +
Preference number: 4 (lower is better)
Translates to: WKHIYDHISLLI*CEVPQTSLYLP
Trigger: GGGAAGATAAAGAGATGTTTGAGGTACCTCACACAAAATTAATAAGCTGATGTGGTCATAGATATGTTTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp GCCTTAAGTGCAGTGGATTTCCCATCTCAGGGAAGTGCGTGGAGTTaGGGGGCTGGGGGATGGTCCCAACCAGCTCAGATCCACCAGAAG +
Preference number: 5 (lower is better)
Translates to: ALSAVDFPSQGSAWS*GAGGWSQPAQIHQK
Trigger: CTTCTGGTGGATCTGAGCTGGTTGGGACCATCCCCCAGCCCCCCAACTCCACGCACTTCCCTGAGATGGGAAATCCACTGCACTTAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp GGAATCACAGGGGATTCAGTGGGCAGAGTCCCTGTTGTGGTGTGTTaGCCGAAGTTCACATGTGGGCACGGTGAGCTACGTCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GITGDSVGRVPVVVC*PKFTCGHGELRLQP
Trigger: AGGCTGCAGACGTAGCTCACCGTGCCCACATGTGAACTTCGGCCAACACACCACAACAGGGACTCTGCCCACTGAATCCCCTGTGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS TCA 90 bp GCCTCCATGATGATGTATGTTTGCTTGGCCTCAGGGGCTGAGGTCTaGGATGAGCTGGGGTCTGATATCTGCAAGCAGGCGAGGAGCACC +
Preference number: 5 (lower is better)
Translates to: ASMMMYVCLASGAEV*DELGSDICKQARST
Trigger: GGTGCTCCTCGCCTGCTTGCAGATATCAGACCCCAGCTCATCTCAGACCTCAGCCCCTGAGGCCAAGCAAACATACATCATCATGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS GCA 90 bp GCTAACAGGACCATTGCTTTGCACCTTGGGGACCCTTGGGAGGAATaGATGGGACACCTTGACCCTTCGAGGCCCATCCTCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: ANRTIALHLGDPWEE*MGHLDPSRPILKML
Trigger: CAGCATCTTGAGGATGGGCCTCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 90 bp TGCTTTGCACCTTGGGGACCCTTGGGAGGAATGCATGGGACACCTTaGCCCTTCGAGGCCCATCCTCAAGATGCTGAGCCAACCTTAAGT +
Preference number: 5 (lower is better)
Translates to: CFAPWGPLGGMHGTP*PFEAHPQDAEPTLS
Trigger: ACTTAAGGTTGGCTCAGCATCTTGAGGATGGGCCTCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp CAAGCATATGCTAACAGGACCATTGCTTTGCACCTTGGGGACCCTTaGGAGGAATGCATGGGACACCTTGACCCTTCGAGGCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: QAYANRTIALHLGDP*EECMGHLDPSRPIL
Trigger: GAGGATGGGCCTCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 90 bp AGTCCCTGTTGTGGTGTGTTGGCCGAAGTTCACATGTGGGCACGGTaGGCTACGTCTGCAGCCTCCATGATGATGTATGTTTGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SPCCGVLAEVHMWAR*ATSAASMMMYVCLA
Trigger: GGCCAAGCAAACATACATCATCATGGAGGCTGCAGACGTAGCTCACCGTGCCCACATGTGAACTTCGGCCAACACACCACAACAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS GCA 90 bp CTGCAAGCAGGCGAGGAGCACCTGCAGAGGATGGTCCCCCTTCCTTaGACAATGAGCCAGGCTTTGACCAGCAGCAAAATTACTCCAAAA +
Preference number: 5 (lower is better)
Translates to: LQAGEEHLQRMVPLP*TMSQALTSSKITPK
Trigger: TTTTGGAGTAATTTTGCTGCTGGTCAAAGCCTGGCTCATTGTGCAAGGAAGGGGGACCATCCTCTGCAGGTGCTCCTCGCCTGCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523970.1
CDS-3UTR CAA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCATGGTGCCTGGTTGCTaGAGTCTTCCCCATCACAGC +
Preference number: 5 (lower is better)
Translates to: VHTKNRFHPFARWSQALGMVPGC*SLPHHS
Trigger: GCTGTGATGGGGAAGACTCAAGCAACCAGGCACCAT...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 90 bp CTCCAAGTTCCTGCTTCCAAGCATATGCTAACAGGACCATTGCTTTaGACCTTGGGGACCCTTGGGAGGAATGCATGGGACACCTTGACC +
Preference number: 5 (lower is better)
Translates to: LQVPASKHMLTGPLL*TLGTLGRNAWDTLT
Trigger: GGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTTGGAAGCAGGAACTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp TGCCTGGTGTGTGGCTGGCAACGCTGGTGGCATTTAAGCAGGAGGTaGATTTTTCTGAATCTAGTGGAGTCACCCTTCTCCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: CLVCGWQRWWHLSRR*IFLNLVESPFSHHL
Trigger: CAGGTGATGGGAGAAGGGTGACTCCACTAGATTCAGAAAAATCCACCTCCTGCTTAAATGCCACCAGCGTTGCCAGCCACACACCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp GATTACTTCCTGGACAATTTGGAAACTCCAGTGTGTCTGACTCGGTaGGGTTGTTTGCCGTCTGCTCCTGACACCCAGGGGCAGATTTCG +
Preference number: 5 (lower is better)
Translates to: DYFLDNLETPVCLTR*GCLPSAPDTQGQIS
Trigger: CGAAATCTGCCCCTGGGTGTCAGGAGCAGACGGCAAACAACCCCACCGAGTCAGACACACTGGAGTTTCCAAATTGTCCAGGAAGTAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCATGATGTATGTTTGCTaGGCCTCAGGGGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: VHTKNRFHPFARWSQALGMMYVC*ASGAEV
Trigger: GACCTCAGCCCCTGAGGCCAAGCAAACATACATCAT...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCGTGGTCCCATCTTCCTaGAATCTCACCTGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: VHTKNRFHPFARWSQALGVVPSS*NLTCWD
Trigger: ATCCCAGCAGGTGAGATTCAAGGAAGATGGGACCAC...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTACTCGGTGGGGTTGTTaGCCGTCTGCTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: WPKQCGVVLWCRISTALFTRWGC*PSAPDT
Trigger: GGTGTCAGGAGCAGACGGCAAACAACCCCACCGAGT...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 90 bp TGGACGTGTGTCATCCAAAGGGTGTATGGAGTTACTTACTTCAGCTaGCCTGTCTGGGCTGAGAGCAGACTCTCTAGCTTCCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: WTCVIQRVYGVTYFS*PVWAESRLSSFPGR
Trigger: CCTTCCTGGGAAGCTAGAGAGTCTGCTCTCAGCCCAGACAGGTCAGCTGAAGTAAGTAACTCCATACACCCTTTGGATGACACACGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 90 bp CTCCACAGATTGCAGTCGGCCTTGGAGGTCGCAGAGTTCACCCCGTaGCAGGTGAATTTGATTAATGTCACTAATCTCCCTGTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: LHRLQSALEVAEFTP*QVNLINVTNLPVAL
Trigger: CAGAGCAACAGGGAGATTAGTGACATTAATCAAATTCACCTGGCACGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp ACAATGTCCTGTTCAGAGAGGTTACCGTTGACCTGGATGGCACTTTaGGAGGCTGTTGGCATTTCCACCAGGGACTTACTGGCTGTGAGT +
Preference number: 5 (lower is better)
Translates to: TMSCSERLPLTWMAL*EAVGISTRDLLAVS
Trigger: ACTCACAGCCAGTAAGTCCCTGGTGGAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTGAACAGGACATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCAACAGGACCATTGCTTaGCACCTTGGGGACCCTTGG +
Preference number: 5 (lower is better)
Translates to: ELHLSSTATPTSLYPGVANRTIA*HLGDPW
Trigger: CCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTGTTCTGCTGGGGACTTaGGTGGGGGCGATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LRVHVRASTGNISMTTSAVLLGT*VGAMPP
Trigger: AGGAGGCATCGCCCCCACCAAAGTCCCCAGCAGAAC...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCGGCATCTTGGAGGTGTaGGAAGGTGTAGTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAGILEV*EGVVWG
Trigger: ACCCCACACTACACCTTCCAACACCTCCAAGATGCC...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp AGCACAGGTCTCACTTTCATATTTTGCTGGGCCATTGAGCCTCAGTaGGAAGGATCAGGACCATACACTTCTCCTAGGCACATCTCCCCT +
Preference number: 5 (lower is better)
Translates to: STGLTFIFCWAIEPQ*EGSGPYTSPRHISP
Trigger: AGGGGAGATGTGCCTAGGAGAAGTGTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAGACCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCCCTGTTGTGGTGTGTaGGCCGAAGTTCACATGTGG +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAPCCGV*AEVHMW
Trigger: CCACATGTGAACTTCGGCCAACACACCACAACAGGG...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCGAGACTGGGGGAAGTTaGGATTGCAATGTTGCGAAA +
Preference number: 5 (lower is better)
Translates to: VHTKNRFHPFARWSQALGETGGS*DCNVAK
Trigger: TTTCGCAACATTGCAATCCAAACTTCCCCCAGTCTC...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTCACTTTGGGAGGCTGTaGGCATTTCCACCAGGGACT +
Preference number: 5 (lower is better)
Translates to: WPKQCGVVLWCRISTALFHFGRL*AFPPGT
Trigger: AGTCCCTGGTGGAAATGCCAACAGCCTCCCAAAGTG...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCTGGGCAGAGTCCCTGTaGTGGTGTGTTGGCCGAAGT +
Preference number: 5 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSWAESL*WCVGRS
Trigger: ACTTCGGCCAACACACCACAACAGGGACTCTGCCCA...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCTGGAGGTTTGCTTGTTaGATGATACATGATGCTCCC +
Preference number: 5 (lower is better)
Translates to: VHTKNRFHPFARWSQALGWRFAC*MIHDAP
Trigger: GGGAGCATCATGTATCATCAAACAAGCAAACCTCCA...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTGGGGGAAGTTTGGATaGCAATGTTGCGAAAGCCCC +
Preference number: 5 (lower is better)
Translates to: WPKQCGVVLWCRISTALFWGKFG*QCCESP
Trigger: GGGGCTTTCGCAACATTGCAATCCAAACTTCCCCCA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTCAGAGAGGTTACCGTaGACCTGGATGGCACTTTGG +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQASERLP*TWMALW
Trigger: CCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTGA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTAATGCATGGGACACCTaGACCCTTCGAGGCCCATCC +
Preference number: 5 (lower is better)
Translates to: LRVHVRASTGNISMTTSANAWDT*TLRGPS
Trigger: GGATGGGCCTCGAAGGGTCAAGGTGTCCCATGCATT...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCATGCTAACAGGACCATaGCTTTGCACCTTGGGGACC +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAMLTGP*LCTLGT
Trigger: GGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCAT...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCTAGGCAGTGAGCCAAGGTCTTaGTCATCTGAGTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: VHTKNRFHPFARWSQALGSEPRS*SSELSL
Trigger: CAAAGACAACTCAGATGACAAAGACCTTGGCTCACT...GCCTAGGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TGGAGTCTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTAGATTGCAGTCGGCCTaGGAGGTCGCAGAGTTCACC +
Preference number: 5 (lower is better)
Translates to: WSLKVHTKNRFHPFARWSRLQSA*EVAEFT
Trigger: GGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCT...AGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAGACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTATGGGAAGGAAGTGCTaGGCATCTTGGAGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: WPKQCGVVLWCRISTALFMGRKC*ASWRCW
Trigger: CCAACACCTCCAAGATGCCAAGCACTTCCTTCCCAT...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTCCCTGCCCACTTCTCTaGTGCTTATTATGTATGCTG +
Preference number: 5 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSPCPLL*CLLCML
Trigger: CAGCATACATAATAAGCACAAGAGAAGTGGGCAGGG...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAACAGATTCCACCCATTaGCCAGGTGGTCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITTDSTH*PGGLRP
Trigger: GGGCCTGAGACCACCTGGCAAATGGGTGGAATCTGT...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 90 bp AGAGAGCTGGTAGGCGGTTTATCAAGGGAGGCTGGCACGCGGTTCTaGTCTTGGAAGAAGCTGGCTGTCTTGAACAAAAAGACAACAAAA +
Preference number: 5 (lower is better)
Translates to: RELVGGLSREAGTRF*SWKKLAVLNKKTTK
Trigger: TTTTGTTGTCTTTTTGTTCAAGACAGCCAGCTTCTTCCAAGATCAGAACCGCGTGCCAGCCTCCCTTGATAAACCGCCTACCAGCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 90 bp ACCTTGAAGCAGTGGAATTACCTGCAGAGGATGGTCCCCCTTCCTTaGACAATGAGCCAGGCTTTGACCAGCAGCAAAATTACTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TLKQWNYLQRMVPLP*TMSQALTSSKITPK
Trigger: TTTTGGAGTAATTTTGCTGCTGGTCAAAGCCTGGCTCATTGTGCAAGGAAGGGGGACCATCCTCTGCAGGTAATTCCACTGCTTCAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp TTGGGCAAAAGCAATTCAGGTTTAAGTTCCTCTGTGCCTGGTGTGTaGCTGGCAACGCTGGTGGCATTTAAGCAGGAGGTGGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LGKSNSGLSSSVPGV*LATLVAFKQEVDFS
Trigger: AGAAAAATCCACCTCCTGCTTAAATGCCACCAGCGTTGCCAGCCACACACCAGGCACAGAGGAACTTAAACCTGAATTGCTTTTGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAACAGGCGAGGAGCACCTaGAAGCAGTGGAATTACCTG +
Preference number: 5 (lower is better)
Translates to: INFSEENSFPVSGQWPKQQARST*KQWNYL
Trigger: CAGGTAATTCCACTGCTTCAAGGTGCTCCTCGCCTG...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTATTTTGCTGGGCCATaGAGCCTCAGTGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAYFAGP*SLSGKD
Trigger: ATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCGACCTGGATGGCACTTaGGGAGGCTGTTGGCATTTC +
Preference number: 5 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSDLDGT*GGCWHF
Trigger: GAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGTC...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAAGATTCCTCCACAGATaGCAGTCGGCCTTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITRFLHR*QSALEV
Trigger: GACCTCCAAGGCCGACTGCAATCTGTGGAGGAATCT...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCCAGGTACTGCAATTGTaGAGATCTTGGCCAGTTCGA +
Preference number: 5 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAQVLQL*RSWPVR
Trigger: TCGAACTGGCCAAGATCTCAACAATTGCAGTACCTG...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 90 bp CCATCTTCCTTGAATCTCACCTGCTGGGATTTGCTCCTGCGGTGGTaGGGTTGTTTCACAAACTCCACTGATTCTAGACTGTTACGCTTT +
Preference number: 5 (lower is better)
Translates to: PSSLNLTCWDLLLRW*GCFTNSTDSRLLRF
Trigger: AAAGCGTAACAGTCTAGAATCAGTGGAGTTTGTGAAACAACCTCACCACCGCAGGAGCAAATCCCAGCAGGTGAGATTCAAGGAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCACAATGAGCCAGGCTTaGACCAGCAGCAAAATTACT +
Preference number: 5 (lower is better)
Translates to: ELHLSSTATPTSLYPGVATMSQA*TSSKIT
Trigger: AGTAATTTTGCTGCTGGTCAAAGCCTGGCTCATTGT...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTGTTTGGATTGCAATGTaGCGAAAGCCCCCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LRVHVRASTGNISMTTSAVWIAM*RKPPAF
Trigger: GAAGGCAGGGGGCTTTCGCAACATTGCAATCCAAAC...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAGTGTGACAGGGAACTaGGCAAGCGGTCACTCTAGT +
Preference number: 5 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSSVTGN*ASGHSS
Trigger: ACTAGAGTGACCGCTTGCCAAGTTCCCTGTCACACT...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCCCAAGCAATGCGGTGTaGTGCTTTGGTGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAPSNAV*CFGVES
Trigger: TGATTCTACACCAAAGCACAACACCGCATTGCTTGG...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 90 bp TCTAGACTGTTACGCTTTAGAAGCACAGGTCTCACTTTCATATTTTaGTGGGCCATTGAGCCTCAGTGGGAAGGATCAGGACCATACACT +
Preference number: 5 (lower is better)
Translates to: SRLLRFRSTGLTFIF*WAIEPQWEGSGPYT
Trigger: AGTGTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAGACCTGTGCTTCTAAAGCGTAACAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp AGACTGTTACGCTTTAGAAGCACAGGTCTCACTTTCATATTTTGCTaGGCCATTGAGCCTCAGTGGGAAGGATCAGGACCATACACTTCT +
Preference number: 5 (lower is better)
Translates to: RLLRFRSTGLTFIFC*AIEPQWEGSGPYTS
Trigger: AGAAGTGTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAGACCTGTGCTTCTAAAGCGTAACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAATGACCAGGACAGGATaGAGGAATCACAGGGGATTC +
Preference number: 5 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEMTRTG*RNHRGF
Trigger: GAATCCCCTGTGATTCCTCAATCCTGTCCTGGTCAT...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GAATTACACTTATCCAGCACAGCCACACCAACAAGTTTATACCCTGGGGTGGCCCCGTGCCAGGTGAATTaGATTAATGTCACTAATCTC +
Preference number: 5 (lower is better)
Translates to: ELHLSSTATPTSLYPGVAPCQVN*INVTNL
Trigger: GAGATTAGTGACATTAATCAAATTCACCTGGCACGG...GGCCACCCCAGGGTATAAACTTGTTGGTGTGGCTGTGCTGGATAAGTGTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTTCAGCCATGCAAGTTaGACTGGATCCACATGTATG +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAFSHAS*TGSTCM
Trigger: CATACATGTGGATCCAGTCAAACTTGCATGGCTGAA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp AAGCATGATGGTTTAGGGTGGGCCCTGGAACAGCTACAGCTGCTGAAATCCTCTTCAGTACAGCCTTGTTaGGCTGTATTTCTAGAAATG +
Preference number: 5 (lower is better)
Translates to: KHDGLGWALEQLQLLKSSSVQPC*AVFLEM
Trigger: CATTTCTAGAAATACAGCCAAACAAGGCTGTACTGA...AGAGGATTTCAGCAGCTGTAGCTGTTCCAGGGCCCACCCTAAACCATCATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTTCACAAATTCCTCCTTaGGGGCCATTGTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: WPKQCGVVLWCRISTALFSQIPP*GPLFSF
Trigger: GAAAGAAAACAATGGCCCCAAAGGAGGAATTTGTGA...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAGAACACACGTTTCCTTaGACTGAGATGACAGTGAGC +
Preference number: 5 (lower is better)
Translates to: INFSEENSFPVSGQWPKQEHTFP*TEMTVS
Trigger: GCTCACTGTCATCTCAGTCAAAGGAAACGTGTGTTC...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAGTTTGGTCTCACTCCTaGAAAGAGAGGATGGGAGAT +
Preference number: 5 (lower is better)
Translates to: INFSEENSFPVSGQWPKQVWSHS*KERMGD
Trigger: ATCTCCCATCCTCTCTTTCAAGGAGTGAGACCAAAC...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTCACACCAGGGTGATCTaGCATAAGCATTTTATGCCC +
Preference number: 5 (lower is better)
Translates to: LRVHVRASTGNISMTTSAHTRVI*HKHFMP
Trigger: GGGCATAAAATGCTTATGCAAGATCACCCTGGTGTG...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTTTCTGTTCTTTTCCATaGCTGGGGCCAACTGACAGT +
Preference number: 5 (lower is better)
Translates to: LRVHVRASTGNISMTTSAFCSFP*LGPTDS
Trigger: ACTGTCAGTTGGCCCCAGCAATGGAAAAGAACAGAA...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GGTCTTGTCAACAGAATGAGCCAGACCTTGAATAACTCAGACTTTGGGATGGAAGATGCACTGTTAGTTTaGAGTGACACCAGATTCTGG +
Preference number: 5 (lower is better)
Translates to: GLVNRMSQTLNNSDFGMEDALLV*SDTRFW
Trigger: CCAGAATCTGGTGTCACTCAAAACTAACAGTGCATC...TTCCATCCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCTGTTGACAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TGGCCCAAGCAATGCGGTGTTGTGCTTTGGTGTAGAATCAGTACAGCCTTGTTTGACTTTAATTTTCTCTaGGTTCGAGTGCAGAGATTC +
Preference number: 5 (lower is better)
Translates to: WPKQCGVVLWCRISTALFDFNFL*VRVQRF
Trigger: GAATCTCTGCACTCGAACCAAGAGAAAATTAAAGTC...AAACAAGGCTGTACTGATTCTACACCAAAGCACAACACCGCATTGCTTGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACAAGAATGAGCCAGACCTaGAATAACTCAGACTTTGGG +
Preference number: 5 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITRMSQT*NNSDFG
Trigger: CCCAAAGTCTGAGTTATTCAAGGTCTGGCTCATTCT...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 90 bp GTCTTTGGAGCAGTATCTAATGATAGTATTTCAATCATAGAGAACTaGTGGCCAGGATGGAGTGGTCCTCTCCTCTTAGTATGGGAAATC +
Preference number: 5 (lower is better)
Translates to: VFGAVSNDSISIIEN*WPGWSGPLLLVWEI
Trigger: GATTTCCCATACTAAGAGGAGAGGACCACTCCATCCTGGCCAGCAGTTCTCTATGATTGAAATACTATCATTAGATACTGCTCCAAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp GTATCTAATGATAGTATTTCAATCATAGAGAACTGCTGGCCAGGATaGAGTGGTCCTCTCCTCTTAGTATGGGAAATCCTGTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: VSNDSISIIENCWPG*SGPLLLVWEILLAI
Trigger: AATGGCCAACAGGATTTCCCATACTAAGAGGAGAGGACCACTCCATCCTGGCCAGCAGTTCTCTATGATTGAAATACTATCATTAGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 90 bp TTTGGAGCAGTATCTAATGATAGTATTTCAATCATAGAGAACTGCTaGCCAGGATGGAGTGGTCCTCTCCTCTTAGTATGGGAAATCCTG +
Preference number: 5 (lower is better)
Translates to: FGAVSNDSISIIENC*PGWSGPLLLVWEIL
Trigger: CAGGATTTCCCATACTAAGAGGAGAGGACCACTCCATCCTGGCCAGCAGTTCTCTATGATTGAAATACTATCATTAGATACTGCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCAAGAAGCTGGCTGTCTaGAACAAAAAGACAACAAAA +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQAKKLAV*NKKTTK
Trigger: TTTTGTTGTCTTTTTGTTCAAGACAGCCAGCTTCTT...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTCACGCGGTTCTGATCTaGGAAGAAGCTGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSHAVLI*EEAGCL
Trigger: AAGACAGCCAGCTTCTTCCAAGATCAGAACCGCGTG...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp GTGCTCTGCAAAGATTCTAGCTTAGACACTGGATCTTCAGCCAAGGGAATTACATCTCCCCTTAGGTCTTaGGAGCAGTATCTAATGATA +
Preference number: 5 (lower is better)
Translates to: VLCKDSSLDTGSSAKGITSPLRS*EQYLMI
Trigger: TATCATTAGATACTGCTCCAAAGACCTAAGGGGAGA...TGTAATTCCCTTGGCTGAAGATCCAGTGTCTAAGCTAGAATCTTTGCAGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTGAAGATGGTGCCTGGTaGCTTGAGTCTTCCCCATCA +
Preference number: 5 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSEDGAW*LESSPS
Trigger: TGATGGGGAAGACTCAAGCAACCAGGCACCATCTTC...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTTAAAGTTCACACCAAAAACAGATTCCACCCATTTGCCAGGTGGTCTCAGGCCTCGATTAATATATGTTaGAACCTATCTACACGGCTG +
Preference number: 5 (lower is better)
Translates to: LKVHTKNRFHPFARWSQASINIC*NLSTRL
Trigger: CAGCCGTGTAGATAGGTTCAAACATATATTAATCGA...GGCCTGAGACCACCTGGCAAATGGGTGGAATCTGTTTTTGGTGTGAACTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATCTTCCCAGGCTAACTTaGGCCAGTAATCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYLPRLT*ASNPAQ
Trigger: CTGAGCTGGATTACTGGCCAAAGTTAGCCTGGGAAG...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGGGTTCATGTGAGGGCCTCAACTGGAAACATATCTATGACCACATCAGCTTCTTTGTCATCTGAGTaGTCTTTGGGCAAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: LRVHVRASTGNISMTTSASLSSE*SLGKSN
Trigger: ATTGCTTTTGCCCAAAGACAACTCAGATGACAAAGA...AGCTGATGTGGTCATAGATATGTTTCCAGTTGAGGCCCTCACATGAACCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCAAGCAATTGTTGAGATCTaGGCCAGTTCGATAAAAGTT +
Preference number: 5 (lower is better)
Translates to: INFSEENSFPVSGQWPKQAIVEI*ASSIKV
Trigger: AACTTTTATCGAACTGGCCAAGATCTCAACAATTGC...TTGCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCTGCTGAAATCCTCTTaGAATTACACTTATCCAGCA +
Preference number: 5 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSLLKSS*NYTYPA
Trigger: TGCTGGATAAGTGTAATTCAAAGAGGATTTCAGCAG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTGGCAGGTACTGCAATaGTTGAGATCTTGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSWQVLQ*LRSWPV
Trigger: AACTGGCCAAGATCTCAACAATTGCAGTACCTGCCA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp ATATCAATTTTTCAGAAGAGAACTCCTTCCCAGTTTCAGGTCAGTGGCCCAAGCCTCCTGCAATTTAAGTaGATGTATTGGTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: ISIFQKRTPSQFQVSGPSLLQFK*MYWSFS
Trigger: GGAAAAAGACCAATACATCAACTTAAATTGCAGGAG...GCTTGGGCCACTGACCTGAAACTGGGAAGGAGTTCTCTTCTGAAAAATTGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATTCTGGTGATTGTTACTaGATGAAGGACAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYSGDCY*MKDSLR
Trigger: CCTCAGACTGTCCTTCATCAAGTAACAATCACCAGA...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp CTACAGAGAAAGCAGCTACATAAACTCCTGCAATTTAAGTTGATGTATTGGTCTTCAATTAGGCTCAATTaGCAGTGGGGTAGGTACATC +
Preference number: 5 (lower is better)
Translates to: LQRKQLHKLLQFKLMYWSSIRLN*QWGRYI
Trigger: GATGTACCTACCCCACTGCAAATTGAGCCTAATTGA...AGACCAATACATCAACTTAAATTGCAGGAGTTTATGTAGCTGCTTTCTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS-3UTR CAA 90 bp TTAAGAAGGTGCTCTATAGATGAGCTGGTATTAAGTTCCAAGGATAGTGAGTATAGCTTTCTCCAAGTCTaGAATTACATTCAAAAGGAC +
Preference number: 5 (lower is better)
Translates to: LRRCSIDELVLSSKDSEYSFLQV*NYIQKD
Trigger: GTCCTTTTGAATGTAATTCAAGACTTGGAGAAAGCT...ATACTCACTATCCTTGGAACTTAATACCAGCTCATCTATAGAGCACCTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 72 bp ACCATTGCTTTGCACCTTGGGGACCCTTGGGAGGAATaGATGGGACACCTTGACCCTTCGAGGCCCATCCTC +
Preference number: 6 (lower is better)
Translates to: TIALHLGDPWEE*MGHLDPSRPIL
Trigger: GAGGATGGGCCTCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp GGGGATTCAGTGGGCAGAGTCCCTGTTGTGGTGTGTTaGCCGAAGTTCACATGTGGGCACGGTGAGCTACGT +
Preference number: 6 (lower is better)
Translates to: GDSVGRVPVVVC*PKFTCGHGELR
Trigger: ACGTAGCTCACCGTGCCCACATGTGAACTTCGGCCAACACACCACAACAGGGACTCTGCCCACTGAATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS CAA 72 bp CGAGTGCAGAGATTCCTCCACAGATTGCAGTCGGCCTaGGAGGTCGCAGAGTTCACCCCGTGCCAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: RVQRFLHRLQSA*EVAEFTPCQVN
Trigger: ATTCACCTGGCACGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCTGTGGAGGAATCTCTGCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp GCTGGCTGGCTGTGGGAGCCTTGTGAGGGGGAACTGTaGGTCCGTGGAGATGAAGGAACACACGTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: AGWLWEPCEGEL*VRGDEGTHVSF
Trigger: AAAGGAAACGTGTGTTCCTTCATCTCCACGGACTCACAGTTCCCCCTCACAAGGCTCCCACAGCCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 72 bp GGCGAGGAGCACCTGCAGAGGATGGTCCCCCTTCCTTaGACAATGAGCCAGGCTTTGACCAGCAGCAAAATT +
Preference number: 6 (lower is better)
Translates to: GEEHLQRMVPLP*TMSQALTSSKI
Trigger: AATTTTGCTGCTGGTCAAAGCCTGGCTCATTGTGCAAGGAAGGGGGACCATCCTCTGCAGGTGCTCCTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523970.1
CDS CCA 72 bp GAATCACAGGGGATTCAGTGGGCAGAGTCCCTGTTGTaGTGTGTTGGCCGAAGTTCACATGTGGGCACGGTG +
Preference number: 6 (lower is better)
Translates to: ESQGIQWAESLL*CVGRSSHVGTV
Trigger: CACCGTGCCCACATGTGAACTTCGGCCAACACACCACAACAGGGACTCTGCCCACTGAATCCCCTGTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS CCA 72 bp TTGCTTTGCACCTTGGGGACCCTTGGGAGGAATGCATaGGACACCTTGACCCTTCGAGGCCCATCCTCAAGA +
Preference number: 6 (lower is better)
Translates to: LLCTLGTLGRNA*DTLTLRGPSSR
Trigger: TCTTGAGGATGGGCCTCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp GCTAACAGGACCATTGCTTTGCACCTTGGGGACCCTTaGGAGGAATGCATGGGACACCTTGACCCTTCGAGG +
Preference number: 6 (lower is better)
Translates to: ANRTIALHLGDP*EECMGHLDPSR
Trigger: CCTCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp GAGGAATCACAGGGGATTCAGTGGGCAGAGTCCCTGTaGTGGTGTGTTGGCCGAAGTTCACATGTGGGCACG +
Preference number: 6 (lower is better)
Translates to: EESQGIQWAESL*WCVGRSSHVGT
Trigger: CGTGCCCACATGTGAACTTCGGCCAACACACCACAACAGGGACTCTGCCCACTGAATCCCCTGTGATTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS CAA 72 bp TTGGAAACTCCAGTGTGTCTGACTCGGTGGGGTTGTTaGCCGTCTGCTCCTGACACCCAGGGGCAGATTTCG +
Preference number: 6 (lower is better)
Translates to: LETPVCLTRWGC*PSAPDTQGQIS
Trigger: CGAAATCTGCCCCTGGGTGTCAGGAGCAGACGGCAAACAACCCCACCGAGTCAGACACACTGGAGTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp GTGTCTGACTCGGTGGGGTTGTTTGCCGTCTGCTCCTaGCACCCAGGGGCAGATTTCGATGCACTGTTAGTT +
Preference number: 6 (lower is better)
Translates to: VSDSVGLFAVCS*HPGADFDALLV
Trigger: AACTAACAGTGCATCGAAATCTGCCCCTGGGTGTCAGGAGCAGACGGCAAACAACCCCACCGAGTCAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 72 bp GGCCGAAGTTCACATGTGGGCACGGTGAGCTACGTCTaGAGCCTCCATGATGATGTATGTTTGCTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: GRSSHVGTVSYV*SLHDDVCLLGL
Trigger: GAGGCCAAGCAAACATACATCATCATGGAGGCTGCAGACGTAGCTCACCGTGCCCACATGTGAACTTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS GCA 72 bp TTCTCTTGGTTCGAGTGCAGAGATTCCTCCACAGATTaGAGTCGGCCTTGGAGGTCGCAGAGTTCACCCCGT +
Preference number: 6 (lower is better)
Translates to: FSWFECRDSSTD*SRPWRSQSSPR
Trigger: ACGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCTGTGGAGGAATCTCTGCACTCGAACCAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp ACCAAGAGAGCTGGTAGGCGGTTTATCAAGGGAGGCTaGCACGCGGTTCTGATCTTGGAAGAAGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: TKRAGRRFIKGG*HAVLILEEAGC
Trigger: ACAGCCAGCTTCTTCCAAGATCAGAACCGCGTGCCAGCCTCCCTTGATAAACCGCCTACCAGCTCTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp TTTCTCTTGGTTCGAGTGCAGAGATTCCTCCACAGATaGCAGTCGGCCTTGGAGGTCGCAGAGTTCACCCCG +
Preference number: 6 (lower is better)
Translates to: FLLVRVQRFLHR*QSALEVAEFTP
Trigger: CGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCTGTGGAGGAATCTCTGCACTCGAACCAAGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp CTGGACAATTTGGAAACTCCAGTGTGTCTGACTCGGTGGGGTTGTTaGCCGTCTGCTCCTGACACCCAGGGGCAGATTTCGATGCACTGT +
Preference number: 6 (lower is better)
Translates to: LDNLETPVCLTRWGC*PSAPDTQGQISMHC
Trigger: ACAGTGCATCGAAATCTGCCCCTGGGTGTCAGGAGCAGACGGCAAACAACCCCACCGAGTCAGACACACTGGAGTTTCCAAATTGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp GCTAGGCCAGTTGGATTCTTAGTGGTCCCATCTTCCTaGAATCTCACCTGCTGGGATTTGCTCCTGCGGTGG +
Preference number: 6 (lower is better)
Translates to: ARPVGFLVVPSS*NLTCWDLLLRW
Trigger: CCACCGCAGGAGCAAATCCCAGCAGGTGAGATTCAAGGAAGATGGGACCACTAAGAATCCAACTGGCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp CACAATGTCCTGTTCAGAGAGGTTACCGTTGACCTGGATGGCACTTaGGGAGGCTGTTGGCATTTCCACCAGGGACTTACTGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: HNVLFREVTVDLDGT*GGCWHFHQGLTGCE
Trigger: CTCACAGCCAGTAAGTCCCTGGTGGAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTGAACAGGACATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp GTTCCTGCTTCCAAGCATATGCTAACAGGACCATTGCTTTGCACCTaGGGGACCCTTGGGAGGAATGCATGGGACACCTTGACCCTTCGA +
Preference number: 6 (lower is better)
Translates to: VPASKHMLTGPLLCT*GTLGRNAWDTLTLR
Trigger: TCGAAGGGTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTTGGAAGCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp CCTCCAAGTTCCTGCTTCCAAGCATATGCTAACAGGACCATTGCTTaGCACCTTGGGGACCCTTGGGAGGAATGCATGGGACACCTTGAC +
Preference number: 6 (lower is better)
Translates to: PPSSCFQAYANRTIA*HLGDPWEECMGHLD
Trigger: GTCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTTGGAAGCAGGAACTTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp AAGGACCTCCAAGTTCCTGCTTCCAAGCATATGCTAACAGGACCATaGCTTTGCACCTTGGGGACCCTTGGGAGGAATGCATGGGACACC +
Preference number: 6 (lower is better)
Translates to: KDLQVPASKHMLTGP*LCTLGTLGRNAWDT
Trigger: GGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTTGGAAGCAGGAACTTGGAGGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp GACTTTAATTTTCTCTTGGTTCGAGTGCAGAGATTCCTCCACAGATaGCAGTCGGCCTTGGAGGTCGCAGAGTTCACCCCGTGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: DFNFLLVRVQRFLHR*QSALEVAEFTPCQV
Trigger: CACCTGGCACGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCTGTGGAGGAATCTCTGCACTCGAACCAAGAGAAAATTAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp TGTGGTGTGTTGGCCGAAGTTCACATGTGGGCACGGTaGGCTACGTCTGCAGCCTCCATGATGATGTATGTT +
Preference number: 6 (lower is better)
Translates to: CGVLAEVHMWAR*ATSAASMMMYV
Trigger: AACATACATCATCATGGAGGCTGCAGACGTAGCTCACCGTGCCCACATGTGAACTTCGGCCAACACACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1
CDS CCA 72 bp TGTTCAGAGAGGTTACCGTTGACCTGGATGGCACTTTaGGAGGCTGTTGGCATTTCCACCAGGGACTTACTG +
Preference number: 6 (lower is better)
Translates to: CSERLPLTWMAL*EAVGISTRDLL
Trigger: CAGTAAGTCCCTGGTGGAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp GACACAATGTCCTGTTCAGAGAGGTTACCGTTGACCTaGATGGCACTTTGGGAGGCTGTTGGCATTTCCACC +
Preference number: 6 (lower is better)
Translates to: DTMSCSERLPLT*MALWEAVGIST
Trigger: GGTGGAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTGAACAGGACATTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp AGCAATTCAGGTTTAAGTTCCTCTGTGCCTGGTGTGTaGCTGGCAACGCTGGTGGCATTTAAGCAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: SNSGLSSSVPGV*LATLVAFKQEV
Trigger: CACCTCCTGCTTAAATGCCACCAGCGTTGCCAGCCACACACCAGGCACAGAGGAACTTAAACCTGAATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp CTGTTCAGAGAGGTTACCGTTGACCTGGATGGCACTTaGGGAGGCTGTTGGCATTTCCACCAGGGACTTACT +
Preference number: 6 (lower is better)
Translates to: LFREVTVDLDGT*GGCWHFHQGLT
Trigger: AGTAAGTCCCTGGTGGAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp TCCTGCTTCCAAGCATATGCTAACAGGACCATTGCTTaGCACCTTGGGGACCCTTGGGAGGAATGCATGGGA +
Preference number: 6 (lower is better)
Translates to: SCFQAYANRTIA*HLGDPWEECMG
Trigger: TCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTTGGAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp CTCTTGGTTCGAGTGCAGAGATTCCTCCACAGATTGCAGTCGGCCTaGGAGGTCGCAGAGTTCACCCCGTGCCAGGTGAATTTGATTAAT +
Preference number: 6 (lower is better)
Translates to: LLVRVQRFLHRLQSA*EVAEFTPCQVNLIN
Trigger: ATTAATCAAATTCACCTGGCACGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCTGTGGAGGAATCTCTGCACTCGAACCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp CAGTCGGCCTTGGAGGTCGCAGAGTTCACCCCGTGCCAGGTGAATTaGATTAATGTCACTAATCTCCCTGTTGCTCTGAAGTTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: QSALEVAEFTPCQVN*INVTNLPVALKFGL
Trigger: GAGACCAAACTTCAGAGCAACAGGGAGATTAGTGACATTAATCAAATTCACCTGGCACGGGGTGAACTCTGCGACCTCCAAGGCCGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp TATGATGCACGCCGTGTTCTGGCAGGTACTGCAATTGTTGAGATCTaGGCCAGTTCGATAAAAGTTGCGCCCTTCAGTGAGAGCTCGAGC +
Preference number: 6 (lower is better)
Translates to: YDARRVLAGTAIVEI*ASSIKVAPFSESSS
Trigger: GCTCGAGCTCTCACTGAAGGGCGCAACTTTTATCGAACTGGCCAAGATCTCAACAATTGCAGTACCTGCCAGAACACGGCGTGCATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp GTAGGCGGTTTATCAAGGGAGGCTGGCACGCGGTTCTaGTCTTGGAAGAAGCTGGCTGTCTTGAACAAAAAG +
Preference number: 6 (lower is better)
Translates to: VGGLSREAGTRF*SWKKLAVLNKK
Trigger: CTTTTTGTTCAAGACAGCCAGCTTCTTCCAAGATCAGAACCGCGTGCCAGCCTCCCTTGATAAACCGCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 72 bp CAGTGGAATTACCTGCAGAGGATGGTCCCCCTTCCTTaGACAATGAGCCAGGCTTTGACCAGCAGCAAAATT +
Preference number: 6 (lower is better)
Translates to: QWNYLQRMVPLP*TMSQALTSSKI
Trigger: AATTTTGCTGCTGGTCAAAGCCTGGCTCATTGTGCAAGGAAGGGGGACCATCCTCTGCAGGTAATTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 72 bp TTGCAGTCGGCCTTGGAGGTCGCAGAGTTCACCCCGTaGCAGGTGAATTTGATTAATGTCACTAATCTCCCT +
Preference number: 6 (lower is better)
Translates to: LQSALEVAEFTP*QVNLINVTNLP
Trigger: AGGGAGATTAGTGACATTAATCAAATTCACCTGGCACGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp GTTCCTCTGTGCCTGGTGTGTGGCTGGCAACGCTGGTaGCATTTAAGCAGGAGGTGGATTTTTCTGAATCTA +
Preference number: 6 (lower is better)
Translates to: VPLCLVCGWQRW*HLSRRWIFLNL
Trigger: TAGATTCAGAAAAATCCACCTCCTGCTTAAATGCCACCAGCGTTGCCAGCCACACACCAGGCACAGAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp CAAGTTCCTGCTTCCAAGCATATGCTAACAGGACCATaGCTTTGCACCTTGGGGACCCTTGGGAGGAATGCA +
Preference number: 6 (lower is better)
Translates to: QVPASKHMLTGP*LCTLGTLGRNA
Trigger: TGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTTGGAAGCAGGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp CGCCGTGTTCTGGCAGGTACTGCAATTGTTGAGATCTaGGCCAGTTCGATAAAAGTTGCGCCCTTCAGTGAG +
Preference number: 6 (lower is better)
Translates to: RRVLAGTAIVEI*ASSIKVAPFSE
Trigger: CTCACTGAAGGGCGCAACTTTTATCGAACTGGCCAAGATCTCAACAATTGCAGTACCTGCCAGAACACGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp ATTACTTCCTGGACAATTTGGAAACTCCAGTGTGTCTaGCTCGGTGGGGTTGTTTGCCGTCTGCTCCTGACA +
Preference number: 6 (lower is better)
Translates to: ITSWTIWKLQCV*LGGVVCRLLLT
Trigger: TGTCAGGAGCAGACGGCAAACAACCCCACCGAGTCAGACACACTGGAGTTTCCAAATTGTCCAGGAAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp CTCACTTTCATATTTTGCTGGGCCATTGAGCCTCAGTaGGAAGGATCAGGACCATACACTTCTCCTAGGCAC +
Preference number: 6 (lower is better)
Translates to: LTFIFCWAIEPQ*EGSGPYTSPRH
Trigger: GTGCCTAGGAGAAGTGTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp CGGTTTATCAAGGGAGGCTGGCACGCGGTTCTGATCTaGGAAGAAGCTGGCTGTCTTGAACAAAAAGACAAC +
Preference number: 6 (lower is better)
Translates to: RFIKGGWHAVLI*EEAGCLEQKDN
Trigger: GTTGTCTTTTTGTTCAAGACAGCCAGCTTCTTCCAAGATCAGAACCGCGTGCCAGCCTCCCTTGATAAACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp TACGCTTTAGAAGCACAGGTCTCACTTTCATATTTTGCTGGGCCATaGAGCCTCAGTGGGAAGGATCAGGACCATACACTTCTCCTAGGC +
Preference number: 6 (lower is better)
Translates to: YALEAQVSLSYFAGP*SLSGKDQDHTLLLG
Trigger: GCCTAGGAGAAGTGTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAGACCTGTGCTTCTAAAGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp AGGGGGAACTGTGAGTCCGTGGAGATGAAGGAACACACGTTTCCTTaGACTGAGATGACAGTGAGCCAAGGTCTTTGTCATCTGAGTTGT +
Preference number: 6 (lower is better)
Translates to: RGNCESVEMKEHTFP*TEMTVSQGLCHLSC
Trigger: ACAACTCAGATGACAAAGACCTTGGCTCACTGTCATCTCAGTCAAAGGAAACGTGTGTTCCTTCATCTCCACGGACTCACAGTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp AAGCACAGGTCTCACTTTCATATTTTGCTGGGCCATTaGGCCTCAGTGGGAAGGATCAGGACCATACACTTC +
Preference number: 6 (lower is better)
Translates to: KHRSHFHILLGH*ASVGRIRTIHF
Trigger: GAAGTGTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAGACCTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp TTGAATCTCACCTGCTGGGATTTGCTCCTGCGGTGGTaGGGTTGTTTCACAAACTCCACTGATTCTAGACTG +
Preference number: 6 (lower is better)
Translates to: LNLTCWDLLLRW*GCFTNSTDSRL
Trigger: CAGTCTAGAATCAGTGGAGTTTGTGAAACAACCTCACCACCGCAGGAGCAAATCCCAGCAGGTGAGATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp GTCCGTGGAGATGAAGGAACACACGTTTCCTTTGACTaGGATGACAGTGAGCCAAGGTCTTTGTCATCTGAG +
Preference number: 6 (lower is better)
Translates to: VRGDEGTHVSFD*DDSEPRSLSSE
Trigger: CTCAGATGACAAAGACCTTGGCTCACTGTCATCTCAGTCAAAGGAAACGTGTGTTCCTTCATCTCCACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp GAAGCACAGGTCTCACTTTCATATTTTGCTGGGCCATaGAGCCTCAGTGGGAAGGATCAGGACCATACACTT +
Preference number: 6 (lower is better)
Translates to: EAQVSLSYFAGP*SLSGKDQDHTL
Trigger: AAGTGTATGGTCCTGATCCTTCCCACTGAGGCTCAATGGCCCAGCAAAATATGAAAGTGAGACCTGTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp TTGGAGGTCGCAGAGTTCACCCCGTGCCAGGTGAATTaGATTAATGTCACTAATCTCCCTGTTGCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: LEVAEFTPCQVN*INVTNLPVALK
Trigger: CTTCAGAGCAACAGGGAGATTAGTGACATTAATCAAATTCACCTGGCACGGGGTGAACTCTGCGACCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp TATTTCAATCATAGAGAACTGCTGGCCAGGATGGAGTaGTCCTCTCCTCTTAGTATGGGAAATCCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: YFNHRELLARME*SSPLSMGNPVG
Trigger: GCCAACAGGATTTCCCATACTAAGAGGAGAGGACCACTCCATCCTGGCCAGCAGTTCTCTATGATTGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 72 bp TGTGAGTCCGTGGAGATGAAGGAACACACGTTTCCTTaGACTGAGATGACAGTGAGCCAAGGTCTTTGTCAT +
Preference number: 6 (lower is better)
Translates to: CESVEMKEHTFP*TEMTVSQGLCH
Trigger: ATGACAAAGACCTTGGCTCACTGTCATCTCAGTCAAAGGAAACGTGTGTTCCTTCATCTCCACGGACTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp GATAGTATTTCAATCATAGAGAACTGCTGGCCAGGATaGAGTGGTCCTCTCCTCTTAGTATGGGAAATCCTG +
Preference number: 6 (lower is better)
Translates to: DSISIIENCWPG*SGPLLLVWEIL
Trigger: CAGGATTTCCCATACTAAGAGGAGAGGACCACTCCATCCTGGCCAGCAGTTCTCTATGATTGAAATACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CCA 72 bp TCATACTCTACACTGTATATGATGCACGCCGTGTTCTaGCAGGTACTGCAATTGTTGAGATCTTGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: SYSTLYMMHAVF*QVLQLLRSWPV
Trigger: AACTGGCCAAGATCTCAACAATTGCAGTACCTGCCAGAACACGGCGTGCATCATATACAGTGTAGAGTATGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp AGTTTGGTCTCACTCCTTGAAAGAGAGGATGGGAGATaGTTACTTCCTGGACAATTTGGAAACTCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SLVSLLEREDGR*LLPGQFGNSSV
Trigger: CACACTGGAGTTTCCAAATTGTCCAGGAAGTAATCATCTCCCATCCTCTCTTTCAAGGAGTGAGACCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 72 bp AGACTCTGCAAAACTTCATGGAACCTGCCTTCCTGCTaGCGAAAATCATACTCTACACTGTATATGATGCAC +
Preference number: 6 (lower is better)
Translates to: RLCKTSWNLPSC*RKSYSTLYMMH
Trigger: GTGCATCATATACAGTGTAGAGTATGATTTTCGGCAGCAGGAAGGCAGGTTCCATGAAGTTTTGCAGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS GCA 72 bp TCCAGACTCTGCAAAACTTCATGGAACCTGCCTTCCTaGTGCCGAAAATCATACTCTACACTGTATATGATG +
Preference number: 6 (lower is better)
Translates to: SRLCKTSWNLPS*CRKSYSTLYMM
Trigger: CATCATATACAGTGTAGAGTATGATTTTCGGCAGCAGGAAGGCAGGTTCCATGAAGTTTTGCAGAGTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS CAA 90 bp AGTGAATTCCAAAAGAAACCTGCTACGTCTAGAACATACAGCTTTTaGTTTCCCAGAGCATTAATTTCCAGGGTGAAACTGCAGGAAACT +
Preference number: 6 (lower is better)
Translates to: SEFQKKPATSRTYSF*FPRALISRVKLQET
Trigger: AGTTTCCTGCAGTTTCACCCTGGAAATTAATGCTCTGGGAAACAAAAAGCTGTATGTTCTAGACGTAGCAGGTTTCTTTTGGAATTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377365.4
CDS TCA 72 bp ATAAATGACCTGGAGGTTTGCTTGTTTGATGATACATaGTGCTCCCAAGGGAACATTCCCATTTATGTCAAT +
Preference number: 6 (lower is better)
Translates to: INDLEVCLFDDT*CSQGNIPIYVN
Trigger: ATTGACATAAATGGGAATGTTCCCTTGGGAGCATCATGTATCATCAAACAAGCAAACCTCCAGGTCATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377365.4
ENST00000523970.1