RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INSYN2A (Homo sapiens)

Ensembl gene IDs: ENSG00000188916

Ensembl transcript IDs: ENST00000424811.2, ENST00000522781.6, ENST00000614311.4

Found 479 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTGGTACAAAGGCCTTTTTGGTACGCAGGGCGAGAAGTGGGAGGTaGCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGA +
Preference number: 1 (lower is better)
Translates to: IGTKAFLVRRARSGR*LNGHHSSLDPIHFG
Trigger: TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CCA 90 bp ATTATCTATTGGTACAAAGGCCTTTTTGGTACGCAGGGCGAGAAGTaGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCA +
Preference number: 1 (lower is better)
Translates to: IIYWYKGLFGTQGEK*EVPEWAPQFPRSYS
Trigger: TGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACCAATAGATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR TCA 90 bp GGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTaGTTTATTGGTGGGTGGATTATCCATCGTGTATCTCTATGTATG +
Preference number: 1 (lower is better)
Translates to: GSIHKNTVCHGTECL*FIGGWIIHRVSLCM
Trigger: CATACATAGAGATACACGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CCA 90 bp CCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTaGTGGGTGGATTATCCATCGTGTATCTCTATGTATGTTCTCAGA +
Preference number: 1 (lower is better)
Translates to: PQKHCLPWHRMPVIY*WVDYPSCISMYVLR
Trigger: TCTGAGAACATACATAGAGATACACGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CCA 90 bp CAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTaGGTGGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTC +
Preference number: 1 (lower is better)
Translates to: QKHCLPWHRMPVIYW*VDYPSCISMYVLRF
Trigger: GAATCTGAGAACATACATAGAGATACACGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGACGCAGGGCGAGAAGTaGGAGGTGCCTGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSTQGEK*EVPEWA
Trigger: TGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGT...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR GCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGGCGAGAAGTGGGAGGTaGCTGAATGGGCACCACAGT +
Preference number: 2 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEARSGR*LNGHHS
Trigger: ACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGC...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGAAGTGGGAGGTGCCTaGATGGGCACCACAGTTCCC +
Preference number: 2 (lower is better)
Translates to: RASTINTKHNELYITSGCEVGGA*MGTTVP
Trigger: GGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCACGCAGGGCGAGAAGTaGGAGGTGCCTGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: RASTINTKHNELYITSGCTQGEK*EVPEWA
Trigger: TGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR GCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCCCCACATCAGTGAACTaGAAAGAACAGCTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSPTSVN*KEQLAR
Trigger: CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGG...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGAAGTGGGAGGTGCCTaGATGGGCACCACAGTTCCC +
Preference number: 2 (lower is better)
Translates to: VCSQILARMYYLAFGYQKEVGGA*MGTTVP
Trigger: GGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGTACATCCCACATCAGTaGACTGCAAAGAACAGCTGG +
Preference number: 2 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEYIPHQ*TAKNSW
Trigger: CCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTA...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGATTAAAGGCATATCCTaGCTTTGGGGGACTCCTGGC +
Preference number: 2 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWIKGIS*LWGTPG
Trigger: GCCAGGAGTCCCCCAAAGTCAGGATATGCCTTTAAT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCCCACATCAGTGAACTaGAAAGAACAGCTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWPTSVN*KEQLAR
Trigger: CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CAA 90 bp CTGGCAAGGAGTGACACAGAATACCTTGCTTCTGTTAATTATCTATaGGTACAAAGGCCTTTTTGGTACGCAGGGCGAGAAGTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LARSDTEYLASVNYL*VQRPFWYAGREVGG
Trigger: ACCTCCCACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACCAATAGATAATTAACAGAAGCAAGGTATTCTGTGTCACTCCTTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATACGCAGGGCGAGAAGTaGGAGGTGCCTGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: GLSIVYLYVCSQILARMYTQGEK*EVPEWA
Trigger: TGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCACTTTGGGGGACTCCTaGCTGCTGGCCATTTGGAAA +
Preference number: 2 (lower is better)
Translates to: RASTINTKHNELYITSGCTLGDS*LLAIWK
Trigger: TTTCCAAATGGCCAGCAGCCAGGAGTCCCCCAAAGT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCGCTTTCTCCGGAATTTaGTGTGCTGAAAATTGCACT +
Preference number: 2 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSAFSGI*CAENCT
Trigger: AGTGCAATTTTCAGCACATCAAATTCCGGAGAAAGC...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGGCTTTCTCCGGAATTTaGTGTGCTGAAAATTGCACT +
Preference number: 2 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEAFSGI*CAENCT
Trigger: AGTGCAATTTTCAGCACATCAAATTCCGGAGAAAGC...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATGGTCTCCGACCACTTaGAAAAATTGTGCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLWSPTT*KNCAFS
Trigger: GGAGAAAGCACAATTTTTTCAAGTGGTCGGAGACCA...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTACCTGTCTACTTGCAGTaGTTAAAGGCATATCCTGAC +
Preference number: 2 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLPVYLQ*LKAYPD
Trigger: GTCAGGATATGCCTTTAATCACTGCAAGTAGACAGG...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCCTGTCTACTTGCAGTaGTTAAAGGCATATCCTGAC +
Preference number: 2 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWPVYLQ*LKAYPD
Trigger: GTCAGGATATGCCTTTAATCACTGCAAGTAGACAGG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR GCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGCGAGAAGTGGGAGGTaGCTGAATGGGCACCACAGT +
Preference number: 2 (lower is better)
Translates to: GLSIVYLYVCSQILARMYARSGR*LNGHHS
Trigger: ACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGAGGTGCCTGAATaGGCACCACAGTTCCCTCGA +
Preference number: 2 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLWEVPE*APQFPR
Trigger: TCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCA...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGGCACAGAATGCCTGTaGTTTATTGGTGGGTGGATT +
Preference number: 2 (lower is better)
Translates to: RASTINTKHNELYITSGCGTECL*FIGGWI
Trigger: AATCCACCCACCAATAAATCACAGGCATTCTGTGCC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAGCGAGAAGTGGGAGGTaGCTGAATGGGCACCACAGT +
Preference number: 2 (lower is better)
Translates to: FDYVSFISDFTSHISELQARSGR*LNGHHS
Trigger: ACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGC...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGACTTTGGGGGACTCCTaGCTGCTGGCCATTTGGAAA +
Preference number: 2 (lower is better)
Translates to: VCSQILARMYYLAFGYQKTLGDS*LLAIWK
Trigger: TTTCCAAATGGCCAGCAGCCAGGAGTCCCCCAAAGT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CAA 90 bp TCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATaGGTGGGTGGATTATCCATCGTGTATCTCTATGTATGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: STKTLSAMAQNACDL*VGGLSIVYLYVCSQ
Trigger: CTGAGAACATACATAGAGATACACGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGCGGAATTTGATGTGCTaGAAATTGCACTCGCCCCCT +
Preference number: 2 (lower is better)
Translates to: VCSQILARMYYLAFGYQKRNLMC*KLHSPP
Trigger: AGGGGGCGAGTGCAATTTTCAGCACATCAAATTCCG...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCTGGTCTCCGACCACTTaGAAAAATTGTGCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: RASTINTKHNELYITSGCWSPTT*KNCAFS
Trigger: GGAGAAAGCACAATTTTTTCAAGTGGTCGGAGACCA...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAGGCATATCCTaGCTTTGGGGGACTCCTGGC +
Preference number: 2 (lower is better)
Translates to: VCSQILARMYYLAFGYQKIKGIS*LWGTPG
Trigger: GCCAGGAGTCCCCCAAAGTCAGGATATGCCTTTAAT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCATGCCTGTGATTTATTaGTGGGTGGATTATCCATCG +
Preference number: 2 (lower is better)
Translates to: RASTINTKHNELYITSGCMPVIY*WVDYPS
Trigger: CGATGGATAATCCACCCACCAATAAATCACAGGCAT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTACATCCCACATCAGTaGACTGCAAAGAACAGCTGG +
Preference number: 2 (lower is better)
Translates to: GLSIVYLYVCSQILARMYYIPHQ*TAKNSW
Trigger: CCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTA...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTGTGACACTGAGATGTaGTCACTTGGCTTAGCGCTA +
Preference number: 2 (lower is better)
Translates to: GLSIVYLYVCSQILARMYCDTEM*SLGLAL
Trigger: TAGCGCTAAGCCAAGTGACCACATCTCAGTGTCACA...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCCCAGAATGTATTATTTaGCCTTTGGGTACCAAAAGA +
Preference number: 2 (lower is better)
Translates to: RASTINTKHNELYITSGCPECII*PLGTKR
Trigger: TCTTTTGGTACCCAAAGGCCAAATAATACATTCTGG...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCACTGCAAAGAACAGCTaGCAAGGAGTGACACAGAAT +
Preference number: 2 (lower is better)
Translates to: LARMYYLAFGYQKIKNEITAKNS*QGVTQN
Trigger: ATTCTGTGTCACTCCTTGCCAGCTGTTCTTTGCAGT...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGCTTTCTCCGGAATTTaGTGTGCTGAAAATTGCACT +
Preference number: 2 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIAFSGI*CAENCT
Trigger: AGTGCAATTTTCAGCACATCAAATTCCGGAGAAAGC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CAA 90 bp TGGGTGGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTaGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAA +
Preference number: 2 (lower is better)
Translates to: WVDYPSCISMYVLRF*PECIIWPLGTKRLK
Trigger: TTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCCACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CCA 72 bp TGGTACAAAGGCCTTTTTGGTACGCAGGGCGAGAAGTaGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGA +
Preference number: 3 (lower is better)
Translates to: WYKGLFGTQGEK*EVPEWAPQFPR
Trigger: TCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR GCA 72 bp AAGGCCTTTTTGGTACGCAGGGCGAGAAGTGGGAGGTaGCTGAATGGGCACCACAGTTCCCTCGATCCTATT +
Preference number: 3 (lower is better)
Translates to: KAFLVRRARSGR*LNGHHSSLDPI
Trigger: AATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGTACCAAAAAGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CCA 72 bp TTTGGTACGCAGGGCGAGAAGTGGGAGGTGCCTGAATaGGCACCACAGTTCCCTCGATCCTATTCATTTTGG +
Preference number: 3 (lower is better)
Translates to: FGTQGEKWEVPE*APQFPRSYSFW
Trigger: CCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGTACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCAGGCATATCCTGACTTaGGGGGACTCCTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSRHILT*GDSWLL
Trigger: CAGCAGCCAGGAGTCCCCCAAAGTCAGGATATGCCT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAAGGCATATCCTGACTTaGGGGGACTCCTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLRHILT*GDSWLL
Trigger: CAGCAGCCAGGAGTCCCCCAAAGTCAGGATATGCCT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGGGTACAAAGGCCTTTTaGGTACGCAGGGCGAGAAGT +
Preference number: 3 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEGTKAF*VRRARS
Trigger: ACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACC...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGGTACAAAGGCCTTTTaGGTACGCAGGGCGAGAAGT +
Preference number: 3 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWGTKAF*VRRARS
Trigger: ACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR TCA 72 bp TTAGTGTCCAATAGCTCTGACCCTGTCTACTTGCAGTaGTTAAAGGCATATCCTGACTTTGGGGGACTCCTG +
Preference number: 3 (lower is better)
Translates to: LVSNSSDPVYLQ*LKAYPDFGGLL
Trigger: CAGGAGTCCCCCAAAGTCAGGATATGCCTTTAATCACTGCAAGTAGACAGGGTCAGAGCTATTGGACACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCTGCCATCTCGCAGGTaGATAATGTATTACTTGCAG +
Preference number: 3 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWLPSRR*IMYYLQ
Trigger: CTGCAAGTAATACATTATCAACCTGCGAGATGGCAG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCAAGAGGATGCTAAATTaGAGGTGTCGTTGTGACACT +
Preference number: 3 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSKRMLN*RCRCDT
Trigger: AGTGTCACAACGACACCTCAAATTTAGCATCCTCTT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTAGGCATATCCTGACTTaGGGGGACTCCTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SCISMYVLRFLPECIIWPRHILT*GDSWLL
Trigger: CAGCAGCCAGGAGTCCCCCAAAGTCAGGATATGCCT...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGGCCAGAATGTATTATTaGGCCTTTGGGTACCAAAAG +
Preference number: 3 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSARMYY*AFGYQK
Trigger: CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGC...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR TCA 72 bp CACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTaGTTTATTGGTGGGTGGATTATCCATCGTGTATCT +
Preference number: 3 (lower is better)
Translates to: HKNTVCHGTECL*FIGGWIIHRVS
Trigger: AGATACACGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGGTACAAAGGCCTTTTaGGTACGCAGGGCGAGAAGT +
Preference number: 3 (lower is better)
Translates to: GLSIVYLYVCSQILARMYGTKAF*VRRARS
Trigger: ACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCCTGCCATCTCGCAGGTaGATAATGTATTACTTGCAG +
Preference number: 3 (lower is better)
Translates to: RASTINTKHNELYITSGCLPSRR*IMYYLQ
Trigger: CTGCAAGTAATACATTATCAACCTGCGAGATGGCAG...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCAAGAGGATGCTAAATTaGAGGTGTCGTTGTGACACT +
Preference number: 3 (lower is better)
Translates to: RASTINTKHNELYITSGCKRMLN*RCRCDT
Trigger: AGTGTCACAACGACACCTCAAATTTAGCATCCTCTT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGCCAGAATGTATTATTaGGCCTTTGGGTACCAAAAG +
Preference number: 3 (lower is better)
Translates to: RASTINTKHNELYITSGCARMYY*AFGYQK
Trigger: CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCAATGCCTGTGATTTATaGGTGGGTGGATTATCCATC +
Preference number: 3 (lower is better)
Translates to: RASTINTKHNELYITSGCNACDL*VGGLSI
Trigger: GATGGATAATCCACCCACCAATAAATCACAGGCATT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR GCA 72 bp GTTTCATTTCAGATTTTACATCCCACATCAGTGAACTaGAAAGAACAGCTGGCAAGGAGTGACACAGAATAC +
Preference number: 3 (lower is better)
Translates to: VSFQILHPTSVN*KEQLARSDTEY
Trigger: GTATTCTGTGTCACTCCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGATAATGTATTACTaGCAGATCGGGGGTGGGGGA +
Preference number: 3 (lower is better)
Translates to: SCISMYVLRFLPECIIWPLIMYY*QIGGGG
Trigger: TCCCCCACCCCCGATCTGCAAGTAATACATTATCAA...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTTGATAATGTATTACTaGCAGATCGGGGGTGGGGGA +
Preference number: 3 (lower is better)
Translates to: LARMYYLAFGYQKIKNEILIMYY*QIGGGG
Trigger: TCCCCCACCCCCGATCTGCAAGTAATACATTATCAA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTCTGCCATCTCGCAGGTaGATAATGTATTACTTGCAG +
Preference number: 3 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLLPSRR*IMYYLQ
Trigger: CTGCAAGTAATACATTATCAACCTGCGAGATGGCAG...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR GCA 72 bp ATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTaGCAGAATGTATTATTTGGCCTTTGGGTACCAAAA +
Preference number: 3 (lower is better)
Translates to: IHRVSLCMFSDS*QNVLFGLWVPK
Trigger: TTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGTCGGCTCCGGGGACTTaGCCCGCTGCGCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSSAPGT*PAARLL
Trigger: CAGCAGGCGCGCAGCGGGCCAAGTCCCCGGAGCCGA...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCCGGGGGCCCTGGCACTaGGGGCAGGTGCGTAAACGG +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSRGPWH*GQVRKR
Trigger: CCGTTTACGCACCTGCCCTCAGTGCCAGGGCCCCCG...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGGCCTCCCCCGGTCCTaGTTGGCCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWGLPRS*LALPSS
Trigger: GCTGCTCGGGAGGGCCAAGCAGGACCGGGGGAGGCC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGATCGGGCATGTCTCGCTaGGGACCCTGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGSGMSR*GPWQAW
Trigger: CCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGA...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGGGCTCCTCGGAGTTTaGCCTCCCCCGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGGLLGV*PPPVLL
Trigger: AAGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTCTCGCTGCGGACCCTaGCAAGCCTGGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSSRCGP*QAWGGT
Trigger: CGTGCCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGGTCGATGCAGCGCCTaGCTCGGGCATGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGGRCSA*LGHVSL
Trigger: CAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCGGCGGCTGCAGAGTCTaGCAAACCAGGCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSGGCRV*QTRLGG
Trigger: GCCCCCGAGCCTGGTTTGTCAGACTCTGCAGCCGCC...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCTGCCGGGCAGAGTaGCCACTGGCTGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSICRAE*PLAGGC
Trigger: GCAGCCGCCAGCCAGTGGTCACTCTGCCCGGCAGAT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGTCCCCCGGTCCTGCTTaGCCCTCCCGAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSSPGPA*PSRAAG
Trigger: ACCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGA...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGCTGTGGGACTAGGCTaGTTCCCCAGCCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWAVGLG*FPSPGG
Trigger: CCCGCCGGGGCTGGGGAACCAGCCTAGTCCCACAGC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAATCTGCCGGGCAGAGTaGCCACTGGCTGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLICRAE*PLAGGC
Trigger: GCAGCCGCCAGCCAGTGGTCACTCTGCCCGGCAGAT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCGCACTGCATCGGGGGTaGGCAGGCCAGGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSALHRG*AGQGSF
Trigger: GAAACTGCCCTGGCCTGCTCACCCCCGATGCAGTGC...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGGCACTGCATCGGGGGTaGGCAGGCCAGGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSALHRG*AGQGSF
Trigger: GAAACTGCCCTGGCCTGCTCACCCCCGATGCAGTGC...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGGGGGAGAGTTGGCCGTaGTCCTGGGTGGGAACCGTG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEGESWP*SWVGTV
Trigger: CACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCC...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTCGGGCATGTCTCGCTaGGGACCCTGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSSGMSR*GPWQAW
Trigger: CCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTGCAGGACACGGGCTTaGCCTCCCGCTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSCRTRA*PPASPP
Trigger: TGGGGGAGAAGCGGGAGGCCAAGCCCGTGTCCTGCA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCCCTCCTGAGGGCAGGTaGAGCGGGCTCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSPPEGR*SGLLGV
Trigger: AACTCCGAGGAGCCCGCTCCACCTGCCCTCAGGAGG...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGCGCCTGTGCTCTTGGTaGCGTTGGGGATGGACCTGC +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSRLCSW*RWGWTC
Trigger: GCAGGTCCATCCCCAACGTCACCAAGAGCACAGGCG...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGCGCCTGGAGCCCGTTaGGATGTGTGGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWAPGAR*DVWLSS
Trigger: GGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGCGCCTGGAGCCCGTTaGGATGTGTGGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLAPGAR*DVWLSS
Trigger: GGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGCCTGGGTGGGAACCGTaGAGGAGAAGTCGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEPGWEP*RRSRRG
Trigger: CCCTCGACGACTTCTCCTTCACGGTTCCCACCCAGG...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGAGGTCGGGCGAGGTCTaGACGCCTGTGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLERSGEV*TPVLLV
Trigger: CACCAAGAGCACAGGCGTGCAGACCTCGCCCGACCT...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGAGGTCGGGCGAGGTCTaGACGCCTGTGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSRSGEV*TPVLLV
Trigger: CACCAAGAGCACAGGCGTGCAGACCTCGCCCGACCT...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCAAGGCTGTGGTCTTGTaGACCCGCCCCGCGCCACAT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSKAVVL*TRPAPH
Trigger: ATGTGGCGCGGGGCGGGTGCACAAGACCACAGCCTT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATTCCGGGGGAGAGTTaGCCGTGCTCCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSIPGES*PCSWVG
Trigger: TCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAAT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGGCCGGGCCTCCTCCATaGGTCCAGCCTCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSAGPPP*VQPRSS
Trigger: AGAAGAACGAGGCTGGACCCATGGAGGAGGCCCGGC...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGACGGATGGAGGCCGAGTaGAGTTTTGGAGCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGRMEAE*SFGAQL
Trigger: AAGCTGCGCTCCAAAACTCCACTCGGCCTCCATCCG...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCCTCCTGAGGGCAGGTaGAGCGGGCTCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWPPEGR*SGLLGV
Trigger: AACTCCGAGGAGCCCGCTCCACCTGCCCTCAGGAGG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGCTGTGGGACTAGGCTaGTTCCCCAGCCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCAVGLG*FPSPGG
Trigger: CCCGCCGGGGCTGGGGAACCAGCCTAGTCCCACAGC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGATGGGAGGTGCCTGAATaGGCACCACAGTTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGWEVPE*APQFPR
Trigger: TCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCA...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGGGACCCTGGCAAGCCTaGGGCGGCACGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARGPWQA*GGTEHS
Trigger: GGAGTGCTCCGTGCCGCCCCAGGCTTGCCAGGGTCC...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGGTCGATGCAGCGCCTaGCTCGGGCATGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWGRCSA*LGHVSL
Trigger: CAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
3UTR CAA 72 bp AGCTGTGTACAGGGTGACAGCCTGCCATCTCGCAGGTaGATAATGTATTACTTGCAGATCGGGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SCVQGDSLPSRR*IMYYLQIGGGG
Trigger: TCCCCCACCCCCGATCTGCAAGTAATACATTATCAACCTGCGAGATGGCAGGCTGTCACCCTGTACACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGGCGGCTGCAGAGTCTaGCAAACCAGGCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCGGCRV*QTRLGG
Trigger: GCCCCCGAGCCTGGTTTGTCAGACTCTGCAGCCGCC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGGAAGTGGGAGGTGCCTaGATGGGCACCACAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEEVGGA*MGTTVP
Trigger: GGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTC...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGGAAGTGGGAGGTGCCTaGATGGGCACCACAGTTCCC +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSEVGGA*MGTTVP
Trigger: GGGAACTGTGGTGCCCATTCAGGCACCTCCCACTTC...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGAGGTCGGGCGAGGTCTaGACGCCTGTGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWRSGEV*TPVLLV
Trigger: CACCAAGAGCACAGGCGTGCAGACCTCGCCCGACCT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCGGCACTGAGGGCAGGTaGGTAAACGGTGGCAACCTC +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSGTEGR*VNGGNL
Trigger: GAGGTTGCCACCGTTTACGCACCTGCCCTCAGTGCC...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGTCGGGGGACAGGCACTaGATCGGGGGTGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARSGDRH*IGGEQA
Trigger: GGCCTGCTCACCCCCGATGCAGTGCCTGTCCCCCGA...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGAGTTGGCCGTGCTCCTaGGTGGGAACCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLESWPCS*VGTVKE
Trigger: CTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACT...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCTCCCCCGGTCCTGCTTaGCCCTCCCGAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCSPGPA*PSRAAG
Trigger: ACCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGA...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGGTTTCCGAGGGCGCCTaGAGCCCGTTGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSVSEGA*SPLRCV
Trigger: CACACATCTCAACGGGCTCCAGGCGCCCTCGGAAAC...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGATCGACCACTTCCGTATaGGGCACGATTCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGSTTSV*GTIRWH
Trigger: ATGCCAACGAATCGTGCCTCATACGGAAGTGGTCGA...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGCACTGTCATGTATTTaGGGTAGGCTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGALSCI*GRLLCR
Trigger: CCTGCAGAGCAGCCTACCGCAAATACATGACAGTGC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCGTTGGGGATGGACCTaGGTGCGGGCACTGTCATGT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWRWGWT*VRALSC
Trigger: ACATGACAGTGCCCGCACGCAGGTCCATCCCCAACG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGGCCTCCCCCGGTCCTaGTTGGCCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLGLPRS*LALPSS
Trigger: GCTGCTCGGGAGGGCCAAGCAGGACCGGGGGAGGCC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGGCACTGAGGGCAGGTaGGTAAACGGTGGCAACCTC +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWGTEGR*VNGGNL
Trigger: GAGGTTGCCACCGTTTACGCACCTGCCCTCAGTGCC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAAGTTGGCCGTGCTCCTaGGTGGGAACCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLSWPCS*VGTVKE
Trigger: CTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGTGCAGGACACGGGCTTaGCCTCCCGCTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARCRTRA*PPASPP
Trigger: TGGGGGAGAAGCGGGAGGCCAAGCCCGTGTCCTGCA...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGGAAAACCAAGGCTGTaGTCTTGTGCACCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLGKPRL*SCAPAP
Trigger: CGGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGCGGATGGAGGCCGAGTaGAGTTTTGGAGCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSRMEAE*SFGAQL
Trigger: AAGCTGCGCTCCAAAACTCCACTCGGCCTCCATCCG...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGGGCTCCTCGGAGTTTaGCCTCCCCCGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCGLLGV*PPPVLL
Trigger: AAGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGTTTCCGAGGGCGCCTaGAGCCCGTTGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLVSEGA*SPLRCV
Trigger: CACACATCTCAACGGGCTCCAGGCGCCCTCGGAAAC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGACGCAGGGCGAGAAGTaGGAGGTGCCTGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWTQGEK*EVPEWA
Trigger: TGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGATGGCTGCACTTACCATaGCTAACAGTGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGWLHLP*LTVSRR
Trigger: CCTCCGAGACACTGTTAGCCATGGTAAGTGCAGCCA...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATCGGGGGCCCTGGCACTaGGGGCAGGTGCGTAAACGG +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYRGPWH*GQVRKR
Trigger: CCGTTTACGCACCTGCCCTCAGTGCCAGGGCCCCCG...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAATTAAAGGCATATCCTaGCTTTGGGGGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGIKGIS*LWGTPG
Trigger: GCCAGGAGTCCCCCAAAGTCAGGATATGCCTTTAAT...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGATAAGTCGAGGTCGATaGAGCGCCTGGCTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWISRGR*SAWLGH
Trigger: ATGCCCGAGCCAGGCGCTGCATCGACCTCGACTTAT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTCTCGCTGCGGACCCTaGCAAGCCTGGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPSRCGP*QAWGGT
Trigger: CGTGCCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGA...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAAGAAATCTATTTGCGTaGGCCGTTATGGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGRNLFA*AVMDSG
Trigger: CCCGGAATCCATAACGGCTCACGCAAATAGATTTCT...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCCACTCTCCGACGTTGTaGGTATGCATTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSHSPTL*VCICRC
Trigger: ACACCGGCAAATGCATACTCACAACGTCGGAGAGTG...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAACGGGGGCCCTGGCACTaGGGGCAGGTGCGTAAACGG +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQRGPWH*GQVRKR
Trigger: CCGTTTACGCACCTGCCCTCAGTGCCAGGGCCCCCG...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGGCGGCTGCAGAGTCTaGCAAACCAGGCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLGGCRV*QTRLGG
Trigger: GCCCCCGAGCCTGGTTTGTCAGACTCTGCAGCCGCC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGATCTGAAGTTGTGCTTTaGGGTCGACCACTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGSEVVL*GRPLPY
Trigger: ATACGGAAGTGGTCGACCTCAAAGCACAACTTCAGA...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGATACATCCCACATCAGTaGACTGCAAAGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGYIPHQ*TAKNSW
Trigger: CCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTA...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGGCACAGAATGCCTGTaGTTTATTGGTGGGTGGATT +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGGTECL*FIGGWI
Trigger: AATCCACCCACCAATAAATCACAGGCATTCTGTGCC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGGGGAGAGTTGGCCGTaGTCCTGGGTGGGAACCGTG +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKGESWP*SWVGTV
Trigger: CACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTCGGGGGACAGGCACTaGATCGGGGGTGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYSGDRH*IGGEQA
Trigger: GGCCTGCTCACCCCCGATGCAGTGCCTGTCCCCCGA...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCAGTTGGCCGTGCTCCTaGGTGGGAACCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCSWPCS*VGTVKE
Trigger: CTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCAAAGGGATCTGCAGCTaGGAGGCTTTTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSKGICS*EAFEVP
Trigger: GGGAACCTCAAAAGCCTCCCAGCTGCAGATCCCTTT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGACGCAGGGCGAGAAGTaGGAGGTGCCTGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARTQGEK*EVPEWA
Trigger: TGCCCATTCAGGCACCTCCCACTTCTCGCCCTGCGT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGTGGCTGCACTTACCATaGCTAACAGTGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEWLHLP*LTVSRR
Trigger: CCTCCGAGACACTGTTAGCCATGGTAAGTGCAGCCA...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGGACCCTGGCAAGCCTaGGGCGGCACGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIGPWQA*GGTEHS
Trigger: GGAGTGCTCCGTGCCGCCCCAGGCTTGCCAGGGTCC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCTGCCGGTGTCCTTACTaGCCATGGTTCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCCRCPY*PWFWSC
Trigger: GCAGCTCCAGAACCATGGTCAGTAAGGACACCGGCA...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAAAGTTCTCCATCATCTaGAGTTGTGCTTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGKFSII*SCALRS
Trigger: CGACCTCAAAGCACAACTTCAGATGATGGAGAACTT...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCCCTTTTTCCAACTCCTaGATGACCCCCAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSPFSNS*MTPKST
Trigger: AGTGCTCTTGGGGGTCATTCAGGAGTTGGAAAAAGG...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGGCGAAGGTATGACCTaGGTTTCCTCAATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLGEGMT*VSSIGW
Trigger: CCACCCTATTGAGGAAACTCAGGTCATACCTTCGCC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGAGACTCCAGACACCGTaGGTGTTAAAGGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSRLQTP*VLKEPE
Trigger: CTCTGGTTCCTTTAACACTCACGGTGTCTGGAGTCT...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGAGACTCCAGACACCGTaGGTGTTAAAGGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLERLQTP*VLKEPE
Trigger: CTCTGGTTCCTTTAACACTCACGGTGTCTGGAGTCT...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGCGGAATTTGATGTGCTaGAAATTGCACTCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLERNLMC*KLHSPP
Trigger: AGGGGGCGAGTGCAATTTTCAGCACATCAAATTCCG...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGCGGAATTTGATGTGCTaGAAATTGCACTCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSRNLMC*KLHSPP
Trigger: AGGGGGCGAGTGCAATTTTCAGCACATCAAATTCCG...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTACGCACTGTTTCTCTTTaGGATGGTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLRTVSL*DGQGFH
Trigger: GTGGAAGCCCTGACCATCTCAAAGAGAAACAGTGCG...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGTCTCTGAAAGGACTTaGATTTGGAGCCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGVSERT*IWSQEM
Trigger: CATTTCCTGGCTCCAAATTCAAGTCCTTTCAGAGAC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGCACTGTCATGTATTTaGGGTAGGCTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWALSCI*GRLLCR
Trigger: CCTGCAGAGCAGCCTACCGCAAATACATGACAGTGC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGAAGGCTGTGGTCTTGTaGACCCGCCCCGCGCCACAT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKKAVVL*TRPAPH
Trigger: ATGTGGCGCGGGGCGGGTGCACAAGACCACAGCCTT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATCGGGGGACAGGCACTaGATCGGGGGTGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQSGDRH*IGGEQA
Trigger: GGCCTGCTCACCCCCGATGCAGTGCCTGTCCCCCGA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGCCCACATCAGTGAACTaGAAAGAACAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEPTSVN*KEQLAR
Trigger: CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGG...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGGGAAGTCCTTTCCGCTaGTCCAGGTCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARGSPFR*SRSQLL
Trigger: GAGTAGCTGGGACCTGGAGCAGCGGAAAGGACTTCC...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGCCGGGCCTCCTCCATaGGTCCAGCCTCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKAGPPP*VQPRSS
Trigger: AGAAGAACGAGGCTGGACCCATGGAGGAGGCCCGGC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTTGACCCCCAAAGGCTaGTCCACTGTGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSLTPKG*STVFMC
Trigger: ACACATGAACACAGTGGACCAGCCTTTGGGGGTCAA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTGGGCTCCTCGGAGTTTaGCCTCCCCCGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPGLLGV*PPPVLL
Trigger: AAGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCC...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCTGGGAGGTGCCTGAATaGGCACCACAGTTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCWEVPE*APQFPR
Trigger: TCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCA...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAACTGCAAAGAACAGCTaGCAAGGAGTGACACAGAAT +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGTAKNS*QGVTQN
Trigger: ATTCTGTGTCACTCCTTGCCAGCTGTTCTTTGCAGT...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGACTTTGGGGGACTCCTaGCTGCTGGCCATTTGGAAA +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWTLGDS*LLAIWK
Trigger: TTTCCAAATGGCCAGCAGCCAGGAGTCCCCCAAAGT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCAGAAATCTATTTGCGTaGGCCGTTATGGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSRNLFA*AVMDSG
Trigger: CCCGGAATCCATAACGGCTCACGCAAATAGATTTCT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTCGCCTGTGCTCTTGGTaGCGTTGGGGATGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLRLCSW*RWGWTC
Trigger: GCAGGTCCATCCCCAACGTCACCAAGAGCACAGGCG...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAGCGCCTGGAGCCCGTTaGGATGTGTGGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQAPGAR*DVWLSS
Trigger: GGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGC...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAGCACTGCATCGGGGGTaGGCAGGCCAGGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQALHRG*AGQGSF
Trigger: GAAACTGCCCTGGCCTGCTCACCCCCGATGCAGTGC...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCGCTTTTAAAGGGATCTaGAGCTGGGAGGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSAFKGI*SWEAFE
Trigger: CTCAAAAGCCTCCCAGCTGCAGATCCCTTTAAAAGC...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATAAGGCTGTGGTCTTGTaGACCCGCCCCGCGCCACAT +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYKAVVL*TRPAPH
Trigger: ATGTGGCGCGGGGCGGGTGCACAAGACCACAGCCTT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTACCCACATCAGTGAACTaGAAAGAACAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLPTSVN*KEQLAR
Trigger: CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGG...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAACCTCCTGAGGGCAGGTaGAGCGGGCTCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQPPEGR*SGLLGV
Trigger: AACTCCGAGGAGCCCGCTCCACCTGCCCTCAGGAGG...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGTGTGACACTGAGATGTaGTCACTTGGCTTAGCGCTA +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSCDTEM*SLGLAL
Trigger: TAGCGCTAAGCCAAGTGACCACATCTCAGTGTCACA...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTTTCAAGGCCCGATCTaGTTACTGATCACTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSFQGPI*LLITRS
Trigger: GGACCTAGTGATCAGTAACCAGATCGGGCCTTGAAA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGCACTCTCCGACGTTGTaGGTATGCATTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARHSPTL*VCICRC
Trigger: ACACCGGCAAATGCATACTCACAACGTCGGAGAGTG...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCGCCTGTGCTCTTGGTaGCGTTGGGGATGGACCTGC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIRLCSW*RWGWTC
Trigger: GCAGGTCCATCCCCAACGTCACCAAGAGCACAGGCG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGTCTGAAGTTGTGCTTTaGGGTCGACCACTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWSEVVL*GRPLPY
Trigger: ATACGGAAGTGGTCGACCTCAAAGCACAACTTCAGA...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTGGTCTCCGACCACTTaGAAAAATTGTGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSWSPTT*KNCAFS
Trigger: GGAGAAAGCACAATTTTTTCAAGTGGTCGGAGACCA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGCCAGGAAATGTCTCTaGAGTTATGGTTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGARKCL*SYGFSQ
Trigger: TTGAGAAAAACCATAACTTCAGAGACATTTCCTGGC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATGCGGTAGGCTGCTCTaGAGGACACGGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQCGRLL*RTRAWP
Trigger: AGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTGCGGTAGGCTGCTCTaGAGGACACGGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEICGRLL*RTRAWP
Trigger: AGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGTTGGCATTCTTCACCTaGAGCAACCGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARLAFFT*SNRCGT
Trigger: AGTCCCACAGCGGTTGCTGCAGGTGAAGAATGCCAA...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCTTGGCATTCTTCACCTaGAGCAACCGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCLAFFT*SNRCGT
Trigger: AGTCCCACAGCGGTTGCTGCAGGTGAAGAATGCCAA...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGCATCATCTGAAGTTGTaGTTTGAGGTCGACCACTTC +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSHHLKL*FEVDHF
Trigger: GAAGTGGTCGACCTCAAAGCACAACTTCAGATGATG...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGCGAGAAGTGGGAGGTaGCTGAATGGGCACCACAGT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKARSGR*LNGHHS
Trigger: ACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTACACAAAAACACTGTCTaGCATGGCACAGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLHKNTV*HGTECL
Trigger: CAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTG...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTTCAGGATCTTCCGCTaGTTACAGATAAGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSFRIFR*LQISRG
Trigger: ACCTCGACTTATCTGTAAGCAGCGGAAGATCCTGAA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTACAATTAGCTGTGTCTTaGCCCGTCCGATATGAAAGC +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLQLAVS*PVRYES
Trigger: GCTTTCATATCGGACGGGGCAAGACACAGCTAATTG...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAATTCCGGGGGAGAGTTaGCCGTGCTCCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQIPGES*PCSWVG
Trigger: TCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAAT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAGCCGGGCCTCCTCCATaGGTCCAGCCTCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQAGPPP*VQPRSS
Trigger: AGAAGAACGAGGCTGGACCCATGGAGGAGGCCCGGC...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTGGAAAACCAAGGCTGTaGTCTTGTGCACCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPGKPRL*SCAPAP
Trigger: CGGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCC...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGATGTGTTGGTTGGAATaGAAAACCAAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSMCWLE*KTKAVV
Trigger: GACCACAGCCTTGGTTTTCCATTCCAACCAACACAT...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAACTGTGTTCATGTGTTaGTTGGAATGGAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGTVFMC*LEWKTK
Trigger: CTTGGTTTTCCATTCCAACCAACACATGAACACAGT...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGTTTCTTAGAACCGGCTaGAGTTTGTCTTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEFLRTG*SLSSCC
Trigger: GCAGCAAGAAGACAAACTCCAGCCGGTTCTAAGAAA...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGTGGCTGCACTTACCATaGCTAACAGTGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARWLHLP*LTVSRR
Trigger: CCTCCGAGACACTGTTAGCCATGGTAAGTGCAGCCA...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGGGTGGTCGCTTCTCATaGGTTAACATCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEGGRFS*VNISSK
Trigger: TTTAGAGCTGATGTTAACCCATGAGAAGCGACCACC...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGAAGTTCTCCATCATCTaGAGTTGTGCTTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWKFSII*SCALRS
Trigger: CGACCTCAAAGCACAACTTCAGATGATGGAGAACTT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGGATGGTTTCTTGGCTTaGACTGATCAAGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEDGFLA*TDQVLH
Trigger: ATGGAGAACTTGATCAGTTCAAGCCAAGAAACCATC...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTCTGACAAAAGCAGGTaGGATCCTTTTACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSSDKSR*DPFTKV
Trigger: AACCTTGGTAAAAGGATCTCACCTGCTTTTGTCAGA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGGGGATGGACCTGCGTaGGGGCACTGTCATGTATTT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKGDGPA*GHCHVF
Trigger: AAATACATGACAGTGCCCGCACGCAGGTCCATCCCC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAACGTTGGGGATGGACCTaGGTGCGGGCACTGTCATGT +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQRWGWT*VRALSC
Trigger: ACATGACAGTGCCCGCACGCAGGTCCATCCCCAACG...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCGTTGGGGATGGACCTaGGTGCGGGCACTGTCATGT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIRWGWT*VRALSC
Trigger: ACATGACAGTGCCCGCACGCAGGTCCATCCCCAACG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTGCGAGAAGTGGGAGGTaGCTGAATGGGCACCACAGT +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPARSGR*LNGHHS
Trigger: ACTGTGGTGCCCATTCAGGCACCTCCCACTTCTCGC...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGGATGTCCTCATTTACTaGAATTGTCTTCGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSDVLIY*NCLRRD
Trigger: ATCTCGCCGAAGACAATTGCAGTAAATGAGGACATC...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS-3UTR GCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTATAAGTCGAGGTCGATaGAGCGCCTGGCTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLISRGR*SAWLGH
Trigger: ATGCCCGAGCCAGGCGCTGCATCGACCTCGACTTAT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGTTGCGTGAGCCGTTATaGATTCCGGGGGAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKLREPL*IPGESW
Trigger: CCAACTCTCCCCCGGAATCCATAACGGCTCACGCAA...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGGAAAACCAAGGCTGTaGTCTTGTGCACCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIGKPRL*SCAPAP
Trigger: CGGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGTGTTCATGTGTTGGTTaGAATGGAAAACCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLECSCVG*NGKPRL
Trigger: CAGCCTTGGTTTTCCATTCCAACCAACACATGAACA...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGTGTTCATGTGTTGGTTaGAATGGAAAACCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSCSCVG*NGKPRL
Trigger: CAGCCTTGGTTTTCCATTCCAACCAACACATGAACA...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATCGGGCTCTTCGGATaGAGGCCGAGTGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKIGLFG*RPSGVL
Trigger: CAAAACTCCACTCGGCCTCCATCCGAAGAGCCCGAT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGTTTCCGAGGGCGCCTaGAGCCCGTTGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIVSEGA*SPLRCV
Trigger: CACACATCTCAACGGGCTCCAGGCGCCCTCGGAAAC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGGGAGGTGCCTGAATaGGCACCACAGTTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPWEVPE*APQFPR
Trigger: TCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCA...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAACTGCAAAGAACAGCTaGCAAGGAGTGACACAGAAT +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLTAKNS*QGVTQN
Trigger: ATTCTGTGTCACTCCTTGCCAGCTGTTCTTTGCAGT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGCCTGTGATTTATTGGTaGGTGGATTATCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEPVIYW*VDYPSC
Trigger: ACACGATGGATAATCCACCCACCAATAAATCACAGG...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATGCCTGTGATTTATTaGTGGGTGGATTATCCATCG +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSMPVIY*WVDYPS
Trigger: CGATGGATAATCCACCCACCAATAAATCACAGGCAT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGCTCTAAAAGGAACGTaGGTTTCCCTGCATCTACAA +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLALKGT*VSLHLQ
Trigger: TTGTAGATGCAGGGAAACCCACGTTCCTTTTAGAGC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCAGAAATCTATTTGCGTaGGCCGTTATGGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCRNLFA*AVMDSG
Trigger: CCCGGAATCCATAACGGCTCACGCAAATAGATTTCT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATGCCGGTGTCCTTACTaGCCATGGTTCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQCRCPY*PWFWSC
Trigger: GCAGCTCCAGAACCATGGTCAGTAAGGACACCGGCA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTTTCTTGGCTTGAACTaGTCAAGTTCTCCATCATCT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSFLGLN*SSSPSS
Trigger: AGATGATGGAGAACTTGATCAGTTCAAGCCAAGAAA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGGCGAAGGTATGACCTaGGTTTCCTCAATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKGEGMT*VSSIGW
Trigger: CCACCCTATTGAGGAAACTCAGGTCATACCTTCGCC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCTACATCCCACATCAGTaGACTGCAAAGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RASTINTKHNELYITSGCYIPHQ*TAKNSW
Trigger: CCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTA...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGCTTTCTCCGGAATTTaGTGTGCTGAAAATTGCACT +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLAFSGI*CAENCT
Trigger: AGTGCAATTTTCAGCACATCAAATTCCGGAGAAAGC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGCTTTCTCCGGAATTTaGTGTGCTGAAAATTGCACT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWAFSGI*CAENCT
Trigger: AGTGCAATTTTCAGCACATCAAATTCCGGAGAAAGC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGTTGGCATCTAGTCAATaGGGTGTGCATGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARLASSQ*GVHVST
Trigger: AGTGCTGACATGCACACCTCATTGACTAGATGCCAA...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGTCTGACAAAAGCAGGTaGGATCCTTTTACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWSDKSR*DPFTKV
Trigger: AACCTTGGTAAAAGGATCTCACCTGCTTTTGTCAGA...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGTATTTGCGGTAGGCTaGTCTGCAGGACACGGGCTT +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYVFAVG*SAGHGL
Trigger: AAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATAC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTGTATTTGCGGTAGGCTaGTCTGCAGGACACGGGCTT +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPVFAVG*SAGHGL
Trigger: AAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATAC...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGGGGATGGACCTGCGTaGGGGCACTGTCATGTATTT +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLGDGPA*GHCHVF
Trigger: AAATACATGACAGTGCCCGCACGCAGGTCCATCCCC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGGGGATGGACCTGCGTaGGGGCACTGTCATGTATTT +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYGDGPA*GHCHVF
Trigger: AAATACATGACAGTGCCCGCACGCAGGTCCATCCCC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGGCTTTTAAAGGGATCTaGAGCTGGGAGGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARAFKGI*SWEAFE
Trigger: CTCAAAAGCCTCCCAGCTGCAGATCCCTTTAAAAGC...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCATAAGGGAACCCTGTaGGTTTTACCTTGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWHKGTL*VLPCFC
Trigger: ACAAAAGCAAGGTAAAACGCACAGGGTTCCCTTATG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGCGTGAGCCGTTATaGATTCCGGGGGAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPLREPL*IPGESW
Trigger: CCAACTCTCCCCCGGAATCCATAACGGCTCACGCAA...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGTGTTCATGTGTTGGTTaGAATGGAAAACCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWCSCVG*NGKPRL
Trigger: CAGCCTTGGTTTTCCATTCCAACCAACACATGAACA...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGACTGTGTTCATGTGTTaGTTGGAATGGAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLETVFMC*LEWKTK
Trigger: CTTGGTTTTCCATTCCAACCAACACATGAACACAGT...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATATCGGGCTCTTCGGATaGAGGCCGAGTGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYIGLFG*RPSGVL
Trigger: CAAAACTCCACTCGGCCTCCATCCGAAGAGCCCGAT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CAA 72 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATaGGTGGGTGGATTATCCATCGTGTATCTCTATGTA +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDL*VGGLSIVYLYV
Trigger: TACATAGAGATACACGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTCGACCACTTCCGTATaGGGCACGATTCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPSTTSV*GTIRWH
Trigger: ATGCCAACGAATCGTGCCTCATACGGAAGTGGTCGA...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTTCTTGGCTTGAACTaGTCAAGTTCTCCATCATCT +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLFLGLN*SSSPSS
Trigger: AGATGATGGAGAACTTGATCAGTTCAAGCCAAGAAA...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGCCTTTTTCCAACTCCTaGATGACCCCCAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKPFSNS*MTPKST
Trigger: AGTGCTCTTGGGGGTCATTCAGGAGTTGGAAAAAGG...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGGCGAAGGTATGACCTaGGTTTCCTCAATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLGEGMT*VSSIGW
Trigger: CCACCCTATTGAGGAAACTCAGGTCATACCTTCGCC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGTGGTCTCCGACCACTTaGAAAAATTGTGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARWSPTT*KNCAFS
Trigger: GGAGAAAGCACAATTTTTTCAAGTGGTCGGAGACCA...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATCGCACTGTTTCTCTTTaGGATGGTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYRTVSL*DGQGFH
Trigger: GTGGAAGCCCTGACCATCTCAAAGAGAAACAGTGCG...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATGGTTTTTCTCAATGTaGGAGGTAAGATCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLWFFSM*EVRSLV
Trigger: AACCAAGGATCTTACCTCTCACATTGAGAAAAACCA...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGCCAGGAAATGTCTCTaGAGTTATGGTTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLARKCL*SYGFSQ
Trigger: TTGAGAAAAACCATAACTTCAGAGACATTTCCTGGC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCCTCAGTTCCTTTTATTaGTATTCAGGGATTCGAACT +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSLSSFY*YSGIRT
Trigger: AGTTCGAATCCCTGAATATCAATAAAAGGAACTGAG...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAGTATTTGCGGTAGGCTaGTCTGCAGGACACGGGCTT +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQVFAVG*SAGHGL
Trigger: AAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATAC...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGCACTGTCATGTATTTaGGGTAGGCTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLALSCI*GRLLCR
Trigger: CCTGCAGAGCAGCCTACCGCAAATACATGACAGTGC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGATTAAAGCATACAACTaGAGTGTTGTTTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARIKAYN*SVVWPP
Trigger: CGGGGGCCAAACAACACTGCAGTTGTATGCTTTAAT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTTGCGTGAGCCGTTATaGATTCCGGGGGAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEILREPL*IPGESW
Trigger: CCAACTCTCCCCCGGAATCCATAACGGCTCACGCAA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTAAAGGGATCTGCAGCTaGGAGGCTTTTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLKGICS*EAFEVP
Trigger: GGGAACCTCAAAAGCCTCCCAGCTGCAGATCCCTTT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCAGAAACCCATTGTTTTaGCTTTTAAAGGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSRNPLF*LLKGSA
Trigger: TGCAGATCCCTTTAAAAGCCAAAACAATGGGTTTCT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGTTGACCCCCAAAGGCTaGTCCACTGTGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKLTPKG*STVFMC
Trigger: ACACATGAACACAGTGGACCAGCCTTTGGGGGTCAA...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTCCACACCTTCCCGATaGGCCTCTCCTTTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYSTPSR*ASPFSN
Trigger: GTTGGAAAAAGGAGAGGCCCATCGGGAAGGTGTGGA...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424811.2
ENST00000614311.4
CDS-3UTR CCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGAAAGCCCTTCCCGATaGGCCTCTCCTTTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLESPSR*ASPFSN
Trigger: GTTGGAAAAAGGAGAGGCCCATCGGGAAGGGCTTTC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCACTCTCCGACGTTGTaGGTATGCATTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIHSPTL*VCICRC
Trigger: ACACCGGCAAATGCATACTCACAACGTCGGAGAGTG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTCGACCACTTCCGTATaGGGCACGATTCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEISTTSV*GTIRWH
Trigger: ATGCCAACGAATCGTGCCTCATACGGAAGTGGTCGA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGTCTGAAGTTGTGCTTTaGGGTCGACCACTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKSEVVL*GRPLPY
Trigger: ATACGGAAGTGGTCGACCTCAAAGCACAACTTCAGA...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGGATGGTTTCTTGGCTTaGACTGATCAAGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARDGFLA*TDQVLH
Trigger: ATGGAGAACTTGATCAGTTCAAGCCAAGAAACCATC...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTCCTTTTTCCAACTCCTaGATGACCCCCAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPPFSNS*MTPKST
Trigger: AGTGCTCTTGGGGGTCATTCAGGAGTTGGAAAAAGG...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTATTAAAGGCATATCCTaGCTTTGGGGGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLIKGIS*LWGTPG
Trigger: GCCAGGAGTCCCCCAAAGTCAGGATATGCCTTTAAT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTGAAGCAGCTCCAATCTaGCAAAAGCAGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPEAAPI*QKQVRS
Trigger: GGATCTCACCTGCTTTTGTCAGATTGGAGCTGCTTC...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGAAGCAGCTCCAATCTaGCAAAAGCAGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYEAAPI*QKQVRS
Trigger: GGATCTCACCTGCTTTTGTCAGATTGGAGCTGCTTC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGCACAAAAACACTGTCTaGCATGGCACAGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKHKNTV*HGTECL
Trigger: CAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTG...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGAACGTGGGTTTCCCTaGATCTACAAAGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKERGFP*IYKGHV
Trigger: AACATGGCCTTTGTAGATGCAGGGAAACCCACGTTC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCAAAGGGATCTGCAGCTaGGAGGCTTTTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIKGICS*EAFEVP
Trigger: GGGAACCTCAAAAGCCTCCCAGCTGCAGATCCCTTT...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGAGAAACCCATTGTTTTaGCTTTTAAAGGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWRNPLF*LLKGSA
Trigger: TGCAGATCCCTTTAAAAGCCAAAACAATGGGTTTCT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTCCACACCTTCCCGATaGGCCTCTCCTTTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEISTPSR*ASPFSN
Trigger: GTTGGAAAAAGGAGAGGCCCATCGGGAAGGTGTGGA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424811.2
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAACTTTGGGGGACTCCTaGCTGCTGGCCATTTGGAAA +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQTLGDS*LLAIWK
Trigger: TTTCCAAATGGCCAGCAGCCAGGAGTCCCCCAAAGT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTACCAGAATGTATTATTTaGCCTTTGGGTACCAAAAGA +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLPECII*PLGTKR
Trigger: TCTTTTGGTACCCAAAGGCCAAATAATACATTCTGG...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGATGCCTGTGATTTATTaGTGGGTGGATTATCCATCG +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARMPVIY*WVDYPS
Trigger: CGATGGATAATCCACCCACCAATAAATCACAGGCAT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGATTGTACATAACGTCTaGCTGCACTTACCATGGCTA +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARIVHNV*LHLPWL
Trigger: TAGCCATGGTAAGTGCAGCCAGACGTTATGTACAAT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAACTCCTTTTATTCCATaGAGAGTGGTACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLTPFIP*RVVLEN
Trigger: ATTTTCCAGTACCACTCTCCATGGAATAAAAGGAGT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
3UTR CAA 72 bp AGTGACACAGAATACCTTGCTTCTGTTAATTATCTATaGGTACAAAGGCCTTTTTGGTACGCAGGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: SDTEYLASVNYL*VQRPFWYAGRE
Trigger: TTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACCAATAGATAATTAACAGAAGCAAGGTATTCTGTGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
3UTR CAA 72 bp GCAAAGAACAGCTGGCAAGGAGTGACACAGAATACCTaGCTTCTGTTAATTATCTATTGGTACAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AKNSWQGVTQNT*LLLIIYWYKGL
Trigger: AAGGCCTTTGTACCAATAGATAATTAACAGAAGCAAGGTATTCTGTGTCACTCCTTGCCAGCTGTTCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCAGACTCCAGACACCGTaGGTGTTAAAGGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIRLQTP*VLKEPE
Trigger: CTCTGGTTCCTTTAACACTCACGGTGTCTGGAGTCT...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCGGAATTTGATGTGCTaGAAATTGCACTCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIRNLMC*KLHSPP
Trigger: AGGGGGCGAGTGCAATTTTCAGCACATCAAATTCCG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGCCTGTCTACTTGCAGTaGTTAAAGGCATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKPVYLQ*LKAYPD
Trigger: GTCAGGATATGCCTTTAATCACTGCAAGTAGACAGG...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGAAGCAGCTCCAATCTaGCAAAAGCAGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIEAAPI*QKQVRS
Trigger: GGATCTCACCTGCTTTTGTCAGATTGGAGCTGCTTC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGTCTCTGAAAGGACTTaGATTTGGAGCCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKVSERT*IWSQEM
Trigger: CATTTCCTGGCTCCAAATTCAAGTCCTTTCAGAGAC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGGGAAAGAAATCTATTTaGGTGAGCCGTTATGGATTC +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARGKKSI*VSRYGF
Trigger: GAATCCATAACGGCTCACGCAAATAGATTTCTTTCC...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGCTTTTAAAGGGATCTaGAGCTGGGAGGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYAFKGI*SWEAFE
Trigger: CTCAAAAGCCTCCCAGCTGCAGATCCCTTTAAAAGC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAAGTTTCCATCTTCCGTaGTTTTTAGATTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLSFHLP*FLDSVL
Trigger: CAAAACTGAATCTAAAAAGCACGGAAGATGGAAACT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGAGTTTCCATCTTCCGTaGTTTTTAGATTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWSFHLP*FLDSVL
Trigger: CAAAACTGAATCTAAAAAGCACGGAAGATGGAAACT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAACCCACATCAGTGAACTaGAAAGAACAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQPTSVN*KEQLAR
Trigger: CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGG...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGTTCAGGATCTTCCGCTaGTTACAGATAAGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKFRIFR*LQISRG
Trigger: ACCTCGACTTATCTGTAAGCAGCGGAAGATCCTGAA...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCTTCCTCATTGTTCTTaGACCAAAATATTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWLPHCS*TKIFLS
Trigger: ACTGAGAAATATTTTGGTGCAAGAACAATGAGGAAG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATGTGTTGGTTGGAATaGAAAACCAAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKMCWLE*KTKAVV
Trigger: GACCACAGCCTTGGTTTTCCATTCCAACCAACACAT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGACTGTGTTCATGTGTTaGTTGGAATGGAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARTVFMC*LEWKTK
Trigger: CTTGGTTTTCCATTCCAACCAACACATGAACACAGT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTTGACCCCCAAAGGCTaGTCCACTGTGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEILTPKG*STVFMC
Trigger: ACACATGAACACAGTGGACCAGCCTTTGGGGGTCAA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGAAACACTGTCTGCCATaGCACAGAATGCCTGTGATT +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKKHCLP*HRMPVI
Trigger: AATCACAGGCATTCTGTGCCATGGCAGACAGTGTTT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGAACTGCAGTGTTGTTTaGCCCCCGAAGAATGTTTAC +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKNCSVV*PPKNVY
Trigger: GTAAACATTCTTCGGGGGCCAAACAACACTGCAGTT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTCCTGTCTACTTGCAGTaGTTAAAGGCATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPPVYLQ*LKAYPD
Trigger: GTCAGGATATGCCTTTAATCACTGCAAGTAGACAGG...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTTGGCATCTAGTCAATaGGGTGTGCATGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEILASSQ*GVHVST
Trigger: AGTGCTGACATGCACACCTCATTGACTAGATGCCAA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTCCTTAAACCGCACCTaGAGGGCTTTGTTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEISLNRT*RALFRF
Trigger: AAAACGGAACAAAGCCCTGCAGGTGCGGTTTAAGGA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCACAAAAACACTGTCTaGCATGGCACAGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIHKNTV*HGTECL
Trigger: CAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGAACGTGGGTTTCCCTaGATCTACAAAGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIERGFP*IYKGHV
Trigger: AACATGGCCTTTGTAGATGCAGGGAAACCCACGTTC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTATTAAAGCATACAACTaGAGTGTTGTTTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLIKAYN*SVVWPP
Trigger: CGGGGGCCAAACAACACTGCAGTTGTATGCTTTAAT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGACTTTGATGGTTTCTTaGCTTGAACTGATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SFQILHPTSVNCKEQLARTLMVS*LELIKF
Trigger: GAACTTGATCAGTTCAAGCCAAGAAACCATCAAAGT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATACTGCAAAGAACAGCTaGCAAGGAGTGACACAGAAT +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYTAKNS*QGVTQN
Trigger: ATTCTGTGTCACTCCTTGCCAGCTGTTCTTTGCAGT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATGTGACACTGAGATGTaGTCACTTGGCTTAGCGCTA +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQCDTEM*SLGLAL
Trigger: TAGCGCTAAGCCAAGTGACCACATCTCAGTGTCACA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTGTGACACTGAGATGTaGTCACTTGGCTTAGCGCTA +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEICDTEM*SLGLAL
Trigger: TAGCGCTAAGCCAAGTGACCACATCTCAGTGTCACA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATAAACACTGTCTGCCATaGCACAGAATGCCTGTGATT +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYKHCLP*HRMPVI
Trigger: AATCACAGGCATTCTGTGCCATGGCAGACAGTGTTT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGTGTTTCTCTTTGAGATaGTCAGGGCTTCCACCATTA +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKCFSLR*SGLPPL
Trigger: TAATGGTGGAAGCCCTGACCATCTCAAAGAGAAACA...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATTTCAAGGCCCGATCTaGTTACTGATCACTAGGTCC +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQFQGPI*LLITRS
Trigger: GGACCTAGTGATCAGTAACCAGATCGGGCCTTGAAA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGCTCTAAAAGGAACGTaGGTTTCCCTGCATCTACAA +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLALKGT*VSLHLQ
Trigger: TTGTAGATGCAGGGAAACCCACGTTCCTTTTAGAGC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGGTGGTCGCTTCTCATaGGTTAACATCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYGGRFS*VNISSK
Trigger: TTTAGAGCTGATGTTAACCCATGAGAAGCGACCACC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAAGTTCTCCATCATCTaGAGTTGTGCTTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQKFSII*SCALRS
Trigger: CGACCTCAAAGCACAACTTCAGATGATGGAGAACTT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTGCTTTCTCCGGAATTTaGTGTGCTGAAAATTGCACT +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPAFSGI*CAENCT
Trigger: AGTGCAATTTTCAGCACATCAAATTCCGGAGAAAGC...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTGGTCTCCGACCACTTaGAAAAATTGTGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIWSPTT*KNCAFS
Trigger: GGAGAAAGCACAATTTTTTCAAGTGGTCGGAGACCA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAATGTGTTGGTTGGAATaGAAAACCAAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQMCWLE*KTKAVV
Trigger: GACCACAGCCTTGGTTTTCCATTCCAACCAACACAT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTTTCTTAGAACCGGCTaGAGTTTGTCTTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIFLRTG*SLSSCC
Trigger: GCAGCAAGAAGACAAACTCCAGCCGGTTCTAAGAAA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATCCTGTGATTTATTGGTaGGTGGATTATCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYPVIYW*VDYPSC
Trigger: ACACGATGGATAATCCACCCACCAATAAATCACAGG...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTCCTGTGATTTATTGGTaGGTGGATTATCCATCGTGT +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLPVIYW*VDYPSC
Trigger: ACACGATGGATAATCCACCCACCAATAAATCACAGG...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATATGCCTGTGATTTATTaGTGGGTGGATTATCCATCG +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYMPVIY*WVDYPS
Trigger: CGATGGATAATCCACCCACCAATAAATCACAGGCAT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATATTGTACATAACGTCTaGCTGCACTTACCATGGCTA +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYIVHNV*LHLPWL
Trigger: TAGCCATGGTAAGTGCAGCCAGACGTTATGTACAAT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTGTTTCTCTTTGAGATaGTCAGGGCTTCCACCATTA +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYCFSLR*SGLPPL
Trigger: TAATGGTGGAAGCCCTGACCATCTCAAAGAGAAACA...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGGTTTTTCTCAATGTaGGAGGTAAGATCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPWFFSM*EVRSLV
Trigger: AACCAAGGATCTTACCTCTCACATTGAGAAAAACCA...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAACATAAGGGAACCCTGTaGGTTTTACCTTGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQHKGTL*VLPCFC
Trigger: ACAAAAGCAAGGTAAAACGCACAGGGTTCCCTTATG...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAATTGTACATAACGTCTaGCTGCACTTACCATGGCTA +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQIVHNV*LHLPWL
Trigger: TAGCCATGGTAAGTGCAGCCAGACGTTATGTACAAT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATGTTTCTCTTTGAGATaGTCAGGGCTTCCACCATTA +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQCFSLR*SGLPPL
Trigger: TAATGGTGGAAGCCCTGACCATCTCAAAGAGAAACA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAGGAAAGAAATCTATTTaGGTGAGCCGTTATGGATTC +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQGKKSI*VSRYGF
Trigger: GAATCCATAACGGCTCACGCAAATAGATTTCTTTCC...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGAGTTTCCATCTTCCGTaGTTTTTAGATTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VCSQILARMYYLAFGYQKSFHLP*FLDSVL
Trigger: CAAAACTGAATCTAAAAAGCACGGAAGATGGAAACT...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTACAAAGGCCATGTTTaGAACTCCTTTTATTCCATG +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLYKGHV*NSFYSM
Trigger: CATGGAATAAAAGGAGTTGCAAACATGGCCTTTGTA...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTACAAAGGCCATGTTTaGAACTCCTTTTATTCCATG +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYYKGHV*NSFYSM
Trigger: CATGGAATAAAAGGAGTTGCAAACATGGCCTTTGTA...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR GCA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTACTATAGATAATACATaGACTGTTCCTGCATGTGTC +
Preference number: 4 (lower is better)
Translates to: SCISMYVLRFLPECIIWPTIDNT*TVPACV
Trigger: GACACATGCAGGAACAGTGCATGTATTATCTATAGT...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS-3UTR CCA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATACTTTGATGGTTTCTTaGCTTGAACTGATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLSIVYLYVCSQILARMYTLMVS*LELIKF
Trigger: GAACTTGATCAGTTCAAGCCAAGAAACCATCAAAGT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTACTCCTTTTATTCCATaGAGAGTGGTACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLTPFIP*RVVLEN
Trigger: ATTTTCCAGTACCACTCTCCATGGAATAAAAGGAGT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR TCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCTCAGTTCCTTTTATTaGTATTCAGGGATTCGAACT +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEILSSFY*YSGIRT
Trigger: AGTTCGAATCCCTGAATATCAATAAAAGGAACTGAG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCACTTTGATGGTTTCTTaGCTTGAACTGATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LARMYYLAFGYQKIKNEITLMVS*LELIKF
Trigger: GAACTTGATCAGTTCAAGCCAAGAAACCATCAAAGT...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CCA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAACCAGAATGTATTATTTaGCCTTTGGGTACCAAAAGA +
Preference number: 4 (lower is better)
Translates to: FDYVSFISDFTSHISELQPECII*PLGTKR
Trigger: TCTTTTGGTACCCAAAGGCCAAATAATACATTCTGG...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp GGAGGCAGCGGCTGGGCCAGCTCCGGGGACGCCCGCGCGCTCGCTTaGTCGCGACGCGGCGGAGCCAGCCACAGCCACCCGGCTTCGCGC +
Preference number: 5 (lower is better)
Translates to: GGSGWASSGDARALA*SRRGGASHSHPASR
Trigger: GCGCGAAGCCGGGTGGCTGTGGCTGGCTCCGCCGCGTCGCGAGCAAGCGAGCGCGCGGGCGTCCCCGGAGCTGGCCCAGCCGCTGCCTCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS CCA 90 bp GCAGCGCCTGGCTCGGGCATGTCTCGCTGCGGACCCTGGCAAGCCTaGGGCGGCACGGAGCACTCCGGACAGGGCATCCGCGGCCAGACT +
Preference number: 5 (lower is better)
Translates to: AAPGSGMSRCGPWQA*GGTEHSGQGIRGQT
Trigger: AGTCTGGCCGCGGATGCCCTGTCCGGAGTGCTCCGTGCCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp GAGGTCGATGCAGCGCCTGGCTCGGGCATGTCTCGCTGCGGACCCTaGCAAGCCTGGGGCGGCACGGAGCACTCCGGACAGGGCATCCGC +
Preference number: 5 (lower is better)
Translates to: EVDAAPGSGMSRCGP*QAWGGTEHSGQGIR
Trigger: GCGGATGCCCTGTCCGGAGTGCTCCGTGCCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp CAGGTGGAGCGGGCTCCTCGGAGTTTGGCCTCCCCCGGTCCTGCTTaGCCCTCCCGAGCAGCTGGTAATCGGGCTCTTCGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QVERAPRSLASPGPA*PSRAAGNRALRMEA
Trigger: GGCCTCCATCCGAAGAGCCCGATTACCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCCGCTCCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS TCA 90 bp GGGGTGAGCAGGCCAGGGCAGTTTCCGAGGGCGCCTGGAGCCCGTTaGGATGTGTGGCTCTCCTCCGCTCGTCATCTGCCGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GVSRPGQFPRAPGAR*DVWLSSARHLPGRV
Trigger: CACTCTGCCCGGCAGATGACGAGCGGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCCCTCGGAAACTGCCCTGGCCTGCTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp CACTGCATCGGGGGTGAGCAGGCCAGGGCAGTTTCCGAGGGCGCCTaGAGCCCGTTGAGATGTGTGGCTCTCCTCCGCTCGTCATCTGCC +
Preference number: 5 (lower is better)
Translates to: HCIGGEQARAVSEGA*SPLRCVALLRSSSA
Trigger: GGCAGATGACGAGCGGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCCCTCGGAAACTGCCCTGGCCTGCTCACCCCCGATGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp GGGGATGGACCTGCGTGCGGGCACTGTCATGTATTTGCGGTAGGCTaGTCTGCAGGACACGGGCTTGGCCTCCCGCTTCTCCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GDGPACGHCHVFAVG*SAGHGLGLPLLPQL
Trigger: CAGCTGGGGGAGAAGCGGGAGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATACATGACAGTGCCCGCACGCAGGTCCATCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp AGGATCTTCCGCTGCTTACAGATAAGTCGAGGTCGATGCAGCGCCTaGCTCGGGCATGTCTCGCTGCGGACCCTGGCAAGCCTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: RIFRCLQISRGRCSA*LGHVSLRTLASLGR
Trigger: CCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACCTCGACTTATCTGTAAGCAGCGGAAGATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp GCACTGTCATGTATTTGCGGTAGGCTGCTCTGCAGGACACGGGCTTaGCCTCCCGCTTCTCCCCCAGCTGGCCCGAGGACAGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: ALSCICGRLLCRTRA*PPASPPAGPRTAVC
Trigger: ACACACAGCTGTCCTCGGGCCAGCTGGGGGAGAAGCGGGAGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATACATGACAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp GTAAACGGTGGCAACCTCCGTTTTAAACACCCTCCTGAGGGCAGGTaGAGCGGGCTCCTCGGAGTTTGGCCTCCCCCGGTCCTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: VNGGNLRFKHPPEGR*SGLLGVWPPPVLLG
Trigger: GCCAAGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCCGCTCCACCTGCCCTCAGGAGGGTGTTTAAAACGGAGGTTGCCACCGTTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp GTCGACCACTTCCGTATGAGGCACGATTCGTTGGCATTCTTCACCTaGAGCAACCGCTGTGGGACTAGGCTGGTTCCCCAGCCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: VDHFRMRHDSLAFFT*SNRCGTRLVPQPRR
Trigger: CCGCCGGGGCTGGGGAACCAGCCTAGTCCCACAGCGGTTGCTGCAGGTGAAGAATGCCAACGAATCGTGCCTCATACGGAAGTGGTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp AGCCACAGCCACCCGGCTTCGCGCTCCTCCGATGTCCTCATTTACTaGAATTGTCTTCGGCGAGATCTCAGAGCCAGGGCCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SHSHPASRSSDVLIY*NCLRRDLRARARRR
Trigger: CCGCCTCCTGGCCCTGGCTCTGAGATCTCGCCGAAGACAATTGCAGTAAATGAGGACATCGGAGGAGCGCGAAGCCGGGTGGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS CCA 90 bp TTGCGTGAGCCGTTATGGATTCCGGGGGAGAGTTGGCCGTGCTCCTaGGTGGGAACCGTGAAGGAGAAGTCGTCGAGGGGTGGTCGCTTC +
Preference number: 5 (lower is better)
Translates to: LREPLWIPGESWPCS*VGTVKEKSSRGGRF
Trigger: GAAGCGACCACCCCTCGACGACTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp GGTCTGCACGCCTGTGCTCTTGGTGACGTTGGGGATGGACCTGCGTaGGGGCACTGTCATGTATTTGCGGTAGGCTGCTCTGCAGGACAC +
Preference number: 5 (lower is better)
Translates to: GLHACALGDVGDGPA*GHCHVFAVGCSAGH
Trigger: GTGTCCTGCAGAGCAGCCTACCGCAAATACATGACAGTGCCCGCACGCAGGTCCATCCCCAACGTCACCAAGAGCACAGGCGTGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp AGTGCCTTCAGGATCTTCCGCTGCTTACAGATAAGTCGAGGTCGATaGAGCGCCTGGCTCGGGCATGTCTCGCTGCGGACCCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SAFRIFRCLQISRGR*SAWLGHVSLRTLAS
Trigger: GCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACCTCGACTTATCTGTAAGCAGCGGAAGATCCTGAAGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp TGGTCTTGTGCACCCGCCCCGCGCCACATGGCCGGGCCTCCTCCATaGGTCCAGCCTCGTTCTTCTCTTTCGCATCTGTTAGAAACCCAT +
Preference number: 5 (lower is better)
Translates to: WSCAPAPRHMAGPPP*VQPRSSLSHLLETH
Trigger: ATGGGTTTCTAACAGATGCGAAAGAGAAGAACGAGGCTGGACCCATGGAGGAGGCCCGGCCATGTGGCGCGGGGCGGGTGCACAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp GGTCCACTGTGTTCATGTGTTGGTTGGAATGGAAAACCAAGGCTGTaGTCTTGTGCACCCGCCCCGCGCCACATGGCCGGGCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: GPLCSCVGWNGKPRL*SCAPAPRHMAGPPP
Trigger: TGGAGGAGGCCCGGCCATGTGGCGCGGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCCATTCCAACCAACACATGAACACAGTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp GTCCTGCTTGGCCCTCCCGAGCAGCTGGTAATCGGGCTCTTCGGATaGAGGCCGAGTGGAGTTTTGGAGCGCAGCTTCTCCATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VLLGPPEQLVIGLFG*RPSGVLERSFSIAE
Trigger: CTCAGCTATGGAGAAGCTGCGCTCCAAAACTCCACTCGGCCTCCATCCGAAGAGCCCGATTACCAGCTGCTCGGGAGGGCCAAGCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS TCA 90 bp TATGGATTCCGGGGGAGAGTTGGCCGTGCTCCTGGGTGGGAACCGTaGAGGAGAAGTCGTCGAGGGGTGGTCGCTTCTCATGGGTTAACA +
Preference number: 5 (lower is better)
Translates to: YGFRGRVGRAPGWEP*RRSRRGVVASHGLT
Trigger: TGTTAACCCATGAGAAGCGACCACCCCTCGACGACTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp ATCTATTTGCGTGAGCCGTTATGGATTCCGGGGGAGAGTTGGCCGTaGTCCTGGGTGGGAACCGTGAAGGAGAAGTCGTCGAGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: IYLREPLWIPGESWP*SWVGTVKEKSSRGG
Trigger: ACCACCCCTCGACGACTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACGCAAATAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCCGGGCTCCTCGGAGTTaGGCCTCCCCCGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSRAPRS*ASPGPA
Trigger: AGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCCG...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGCGGGCTCCTCGGAGTTaGGCCTCCCCCGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSRAPRS*ASPGPA
Trigger: AGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCCG...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS TCA 90 bp ATGTGGAGAGCCCTCCGAGGAGGAACGGAAAGAAATCTATTTGCGTaGGCCGTTATGGATTCCGGGGGAGAGTTGGCCGTGCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: MWRALRGGTERNLFA*AVMDSGGELAVLLG
Trigger: ACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACGCAAATAGATTTCTTTCCGTTCCTCCTCGGAGGGCTCTCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp AAAGAAATCTATTTGCGTGAGCCGTTATGGATTCCGGGGGAGAGTTaGCCGTGCTCCTGGGTGGGAACCGTGAAGGAGAAGTCGTCGAGG +
Preference number: 5 (lower is better)
Translates to: KEIYLREPLWIPGES*PCSWVGTVKEKSSR
Trigger: CCTCGACGACTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACGCAAATAGATTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGATTCCGGGGGAGAGTaGGCCGTGCTCCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWDSGGE*AVLLGG
Trigger: CCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCCTCCCCCGGTCCTGCTaGGCCCTCCCGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCLPRSC*ALPSSW
Trigger: CCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGAG...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGCTCCCCCGGTCCTGCTaGGCCCTCCCGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SFQILHPTSVNCKEQLARLPRSC*ALPSSW
Trigger: CCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGAG...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCGGCGCCTGGAGCCCGTaGAGATGTGTGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSGAWSP*RCVALL
Trigger: GAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCC...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGGCGCCTGGAGCCCGTaGAGATGTGTGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWGAWSP*RCVALL
Trigger: GAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCC...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGCTCGGCTCCGGGGACTaGGCCCGCTGCGCGCCTGCT +
Preference number: 5 (lower is better)
Translates to: VCSQILARMYYLAFGYQKLGSGD*ARCAPA
Trigger: AGCAGGCGCGCAGCGGGCCAAGTCCCCGGAGCCGAG...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS GCA 90 bp ATAAATGTGGAGAGCCCTCCGAGGAGGAACGGAAAGAAATCTATTTaGGTGAGCCGTTATGGATTCCGGGGGAGAGTTGGCCGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: INVESPPRRNGKKSI*VSRYGFRGRVGRAP
Trigger: AGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACGCAAATAGATTTCTTTCCGTTCCTCCTCGGAGGGCTCTCCACATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 90 bp GTGGGAACCGTGAAGGAGAAGTCGTCGAGGGGTGGTCGCTTCTCATaGGTTAACATCAGCTCTAAAAGGAACGTGGGTTTCCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: VGTVKEKSSRGGRFS*VNISSKRNVGFPAS
Trigger: AGATGCAGGGAAACCCACGTTCCTTTTAGAGCTGATGTTAACCCATGAGAAGCGACCACCCCTCGACGACTTCTCCTTCACGGTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGATTCCGGGGGAGAGTaGGCCGTGCTCCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCDSGGE*AVLLGG
Trigger: CCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAGTGCTCTTGGTGACGTaGGGGATGGACCTGCGTGCG +
Preference number: 5 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLVLLVT*GMDLRA
Trigger: CGCACGCAGGTCCATCCCCAACGTCACCAAGAGCAC...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGTGCACGCCTGTGCTCTaGGTGACGTTGGGGATGGAC +
Preference number: 5 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLECTPVL*VTLGMD
Trigger: GTCCATCCCCAACGTCACCAAGAGCACAGGCGTGCA...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCACCAAGGCTGTGGTCTaGTGCACCCGCCCCGCGCCA +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCTKAVV*CTRPAP
Trigger: TGGCGCGGGGCGGGTGCACAAGACCACAGCCTTGGT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGTGCACGCCTGTGCTCTaGGTGACGTTGGGGATGGAC +
Preference number: 5 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWCTPVL*VTLGMD
Trigger: GTCCATCCCCAACGTCACCAAGAGCACAGGCGTGCA...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTCTCCCCCGGTCCTGCTaGGCCCTCCCGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCISMYVLRFLPECIIWPLPRSC*ALPSSW
Trigger: CCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGAG...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGTTGTGAGTATGCATTaGCCGGTGTCCTTACTGACC +
Preference number: 5 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGVVSMH*PVSLLT
Trigger: GGTCAGTAAGGACACCGGCAAATGCATACTCACAAC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGGTGCTCTTGGTGACGTaGGGGATGGACCTGCGTGCG +
Preference number: 5 (lower is better)
Translates to: SFQILHPTSVNCKEQLARVLLVT*GMDLRA
Trigger: CGCACGCAGGTCCATCCCCAACGTCACCAAGAGCAC...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTCGGGCTCCTCGGAGTTaGGCCTCCCCCGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SCISMYVLRFLPECIIWPRAPRS*ASPGPA
Trigger: AGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCCG...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 90 bp TCAATAGGGTGGAGTTTTCTTAGAACCGGCTGGAGTTTGTCTTCTTaGTGCTTAAAATCCAGCTCCACACCTTCCCGATGGGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: SIGWSFLRTGWSLSS*CLKSSSTPSRWASP
Trigger: AGGAGAGGCCCATCGGGAAGGTGTGGAGCTGGATTTTAAGCAGCAAGAAGACAAACTCCAGCCGGTTCTAAGAAAACTCCACCCTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424811.2
ENST00000614311.4
CDS-3UTR CAA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGATTCCGGGGGAGAGTaGGCCGTGCTCCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GLSIVYLYVCSQILARMYDSGGE*AVLLGG
Trigger: CCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGTGCACGCCTGTGCTCTaGGTGACGTTGGGGATGGAC +
Preference number: 5 (lower is better)
Translates to: SFQILHPTSVNCKEQLARCTPVL*VTLGMD
Trigger: GTCCATCCCCAACGTCACCAAGAGCACAGGCGTGCA...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTACCAAGGCTGTGGTCTaGTGCACCCGCCCCGCGCCA +
Preference number: 5 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLTKAVV*CTRPAP
Trigger: TGGCGCGGGGCGGGTGCACAAGACCACAGCCTTGGT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAAGGCCGAGTGGAGTTTaGGAGCGCAGCTTCTCCATA +
Preference number: 5 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLRPSGV*ERSFSI
Trigger: TATGGAGAAGCTGCGCTCCAAAACTCCACTCGGCCT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATGAGGCACGATTCGTaGGCATTCTTCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSMRHDS*AFFTCS
Trigger: GCTGCAGGTGAAGAATGCCAACGAATCGTGCCTCAT...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGTTTTTAATCTGCCGGTaGGGGTCCAGGGCGTATTTC +
Preference number: 5 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLEFLICR*GSRAYF
Trigger: GAAATACGCCCTGGACCCCAACCGGCAGATTAAAAA...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAACCAAGGCTGTGGTCTaGTGCACCCGCCCCGCGCCA +
Preference number: 5 (lower is better)
Translates to: FDYVSFISDFTSHISELQTKAVV*CTRPAP
Trigger: TGGCGCGGGGCGGGTGCACAAGACCACAGCCTTGGT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAGTGTTCATGTGTTGGTaGGAATGGAAAACCAAGGCT +
Preference number: 5 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGVFMCW*EWKTKA
Trigger: AGCCTTGGTTTTCCATTCCAACCAACACATGAACAC...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAATGAGGCACGATTCGTaGGCATTCTTCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLMRHDS*AFFTCS
Trigger: GCTGCAGGTGAAGAATGCCAACGAATCGTGCCTCAT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGCTCCATCATCTGAAGTaGTGCTTTGAGGTCGACCAC +
Preference number: 5 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSLHHLK*CFEVDH
Trigger: GTGGTCGACCTCAAAGCACAACTTCAGATGATGGAG...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCAGGCATATCCTGACTTaGGGGGACTCCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCRHILT*GDSWLL
Trigger: CAGCAGCCAGGAGTCCCCCAAAGTCAGGATATGCCT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGACGCACTGTTTCTCTTaGAGATGGTCAGGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSTHCFS*RWSGLP
Trigger: TGGAAGCCCTGACCATCTCAAAGAGAAACAGTGCGT...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS TCA 90 bp AAACTCCAGTGGGTTCTAAAGACGGCCTCGAGACTCCAGACACCGTaGGTGTTAAAGGAACCAGAGTTTCCATCTTCCGTGCTTTTTAGA +
Preference number: 5 (lower is better)
Translates to: KLQWVLKTASRLQTP*VLKEPEFPSSVLFR
Trigger: TCTAAAAAGCACGGAAGATGGAAACTCTGGTTCCTTTAACACTCACGGTGTCTGGAGTCTCGAGGCCGTCTTTAGAACCCACTGGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGTGCTCTTGGTGACGTaGGGGATGGACCTGCGTGCG +
Preference number: 5 (lower is better)
Translates to: GLSIVYLYVCSQILARMYVLLVT*GMDLRA
Trigger: CGCACGCAGGTCCATCCCCAACGTCACCAAGAGCAC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCAGGCCGAGTGGAGTTTaGGAGCGCAGCTTCTCCATA +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCRPSGV*ERSFSI
Trigger: TATGGAGAAGCTGCGCTCCAAAACTCCACTCGGCCT...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGAGGCCGAGTGGAGTTTaGGAGCGCAGCTTCTCCATA +
Preference number: 5 (lower is better)
Translates to: SFQILHPTSVNCKEQLARRPSGV*ERSFSI
Trigger: TATGGAGAAGCTGCGCTCCAAAACTCCACTCGGCCT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGGCGCCTGGAGCCCGTaGAGATGTGTGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIGAWSP*RCVALL
Trigger: GAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp ACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCTTGATAATGTATTACTaGCAGATCGGGGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: TLSAMAQNACDLLVGGLSLIMYY*QIGGGG
Trigger: TCCCCCACCCCCGATCTGCAAGTAATACATTATCAA...GGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAAAGAGGATGCTAAATTaGAGGTGTCGTTGTGACACT +
Preference number: 5 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGKRMLN*RCRCDT
Trigger: AGTGTCACAACGACACCTCAAATTTAGCATCCTCTT...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGAACAAAGCATAACGAATaGTACATAACGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGTKHNE*YITSGC
Trigger: GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGT...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGGTGTTCATGTGTTGGTaGGAATGGAAAACCAAGGCT +
Preference number: 5 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSVFMCW*EWKTKA
Trigger: AGCCTTGGTTTTCCATTCCAACCAACACATGAACAC...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGAGAACCGGCTGGAGTTaGTCTTCTTGCTGCTTAAAA +
Preference number: 5 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLERTGWS*SSCCLK
Trigger: TTTTAAGCAGCAAGAAGACAAACTCCAGCCGGTTCT...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCGGTACAAAGGCCTTTTaGGTACGCAGGGCGAGAAGT +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCGTKAF*VRRARS
Trigger: ACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACC...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGCTGCCATCTCGCAGGTaGATAATGTATTACTTGCAG +
Preference number: 5 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLELPSRR*IMYYLQ
Trigger: CTGCAAGTAATACATTATCAACCTGCGAGATGGCAG...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTAAGGCGACATTGTCCCTaGGTAGCAGCTAAACTAAAC +
Preference number: 5 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLRRHCP*VAAKLN
Trigger: GTTTAGTTTAGCTGCTACCAAGGGACAATGTCGCCT...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGCCTCATTTACTGCAATaGTCTTCGGCGAGATCTCAG +
Preference number: 5 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWPHLLQ*SSARSQ
Trigger: CTGAGATCTCGCCGAAGACAATTGCAGTAAATGAGG...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS TCA 90 bp CAACTCCTGAATGACCCCCAAGAGCACTTTGATGGTTTCTTGGCTTaGACTGATCAAGTTCTCCATCATCTGAAGTTGTGCTTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: QLLNDPQEHFDGFLA*TDQVLHHLKLCFEV
Trigger: GACCTCAAAGCACAACTTCAGATGATGGAGAACTTGATCAGTTCAAGCCAAGAAACCATCAAAGTGCTCTTGGGGGTCATTCAGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGCGGAAAGAAATCTATTaGCGTGAGCCGTTATGGATT +
Preference number: 5 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSRKEIY*REPLWI
Trigger: AATCCATAACGGCTCACGCAAATAGATTTCTTTCCG...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGTGGGAGGTGCCTGAATGGGCACCACAGTTCCCTCGATCCTATTCATTTTGGATCTGTTAGAAACCCATaGTTTTGGCTTTTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: SGRCLNGHHSSLDPIHFGSVRNP*FWLLKG
Trigger: TCCCTTTAAAAGCCAAAACAATGGGTTTCTAACAGA...TCCAAAATGAATAGGATCGAGGGAACTGTGGTGCCCATTCAGGCACCTCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCCTCCATCATCTGAAGTaGTGCTTTGAGGTCGACCAC +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCLHHLK*CFEVDH
Trigger: GTGGTCGACCTCAAAGCACAACTTCAGATGATGGAG...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGATTTTTGCTTGGGAGTaGAGGAGTAAGTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWIFAWE*RSKSPE
Trigger: CTCAGGAGACTTACTCCTCAACTCCCAAGCAAAAAT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GAGGATCGATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTACTGCCATCTCGCAGGTaGATAATGTATTACTTGCAG +
Preference number: 5 (lower is better)
Translates to: EDRSTKTLSAMAQNACDLLPSRR*IMYYLQ
Trigger: CTGCAAGTAATACATTATCAACCTGCGAGATGGCAG...TAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATCGATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGGTGGATTATCCATCGAAGAGGATGCTAAATTaGAGGTGTCGTTGTGACACT +
Preference number: 5 (lower is better)
Translates to: CLPWHRMPVIYWWVDYPSKRMLN*RCRCDT
Trigger: AGTGTCACAACGACACCTCAAATTTAGCATCCTCTT...CGATGGATAATCCACCCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGAATGCCTGTGATTTATaGGTGGGTGGATTATCCATC +
Preference number: 5 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLENACDL*VGGLSI
Trigger: GATGGATAATCCACCCACCAATAAATCACAGGCATT...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCCATACAACTGCAGTGTaGTTTGGCCCCCGAAGAATG +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCHTTAV*FGPRRM
Trigger: CATTCTTCGGGGGCCAAACAACACTGCAGTTGTATG...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGAGGTTCCCCTTTTaGCGGTCCAGAGGGAACGTC +
Preference number: 5 (lower is better)
Translates to: SCISMYVLRFLPECIIWPLRFPF*RSRGNV
Trigger: GACGTTCCCTCTGGACCGCAAAAAGGGGAACCTCAA...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCTTGATAATGTATTACTaGCAGATCGGGGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCLIMYY*QIGGGG
Trigger: TCCCCCACCCCCGATCTGCAAGTAATACATTATCAA...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGAATGCCTGTGATTTATaGGTGGGTGGATTATCCATC +
Preference number: 5 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWNACDL*VGGLSI
Trigger: GATGGATAATCCACCCACCAATAAATCACAGGCATT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GATCCACAAAAACACTGTCTGCCATGGCACAGAATGCCTGTGATTTATTGGTGGACAAAGCATAACGAATaGTACATAACGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: DPQKHCLPWHRMPVIYWWTKHNE*YITSGC
Trigger: GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGT...CCACCAATAAATCACAGGCATTCTGTGCCATGGCAGACAGTGTTTTTGTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp AGGGCTTCCACCATTAATACAAAGCATAACGAATTGTACATAACGTCTGGCTGCCAACTGCAGTGTTGTTaGGCCCCCGAAGAATGTTTA +
Preference number: 5 (lower is better)
Translates to: RASTINTKHNELYITSGCQLQCC*APEECL
Trigger: TAAACATTCTTCGGGGGCCAAACAACACTGCAGTTG...GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGTATTAATGGTGGAAGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGGTTGTGAGTATGCATTaGCCGGTGTCCTTACTGACC +
Preference number: 5 (lower is better)
Translates to: VCSQILARMYYLAFGYQKVVSMH*PVSLLT
Trigger: GGTCAGTAAGGACACCGGCAAATGCATACTCACAAC...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCTTGAGGTTCCCCTTTTaGCGGTCCAGAGGGAACGTC +
Preference number: 5 (lower is better)
Translates to: LARMYYLAFGYQKIKNEILRFPF*RSRGNV
Trigger: GACGTTCCCTCTGGACCGCAAAAAGGGGAACCTCAA...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCCTGGCTGCTGGCCATTTGGAAAATGAGCAGTAAACATGTCGTAAGTCTGGAGTCTGTTAGAAACCCATaGTTTTGGCTTTTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: SWLLAIWKMSSKHVVSLESVRNP*FWLLKG
Trigger: TCCCTTTAAAAGCCAAAACAATGGGTTTCTAACAGA...CTCCAGACTTACGACATGTTTACTGCTCATTTTCCAAATGGCCAGCAGCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATATGAGGCACGATTCGTaGGCATTCTTCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLSIVYLYVCSQILARMYMRHDS*AFFTCS
Trigger: GCTGCAGGTGAAGAATGCCAACGAATCGTGCCTCAT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGAGAACCGGCTGGAGTTaGTCTTCTTGCTGCTTAAAA +
Preference number: 5 (lower is better)
Translates to: SFQILHPTSVNCKEQLARRTGWS*SSCCLK
Trigger: TTTTAAGCAGCAAGAAGACAAACTCCAGCCGGTTCT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTGGTACAAAGGCCTTTTaGGTACGCAGGGCGAGAAGT +
Preference number: 5 (lower is better)
Translates to: SCISMYVLRFLPECIIWPGTKAF*VRRARS
Trigger: ACTTCTCGCCCTGCGTACCAAAAAGGCCTTTGTACC...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTGTTGTGAGTATGCATTaGCCGGTGTCCTTACTGACC +
Preference number: 5 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLVVSMH*PVSLLT
Trigger: GGTCAGTAAGGACACCGGCAAATGCATACTCACAAC...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACAGCTGGCAAGGACAAAGCATAACGAATaGTACATAACGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SFQILHPTSVNCKEQLARTKHNE*YITSGC
Trigger: GCAGCCAGACGTTATGTACAATTCGTTATGCTTTGT...CCTTGCCAGCTGTTCTTTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATACGCACTGTTTCTCTTaGAGATGGTCAGGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GLSIVYLYVCSQILARMYTHCFS*RWSGLP
Trigger: TGGAAGCCCTGACCATCTCAAAGAGAAACAGTGCGT...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGCAACTGCAGTGTTGTTaGGCCCCCGAAGAATGTTTA +
Preference number: 5 (lower is better)
Translates to: VCSQILARMYYLAFGYQKQLQCC*APEECL
Trigger: TAAACATTCTTCGGGGGCCAAACAACACTGCAGTTG...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTCATACAACTGCAGTGTaGTTTGGCCCCCGAAGAATG +
Preference number: 5 (lower is better)
Translates to: SCISMYVLRFLPECIIWPHTTAV*FGPRRM
Trigger: CATTCTTCGGGGGCCAAACAACACTGCAGTTGTATG...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATTTTTAATCTGCCGGTaGGGGTCCAGGGCGTATTTC +
Preference number: 5 (lower is better)
Translates to: FDYVSFISDFTSHISELQFLICR*GSRAYF
Trigger: GAAATACGCCCTGGACCCCAACCGGCAGATTAAAAA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTAGGCGACATTGTCCCTaGGTAGCAGCTAAACTAAAC +
Preference number: 5 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLRRHCP*VAAKLN
Trigger: GTTTAGTTTAGCTGCTACCAAGGGACAATGTCGCCT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTATTTTTGCTTGGGAGTaGAGGAGTAAGTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SCISMYVLRFLPECIIWPIFAWE*RSKSPE
Trigger: CTCAGGAGACTTACTCCTCAACTCCCAAGCAAAAAT...AGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAATTGATAATGTATTACTaGCAGATCGGGGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: FDYVSFISDFTSHISELQLIMYY*QIGGGG
Trigger: TCCCCCACCCCCGATCTGCAAGTAATACATTATCAA...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGGCGACATTGTCCCTaGGTAGCAGCTAAACTAAAC +
Preference number: 5 (lower is better)
Translates to: FDYVSFISDFTSHISELQRRHCP*VAAKLN
Trigger: GTTTAGTTTAGCTGCTACCAAGGGACAATGTCGCCT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCGTGTTCATGTGTTGGTaGGAATGGAAAACCAAGGCT +
Preference number: 5 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIVFMCW*EWKTKA
Trigger: AGCCTTGGTTTTCCATTCCAACCAACACATGAACAC...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTCACTGTGTTCATGTGTaGGTTGGAATGGAAAACCAA +
Preference number: 5 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLHCVHV*VGMENQ
Trigger: TTGGTTTTCCATTCCAACCAACACATGAACACAGTG...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp TTTGACTACGTAAGTTTCATTTCAGATTTTACATCCCACATCAGTGAACTGCAAAGAACCGGCTGGAGTTaGTCTTCTTGCTGCTTAAAA +
Preference number: 5 (lower is better)
Translates to: FDYVSFISDFTSHISELQRTGWS*SSCCLK
Trigger: TTTTAAGCAGCAAGAAGACAAACTCCAGCCGGTTCT...TTGCAGTTCACTGATGTGGGATGTAAAATCTGAAATGAAACTTACGTAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCTGCCATCTCGCAGGTaGATAATGTATTACTTGCAG +
Preference number: 5 (lower is better)
Translates to: LARMYYLAFGYQKIKNEILPSRR*IMYYLQ
Trigger: CTGCAAGTAATACATTATCAACCTGCGAGATGGCAG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTAAGAGGATGCTAAATTaGAGGTGTCGTTGTGACACT +
Preference number: 5 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLKRMLN*RCRCDT
Trigger: AGTGTCACAACGACACCTCAAATTTAGCATCCTCTT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GGATTATCCATCGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATGCCAGAATGTATTATTaGGCCTTTGGGTACCAAAAG +
Preference number: 5 (lower is better)
Translates to: GLSIVYLYVCSQILARMYARMYY*AFGYQK
Trigger: CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGC...ATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACGATGGATAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTAATGCCTGTGATTTATaGGTGGGTGGATTATCCATC +
Preference number: 5 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLNACDL*VGGLSI
Trigger: GATGGATAATCCACCCACCAATAAATCACAGGCATT...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CGTGTATCTCTATGTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTCCTGTGCGTTTTACCTaGCTTTTGTATCAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: RVSLCMFSDSCQNVLFGLPVRFT*LLYQRF
Trigger: AAAACGCTGATACAAAAGCAAGGTAAAACGCACAGG...AAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATACATAGAGATACACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCGGAAAGAAATCTATTaGCGTGAGCCGTTATGGATT +
Preference number: 5 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIRKEIY*REPLWI
Trigger: AATCCATAACGGCTCACGCAAATAGATTTCTTTCCG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp GTATGTTCTCAGATTCTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGTCTGTTAGAAACCCATaGTTTTGGCTTTTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: VCSQILARMYYLAFGYQKSVRNP*FWLLKG
Trigger: TCCCTTTAAAAGCCAAAACAATGGGTTTCTAACAGA...CTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAGAATCTGAGAACATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS-3UTR CAA 90 bp CTTGCCAGAATGTATTATTTGGCCTTTGGGTACCAAAAGATTAAAAATGAGATCCACTGTGTTCATGTGTaGGTTGGAATGGAAAACCAA +
Preference number: 5 (lower is better)
Translates to: LARMYYLAFGYQKIKNEIHCVHV*VGMENQ
Trigger: TTGGTTTTCCATTCCAACCAACACATGAACACAGTG...GATCTCATTTTTAATCTTTTGGTACCCAAAGGCCAAATAATACATTCTGGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp CGCGCTCACGCGGAGGAAGCCTCGGCTCCGGGGACTTaGCCCGCTGCGCGCCTGCTGCCCGCCCCCTCCACC +
Preference number: 6 (lower is better)
Translates to: RAHAEEASAPGT*PAARLLPAPST
Trigger: GGTGGAGGGGGCGGGCAGCAGGCGCGCAGCGGGCCAAGTCCCCGGAGCCGAGGCTTCCTCCGCGTGAGCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS CCA 72 bp GGCTCGGGCATGTCTCGCTGCGGACCCTGGCAAGCCTaGGGCGGCACGGAGCACTCCGGACAGGGCATCCGC +
Preference number: 6 (lower is better)
Translates to: GSGMSRCGPWQA*GGTEHSGQGIR
Trigger: GCGGATGCCCTGTCCGGAGTGCTCCGTGCCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp GCAGCGCCTGGCTCGGGCATGTCTCGCTGCGGACCCTaGCAAGCCTGGGGCGGCACGGAGCACTCCGGACAG +
Preference number: 6 (lower is better)
Translates to: AAPGSGMSRCGP*QAWGGTEHSGQ
Trigger: CTGTCCGGAGTGCTCCGTGCCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp GAGGTCGATGCAGCGCCTGGCTCGGGCATGTCTCGCTaGGGACCCTGGCAAGCCTGGGGCGGCACGGAGCAC +
Preference number: 6 (lower is better)
Translates to: EVDAAPGSGMSR*GPWQAWGGTEH
Trigger: GTGCTCCGTGCCGCCCCAGGCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp CGGGCTCCTCGGAGTTTGGCCTCCCCCGGTCCTGCTTaGCCCTCCCGAGCAGCTGGTAATCGGGCTCTTCGG +
Preference number: 6 (lower is better)
Translates to: RAPRSLASPGPA*PSRAAGNRALR
Trigger: CCGAAGAGCCCGATTACCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGAGGCCAAACTCCGAGGAGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp GGGGGTGAGCAGGCCAGGGCAGTTTCCGAGGGCGCCTaGAGCCCGTTGAGATGTGTGGCTCTCCTCCGCTCG +
Preference number: 6 (lower is better)
Translates to: GGEQARAVSEGA*SPLRCVALLRS
Trigger: CGAGCGGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCCCTCGGAAACTGCCCTGGCCTGCTCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 90 bp GGGGGTGAGCAGGCCAGGGCAGTTTCCGAGGGCGCCTGGAGCCCGTaGAGATGTGTGGCTCTCCTCCGCTCGTCATCTGCCGGGCAGAGT +
Preference number: 6 (lower is better)
Translates to: GGEQARAVSEGAWSP*RCVALLRSSSAGQS
Trigger: ACTCTGCCCGGCAGATGACGAGCGGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCCCTCGGAAACTGCCCTGGCCTGCTCACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp CAAGGCTGTGGTCTTGTGCACCCGCCCCGCGCCACATaGCCGGGCCTCCTCCATGGGTCCAGCCTCGTTCTT +
Preference number: 6 (lower is better)
Translates to: QGCGLVHPPRAT*PGLLHGSSLVL
Trigger: AAGAACGAGGCTGGACCCATGGAGGAGGCCCGGCCATGTGGCGCGGGGCGGGTGCACAAGACCACAGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS TCA 72 bp AGGCCAGGGCAGTTTCCGAGGGCGCCTGGAGCCCGTTaGGATGTGTGGCTCTCCTCCGCTCGTCATCTGCCG +
Preference number: 6 (lower is better)
Translates to: RPGQFPRAPGAR*DVWLSSARHLP
Trigger: CGGCAGATGACGAGCGGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCCCTCGGAAACTGCCCTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 72 bp CAGGCCAGGGCAGTTTCCGAGGGCGCCTGGAGCCCGTaGAGATGTGTGGCTCTCCTCCGCTCGTCATCTGCC +
Preference number: 6 (lower is better)
Translates to: QARAVSEGAWSP*RCVALLRSSSA
Trigger: GGCAGATGACGAGCGGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCCCTCGGAAACTGCCCTGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp TGCGACGGCTGCTCACTACATTCGGGGGACAGGCACTaGATCGGGGGTGAGCAGGCCAGGGCAGTTTCCGAG +
Preference number: 6 (lower is better)
Translates to: CDGCSLHSGDRH*IGGEQARAVSE
Trigger: CTCGGAAACTGCCCTGGCCTGCTCACCCCCGATGCAGTGCCTGTCCCCCGAATGTAGTGAGCAGCCGTCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp TGTATTTGCGGTAGGCTGCTCTGCAGGACACGGGCTTaGCCTCCCGCTTCTCCCCCAGCTGGCCCGAGGACA +
Preference number: 6 (lower is better)
Translates to: CICGRLLCRTRA*PPASPPAGPRT
Trigger: TGTCCTCGGGCCAGCTGGGGGAGAAGCGGGAGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp GGCAACCTCCGTTTTAAACACCCTCCTGAGGGCAGGTaGAGCGGGCTCCTCGGAGTTTGGCCTCCCCCGGTC +
Preference number: 6 (lower is better)
Translates to: GNLRFKHPPEGR*SGLLGVWPPPV
Trigger: GACCGGGGGAGGCCAAACTCCGAGGAGCCCGCTCCACCTGCCCTCAGGAGGGTGTTTAAAACGGAGGTTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 90 bp CAGCCACCCGGCTTCGCGCTCCTCCGATGTCCTCATTTACTGCAATaGTCTTCGGCGAGATCTCAGAGCCAGGGCCAGGAGGCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: QPPGFALLRCPHLLQ*SSARSQSQGQEAGA
Trigger: CGCCCCCGCCTCCTGGCCCTGGCTCTGAGATCTCGCCGAAGACAATTGCAGTAAATGAGGACATCGGAGGAGCGCGAAGCCGGGTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS TCA 72 bp CGGGGGAGAGTTGGCCGTGCTCCTGGGTGGGAACCGTaGAGGAGAAGTCGTCGAGGGGTGGTCGCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: RGRVGRAPGWEP*RRSRRGVVASH
Trigger: ATGAGAAGCGACCACCCCTCGACGACTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp GTGCGGGCACTGTCATGTATTTGCGGTAGGCTGCTCTaGAGGACACGGGCTTGGCCTCCCGCTTCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: VRALSCICGRLL*RTRAWPPASPP
Trigger: TGGGGGAGAAGCGGGAGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATACATGACAGTGCCCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp CCTGCGTGCGGGCACTGTCATGTATTTGCGGTAGGCTaGTCTGCAGGACACGGGCTTGGCCTCCCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PACGHCHVFAVG*SAGHGLGLPLL
Trigger: GAGAAGCGGGAGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATACATGACAGTGCCCGCACGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp GGCCCTCCCGAGCAGCTGGTAATCGGGCTCTTCGGATaGAGGCCGAGTGGAGTTTTGGAGCGCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GPPEQLVIGLFG*RPSGVLERSFS
Trigger: GGAGAAGCTGCGCTCCAAAACTCCACTCGGCCTCCATCCGAAGAGCCCGATTACCAGCTGCTCGGGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp CGCTGCTTACAGATAAGTCGAGGTCGATGCAGCGCCTaGCTCGGGCATGTCTCGCTGCGGACCCTGGCAAGC +
Preference number: 6 (lower is better)
Translates to: RCLQISRGRCSA*LGHVSLRTLAS
Trigger: GCTTGCCAGGGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACCTCGACTTATCTGTAAGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS TCA 72 bp CAGAGTCTGACAAACCAGGCTCGGGGGCCCTGGCACTaGGGGCAGGTGCGTAAACGGTGGCAACCTCCGTTT +
Preference number: 6 (lower is better)
Translates to: QSLTNQARGPWH*GQVRKRWQPPF
Trigger: AAACGGAGGTTGCCACCGTTTACGCACCTGCCCTCAGTGCCAGGGCCCCCGAGCCTGGTTTGTCAGACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp TGGGGATGGACCTGCGTGCGGGCACTGTCATGTATTTaGGGTAGGCTGCTCTGCAGGACACGGGCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: WGWTCVRALSCI*GRLLCRTRAWP
Trigger: AGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATACATGACAGTGCCCGCACGCAGGTCCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp CGTGAGCCGTTATGGATTCCGGGGGAGAGTTGGCCGTaGTCCTGGGTGGGAACCGTGAAGGAGAAGTCGTCG +
Preference number: 6 (lower is better)
Translates to: REPLWIPGESWP*SWVGTVKEKSS
Trigger: CGACGACTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp CCGTTATGGATTCCGGGGGAGAGTTGGCCGTGCTCCTaGGTGGGAACCGTGAAGGAGAAGTCGTCGAGGGGT +
Preference number: 6 (lower is better)
Translates to: PLWIPGESWPCS*VGTVKEKSSRG
Trigger: ACCCCTCGACGACTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CAA 72 bp TCGGGCGAGGTCTGCACGCCTGTGCTCTTGGTGACGTaGGGGATGGACCTGCGTGCGGGCACTGTCATGTAT +
Preference number: 6 (lower is better)
Translates to: SGEVCTPVLLVT*GMDLRAGTVMY
Trigger: ATACATGACAGTGCCCGCACGCAGGTCCATCCCCAACGTCACCAAGAGCACAGGCGTGCAGACCTCGCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 72 bp TTCTTAAGGTCGGGCGAGGTCTGCACGCCTGTGCTCTaGGTGACGTTGGGGATGGACCTGCGTGCGGGCACT +
Preference number: 6 (lower is better)
Translates to: FLRSGEVCTPVL*VTLGMDLRAGT
Trigger: AGTGCCCGCACGCAGGTCCATCCCCAACGTCACCAAGAGCACAGGCGTGCAGACCTCGCCCGACCTTAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp AGGATCTTCCGCTGCTTACAGATAAGTCGAGGTCGATaGAGCGCCTGGCTCGGGCATGTCTCGCTGCGGACC +
Preference number: 6 (lower is better)
Translates to: RIFRCLQISRGR*SAWLGHVSLRT
Trigger: GGTCCGCAGCGAGACATGCCCGAGCCAGGCGCTGCATCGACCTCGACTTATCTGTAAGCAGCGGAAGATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CAA 72 bp GTAATCGGGCTCTTCGGATGGAGGCCGAGTGGAGTTTaGGAGCGCAGCTTCTCCATAGCTGAGCGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: VIGLFGWRPSGV*ERSFSIAERLR
Trigger: CCGGAGCCGCTCAGCTATGGAGAAGCTGCGCTCCAAAACTCCACTCGGCCTCCATCCGAAGAGCCCGATTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 90 bp ACTGTGTTCATGTGTTGGTTGGAATGGAAAACCAAGGCTGTGGTCTaGTGCACCCGCCCCGCGCCACATGGCCGGGCCTCCTCCATGGGT +
Preference number: 6 (lower is better)
Translates to: TVFMCWLEWKTKAVV*CTRPAPHGRASSMG
Trigger: ACCCATGGAGGAGGCCCGGCCATGTGGCGCGGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCCATTCCAACCAACACATGAACACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp GCCTGTGCTCTTGGTGACGTTGGGGATGGACCTGCGTaGGGGCACTGTCATGTATTTGCGGTAGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: ACALGDVGDGPA*GHCHVFAVGCS
Trigger: AGAGCAGCCTACCGCAAATACATGACAGTGCCCGCACGCAGGTCCATCCCCAACGTCACCAAGAGCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp CACCCGGCTTCGCGCTCCTCCGATGTCCTCATTTACTaGAATTGTCTTCGGCGAGATCTCAGAGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: HPASRSSDVLIY*NCLRRDLRARA
Trigger: GGCCCTGGCTCTGAGATCTCGCCGAAGACAATTGCAGTAAATGAGGACATCGGAGGAGCGCGAAGCCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS CCA 72 bp TGTTCATGTGTTGGTTGGAATGGAAAACCAAGGCTGTaGTCTTGTGCACCCGCCCCGCGCCACATGGCCGGG +
Preference number: 6 (lower is better)
Translates to: CSCVGWNGKPRL*SCAPAPRHMAG
Trigger: CCCGGCCATGTGGCGCGGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCCATTCCAACCAACACATGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 90 bp CAGGCGGCGGGTTCCACTTCACTCTCCGACGTTGTGAGTATGCATTaGCCGGTGTCCTTACTGACCATGGTTCTGGAGCTGCCACGTCTC +
Preference number: 6 (lower is better)
Translates to: QAAGSTSLSDVVSMH*PVSLLTMVLELPRL
Trigger: GAGACGTGGCAGCTCCAGAACCATGGTCAGTAAGGACACCGGCAAATGCATACTCACAACGTCGGAGAGTGAAGTGGAACCCGCCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp TATTTGCGTGAGCCGTTATGGATTCCGGGGGAGAGTTaGCCGTGCTCCTGGGTGGGAACCGTGAAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: YLREPLWIPGES*PCSWVGTVKEK
Trigger: CTTCTCCTTCACGGTTCCCACCCAGGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACGCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CAA 72 bp GGCTTCGCGCTCCTCCGATGTCCTCATTTACTGCAATaGTCTTCGGCGAGATCTCAGAGCCAGGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: GFALLRCPHLLQ*SSARSQSQGQE
Trigger: CTCCTGGCCCTGGCTCTGAGATCTCGCCGAAGACAATTGCAGTAAATGAGGACATCGGAGGAGCGCGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS GCA 72 bp TTCCGTATGAGGCACGATTCGTTGGCATTCTTCACCTaGAGCAACCGCTGTGGGACTAGGCTGGTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: FRMRHDSLAFFT*SNRCGTRLVPQ
Trigger: CTGGGGAACCAGCCTAGTCCCACAGCGGTTGCTGCAGGTGAAGAATGCCAACGAATCGTGCCTCATACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS GCA 72 bp GCACTGTTCCTGCATGTGTCACAATTAGCTGTGTCTTaGCCCGTCCGATATGAAAGCCCTTCCCGATGGGCC +
Preference number: 6 (lower is better)
Translates to: ALFLHVSQLAVS*PVRYESPSRWA
Trigger: GGCCCATCGGGAAGGGCTTTCATATCGGACGGGGCAAGACACAGCTAATTGTGACACATGCAGGAACAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS CAA 90 bp GATAAATGTGGAGAGCCCTCCGAGGAGGAACGGAAAGAAATCTATTaGCGTGAGCCGTTATGGATTCCGGGGGAGAGTTGGCCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: DKCGEPSEEERKEIY*REPLWIPGESWPCS
Trigger: GGAGCACGGCCAACTCTCCCCCGGAATCCATAACGGCTCACGCAAATAGATTTCTTTCCGTTCCTCCTCGGAGGGCTCTCCACATTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp AAAGGCTGGTCCACTGTGTTCATGTGTTGGTTGGAATaGAAAACCAAGGCTGTGGTCTTGTGCACCCGCCCC +
Preference number: 6 (lower is better)
Translates to: KGWSTVFMCWLE*KTKAVVLCTRP
Trigger: GGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCCATTCCAACCAACACATGAACACAGTGGACCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 72 bp TTTGAGGTCGACCACTTCCGTATGAGGCACGATTCGTaGGCATTCTTCACCTGCAGCAACCGCTGTGGGACT +
Preference number: 6 (lower is better)
Translates to: FEVDHFRMRHDS*AFFTCSNRCGT
Trigger: AGTCCCACAGCGGTTGCTGCAGGTGAAGAATGCCAACGAATCGTGCCTCATACGGAAGTGGTCGACCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CAA 90 bp AAGTTGTGCTTTGAGGTCGACCACTTCCGTATGAGGCACGATTCGTaGGCATTCTTCACCTGCAGCAACCGCTGTGGGACTAGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: KLCFEVDHFRMRHDS*AFFTCSNRCGTRLV
Trigger: AACCAGCCTAGTCCCACAGCGGTTGCTGCAGGTGAAGAATGCCAACGAATCGTGCCTCATACGGAAGTGGTCGACCTCAAAGCACAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS TCA 72 bp AGCCCTTCCCGATGGGCCTCTCCTTTTTCCAACTCCTaGATGACCCCCAAGAGCACTTTGATGGTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: SPSRWASPFSNS*MTPKSTLMVSW
Trigger: CCAAGAAACCATCAAAGTGCTCTTGGGGGTCATTCAGGAGTTGGAAAAAGGAGAGGCCCATCGGGAAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522781.6
CDS CAA 72 bp GGTTCCACTTCACTCTCCGACGTTGTGAGTATGCATTaGCCGGTGTCCTTACTGACCATGGTTCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GSTSLSDVVSMH*PVSLLTMVLEL
Trigger: CAGCTCCAGAACCATGGTCAGTAAGGACACCGGCAAATGCATACTCACAACGTCGGAGAGTGAAGTGGAACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS TCA 72 bp ACACCTTCCCGATGGGCCTCTCCTTTTTCCAACTCCTaGATGACCCCCAAGAGCACTTTGATGGTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: TPSRWASPFSNS*MTPKSTLMVSW
Trigger: CCAAGAAACCATCAAAGTGCTCTTGGGGGTCATTCAGGAGTTGGAAAAAGGAGAGGCCCATCGGGAAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424811.2
ENST00000614311.4
CDS TCA 72 bp TGGGTTCTAAAGACGGCCTCGAGACTCCAGACACCGTaGGTGTTAAAGGAACCAGAGTTTCCATCTTCCGTG +
Preference number: 6 (lower is better)
Translates to: WVLKTASRLQTP*VLKEPEFPSSV
Trigger: CACGGAAGATGGAAACTCTGGTTCCTTTAACACTCACGGTGTCTGGAGTCTCGAGGCCGTCTTTAGAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp TTGACCCCCAAAGGCTGGTCCACTGTGTTCATGTGTTaGTTGGAATGGAAAACCAAGGCTGTGGTCTTGTGC +
Preference number: 6 (lower is better)
Translates to: LTPKGWSTVFMC*LEWKTKAVVLC
Trigger: GCACAAGACCACAGCCTTGGTTTTCCATTCCAACCAACACATGAACACAGTGGACCAGCCTTTGGGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp GTGAAGGAGAAGTCGTCGAGGGGTGGTCGCTTCTCATaGGTTAACATCAGCTCTAAAAGGAACGTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: VKEKSSRGGRFS*VNISSKRNVGF
Trigger: GAAACCCACGTTCCTTTTAGAGCTGATGTTAACCCATGAGAAGCGACCACCCCTCGACGACTTCTCCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522781.6
ENST00000614311.4
CDS CAA 72 bp GTTGACCCCCAAAGGCTGGTCCACTGTGTTCATGTGTaGGTTGGAATGGAAAACCAAGGCTGTGGTCTTGTG +
Preference number: 6 (lower is better)
Translates to: VDPQRLVHCVHV*VGMENQGCGLV
Trigger: CACAAGACCACAGCCTTGGTTTTCCATTCCAACCAACACATGAACACAGTGGACCAGCCTTTGGGGGTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4
CDS CCA 72 bp CTTTTACAGGGCTCTGTGCAGTTGACCCCCAAAGGCTaGTCCACTGTGTTCATGTGTTGGTTGGAATGGAAA +
Preference number: 6 (lower is better)
Translates to: LLQGSVQLTPKG*STVFMCWLEWK
Trigger: TTTCCATTCCAACCAACACATGAACACAGTGGACCAGCCTTTGGGGGTCAACTGCACAGAGCCCTGTAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424811.2
ENST00000522781.6
ENST00000614311.4