RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INSYN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000205363

Ensembl transcript IDs: ENST00000558834.1, ENST00000559817.1, ENST00000569673.3

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAAGTGACGCAGGGCCTGGCCAGACTGATGCCACCCCCAGGCCCTaGGTCCTGCAGTCTCCAGACCACCCCGACTGTGAACCCTGGCCT +
Preference number: 1 (lower is better)
Translates to: ASDAGPGQTDATPRP*VLQSPDHPDCEPWP
Trigger: AGGCCAGGGTTCACAGTCGGGGTGGTCTGGAGACTGCAGGACTCAGGGCCTGGGGGTGGCATCAGTCTGGCCAGGCCCTGCGTCACTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp GCTCAGGGGCTGGGTGTGGAGACATCGGGACGGAGTGGGGACCACTaGGCTCCTTTCCAAGGCTGCCCACCTGGTGAAGGTGGCCAGGAG +
Preference number: 1 (lower is better)
Translates to: AQGLGVETSGRSGDH*APFQGCPPGEGGQE
Trigger: CTCCTGGCCACCTTCACCAGGTGGGCAGCCTTGGAAAGGAGCCCAGTGGTCCCCACTCCGTCCCGATGTCTCCACACCCAGCCCCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp ACGCAGGGCCTGGCCAGACTGATGCCACCCCCAGGCCCTGAGTCCTaGAGTCTCCAGACCACCCCGACTGTGAACCCTGGCCTAAAGGGA +
Preference number: 1 (lower is better)
Translates to: TQGLARLMPPPGPES*SLQTTPTVNPGLKG
Trigger: TCCCTTTAGGCCAGGGTTCACAGTCGGGGTGGTCTGGAGACTGCAGGACTCAGGGCCTGGGGGTGGCATCAGTCTGGCCAGGCCCTGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp CTCCAATCAAACCCCTGCCCAGCCCAGGCGATCCTTCAGGCTCTGTaGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: LQSNPCPAQAILQAL*MPSIPARRPAPWEQ
Trigger: CTGCTCCCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGATCGCCTGGGCTGGGCAGGGGTTTGATTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp GATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGAGCAGCTTaGCATTCCCCTATGTCCCAGGCAACCCTAAGATGGAAGGGGGTG +
Preference number: 1 (lower is better)
Translates to: DAQHPSTEACAMGAA*HSPMSQATLRWKGV
Trigger: CACCCCCTTCCATCTTAGGGTTGCCTGGGACATAGGGGAATGGCAAGCTGCTCCCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTaGCCACACCTCCTGGGACCTAGGAGGCCAATGGGCATCTTCATG +
Preference number: 1 (lower is better)
Translates to: TPFRSPAMRTEEGQS*PHLLGPRRPMGIFM
Trigger: CATGAAGATGCCCATTGGCCTCCTAGGTCCCAGGAGGTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp GAGCTGAAAGGATTGGGGGTGGTCCAGACCCTCCAATCAAACCCCTaGCCAGCCCAGGCGATCCTTCAGGCTCTGTGGATGCCCAGCATC +
Preference number: 1 (lower is better)
Translates to: ELKGLGVVQTLQSNP*PAQAILQALWMPSI
Trigger: GATGCTGGGCATCCACAGAGCCTGAAGGATCGCCTGGGCTGGGCAGGGGTTTGATTGGAGGGTCTGGACCACCCCCAATCCTTTCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp TCCAGACCGGCCTGTACAATCTCACTGTATGTCCACAGCCGGGGCTaGATAGCACCTCTTCAGGCAGGAGCAGTGGGTGCTGCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: SRPACTISLYVHSRG*IAPLQAGAVGAARP
Trigger: AGGCCTGGCAGCACCCACTGCTCCTGCCTGAAGAGGTGCTATCCAGCCCCGGCTGTGGACATACAGTGAGATTGTACAGGCCGGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp AGCTGGCCATGGCCTGCGCCATCCCTGGATTTCCACACTGGTGGCTaGACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTT +
Preference number: 1 (lower is better)
Translates to: SWPWPAPSLDFHTGG*TLANSLGLQSHHEL
Trigger: AAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCCACCAGTGTGGAAATCCAGGGATGGCGCAGGCCATGGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp GCCATCCCACTCAAAGCCCCTGTGCCCTGGAAATCACTGGACATCTaGGTTGAGGCCACACTGACCACAAGGCATGTCCAGTGCCTTCAG +
Preference number: 1 (lower is better)
Translates to: AIPLKAPVPWKSLDI*VEATLTTRHVQCLQ
Trigger: CTGAAGGCACTGGACATGCCTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAGTGGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp CTGCAGTCAACTTCTGACCTCGAGCTACTGCGAGGGACCAAGCAATaGAGTGTTTGTGACCCAGGGGTGGCTCCCAGTTGGATGGAGGTG +
Preference number: 1 (lower is better)
Translates to: LQSTSDLELLRGTKQ*SVCDPGVAPSWMEV
Trigger: CACCTCCATCCAACTGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCTCGAGGTCAGAAGTTGACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp AGGGGCTGTGAATCAAGCTGCAGTCAACTTCTGACCTCGAGCTACTaGGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTC +
Preference number: 1 (lower is better)
Translates to: RGCESSCSQLLTSSY*EGPSNGVFVTQGWL
Trigger: GAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCTCGAGGTCAGAAGTTGACTGCAGCTTGATTCACAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp TGGACATTAGCCACTACTACAGAGTCACATAGAGCCAGTGTGGGGTaGAGGATCCCATGGCTGTGTCAGAGACCCCTAGCTCTGGCCCTC +
Preference number: 1 (lower is better)
Translates to: WTLATTTESHRASVG*RIPWLCQRPLALAL
Trigger: GAGGGCCAGAGCTAGGGGTCTCTGACACAGCCATGGGATCCTGCACCCCACACTGGCTCTATGTGACTCTGTAGTAGTGGCTAATGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTaGCTCCCAGTTGGATGGAGGTGTCTTCTTTGGCCATCCCACTCA +
Preference number: 1 (lower is better)
Translates to: SYCEGPSNGVFVTQG*LPVGWRCLLWPSHS
Trigger: TGAGTGGGATGGCCAAAGAAGACACCTCCATCCAACTGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 90 bp CCCACTCAAAGCCCCTGTGCCCTGGAAATCACTGGACATCTGGGTTaGGGCCACACTGACCACAAGGCATGTCCAGTGCCTTCAGTTTGT +
Preference number: 1 (lower is better)
Translates to: PTQSPCALEITGHLG*GHTDHKACPVPSVC
Trigger: ACAAACTGAAGGCACTGGACATGCCTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp CCTCCTAGGTCTGCTCAGTCTTATCCAGATCATATCCCCTGCAGCTaGTCCAGACCGGCCTGTACAATCTCACTGTATGTCCACAGCCGG +
Preference number: 1 (lower is better)
Translates to: PPRSAQSYPDHIPCS*SRPACTISLYVHSR
Trigger: CCGGCTGTGGACATACAGTGAGATTGTACAGGCCGGTCTGGAGCAGCTGCAGGGGATATGATCTGGATAAGACTGAGCAGACCTAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp ATGGAGGTGTCTTCTTTGGCCATCCCACTCAAAGCCCCTGTGCCCTaGAAATCACTGGACATCTGGGTTGAGGCCACACTGACCACAAGG +
Preference number: 1 (lower is better)
Translates to: MEVSSLAIPLKAPVP*KSLDIWVEATLTTR
Trigger: CCTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAGTGGGATGGCCAAAGAAGACACCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp ACTACTACAGAGTCACATAGAGCCAGTGTGGGGTGCAGGATCCCATaGCTGTGTCAGAGACCCCTAGCTCTGGCCCTCAGTTTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: TTTESHRASVGCRIP*LCQRPLALALSFFL
Trigger: GAGGAAGAAACTGAGGGCCAGAGCTAGGGGTCTCTGACACAGCCATGGGATCCTGCACCCCACACTGGCTCTATGTGACTCTGTAGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 90 bp CCCCTGTGCCCTGGAAATCACTGGACATCTGGGTTGAGGCCACACTaGCCACAAGGCATGTCCAGTGCCTTCAGTTTGTCAAGTGCTTTC +
Preference number: 1 (lower is better)
Translates to: PLCPGNHWTSGLRPH*PQGMSSAFSLSSAF
Trigger: GAAAGCACTTGACAAACTGAAGGCACTGGACATGCCTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp GCAGAGCCTCCTAGGTCTGCTCAGTCTTATCCAGATCATATCCCCTaGAGCTGCTCCAGACCGGCCTGTACAATCTCACTGTATGTCCAC +
Preference number: 1 (lower is better)
Translates to: AEPPRSAQSYPDHIP*SCSRPACTISLYVH
Trigger: GTGGACATACAGTGAGATTGTACAGGCCGGTCTGGAGCAGCTGCAGGGGATATGATCTGGATAAGACTGAGCAGACCTAGGAGGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp TGCCCAGTGCCTAGCACGTGCCCAGTGGACATGAGTTATTCATCATaGTATGACTTCTCTCCATCACCAGGTTCCAGCTCCCTTCTGCCC +
Preference number: 1 (lower is better)
Translates to: CPVPSTCPVDMSYSS*YDFSPSPGSSSLLP
Trigger: GGGCAGAAGGGAGCTGGAACCTGGTGATGGAGAGAAGTCATAGCATGATGAATAACTCATGTCCACTGGGCACGTGCTAGGCACTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp CTGGACATCTGGGTTGAGGCCACACTGACCACAAGGCATGTCCAGTaGCTTCAGTTTGTCAAGTGCTTTCACAGTCACCATCTCGTCGGA +
Preference number: 1 (lower is better)
Translates to: LDIWVEATLTTRHVQ*LQFVKCFHSHHLVG
Trigger: TCCGACGAGATGGTGACTGTGAAAGCACTTGACAAACTGAAGGCACTGGACATGCCTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 90 bp TCCCACTCCACTGTCAGGAGGTCCAGACTGGGTGTAGCAAAATTGTaGAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: SHSTVRRSRLGVAKL*SQPSTTYIPLPPPP
Trigger: TGGAGGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACACCCAGTCTGGACCTCCTGACAGTGGAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp GTGTCTACCCCAAGGACAGGGAGCTCACTACCCAGAAGCAGCCCATaGCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCT +
Preference number: 1 (lower is better)
Translates to: VSTPRTGSSLPRSSP*HDSAVLKVRILSIP
Trigger: AGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGGGCTGCTTCTGGGTAGTGAGCTCCCTGTCCTTGGGGTAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 90 bp GGAGCTCACTACCCAGAAGCAGCCCATGCCATGACTCAGCAGTGTTaGAAGTCAGAATTCTCTCTATCCCTAGCTGGCCACATTTTGTGT +
Preference number: 1 (lower is better)
Translates to: GAHYPEAAHAMTQQC*KSEFSLSLAGHILC
Trigger: ACACAAAATGTGGCCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGGGCTGCTTCTGGGTAGTGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 90 bp GCAGAGAGATCTGATGGAACATCCTGGGTAAAGAAACTCAAAAACTaGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCT +
Preference number: 1 (lower is better)
Translates to: AERSDGTSWVKKLKN*QRFGGREEQQRAVP
Trigger: AGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATCAGATCTCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 90 bp GCTGTGTCAGAGACCCCTAGCTCTGGCCCTCAGTTTCTTCCTCTGTaGAATGCGAACTATTCCATAGGTTTCTTTTCCCTGACTGTTGAA +
Preference number: 1 (lower is better)
Translates to: AVSETPSSGPQFLPL*NANYSIGFFSLTVE
Trigger: TTCAACAGTCAGGGAAAAGAAACCTATGGAATAGTTCGCATTTCACAGAGGAAGAAACTGAGGGCCAGAGCTAGGGGTCTCTGACACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTaGTGTCCCTGTGCTGGCCATGCCCCAGATGAAGCCCTGGTACCT +
Preference number: 1 (lower is better)
Translates to: NVSNIIVIIIPRIFS*CPCAGHAPDEALVP
Trigger: AGGTACCAGGGCTTCATCTGGGGCATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 90 bp GGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGAGCAGCTaGCCATTCCCCTATGTCCCAGGCAACCCTAAGATGGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: GCPASQHGGLRHGSS*PFPYVPGNPKMEGG
Trigger: ACCCCCTTCCATCTTAGGGTTGCCTGGGACATAGGGGAATGGCAAGCTGCTCCCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGTCAGGAGCCCCGCAATaGGAACGGAGGAAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: ILQALWMPSIPARRPAPWSGAPQ*ERRKGS
Trigger: ACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGA...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGCCTGCCCACACCTCCTaGGACCTAGGAGGCCAATGG +
Preference number: 2 (lower is better)
Translates to: AAYFLAQISGLLRATPGLPAHTS*DLGGQW
Trigger: CCATTGGCCTCCTAGGTCCCAGGAGGTGTGGGCAGG...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCATTAGAGCCCGCCTCCTaGAGGGGAGTCCCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPLEPAS*RGVPSR
Trigger: CCTAGAGGGGACTCCCCTGCAGGAGGCGGGCTCTAA...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCCCCAGCACGGAGGCCTaGGCCATGGGAGCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLPSTEA*AMGAAC
Trigger: GCAAGCTGCTCCCATGGCGCAGGCCTCCGTGCTGGG...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTaGGTTCTCAGACGTGAGCTGGGAAGAGCTGGCCATGGCCTGCGC +
Preference number: 2 (lower is better)
Translates to: QMAEDFLGLIEGLRP*VLRRELGRAGHGLR
Trigger: GCGCAGGCCATGGCCAGCTCTTCCCAGCTCACGTCTGAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCGATGGTGGGTGCAAGTaGCGCAGGGCCTGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLDGGCK*RRAWPD
Trigger: GTCTGGCCAGGCCCTGCGTCACTTGCACCCACCATC...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTCACGCCAGGACTGGCTaGGGCTTTGCCCTGAGGTTT +
Preference number: 2 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGHARTG*GFALRF
Trigger: AAACCTCAGGGCAAAGCCTCAGCCAGTCCTGGCGTG...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACAAGCTTTGGGGCCTGTaGGGCCAGATCCTTAGCATT +
Preference number: 2 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHKLWGL*GQILSI
Trigger: AATGCTAAGGATCTGGCCCCACAGGCCCCAAAGCTT...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAAAGGAGCAGTGGGTGCTaGCAGGCCTGCTGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: GCTLANSLGLQSHHELEERSSGC*QACCSG
Trigger: GCCTGAGCAGCAGGCCTGGCAGCACCCACTGCTCCT...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGCGGAGGCCTGCGCCATaGGAGCAGCTTGCCATTCCC +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWRRPAP*EQLAIP
Trigger: GGGAATGGCAAGCTGCTCCCATGGCGCAGGCCTCCG...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTGCTGAGGCTTTGCCCTaGGGTTTTGGTCTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGAEALP*GFGLGL
Trigger: GAGACCAAGACCAAAACCTCAGGGCAAAGCCTCAGC...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGACCTAGGAGGCCAATaGGCATCTTCATGTCTAAGA +
Preference number: 2 (lower is better)
Translates to: ILQALWMPSIPARRPAPWDLGGQ*ASSCLR
Trigger: TCTTAGACATGAAGATGCCCATTGGCCTCCTAGGTC...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTGCCTGCCCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGACPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGGGCAGGC...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTTCAGCACCAAATGGCTaGGGATTTCCTGGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGSAPNG*GFPGAD
Trigger: ATCAGCCCCAGGAAATCCTCAGCCATTTGGTGCTGA...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGGCTCCTTTCCAAGGCTaGCCACCTGGTGAAGGTGGC +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWAPFQG*PPGEGG
Trigger: GCCACCTTCACCAGGTGGGCAGCCTTGGAAAGGAGC...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGTGCTGCCAGGCCTGCTaGTCAGGCCCCCTCCGGACA +
Preference number: 2 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWCCQAC*SGPLRT
Trigger: TGTCCGGAGGGGGCCTGAGCAGCAGGCCTGGCAGCA...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAACTCAGGGGCTGGGTGTaGAGACATCGGGACGGAGTG +
Preference number: 2 (lower is better)
Translates to: RVPVVQATQVAETGELFELRGWV*RHRDGV
Trigger: CACTCCGTCCCGATGTCTCCACACCCAGCCCCTGAG...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTTGGAGGTGTCTTCTTTaGCCATCCCACTCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGWRCLL*PSHSKP
Trigger: GGGCTTTGAGTGGGATGGCCAAAGAAGACACCTCCA...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGGCTGCAGTCAACTTCTaGCCTCGAGCTACTGCGAGG +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWAAVNF*PRATAR
Trigger: CCTCGCAGTAGCTCGAGGTCAGAAGTTGACTGCAGC...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAATTTATAGCTCTATGTaGCCACCGCCCCCGGCCCCC +
Preference number: 2 (lower is better)
Translates to: RVPVVQATQVAETGELFEIYSSM*PPPPAP
Trigger: GGGGGCCGGGGGCGGTGGGCACATAGAGCTATAAAT...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGGCCATGGGAGCAGCTTaGCATTCCCCTATGTCCCAG +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWAMGAA*HSPMSQ
Trigger: CTGGGACATAGGGGAATGGCAAGCTGCTCCCATGGC...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAACTGGCAGGTGGAGGTTaGAGTGAGCCAAGATCGCCC +
Preference number: 2 (lower is better)
Translates to: RVPVVQATQVAETGELFELAGGG*SEPRSP
Trigger: GGGCGATCTTGGCTCACTGCAACCTCCACCTGCCAG...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGCATATCCCCTGCAGCTaGTCCAGACCGGCCTGTACA +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWHIPCS*SRPACT
Trigger: TGTACAGGCCGGTCTGGAGCAGCTGCAGGGGATATG...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAATTTGTGACCCAGGGGTaGCTCCCAGTTGGATGGAGG +
Preference number: 2 (lower is better)
Translates to: GCTLANSLGLQSHHELEEFVTQG*LPVGWR
Trigger: CCTCCATCCAACTGGGAGCCACCCCTGGGTCACAAA...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGCTGAGCGAGGGGCTGTaGATCAAGCTGCAGTCAACT +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWLSEGL*IKLQST
Trigger: AGTTGACTGCAGCTTGATTCACAGCCCCTCGCTCAG...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCCCAGTCCCACCTCCCTaGTCTGAGCGAGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: MRNCEPESALAMTDEMQAPVPPP*SERGAV
Trigger: CACAGCCCCTCGCTCAGAGCAGGGAGGTGGGACTGG...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCGATGGGCTCAGGGGCTaGGTGTGGAGACATCGGGAC +
Preference number: 2 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSDGLRG*VWRHRD
Trigger: GTCCCGATGTCTCCACACCCAGCCCCTGAGCCCATC...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCTTGTTCAGGACCTGCTaGGATGGGCTCAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: MRNCEPESALAMTDEMQALFRTC*DGLRGW
Trigger: CCAGCCCCTGAGCCCATCTCAGCAGGTCCTGAACAA...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAAGTGGGAGAATTGCTTaGACCTGGCAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RVPVVQATQVAETGELFESGRIA*TWQVEV
Trigger: AACCTCCACCTGCCAGGTTCAAGCAATTCTCCCACT...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGGCAATGGAGTGTTTGTaGCCCAGGGGTGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRAMECL*PRGGSQ
Trigger: CTGGGAGCCACCCCTGGGTCACAAACACTCCATTGC...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAACACTCAAAGCCCCTGTaGCCTGGAAATCACTGGACA +
Preference number: 2 (lower is better)
Translates to: RVPVVQATQVAETGELFEHSKPL*PGNHWT
Trigger: TGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAGTG...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAAGGCTGTGAATCAAGCTaGAGTCAACTTCTGACCTCG +
Preference number: 2 (lower is better)
Translates to: GCTLANSLGLQSHHELEEGCESS*SQLLTS
Trigger: CGAGGTCAGAAGTTGACTGCAGCTTGATTCACAGCC...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCCCAGATCATATCCCCTaGAGCTGCTCCAGACCGGCC +
Preference number: 2 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSPDHIP*SCSRPA
Trigger: GGCCGGTCTGGAGCAGCTGCAGGGGATATGATCTGG...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTCTCTCTATCCCTAGCTaGCCACATTTTGTGTTTCAA +
Preference number: 2 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGLSIPS*PHFVFQ
Trigger: TTGAAACACAAAATGTGGCCAGCTAGGGATAGAGAG...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 90 bp GGGAGCTCACTACCCAGAAGCAGCCCATGCCATGACTCAGCAGTGTaGAAAGTCAGAATTCTCTCTATCCCTAGCTGGCCACATTTTGTG +
Preference number: 2 (lower is better)
Translates to: GSSLPRSSPCHDSAV*KVRILSIPSWPHFV
Trigger: CACAAAATGTGGCCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGGGCTGCTTCTGGGTAGTGAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCCTCCAATCAAACCCCTaGCCAGCCCAGGCGATCCTT +
Preference number: 2 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSLQSNP*PAQAIL
Trigger: AAGGATCGCCTGGGCTGGGCAGGGGTTTGATTGGAG...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGCTGAAATCGCACCATTaGACTCCAGCCTGGATGATA +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWLKSHH*TPAWMI
Trigger: TATCATCCAGGCTGGAGTGCAATGGTGCGATTTCAG...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCCAGGCAACCCTAAGATaGAAGGGGGTGAGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: MRNCEPESALAMTDEMQAQATLR*KGVRQD
Trigger: GTCCTGCCTCACCCCCTTCCATCTTAGGGTTGCCTG...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGGTAATCCCGGGACTTTaGGAGGCTGAGGCTGACGAA +
Preference number: 2 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWVIPGL*EAEADE
Trigger: TTCGTCAGCCTCAGCCTCCCAAAGTCCCGGGATTAC...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAGCCTTAATTGAAATATaGAACAGGGAGGCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: RVPVVQATQVAETGELFEALIEI*NREAPK
Trigger: CTTGGGGGCCTCCCTGTTGCATATTTCAATTAAGGC...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCATCCTTCAGGCTCTGTaGATGCCCAGCATCCCAGCA +
Preference number: 2 (lower is better)
Translates to: MRNCEPESALAMTDEMQAILQAL*MPSIPA
Trigger: TGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAACTGAGGTTTTGGTCTTaGTCTCAGAATCAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: RVPVVQATQVAETGELFELRFWS*SQNQAE
Trigger: CTCAGCCTGATTCTGAGACCAAGACCAAAACCTCAG...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGTTTGCCCTGAGGTTTTaGTCTTGGTCTCAGAATCAG +
Preference number: 2 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWFALRF*SWSQNQ
Trigger: CTGATTCTGAGACCAAGACCAAAACCTCAGGGCAAA...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGGCAAAGGGCTGTACCTaGAAGGTCTGGAGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRAKGCT*KVWRKD
Trigger: GTCCTTCCTCCAGACCTTCCAGGTACAGCCCTTTGC...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGCCAAGGATATTCAGCTaGTGTCCCTGTGCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRPRIFS*CPCAGH
Trigger: ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGG...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCAAAGCCCCTGTGCCCTaGAAATCACTGGACATCTGG +
Preference number: 2 (lower is better)
Translates to: MRNCEPESALAMTDEMQAKAPVP*KSLDIW
Trigger: CCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTT...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCCGAGTAAGTCTGCCTTaGAGTAGAAGGATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSRVSLP*SRRMVG
Trigger: ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCG...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCGAGCCAGGCACAGCCTaGAAATCACTAATTCTTGGG +
Preference number: 2 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSEPGTA*KSLILG
Trigger: CCCAAGAATTAGTGATTTCCAGGCTGTGCCTGGCTC...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 90 bp GAAATCACTAATTCTTGGGGGCAGAGTAGCACAGGCTTTGTGGCTTaGGGGCAGGTACTGAACTACTTTGAACCTCAGTCATCTCATTTG +
Preference number: 2 (lower is better)
Translates to: EITNSWGQSSTGFVA*GQVLNYFEPQSSHL
Trigger: CAAATGAGATGACTGAGGTTCAAAGTAGTTCAGTACCTGCCCCAAAGCCACAAAGCCTGTGCTACTCTGCCCCCAAGAATTAGTGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCATATACTCCCACCACTaGCCTATTTGGGGGCAAATG +
Preference number: 2 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSIYSHH*PIWGQM
Trigger: CATTTGCCCCCAAATAGGGCAGTGGTGGGAGTATAT...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTCTAGGACATGGCCCTaGCCATCAGCCAGACTCCAC +
Preference number: 2 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPSRTWP*PSARLH
Trigger: GTGGAGTCTGGCTGATGGCCAGGGCCATGTCCTAGA...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCCAGTTTCTTCCTCTGTaGAATGCGAACTATTCCATA +
Preference number: 2 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSQFLPL*NANYSI
Trigger: TATGGAATAGTTCGCATTTCACAGAGGAAGAAACTG...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR TCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCATCAGGTTATTGTGGTaGTTAAATGAGATGCTGCTA +
Preference number: 2 (lower is better)
Translates to: MRNCEPESALAMTDEMQAIRLLW*LNEMLL
Trigger: TAGCAGCATCTCATTTAATCACCACAATAACCTGAT...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp AACCCCTGCCCAGCCCAGGCGATCCTTCAGGCTCTGTaGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCA +
Preference number: 3 (lower is better)
Translates to: NPCPAQAILQAL*MPSIPARRPAP
Trigger: TGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGATCGCCTGGGCTGGGCAGGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp GCCTCCTGCAGGGGAGTCCCCTCTAGGACATGGCCCTaGCCATCAGCCAGACTCCACCACAGAGTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: ASCRGVPSRTWP*PSARLHHRVQG
Trigger: CCCCTGAACTCTGTGGTGGAGTCTGGCTGATGGCCAGGGCCATGTCCTAGAGGGGACTCCCCTGCAGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp GAGCCCGCCTCCTGCAGGGGAGTCCCCTCTAGGACATaGCCCTGGCCATCAGCCAGACTCCACCACAGAGTT +
Preference number: 3 (lower is better)
Translates to: EPASCRGVPSRT*PWPSARLHHRV
Trigger: AACTCTGTGGTGGAGTCTGGCTGATGGCCAGGGCCATGTCCTAGAGGGGACTCCCCTGCAGGAGGCGGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp CCTAAAGGGACACCACTCCCTTTAGAGCCCGCCTCCTaGAGGGGAGTCCCCTCTAGGACATGGCCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: PKGTPLPLEPAS*RGVPSRTWPWP
Trigger: TGGCCAGGGCCATGTCCTAGAGGGGACTCCCCTGCAGGAGGCGGGCTCTAAAGGGAGTGGTGTCCCTTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp TGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATaGGAGCAGCTTGCCATTCCCCTATGTCCCAGGCAA +
Preference number: 3 (lower is better)
Translates to: WMPSIPARRPAP*EQLAIPLCPRQ
Trigger: TTGCCTGGGACATAGGGGAATGGCAAGCTGCTCCCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp CTGGGTGTGGAGACATCGGGACGGAGTGGGGACCACTaGGCTCCTTTCCAAGGCTGCCCACCTGGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: LGVETSGRSGDH*APFQGCPPGEG
Trigger: ACCTTCACCAGGTGGGCAGCCTTGGAAAGGAGCCCAGTGGTCCCCACTCCGTCCCGATGTCTCCACACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp CATCCCAGCACGGAGGCCTGCGCCATGGGAGCAGCTTaGCATTCCCCTATGTCCCAGGCAACCCTAAGATGG +
Preference number: 3 (lower is better)
Translates to: HPSTEACAMGAA*HSPMSQATLRW
Trigger: CCATCTTAGGGTTGCCTGGGACATAGGGGAATGGCAAGCTGCTCCCATGGCGCAGGCCTCCGTGCTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp GGATTGGGGGTGGTCCAGACCCTCCAATCAAACCCCTaGCCAGCCCAGGCGATCCTTCAGGCTCTGTGGATG +
Preference number: 3 (lower is better)
Translates to: GLGVVQTLQSNP*PAQAILQALWM
Trigger: CATCCACAGAGCCTGAAGGATCGCCTGGGCTGGGCAGGGGTTTGATTGGAGGGTCTGGACCACCCCCAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CAA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCAGCTCTGTGAAAGCTTaGGGGCCTGTGGGGCCAGAT +
Preference number: 3 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCSSVKA*GPVGPD
Trigger: ATCTGGCCCCACAGGCCCCAAAGCTTTCACAGAGCT...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp AGCGATGTCTTTGCTGTGCTGCCAGTCCCACCTCCCTaGTCTGAGCGAGGGGCTGTGAATCAAGCTGCAGTC +
Preference number: 3 (lower is better)
Translates to: SDVFAVLPVPPP*SERGAVNQAAV
Trigger: GACTGCAGCTTGATTCACAGCCCCTCGCTCAGAGCAGGGAGGTGGGACTGGCAGCACAGCAAAGACATCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp GAGTCACATAGAGCCAGTGTGGGGTGCAGGATCCCATaGCTGTGTCAGAGACCCCTAGCTCTGGCCCTCAGT +
Preference number: 3 (lower is better)
Translates to: ESHRASVGCRIP*LCQRPLALALS
Trigger: ACTGAGGGCCAGAGCTAGGGGTCTCTGACACAGCCATGGGATCCTGCACCCCACACTGGCTCTATGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp ACATACTTTCAGATACCCCCTTCAGGAGCCCCGCAATaGGAACGGAGGAAGGGCAGTCCTGCCCACACCTCC +
Preference number: 3 (lower is better)
Translates to: TYFQIPPSGAPQ*ERRKGSPAHTS
Trigger: GGAGGTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGAAAGTATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp TGCCAGTCCCACCTCCCTGCTCTGAGCGAGGGGCTGTaGATCAAGCTGCAGTCAACTTCTGACCTCGAGCTA +
Preference number: 3 (lower is better)
Translates to: CQSHLPALSEGL*IKLQSTSDLEL
Trigger: TAGCTCGAGGTCAGAAGTTGACTGCAGCTTGATTCACAGCCCCTCGCTCAGAGCAGGGAGGTGGGACTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp TGGCCTGCGCCATCCCTGGATTTCCACACTGGTGGCTaGACCCTGGCTAACTCTTTAGGGCTCCAATCTCAC +
Preference number: 3 (lower is better)
Translates to: WPAPSLDFHTGG*TLANSLGLQSH
Trigger: GTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCCACCAGTGTGGAAATCCAGGGATGGCGCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp CACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTaGCTGAGGCTTTGCCCTGAGGTTTTGGTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: HRSQVCLGPRQD*LRLCPEVLVLV
Trigger: GACCAAGACCAAAACCTCAGGGCAAAGCCTCAGCCAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp ACTTCTGACCTCGAGCTACTGCGAGGGACCAAGCAATaGAGTGTTTGTGACCCAGGGGTGGCTCCCAGTTGG +
Preference number: 3 (lower is better)
Translates to: TSDLELLRGTKQ*SVCDPGVAPSW
Trigger: CCAACTGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCTCGAGGTCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp GCCTGTACAATCTCACTGTATGTCCACAGCCGGGGCTaGATAGCACCTCTTCAGGCAGGAGCAGTGGGTGCT +
Preference number: 3 (lower is better)
Translates to: ACTISLYVHSRG*IAPLQAGAVGA
Trigger: AGCACCCACTGCTCCTGCCTGAAGAGGTGCTATCCAGCCCCGGCTGTGGACATACAGTGAGATTGTACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CAA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGCGCCATGGGAGCAGCTaGCCATTCCCCTATGTCCCA +
Preference number: 3 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWRHGSS*PFPYVP
Trigger: TGGGACATAGGGGAATGGCAAGCTGCTCCCATGGCG...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp GAGCGAGGGGCTGTGAATCAAGCTGCAGTCAACTTCTaGCCTCGAGCTACTGCGAGGGACCAAGCAATGGAG +
Preference number: 3 (lower is better)
Translates to: ERGAVNQAAVNF*PRATARDQAME
Trigger: CTCCATTGCTTGGTCCCTCGCAGTAGCTCGAGGTCAGAAGTTGACTGCAGCTTGATTCACAGCCCCTCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp GCCACTACTACAGAGTCACATAGAGCCAGTGTGGGGTaGAGGATCCCATGGCTGTGTCAGAGACCCCTAGCT +
Preference number: 3 (lower is better)
Translates to: ATTTESHRASVG*RIPWLCQRPLA
Trigger: AGCTAGGGGTCTCTGACACAGCCATGGGATCCTGCACCCCACACTGGCTCTATGTGACTCTGTAGTAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp CTCAAAGCCCCTGTGCCCTGGAAATCACTGGACATCTaGGTTGAGGCCACACTGACCACAAGGCATGTCCAG +
Preference number: 3 (lower is better)
Translates to: LKAPVPWKSLDI*VEATLTTRHVQ
Trigger: CTGGACATGCCTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp AGGTGTCTTCTTTGGCCATCCCACTCAAAGCCCCTGTaGCCTGGAAATCACTGGACATCTGGGTTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: RCLLWPSHSKPL*PGNHWTSGLRP
Trigger: TGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAGTGGGATGGCCAAAGAAGACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp TCTTCTTTGGCCATCCCACTCAAAGCCCCTGTGCCCTaGAAATCACTGGACATCTGGGTTGAGGCCACACTG +
Preference number: 3 (lower is better)
Translates to: SSLAIPLKAPVP*KSLDIWVEATL
Trigger: CAGTGTGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAGTGGGATGGCCAAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CAA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCAAGTGGGAGAATTGCTaGAACCTGGCAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLKWENC*NLAGGG
Trigger: ACCTCCACCTGCCAGGTTCAAGCAATTCTCCCACTT...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CAA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAACAAGGAGCGATGTCTTaGCTGTGCTGCCAGTCCCAC +
Preference number: 3 (lower is better)
Translates to: RVPVVQATQVAETGELFEQGAMS*LCCQSH
Trigger: GTGGGACTGGCAGCACAGCAAAGACATCGCTCCTTG...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp TGCCCTGAGGTTTTGGTCTTGGTCTCAGAATCAGGCTaGGAATGGGAGCTGAAAGGATTGGGGGTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: CPEVLVLVSESG*EWELKGLGVVQ
Trigger: CTGGACCACCCCCAATCCTTTCAGCTCCCATTCTCAGCCTGATTCTGAGACCAAGACCAAAACCTCAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp CCTAGGTCTGCTCAGTCTTATCCAGATCATATCCCCTaGAGCTGCTCCAGACCGGCCTGTACAATCTCACTG +
Preference number: 3 (lower is better)
Translates to: PRSAQSYPDHIP*SCSRPACTISL
Trigger: CAGTGAGATTGTACAGGCCGGTCTGGAGCAGCTGCAGGGGATATGATCTGGATAAGACTGAGCAGACCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp CCTGGAAATCACTGGACATCTGGGTTGAGGCCACACTaGCCACAAGGCATGTCCAGTGCCTTCAGTTTGTCA +
Preference number: 3 (lower is better)
Translates to: PGNHWTSGLRPH*PQGMSSAFSLS
Trigger: TGACAAACTGAAGGCACTGGACATGCCTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAGTGATTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp GAATCAAGCTGCAGTCAACTTCTGACCTCGAGCTACTaGGAGGGACCAAGCAATGGAGTGTTTGTGACCCAG +
Preference number: 3 (lower is better)
Translates to: ESSCSQLLTSSY*EGPSNGVFVTQ
Trigger: CTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCTCGAGGTCAGAAGTTGACTGCAGCTTGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp CCAAGGACAGGGAGCTCACTACCCAGAAGCAGCCCATaGCATGACTCAGCAGTGTTGAAAGTCAGAATTCTC +
Preference number: 3 (lower is better)
Translates to: PRTGSSLPRSSP*HDSAVLKVRIL
Trigger: GAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGGGCTGCTTCTGGGTAGTGAGCTCCCTGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CAA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCCCTCAGTCATCTCATTaGAAAAATGGGGATAGGTGG +
Preference number: 3 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLPQSSH*KNGDRW
Trigger: CCACCTATCCCCATTTTTCAAATGAGATGACTGAGG...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CAA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCGAGAGGCAAACGGACTaGCCAAGGTCACACAGCTGC +
Preference number: 3 (lower is better)
Translates to: MRNCEPESALAMTDEMQAERQTD*PRSHSC
Trigger: GCAGCTGTGTGACCTTGGCAAGTCCGTTTGCCTCTC...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp TACCCAGAAGCAGCCCATGCCATGACTCAGCAGTGTTaGAAGTCAGAATTCTCTCTATCCCTAGCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: YPEAAHAMTQQC*KSEFSLSLAGH
Trigger: GTGGCCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGGGCTGCTTCTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp TCTGCTCAGTCTTATCCAGATCATATCCCCTGCAGCTaGTCCAGACCGGCCTGTACAATCTCACTGTATGTC +
Preference number: 3 (lower is better)
Translates to: SAQSYPDHIPCS*SRPACTISLYV
Trigger: GACATACAGTGAGATTGTACAGGCCGGTCTGGAGCAGCTGCAGGGGATATGATCTGGATAAGACTGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp GACAGGGAGCTCACTACCCAGAAGCAGCCCATGCCATaGCTCAGCAGTGTTGAAAGTCAGAATTCTCTCTAT +
Preference number: 3 (lower is better)
Translates to: DRELTTQKQPMP*LSSVESQNSLY
Trigger: ATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGGGCTGCTTCTGGGTAGTGAGCTCCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR-3UTR CAA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGACAGGCTTTGTGGCTTaGGGGCAGGTACTGAACTAC +
Preference number: 3 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRTGFVA*GQVLNY
Trigger: GTAGTTCAGTACCTGCCCCAAAGCCACAAAGCCTGT...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp AACAATGCCCAGTGCCTAGCACGTGCCCAGTGGACATaGGTTATTCATCATGCTATGACTTCTCTCCATCAC +
Preference number: 3 (lower is better)
Translates to: NNAQCLARAQWT*VIHHAMTSLHH
Trigger: GTGATGGAGAGAAGTCATAGCATGATGAATAACTCATGTCCACTGGGCACGTGCTAGGCACTGGGCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR GCA 72 bp GACATACACTTAGAACAATGCCCAGTGCCTAGCACGTaGCCAGTGGACATGAGTTATTCATCATGCTATGAC +
Preference number: 3 (lower is better)
Translates to: DIHLEQCPVPST*PVDMSYSSCYD
Trigger: GTCATAGCATGATGAATAACTCATGTCCACTGGGCACGTGCTAGGCACTGGGCATTGTTCTAAGTGTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp GTCAGTGGAATAGGACTTCCCGGAAGCAGAGAGATCTaGTGGAACATCCTGGGTAAAGAAACTCAAAAACTG +
Preference number: 3 (lower is better)
Translates to: VSGIGLPGSREI*WNILGKETQKL
Trigger: CAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATCAGATCTCTCTGCTTCCGGGAAGTCCTATTCCACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR TCA 72 bp ACATTCAGGTTAACAGTAACTAAGTTCTCCAAAGACTaGGGCATGTTCACATGTTTCCTCACCCCAACACTC +
Preference number: 3 (lower is better)
Translates to: TFRLTVTKFSKD*GMFTCFLTPTL
Trigger: GAGTGTTGGGGTGAGGAAACATGTGAACATGCCTCAGTCTTTGGAGAACTTAGTTACTGTTAACCTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CCA 72 bp ATGTTTGCAGTAGATGATGCTAAGTCACTGTGTTTGTaGTTGAATCCTGGTTCCATAGCCCATCCTGTGTTT +
Preference number: 3 (lower is better)
Translates to: MFAVDDAKSLCL*LNPGSIAHPVF
Trigger: AAACACAGGATGGGCTATGGAACCAGGATTCAACCACAAACACAGTGACTTAGCATCATCTACTGCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGCAGGTCCCAGCGCGTaGGCCAAAGTCGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWAGPSA*AKVGGL
Trigger: CAGCCCTCCGACTTTGGCTCACGCGCTGGGACCTGC...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACCGGAGGCCTGCGCCATaGGAGCAGCTTGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHRRPAP*EQLAIP
Trigger: GGGAATGGCAAGCTGCTCCCATGGCGCAGGCCTCCG...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCCAGCACGGAGGCCTaGGCCATGGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCPSTEA*AMGAAC
Trigger: GCAAGCTGCTCCCATGGCGCAGGCCTCCGTGCTGGG...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGTGCTGCCAGGCCTGCTaGTCAGGCCCCCTCCGGACA +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLCCQAC*SGPLRT
Trigger: TGTCCGGAGGGGGCCTGAGCAGCAGGCCTGGCAGCA...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGTCAGGGCCAGCCCCTaGCCGAGTCGACTCGGGACC +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPVRASP*PSRLGT
Trigger: GGTCCCGAGTCGACTCGGCCAGGGGCTGGCCCTGAC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCGTCCGCTGGGGCAGCTaGCTCTTCACCGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCVRWGS*LFTVGP
Trigger: TGGCCCCACGGTGAAGAGCCAGCTGCCCCAGCGGAC...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGAGGGTCCGGCAGATTTaGGGCTCCGAGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWRVRQI*GSEATG
Trigger: ACCTGTGGCCTCGGAGCCCCAAATCTGCCGGACCCT...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACCTCAGGGGCTGGGTGTaGAGACATCGGGACGGAGTG +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHLRGWV*RHRDGV
Trigger: CACTCCGTCCCGATGTCTCCACACCCAGCCCCTGAG...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCCCGAAGACCCGCCTaGCTCTCAGACGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCPRRPA*LSDDPA
Trigger: GGCTGGGTCGTCTGAGAGCCAGGCGGGTCTTCGGGG...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACGCAATGGAGTGTTTGTaGCCCAGGGGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHAMECL*PRGGSQ
Trigger: CTGGGAGCCACCCCTGGGTCACAAACACTCCATTGC...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCGACCCAGAACGTCCGTaGCCCGGCACCCGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLDPERP*PGTRGV
Trigger: GACGCCGCGGGTGCCGGGGCACGGACGTTCTGGGTC...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTGTCCCTGGGGTCCGCTaGGGCAGCTGGCTCTTCACC +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGVPGVR*GSWLFT
Trigger: GGTGAAGAGCCAGCTGCCCCAGCGGACCCCAGGGAC...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGAGCCTGAGTGGCGGCTaGTCAGTGGAGAGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLSLSGG*SVESAV
Trigger: CACGGCGCTCTCCACTGACCAGCCGCCACTCAGGCT...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGAGATGCCCTTGGGATaGGGGAAGGCAGCAGGGATC +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWEMPLG*GKAAGI
Trigger: GATCCCTGCTGCCTTCCCCCATCCCAAGGGCATCTC...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGCTCGGGGTCGGGAATaGGCGAGGGTCCGGCAGATT +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPARGRE*ARVRQI
Trigger: AATCTGCCGGACCCTCGCTCATTCCCGACCCCGAGC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTCAGTGGAGAGCGCCGTaGCTTGTAGGGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGQWRAP*LVGGWG
Trigger: TCCCCAGCCCCCTACAAGTCACGGCGCTCTCCACTG...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGCTGCAGTCAACTTCTaGCCTCGAGCTACTGCGAGG +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWAAVNF*PRATAR
Trigger: CCTCGCAGTAGCTCGAGGTCAGAAGTTGACTGCAGC...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGGAGCAGGGGGCGACTaGTGGACATTAGCCACTACT +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWGAGGD*WTLATT
Trigger: AGTAGTGGCTAATGTCCATCAGTCGCCCCCTGCTCC...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAACGCTGGGGTCTGCCCTaGCCTACCCCGCCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEERWGLP*PTPPGV
Trigger: CACTCCGGGCGGGGTAGGGCAGGGCAGACCCCAGCG...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACAGAGCCAGTGTGGGGTaGAGGATCCCATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHRASVG*RIPWLC
Trigger: ACACAGCCATGGGATCCTGCACCCCACACTGGCTCT...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGTTGTGGGGGCCTGCATaGGCCTCTGTATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLLWGPA*ASVWAG
Trigger: GCCTGCCCATACAGAGGCCCATGCAGGCCCCCACAA...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGGGAGGGAGCTGGATTaGAAGAGGGCAGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPGRELD*KRAAPE
Trigger: CTCGGGGGCTGCCCTCTTCCAATCCAGCTCCCTCCC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACTCATCGTTTACCACGTaGCCGCAGGCCTGCCCATAC +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHSSFTT*PQACPY
Trigger: GTATGGGCAGGCCTGCGGCCACGTGGTAAACGATGA...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCTGCTGGGGTCGTCACTaGGCTGCCCGAGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLCWGRH*AARGPG
Trigger: CCCCGGACCTCGGGCAGCCCAGTGACGACCCCAGCA...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACCAGGCAACCCTAAGATaGAAGGGGGTGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHQATLR*KGVRQD
Trigger: GTCCTGCCTCACCCCCTTCCATCTTAGGGTTGCCTG...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCGATGGGCTCAGGGGCTaGGTGTGGAGACATCGGGAC +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCDGLRG*VWRHRD
Trigger: GTCCCGATGTCTCCACACCCAGCCCCTGAGCCCATC...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCGGGAAGAGCTGGCCATaGCCTGCGCCATCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCGKSWP*PAPSLD
Trigger: ATCCAGGGATGGCGCAGGCCATGGCCAGCTCTTCCC...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 72 bp GCATCCCAGCACGGAGGCCTGCGCCATGGGAGCAGCTaGCCATTCCCCTATGTCCCAGGCAACCCTAAGATG +
Preference number: 4 (lower is better)
Translates to: ASQHGGLRHGSS*PFPYVPGNPKM
Trigger: CATCTTAGGGTTGCCTGGGACATAGGGGAATGGCAAGCTGCTCCCATGGCGCAGGCCTCCGTGCTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCAGGTCCTCCGAGCCGTaGCCGGAGACATCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLRSSEP*PETSGR
Trigger: CCGCCCAGATGTCTCCGGTCACGGCTCGGAGGACCT...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGCGTGCCACCATTCATaGGGCGGTAGTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPACHHS*GGSQGQ
Trigger: CTGGCCCTGACTACCGCCTCATGAATGGTGGCACGC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACGCTGAGGCTTTGCCCTaGGGTTTTGGTCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHAEALP*GFGLGL
Trigger: GAGACCAAGACCAAAACCTCAGGGCAAAGCCTCAGC...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCGGGTCCGTGTTCCGCTaGGGTCTGCCCTGCCCTACC +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLGSVFR*GLPCPT
Trigger: GGTAGGGCAGGGCAGACCCCAGCGGAACACGGACCC...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCTCCTCTGCCTCTGGGTaGAGAGTGGGACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCSSASG*RVGHPE
Trigger: CTCTGGGTGTCCCACTCTCCACCCAGAGGCAGAGGA...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGATCCTTCAGGCTCTGTaGATGCCCAGCATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWILQAL*MPSIPA
Trigger: TGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCCCAGAGGAGCCCCTaGCACTCATCCTGTGAACCA +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCPQRSP*HSSCEP
Trigger: TGGTTCACAGGATGAGTGCCAGGGGCTCCTCTGGGG...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCGGCCAAGGTAGAGCCTaGGTGGCGGCTGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLGQGRA*VAAGQW
Trigger: CCACTGACCAGCCGCCACTCAGGCTCTACCTTGGCC...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACAGTGGGAGAATTGCTTaGACCTGGCAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHSGRIA*TWQVEV
Trigger: AACCTCCACCTGCCAGGTTCAAGCAATTCTCCCACT...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCCCCGCTCACCACCACTaGTGGGGTCGTCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLPAHHH*WGRHWA
Trigger: AGCCCAGTGACGACCCCAGCAGTGGTGGTGAGCGGG...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGGCTGGGGAGGGCTTGTaGGGGCCTGCATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWAGEGL*GPAWAS
Trigger: AGAGGCCCATGCAGGCCCCCACAAGCCCTCCCCAGC...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCAAGGTAGAGCCTGAGTaGCGGCTGGTCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCKVEPE*RLVSGE
Trigger: CTCTCCACTGACCAGCCGCCACTCAGGCTCTACCTT...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGTCTTGAAGTGCCTGTaGGTGTGCAGAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWVLKCL*VCRADL
Trigger: GAGATCAGCTCTGCACACCCACAGGCACTTCAAGAC...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTGACATCGGGACGGAGTaGGGACCACTGGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGDIGTE*GPLGSF
Trigger: AAAGGAGCCCAGTGGTCCCCACTCCGTCCCGATGTC...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACTGCCCTGGAAATCACTaGACATCTGGGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHCPGNH*TSGLRP
Trigger: TGGCCTCAACCCAGATGTCCAGTGATTTCCAGGGCA...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGTTTGTGACCCAGGGGTaGCTCCCAGTTGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLFVTQG*LPVGWR
Trigger: CCTCCATCCAACTGGGAGCCACCCCTGGGTCACAAA...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGTCCACAGCCGGGGCTaGATAGCACCTCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPVHSRG*IAPLQA
Trigger: TGCCTGAAGAGGTGCTATCCAGCCCCGGCTGTGGAC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGAGGGGCTCAGACCCTTaGTTCTCAGACGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLRGSDP*FSDVSW
Trigger: CCAGCTCACGTCTGAGAACCAAGGGTCTGAGCCCCT...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGATGCAACTGACACCTaGAGAGGGATGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPDATDT*RGMVAR
Trigger: CCTGGCCACCATCCCTCTGCAGGTGTCAGTTGCATC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGCCCCATGGAAGTGGCTaGCTACTTCCTCGCACAGAT +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLPHGSG*LLPRTD
Trigger: ATCTGTGCGAGGAAGTAGGCAGCCACTTCCATGGGG...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCTGACCTCGAGCTACTaGGAGGGACCAAGCAATGGA +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCLTSSY*EGPSNG
Trigger: TCCATTGCTTGGTCCCTCGCAGTAGCTCGAGGTCAG...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGGGCTGTGAATCAAGCTaGAGTCAACTTCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: ILQALWMPSIPARRPAPWGCESS*SQLLTS
Trigger: CGAGGTCAGAAGTTGACTGCAGCTTGATTCACAGCC...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTCCAGTCCCACCTCCCTaGTCTGAGCGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGPVPPP*SERGAV
Trigger: CACAGCCCCTCGCTCAGAGCAGGGAGGTGGGACTGG...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCAGGTGCTGCTCACAGTaGCCGTGGTCCAGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLRCCSQ*PWSSRP
Trigger: CGGACGACTGGACCACGGCCACTGTGAGCAGCACCT...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCGCTGGCTCTTCACCGTaGGGCCAGCACCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLAGSSP*GQHQRP
Trigger: AGGCCTTTGGTGCTGGCCCCACGGTGAAGAGCCAGC...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCCTCTGGGGAGGGAGCTaGATTGGAAGAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLLWGGS*IGRGQP
Trigger: GGGCTGCCCTCTTCCAATCCAGCTCCCTCCCCAGAG...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTGCTCACCACCACTGCTaGGGTCGTCACTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGAHHHC*GRHWAA
Trigger: GGCAGCCCAGTGACGACCCCAGCAGTGGTGGTGAGC...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTCCCGACTGTGAACCCTaGCCTAAAGGGACACCACTC +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGPDCEP*PKGTPL
Trigger: GAGTGGTGTCCCTTTAGGCCAGGGTTCACAGTCGGG...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTGGGCCACGCCAGGACTaGCTGAGGCTTTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGGPRQD*LRLCPE
Trigger: CTCAGGGCAAAGCCTCAGCCAGTCCTGGCGTGGCCC...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGGTAATCCCGGGACTTTaGGAGGCTGAGGCTGACGAA +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLVIPGL*EAEADE
Trigger: TTCGTCAGCCTCAGCCTCCCAAAGTCCCGGGATTAC...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCGAACTCCCAGCTGTCTaGGAGGATATCGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCELPAV*EDIGCH
Trigger: ATGACAGCCGATATCCTCTCAGACAGCTGGGAGTTC...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTTGCTGCTGTTCCTCGTaGCCCTTCGAGTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGCCCSS*PFESVQ
Trigger: CTGAACAGACTCGAAGGGTCACGAGGAACAGCAGCA...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTGTGGGTGTGCAGAGCTaGTCTCTGCCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGVGVQS*SLPELE
Trigger: TTCAAGCTCAGGCAGAGATCAGCTCTGCACACCCAC...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCTGGCCATGCCCCAGATaGAGCCCTGGTACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLWPCPR*SPGTSR
Trigger: CCTAGAGGTACCAGGGCTTCATCTGGGGCATGGCCA...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTACTGGACATCTGGGTTaGGGCCACACTGACCACAAG +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGTGHLG*GHTDHK
Trigger: CTTGTGGTCAGTGTGGCCTCAACCCAGATGTCCAGT...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTTCCTCCTCCACCTCCTaGTCACCGTCCCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGSSSTS*SPSPSS
Trigger: TGAGGAGGGGGACGGTGAGCAGGAGGTGGAGGAGGA...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAGGCAGGAGCAGTGGGTaGTGCCAGGCCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RVPVVQATQVAETGELFEGRSSG*CQACCS
Trigger: TGAGCAGCAGGCCTGGCAGCACCCACTGCTCCTGCC...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGGAGACATCTGGGCGGTaGGAGGGGGCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRETSGR*EGAGPP
Trigger: CGGAGGCCCCGCCCCCTCCCACCGCCCAGATGTCTC...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTCCACTCGTGGCCCATTaGGGATGGGCGTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGPLVAH*GWACHH
Trigger: ATGGTGGCACGCCCATCCCCAATGGGCCACGAGTGG...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACTCCAAGCTACTCAGGTaGCTGAGACAGGAGAATTGT +
Preference number: 4 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHSKLLR*LRQENC
Trigger: ACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGA...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTACAAAACTTAGTAGCTaGGGTGGTGGCGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGTKLSS*GGGGCL
Trigger: CAGGCACCCGCCACCACCCCAGCTACTAAGTTTTGT...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGCAAAGGGCTGTACCTaGAAGGTCTGGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPAKGCT*KVWRKD
Trigger: GTCCTTCCTCCAGACCTTCCAGGTACAGCCCTTTGC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 72 bp GAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTaGGTTCTCAGACGTGAGCTGGGAAGAGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EDFLGLIEGLRP*VLRRELGRAGH
Trigger: ATGGCCAGCTCTTCCCAGCTCACGTCTGAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAATCAGGAGCCCCGCAATaGGAACGGAGGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEESGAPQ*ERRKGS
Trigger: ACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGA...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCTGTTCCGCTGGGGTCTaGCCTGCCCTACCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQACSAGV*PALPRP
Trigger: CGGGCGGGGTAGGGCAGGGCAGACCCCAGCGGAACA...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAAATTTATAGCTCTATGTaGCCACCGCCCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEEIYSSM*PPPPAP
Trigger: GGGGGCCGGGGGCGGTGGGCACATAGAGCTATAAAT...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTCACTCAAAGCCCCTGTaGCCTGGAAATCACTGGACA +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGHSKPL*PGNHWT
Trigger: TGTCCAGTGATTTCCAGGGCACAGGGGCTTTGAGTG...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCGCGGGCTTCTCTCTCTaGACCCTTCGGCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAAGFSL*TLRPRA
Trigger: GGCCCGGGGCCGAAGGGTCCAGAGAGAGAAGCCCGC...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGCCAAAGTCGGAGGGCTaGGAGGGCGCCGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRPKSEG*EGAGIP
Trigger: GGGGATCCCGGCGCCCTCCCAGCCCTCCGACTTTGG...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTAAAGCCCCTGTGCCCTaGAAATCACTGGACATCTGG +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGKAPVP*KSLDIW
Trigger: CCAGATGTCCAGTGATTTCCAGGGCACAGGGGCTTT...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCCACCACTGCCCTATTTaGGGGCAAATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLHHCPI*GQMARQ
Trigger: CTGCCTGGCCATTTGCCCCCAAATAGGGCAGTGGTG...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCAGATCAAGACCATCCTaGCCATGTGGTGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCRSRPS*PCGETP
Trigger: TGGGGTTTCACCACATGGCCAGGATGGTCTTGATCT...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCACAGTAGGTGGTCAGTaGAATAGGACTTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCTVGGQ*NRTSRK
Trigger: CTTCCGGGAAGTCCTATTCCACTGACCACCTACTGT...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAACCTCAAGCTGCCCGATaGCCATCTTCATGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEEPQAAR*PSSCAV
Trigger: GACAGCGCATGAAGATGGTCATCGGGCAGCTTGAGG...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTCTGCGTGCTCTTGTCTaGCACTGTCTGGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGLRALV*HCLGAA
Trigger: AGCAGCACCCAGACAGTGTCAGACAAGAGCACGCAG...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGGCCACCCCCAGGCCCTaGGTCCTGCAGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRATPRP*VLQSPD
Trigger: GTCTGGAGACTGCAGGACTCAGGGCCTGGGGGTGGC...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTGGGTTGAGGCCACACTaGCCACAAGGCATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGGLRPH*PQGMSS
Trigger: ACTGGACATGCCTTGTGGTCAGTGTGGCCTCAACCC...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCAGAAGTTGCAGTGAGCTaGAATCGCACCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPEVAVS*NRTIAL
Trigger: GAGTGCAATGGTGCGATTTCAGCTCACTGCAACTTC...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTAAATTAACCCGGGCATaGTGGTGGGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGKLTRA*WWVPVI
Trigger: GATTACAGGCACCCACCATCATGCCCGGGTTAATTT...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGGGAAGCAGAGAGATCTaGTGGAACATCCTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLGSREI*WNILGK
Trigger: TTTACCCAGGATGTTCCATCAGATCTCTCTGCTTCC...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGCTCCAATCAAACCCCTaGCCAGCCCAGGCGATCCTT +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWLQSNP*PAQAIL
Trigger: AAGGATCGCCTGGGCTGGGCAGGGGTTTGATTGGAG...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTCACAGATCTCAGGTCTaGTTAGGGCCACGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGHRSQV*LGPRQD
Trigger: GTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTG...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTTTCCACACTGGTGGCTaGACCCTGGCTAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGFHTGG*TLANSL
Trigger: TAAAGAGTTAGCCAGGGTGCAGCCACCAGTGTGGAA...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAAGTCATGAAGTCCAGGTaGCCCAGGTCAAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEEVMKSR*PRSKGP
Trigger: TGGCCCCTTTGACCTGGGCCACCTGGACTTCATGAC...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCTGAGGTTTTGGTCTTaGTCTCAGAATCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCLRFWS*SQNQAE
Trigger: CTCAGCCTGATTCTGAGACCAAGACCAAAACCTCAG...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTGTCTCTGGATGCAACTaGCACCTGCAGAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGVSGCN*HLQRDG
Trigger: ACCATCCCTCTGCAGGTGTCAGTTGCATCCAGAGAC...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTGAGGTTGCAGTGAGCTaGGATCACGCCATTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGEVAVS*DHAIAL
Trigger: GAGAGCAATGGCGTGATCTCAGCTCACTGCAACCTC...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCGCATTCCCCGGGCTCTaGACCGTCCGGGATTCGCTC +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAAFPGL*TVRDSL
Trigger: GAGCGAATCCCGGACGGTGCAGAGCCCGGGGAATGC...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTAAGTGCCTGTGGGTGTaGAGAGCTGATCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGKCLWV*RADLCL
Trigger: CAGGCAGAGATCAGCTCTGCACACCCACAGGCACTT...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCCCAAGGATATTCAGCTaGTGTCCCTGTGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLPRIFS*CPCAGH
Trigger: ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGG...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCAGGAGCAGTGGGTGCTaGCAGGCCTGCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSRSSGC*QACCSG
Trigger: GCCTGAGCAGCAGGCCTGGCAGCACCCACTGCTCCT...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGCCTGCCCACACCTCCTaGGACCTAGGAGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWPAHTS*DLGGQW
Trigger: CCATTGGCCTCCTAGGTCCCAGGAGGTGTGGGCAGG...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGCCTCCGGACAGACGCTaGGGGGCTGTAAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWPPDRR*GAVNLP
Trigger: AGGCAGGTTTACAGCCCCCCAGCGTCTGTCCGGAGG...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGCCTTGGCCACCTCCTTaGGCTCGCGAAGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRPWPPP*AREGCP
Trigger: AGGGCATCCTTCGCGAGCTCAAGGAGGTGGCCAAGG...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGTTGTTCAGGACCTGCTaGGATGGGCTCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWLFRTC*DGLRGW
Trigger: CCAGCCCCTGAGCCCATCTCAGCAGGTCCTGAACAA...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTAAAGTGCTCTTGCCATaGCAGATGAAATGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGKVLLP*QMKCKP
Trigger: AGGCTTGCATTTCATCTGTCATGGCAAGAGCACTTT...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCTCGCTTGGCTCCGCTTaGCTCGGCGCTGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQASLGSA*LGAVRE
Trigger: TTCCCTGACAGCGCCGAGGCAAGCGGAGCCAAGCGA...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCTTAGAGCCCGCCTCCTaGAGGGGAGTCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSLEPAS*RGVPSR
Trigger: CCTAGAGGGGACTCCCCTGCAGGAGGCGGGCTCTAA...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGCTGGCAGGTGGAGGTTaGAGTGAGCCAAGATCGCCC +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWLAGGG*SEPRSP
Trigger: GGGCGATCTTGGCTCACTGCAACCTCCACCTGCCAG...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAACCAGTGCCTAGCACGTaGCCAGTGGACATGAGTTAT +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEEPVPST*PVDMSY
Trigger: ATAACTCATGTCCACTGGGCACGTGCTAGGCACTGG...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGTGCTCACAGTGGCCGTaGTCCAGTCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRCSQWP*SSRPAP
Trigger: TGGAGCCGGACGACTGGACCACGGCCACTGTGAGCA...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCGCATGGGCCTCTGTATaGGCAGGCTCAGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSAWASV*AGSGGK
Trigger: CTTGCCCCCTGAGCCTGCCCATACAGAGGCCCATGC...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCAGCCTCCTCTGCCTCTaGGTGGAGAGTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQASLLCL*VESGTP
Trigger: GGGTGTCCCACTCTCCACCCAGAGGCAGAGGAGGCT...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AGCTACTGCGAGGGACCAAGCAATGGAGTGTTTGTGACCCAGGGGTGGCTCCCATTTGCCCTGAGGTTTTaGTCTTGGTCTCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: SYCEGPSNGVFVTQGWLPFALRF*SWSQNQ
Trigger: CTGATTCTGAGACCAAGACCAAAACCTCAGGGCAAA...TGGGAGCCACCCCTGGGTCACAAACACTCCATTGCTTGGTCCCTCGCAGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCCGGAGTGGGGACCACTaGGCTCCTTTCCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSRSGDH*APFQGC
Trigger: GCAGCCTTGGAAAGGAGCCCAGTGGTCCCCACTCCG...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAGAAGGACCCAAGGGATaGCTGTGTCTACCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RVPVVQATQVAETGELFEEGPKG*LCLPQG
Trigger: TCCTTGGGGTAGACACAGCCATCCCTTGGGTCCTTC...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATGATGGTGGGTGCAAGTaGCGCAGGGCCTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHDGGCK*RRAWPD
Trigger: GTCTGGCCAGGCCCTGCGTCACTTGCACCCACCATC...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGGTCTCAGAATCAGGCTaGGAATGGGAGCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWVSESG*EWELKG
Trigger: TCCTTTCAGCTCCCATTCTCAGCCTGATTCTGAGAC...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCCACGCCAGGACTGGCTaGGGCTTTGCCCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAHARTG*GFALRF
Trigger: AAACCTCAGGGCAAAGCCTCAGCCAGTCCTGGCGTG...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGAGGTGGAGGTTGCAGTaGGCCAAGATCGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRRWRLQ*AKIAPL
Trigger: CAGTGGGGCGATCTTGGCTCACTGCAACCTCCACCT...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGTCTTGCCATGACAGATaGAATGCAAGCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWSCHDR*NASLRG
Trigger: CCCTCTGAGGCTTGCATTTCATCTGTCATGGCAAGA...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATGACCCTCACCTCCAGTaGCCAGGCCACCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHDPHLQ*PGHPLQ
Trigger: CTGGAGTGGGTGGCCTGGTCACTGGAGGTGAGGGTC...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGGCCATGGGAGCAGCTTaGCATTCCCCTATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWAMGAA*HSPMSQ
Trigger: CTGGGACATAGGGGAATGGCAAGCTGCTCCCATGGC...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGCCAGATCATATCCCCTaGAGCTGCTCCAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRPDHIP*SCSRPA
Trigger: GGCCGGTCTGGAGCAGCTGCAGGGGATATGATCTGG...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGCCTGCAGAGGGATGGTaGCCAGGGTCTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWPAEGW*PGSSRC
Trigger: ACATCTGGAAGACCCTGGCCACCATCCCTCTGCAGG...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAAAAAGGCAGAGGTCTCTaGATGCAACTGACACCTGCA +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEEKGRGL*MQLTPA
Trigger: TGCAGGTGTCAGTTGCATCCAGAGACCTCTGCCTTT...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGCTTGGGTCCCAGGAGTaGCCTCCAGGTCTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWLGSQE*PPGLEV
Trigger: CACTTCAAGACCTGGAGGCCACTCCTGGGACCCAAG...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAAAGCTTTGGGGCCTGTaGGGCCAGATCCTTAGCATT +
Preference number: 4 (lower is better)
Translates to: RVPVVQATQVAETGELFEKLWGL*GQILSI
Trigger: AATGCTAAGGATCTGGCCCCACAGGCCCCAAAGCTT...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGGGAGTAGAAGGATGGTaGGTGCAAGTGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWGVEGW*VQVTQG
Trigger: GCCCTGCGTCACTTGCACCCACCATCCTTCTACTCC...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAACGAGTAAGTCTGCCTTaGAGTAGAAGGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GCTLANSLGLQSHHELEERVSLP*SRRMVG
Trigger: ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCG...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCGGATATCGGCTGTCATaGAGTCCAGGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSGYRLS*SPGGPG
Trigger: ACCTGGGCCACCTGGACTTCATGACAGCCGATATCC...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGATCAGGTTATTGTGGTaGTTAAATGAGATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: AAYFLAQISGLLRATPGLIRLLW*LNEMLL
Trigger: TAGCAGCATCTCATTTAATCACCACAATAACCTGAT...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCCTGGCACTCATCCTGTaGACCAGAGCCCTATCGCTG +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSLALIL*TRALSL
Trigger: CAGCGATAGGGCTCTGGTTCACAGGATGAGTGCCAG...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGATCCTGGCCATGTGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWILAMW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCACATGGCCAGGAT...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGATATACTCCCACCACTaGCCTATTTGGGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWIYSHH*PIWGQM
Trigger: CATTTGCCCCCAAATAGGGCAGTGGTGGGAGTATAT...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATTGGGGTCTCCACTCGTaGCCCATTGGGGATGGGCGT +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHWGLHS*PIGDGR
Trigger: ACGCCCATCCCCAATGGGCCACGAGTGGAGACCCCA...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCCCTCTCCCGTGTCCCTaGGGTCCGCTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPPLPCP*GPLGQL
Trigger: CAGCTGCCCCAGCGGACCCCAGGGACACGGGAGAGG...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCTCTAGGACATGGCCCTaGCCATCAGCCAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSSRTWP*PSARLH
Trigger: GTGGAGTCTGGCTGATGGCCAGGGCCATGTCCTAGA...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCTTTGTGGTTGAATCCTaGTTCCATAGCCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLFVVES*FHSPSC
Trigger: ACAGGATGGGCTATGGAACCAGGATTCAACCACAAA...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCCCCAGAAGCAGCCCATaGCATGACTCAGCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSPRSSP*HDSAVL
Trigger: CAACACTGCTGAGTCATGGCATGGGCTGCTTCTGGG...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATTTCTCACTCTCAGGGTaGGGCGGAATGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHFSLSG*GGMQLA
Trigger: GGCCAGCTGCATTCCGCCCCACCCTGAGAGTGAGAA...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCCTCTCTATCCCTAGCTaGCCACATTTTGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLLSIPS*PHFVFQ
Trigger: TTGAAACACAAAATGTGGCCAGCTAGGGATAGAGAG...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 72 bp AATTCTTGGGGGCAGAGTAGCACAGGCTTTGTGGCTTaGGGGCAGGTACTGAACTACTTTGAACCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: NSWGQSSTGFVA*GQVLNYFEPQS
Trigger: TGACTGAGGTTCAAAGTAGTTCAGTACCTGCCCCAAAGCCACAAAGCCTGTGCTACTCTGCCCCCAAGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATAGAGCACTTTGTCACTaGACCGCACCCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHRALCH*TAPSPV
Trigger: CACGGGAGAGGGTGCGGTTCAGTGACAAAGTGCTCT...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCTCAGCACCAAATGGCTaGGGATTTCCTGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSSAPNG*GFPGAD
Trigger: ATCAGCCCCAGGAAATCCTCAGCCATTTGGTGCTGA...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGTTATTCATCATGCTATaGCTTCTCTCCATCACCAGG +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWLFIML*LLSITR
Trigger: CCTGGTGATGGAGAGAAGTCATAGCATGATGAATAA...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCGCAGAACCGTCTGCGTaGTCTTGTCTGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAAEPSA*SCLTLS
Trigger: AGACAGTGTCAGACAAGAGCACGCAGACGGTTCTGC...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCACTAAGGGTAAGAGATaGCCTTGGGATGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSTKGKR*PWDGGR
Trigger: CCTTCCCCCATCCCAAGGGCATCTCTTACCCTTAGT...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCAGAGGCAAACGGACTTaGCAAGGTCACACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSRGKRT*QGHTAA
Trigger: AGCAGCTGTGTGACCTTGGCAAGTCCGTTTGCCTCT...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CAAAAACTGGCAAAGGTTTGGAGGCAGGGAAGAGCAGCAAAGGGCTGTACCTGGCTTCAGTTTGTCAAGTaGTTTCACAGTCACCATCTC +
Preference number: 4 (lower is better)
Translates to: QKLAKVWRQGRAAKGCTWLQFVK*FHSHHL
Trigger: GAGATGGTGACTGTGAAAGCACTTGACAAACTGAAG...CCAGGTACAGCCCTTTGCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCCTTGGAGTAGAAGGATaGTGGGTGCAAGTGACGCAG +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQALGVEG*WVQVTQ
Trigger: CTGCGTCACTTGCACCCACCATCCTTCTACTCCAAG...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATCACATAGAGCCAGTGTaGGGTGCAGGATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHHIEPV*GAGSHG
Trigger: GCCATGGGATCCTGCACCCCACACTGGCTCTATGTG...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGTGTACCTGGAAGGTCTaGAGGAAGGACCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRCTWKV*RKDPRD
Trigger: ATCCCTTGGGTCCTTCCTCCAGACCTTCCAGGTACA...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATCTGAGCGAGGGGCTGTaGATCAAGCTGCAGTCAACT +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHLSEGL*IKLQST
Trigger: AGTTGACTGCAGCTTGATTCACAGCCCCTCGCTCAG...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAAAGTTCTCCAAAGACTaGGGCATGTTCACATGTTTC +
Preference number: 4 (lower is better)
Translates to: RVPVVQATQVAETGELFEKFSKD*GMFTCF
Trigger: GAAACATGTGAACATGCCTCAGTCTTTGGAGAACTT...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATCTCCAGGTCTTGAAGTaGCTGTGGGTGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHLQVLK*LWVCRA
Trigger: AGCTCTGCACACCCACAGGCACTTCAAGACCTGGAG...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATAAGGAGCGATGTCTTTaGTGTGCTGCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHKERCL*CAASPT
Trigger: GGTGGGACTGGCAGCACAGCAAAGACATCGCTCCTT...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGGCCTTAATTGAAATATaGAACAGGGAGGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWALIEI*NREAPK
Trigger: CTTGGGGGCCTCCCTGTTGCATATTTCAATTAAGGC...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCCTCACTGGAGGAGTCTaGGGTCTCCACTCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPLTGGV*GLHSWP
Trigger: GGGCCACGAGTGGAGACCCCAGACTCCTCCAGTGAG...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCAAATCACTGGACATCTaGGTTGAGGCCACACTGACC +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAKSLDI*VEATLT
Trigger: GGTCAGTGTGGCCTCAACCCAGATGTCCAGTGATTT...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCTTTGCGAGGCCAAGGTaGGCAGATCACAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAFARPR*ADHKVK
Trigger: CTTGACTTTGTGATCTGCCCACCTTGGCCTCGCAAA...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATAGGATGCCCTCAAGCTaGCCGATGACCATCTTCATG +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHRMPSS*PMTIFM
Trigger: CATGAAGATGGTCATCGGGCAGCTTGAGGGCATCCT...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCATACACTTAGAACAATaGCCAGTGCCTAGCACGTGC +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAIHLEQ*PVPSTC
Trigger: GCACGTGCTAGGCACTGGGCATTGTTCTAAGTGTAT...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATTTGTCTGACACTGTCTaGGTGCTGCTGTTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHLSDTV*VLLFLV
Trigger: CACGAGGAACAGCAGCACCCAGACAGTGTCAGACAA...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCGACCTAGGAGGCCAATaGGCATCTTCATGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQADLGGQ*ASSCLR
Trigger: TCTTAGACATGAAGATGCCCATTGGCCTCCTAGGTC...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCGAAATCACTAATTCTTaGGGGCAGAGTAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQAEITNS*GQSSTG
Trigger: GCCTGTGCTACTCTGCCCCCAAGAATTAGTGATTTC...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATTGGAGGTGTCTTCTTTaGCCATCCCACTCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHWRCLL*PSHSKP
Trigger: GGGCTTTGAGTGGGATGGCCAAAGAAGACACCTCCA...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATTGCAGAGCTGATCTCTaGCTGAGCTTGAACACAGAG +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHCRADL*LSLNTE
Trigger: CTCTGTGTTCAAGCTCAGGCAGAGATCAGCTCTGCA...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCCATATCCCCTGCAGCTaGTCCAGACCGGCCTGTACA +
Preference number: 4 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPHIPCS*SRPACT
Trigger: TGTACAGGCCGGTCTGGAGCAGCTGCAGGGGATATG...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTATGAGTTATTCATCATaGTATGACTTCTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGMSYSS*YDFSPS
Trigger: TGATGGAGAGAAGTCATAGCATGATGAATAACTCAT...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCTGTGCTGGCCATGAGCCAGGCACAGCCTaGAAATCACTAATTCTTGGG +
Preference number: 4 (lower is better)
Translates to: IIVIIIPRIFSCCPCAGHEPGTA*KSLILG
Trigger: CCCAAGAATTAGTGATTTCCAGGCTGTGCCTGGCTC...ATGGCCAGCACAGGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 72 bp TGGATGTTTGCAGTAGATGATGCTAAGTCACTGTGTTaGTGGTTGAATCCTGGTTCCATAGCCCATCCTGTG +
Preference number: 4 (lower is better)
Translates to: WMFAVDDAKSLC*WLNPGSIAHPV
Trigger: CACAGGATGGGCTATGGAACCAGGATTCAACCACAAACACAGTGACTTAGCATCATCTACTGCAAACATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGATGACTCAGCAGTGTTaGAAGTCAGAATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWMTQQC*KSEFSL
Trigger: TAGAGAGAATTCTGACTTTCAACACTGCTGAGTCAT...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCATGTCTTTGCTGTGCTaGCAGTCCCACCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPMSLLC*QSHLPA
Trigger: AGCAGGGAGGTGGGACTGGCAGCACAGCAAAGACAT...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
3UTR CAA 72 bp TTTGCAGTAGATGATGCTAAGTCACTGTGTTTGTGGTaGAATCCTGGTTCCATAGCCCATCCTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FAVDDAKSLCLW*NPGSIAHPVFP
Trigger: AGGAAACACAGGATGGGCTATGGAACCAGGATTCAACCACAAACACAGTGACTTAGCATCATCTACTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGCAGTTTCTTCCTCTGTaGAATGCGAACTATTCCATA +
Preference number: 4 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRQFLPL*NANYSI
Trigger: TATGGAATAGTTCGCATTTCACAGAGGAAGAAACTG...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCGTTAGCTTATCGATCTaGCTCACCACCTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPVSLSI*LTTSLS
Trigger: GCTGAGGGAGGTGGTGAGCCAGATCGATAAGCTAAC...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CCA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCCTCAGTTTCCTCATCTaGAAGCTACTTAGACATAAG +
Preference number: 4 (lower is better)
Translates to: MRNCEPESALAMTDEMQALSFLI*KLLRHK
Trigger: CTTATGTCTAAGTAGCTTCCAGATGAGGAAACTGAG...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR GCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCCTGAAATCGCACCATTaGACTCCAGCCTGGATGATA +
Preference number: 4 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPLKSHH*TPAWMI
Trigger: TATCATCCAGGCTGGAGTGCAATGGTGCGATTTCAG...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR TCA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCATCTCATACGTGCTGTaGGGAGTAAATGAGATAAGA +
Preference number: 4 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPISYVL*GVNEIR
Trigger: TCTTATCTCATTTACTCCTCACAGCACGTATGAGAT...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS GCA 90 bp GTCCAGTCCAGATCGGCCGGGTCCGTGTTCCGCTGGGGTCTGCCCTaGCCTACCCCGCCCGGAGTGAGCTGGCACCGCCGGGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: VQSRSAGSVFRWGLP*PTPPGVSWHRRAPG
Trigger: CCCGGGCGCCCGGCGGTGCCAGCTCACTCCGGGCGGGGTAGGGCAGGGCAGACCCCAGCGGAACACGGACCCGGCCGATCTGGACTGGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CCA 90 bp GGAGACGCCGGGCAGGTCCCAGCGCGTGAGCCAAAGTCGGAGGGCTaGGAGGGCGCCGGGATCCCCTCAGCCCACGCCCGGCATTCCCCG +
Preference number: 5 (lower is better)
Translates to: GDAGQVPAREPKSEG*EGAGIPSAHARHSP
Trigger: CGGGGAATGCCGGGCGTGGGCTGAGGGGATCCCGGCGCCCTCCCAGCCCTCCGACTTTGGCTCACGCGCTGGGACCTGCCCGGCGTCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS GCA 90 bp GGGCGCCGGGATCCCCTCAGCCCACGCCCGGCATTCCCCGGGCTCTaGACCGTCCGGGATTCGCTCTGTCCAGTCCAGATCGGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: GRRDPLSPRPAFPGL*TVRDSLCPVQIGRV
Trigger: GACCCGGCCGATCTGGACTGGACAGAGCGAATCCCGGACGGTGCAGAGCCCGGGGAATGCCGGGCGTGGGCTGAGGGGATCCCGGCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS TCA 90 bp GGGTCTCCACTCGTGGCCCATTGGGGATGGGCGTGCCACCATTCATaGGGCGGTAGTCAGGGCCAGCCCCTGGCCGAGTCGACTCGGGAC +
Preference number: 5 (lower is better)
Translates to: GSPLVAHWGWACHHS*GGSQGQPLAESTRD
Trigger: GTCCCGAGTCGACTCGGCCAGGGGCTGGCCCTGACTACCGCCTCATGAATGGTGGCACGCCCATCCCCAATGGGCCACGAGTGGAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558834.1
ENST00000559817.1
ENST00000569673.3
CDS CCA 90 bp CCATCTTCATGCGCTGTCGAATCCGCTCCCGCTCACCACCACTGCTaGGGTCGTCACTGGGCTGCCCGAGGTCCGGGGCGCCCCGAATGT +
Preference number: 5 (lower is better)
Translates to: PSSCAVESAPAHHHC*GRHWAARGPGRPEC
Trigger: ACATTCGGGGCGCCCCGGACCTCGGGCAGCCCAGTGACGACCCCAGCAGTGGTGGTGAGCGGGAGCGGATTCGACAGCGCATGAAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CCA 90 bp GATGGGCGTGCCACCATTCATGAGGCGGTAGTCAGGGCCAGCCCCTaGCCGAGTCGACTCGGGACCATCCACGGAGTCCGAGGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: DGRATIHEAVVRASP*PSRLGTIHGVRGGR
Trigger: TCTACCCCCTCGGACTCCGTGGATGGTCCCGAGTCGACTCGGCCAGGGGCTGGCCCTGACTACCGCCTCATGAATGGTGGCACGCCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000558834.1
ENST00000559817.1
ENST00000569673.3
CDS CCA 90 bp ACTTTGTCACTGAACCGCACCCTCTCCCGTGTCCCTGGGGTCCGCTaGGGCAGCTGGCTCTTCACCGTGGGGCCAGCACCAAAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TLSLNRTLSRVPGVR*GSWLFTVGPAPKAS
Trigger: GGAGGCCTTTGGTGCTGGCCCCACGGTGAAGAGCCAGCTGCCCCAGCGGACCCCAGGGACACGGGAGAGGGTGCGGTTCAGTGACAAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558834.1
ENST00000569673.3
CDS CCA 90 bp ATGGTAGAGCACTTTGTCACTGAACCGCACCCTCTCCCGTGTCCCTaGGGTCCGCTGGGGCAGCTGGCTCTTCACCGTGGGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: MVEHFVTEPHPLPCP*GPLGQLALHRGAST
Trigger: GGTGCTGGCCCCACGGTGAAGAGCCAGCTGCCCCAGCGGACCCCAGGGACACGGGAGAGGGTGCGGTTCAGTGACAAAGTGCTCTACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558834.1
ENST00000569673.3
CDS CCA 90 bp CTTCACCGTGGGGCCAGCACCAAAGGCCTCCTCACTGGAGGAGTCTaGGGTCTCCACTCGTGGCCCATTGGGGATGGGCGTGCCACCATT +
Preference number: 5 (lower is better)
Translates to: LHRGASTKGLLTGGV*GLHSWPIGDGRATI
Trigger: AATGGTGGCACGCCCATCCCCAATGGGCCACGAGTGGAGACCCCAGACTCCTCCAGTGAGGAGGCCTTTGGTGCTGGCCCCACGGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558834.1
ENST00000559817.1
ENST00000569673.3
CDS-3UTR CAA 90 bp TCCCTTCTGCCCCTCCACAGCACCACTCAGCACAAGCCTGTGCACACAGTAGGTCTCGCTTGGCTCCGCTaGCCTCGGCGCTGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SLLPLHSTTQHKPVHTVGLAWLR*PRRCQG
Trigger: TCCCTGACAGCGCCGAGGCAAGCGGAGCCAAGCGAG...ACCTACTGTGTGCACAGGCTTGTGCTGAGTGGTGCTGTGGAGGGGCAGAAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS TCA 90 bp CCTCCTCATCGTCACAGCACAGAGCATGGTAGAGCACTTTGTCACTaGACCGCACCCTCTCCCGTGTCCCTGGGGTCCGCTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PPHRHSTEHGRALCH*TAPSPVSLGSAGAA
Trigger: AGCTGCCCCAGCGGACCCCAGGGACACGGGAGAGGGTGCGGTTCAGTGACAAAGTGCTCTACCATGCTCTGTGCTGTGACGATGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558834.1
ENST00000569673.3
CDS-3UTR CAA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACGATCTCTGCCTGAGCTaGAACACAGAGGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHDLCLS*NTEAGG
Trigger: TCCCCCTGCCTCTGTGTTCAAGCTCAGGCAGAGATC...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGTGTAATCCCAGTGCTTaGCGAGGCCAAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ILQALWMPSIPARRPAPWCNPSA*RGQGGQ
Trigger: CTGCCCACCTTGGCCTCGCAAAGCACTGGGATTACA...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS TCA 90 bp GGAAGGAGCAGAACTCCCAGCTGTCTGAGAGGATATCGGCTGTCATaGAGTCCAGGTGGCCCAGGTCAAAGGGGCCACCCATGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: GRSRTPSCLRGYRLS*SPGGPGQRGHPCPP
Trigger: AGGCGGGCATGGGTGGCCCCTTTGACCTGGGCCACCTGGACTTCATGACAGCCGATATCCTCTCAGACAGCTGGGAGTTCTGCTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS GCA 90 bp AGCTCCTTGGCCACCTCCTTGAGCTCGCGAAGGATGCCCTCAAGCTaGCCGATGACCATCTTCATGCGCTGTCGAATCCGCTCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: SSLATSLSSRRMPSS*PMTIFMRCRIRSRS
Trigger: TGAGCGGGAGCGGATTCGACAGCGCATGAAGATGGTCATCGGGCAGCTTGAGGGCATCCTTCGCGAGCTCAAGGAGGTGGCCAAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS GCA 90 bp GGGGGAGGGACCTTGGGTCCCAGGAGTGGCCTCCAGGTCTTGAAGTaGCTGTGGGTGTGCAGAGCTGATCTCTGCCTGAGCTTGAACACA +
Preference number: 5 (lower is better)
Translates to: GGGTLGPRSGLQVLK*LWVCRADLCLSLNT
Trigger: TGTGTTCAAGCTCAGGCAGAGATCAGCTCTGCACACCCACAGGCACTTCAAGACCTGGAGGCCACTCCTGGGACCCAAGGTCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp TCAGATACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACCACTGCCCTATTaGGGGGCAAATGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SDTPFRSPAMRTEEGQSCPPLPY*GANGQA
Trigger: TGCCTGGCCATTTGCCCCCAAATAGGGCAGTGGTGG...GCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGTATCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp ACCCCCTTCAGGAGCCCCGCAATGAGAACGGAGGAAGGGCAGTCCTGCCCACACAAGTGGGAGAATTGCTaGAACCTGGCAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TPFRSPAMRTEEGQSCPHKWENC*NLAGGG
Trigger: ACCTCCACCTGCCAGGTTCAAGCAATTCTCCCACTT...GTGTGGGCAGGACTGCCCTTCCTCCGTTCTCATTGCGGGGCTCCTGAAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GCTGCCTACTTCCTCGCACAGATCTCAGGTCTGCTTAGGGCCACGCCAGGACTGCAAGGAGCGATGTCTTaGCTGTGCTGCCAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: AAYFLAQISGLLRATPGLQGAMS*LCCQSH
Trigger: GTGGGACTGGCAGCACAGCAAAGACATCGCTCCTTG...CAGTCCTGGCGTGGCCCTAAGCAGACCTGAGATCTGTGCGAGGAAGTAGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CCA 90 bp AACTCCCAGCTGTCTGAGAGGATATCGGCTGTCATGAAGTCCAGGTaGCCCAGGTCAAAGGGGCCACCCATGCCCGCCTTGTCACTGCTA +
Preference number: 5 (lower is better)
Translates to: NSQLSERISAVMKSR*PRSKGPPMPALSLL
Trigger: TAGCAGTGACAAGGCGGGCATGGGTGGCCCCTTTGACCTGGGCCACCTGGACTTCATGACAGCCGATATCCTCTCAGACAGCTGGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS CCA 90 bp AAAGGCAGAGGTCTCTGGATGCAACTGACACCTGCAGAGGGATGGTaGCCAGGGTCTTCCAGATGTGGAAGGGGCTCCGGATATGGGCAG +
Preference number: 5 (lower is better)
Translates to: KGRGLWMQLTPAEGW*PGSSRCGRGSGYGQ
Trigger: CTGCCCATATCCGGAGCCCCTTCCACATCTGGAAGACCCTGGCCACCATCCCTCTGCAGGTGTCAGTTGCATCCAGAGACCTCTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CCA 90 bp TGCAAAGGCAGAGGTCTCTGGATGCAACTGACACCTGCAGAGGGATaGTGGCCAGGGTCTTCCAGATGTGGAAGGGGCTCCGGATATGGG +
Preference number: 5 (lower is better)
Translates to: CKGRGLWMQLTPAEG*WPGSSRCGRGSGYG
Trigger: CCCATATCCGGAGCCCCTTCCACATCTGGAAGACCCTGGCCACCATCCCTCTGCAGGTGTCAGTTGCATCCAGAGACCTCTGCCTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTTCCACTCGTGGCCCATaGGGGATGGGCGTGCCACCA +
Preference number: 5 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGSTRGP*GMGVPP
Trigger: TGGTGGCACGCCCATCCCCAATGGGCCACGAGTGGA...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS TCA 90 bp CGAGGGGGTAGAGACGTCCAGGAAGGAGCAGAACTCCCAGCTGTCTaGGAGGATATCGGCTGTCATGAAGTCCAGGTGGCCCAGGTCAAA +
Preference number: 5 (lower is better)
Translates to: RGGRDVQEGAELPAV*EDIGCHEVQVAQVK
Trigger: TTTGACCTGGGCCACCTGGACTTCATGACAGCCGATATCCTCTCAGACAGCTGGGAGTTCTGCTCCTTCCTGGACGTCTCTACCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS TCA 90 bp CTGTCTAGTGGCTGTGTAGGGCAGAACCGTCTGCGTGCTCTTGTCTaGCACTGTCTGGGTGCTGCTGTTCCTCGTGACCCTTCGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LSSGCVGQNRLRALV*HCLGAAVPRDPSSL
Trigger: CAGACTCGAAGGGTCACGAGGAACAGCAGCACCCAGACAGTGTCAGACAAGAGCACGCAGACGGTTCTGCCCTACACAGCCACTAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558834.1
ENST00000569673.3
CDS-3UTR CAA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAACCACCCATGCCCGCCTaGTCACTGCTAGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RVPVVQATQVAETGELFEPPMPA*SLLEVL
Trigger: CAGCACCTCTAGCAGTGACAAGGCGGGCATGGGTGG...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTTGGGAGCTGAAAGGATaGGGGGTGGTCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGWELKG*GVVQTL
Trigger: GAGGGTCTGGACCACCCCCAATCCTTTCAGCTCCCA...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp TGTAGCAAAATTGTGAAGTCAGCCAAGTACTACCTATATCCCACTTCCCCCTCCGAGGGTCCGGCAGATTaGGGGCTCCGAGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: CSKIVKSAKYYLYPTSPSEGPAD*GLRGHR
Trigger: CCTGTGGCCTCGGAGCCCCAAATCTGCCGGACCCTC...GGAGGGGGAAGTGGGATATAGGTAGTACTTGGCTGACTTCACAATTTTGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GGCTGCACCCTGGCTAACTCTTTAGGGCTCCAATCTCACCATGAGCTTGAGGAAAGCTCTGTGAAAGCTTaGGGGCCTGTGGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GCTLANSLGLQSHHELEESSVKA*GPVGPD
Trigger: ATCTGGCCCCACAGGCCCCAAAGCTTTCACAGAGCT...TTCCTCAAGCTCATGGTGAGATTGGAGCCCTAAAGAGTTAGCCAGGGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp ATCCTTCAGGCTCTGTGGATGCCCAGCATCCCAGCACGGAGGCCTGCGCCATGGCATGACTCAGCAGTGTaGAAAGTCAGAATTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ILQALWMPSIPARRPAPWHDSAV*KVRILS
Trigger: AGAGAGAATTCTGACTTTCAACACTGCTGAGTCATG...CCATGGCGCAGGCCTCCGTGCTGGGATGCTGGGCATCCACAGAGCCTGAAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTGCTGAAGTGGGAGAATaGCTTGAACCTGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGAEVGE*LEPGRW
Trigger: CCACCTGCCAGGTTCAAGCAATTCTCCCACTTCAGC...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGTCCTTGGCCACCTCCTaGAGCTCGCGAAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRSLATS*SSRRMP
Trigger: GGGCATCCTTCGCGAGCTCAAGGAGGTGGCCAAGGA...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGCGCCATGGGAGCAGCTaGCCATTCCCCTATGTCCCA +
Preference number: 5 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWRHGSS*PFPYVP
Trigger: TGGGACATAGGGGAATGGCAAGCTGCTCCCATGGCG...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTACAGGCTTTGTGGCTTaGGGGCAGGTACTGAACTAC +
Preference number: 5 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGTGFVA*GQVLNY
Trigger: GTAGTTCAGTACCTGCCCCAAAGCCACAAAGCCTGT...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAAAGAGTAGCACAGGCTTaGTGGCTTTGGGGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RVPVVQATQVAETGELFERVAQA*WLWGRY
Trigger: GTACCTGCCCCAAAGCCACAAAGCCTGTGCTACTCT...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTATGGAGGTGTCTTCTTaGGCCATCCCACTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGMEVSS*AIPLKA
Trigger: GGCTTTGAGTGGGATGGCCAAAGAAGACACCTCCAT...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp CAAATGGCTGAGGATTTCCTGGGGCTGATAGAGGGGCTCAGACCCTTGGTTCTCGGAATAAGCTCTACATaGCAGAGCCTCCTAGGTCTG +
Preference number: 5 (lower is better)
Translates to: QMAEDFLGLIEGLRPLVLGISST*QSLLGL
Trigger: CAGACCTAGGAGGCTCTGCAATGTAGAGCTTATTCC...GAGAACCAAGGGTCTGAGCCCCTCTATCAGCCCCAGGAAATCCTCAGCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp ATGAGAAACTGTGAGCCTGAAAGTGCTCTTGCCATGACAGATGAAATGCAAGCCGAGGGGCTCAGACCCTaGGTTCTCAGACGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: MRNCEPESALAMTDEMQAEGLRP*VLRREL
Trigger: CAGCTCACGTCTGAGAACCAAGGGTCTGAGCCCCTC...GGCTTGCATTTCATCTGTCATGGCAAGAGCACTTTCAGGCTCACAGTTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGACCGTCTGCGTGCTCTaGTCTGACACTGTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRTVCVL*SDTVWV
Trigger: CACCCAGACAGTGTCAGACAAGAGCACGCAGACGGT...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GATGGAACATCCTGGGTAAAGAAACTCAAAAACTGGCAAAGGTTTGGAGGCAGGGAGAGGCAAACGGACTaGCCAAGGTCACACAGCTGC +
Preference number: 5 (lower is better)
Translates to: DGTSWVKKLKNWQRFGGRERQTD*PRSHSC
Trigger: GCAGCTGTGTGACCTTGGCAAGTCCGTTTGCCTCTC...CCTGCCTCCAAACCTTTGCCAGTTTTTGAGTTTCTTTACCCAGGATGTTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp CCATGCCATGACTCAGCAGTGTTGAAAGTCAGAATTCTCTCTATCCCTAGCTGGAAAACTGGCAAAGGTTaGGAGGCAGGGAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PCHDSAVLKVRILSIPSWKTGKG*EAGKSS
Trigger: GCTGCTCTTCCCTGCCTCCAAACCTTTGCCAGTTTT...CCAGCTAGGGATAGAGAGAATTCTGACTTTCAACACTGCTGAGTCATGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp GGCAGGACTGTGTATAGCCGAGTAAGTCTGCCTTGGAGTAGAAGGATGGTGGGTAATCTCACCATGAGCTaGAGGAATAAGCTCTACATT +
Preference number: 5 (lower is better)
Translates to: GRTVYSRVSLPWSRRMVGNLTMS*RNKLYI
Trigger: AATGTAGAGCTTATTCCTCAAGCTCATGGTGAGATT...ACCCACCATCCTTCTACTCCAAGGCAGACTTACTCGGCTATACACAGTCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp CGGGTGCCTGTAGTCCAAGCTACTCAGGTGGCTGAGACAGGAGAATTGTTTGAACTAGCTGGCCACATTTaGTGTTTCAAGTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: RVPVVQATQVAETGELFELAGHI*CFKSEE
Trigger: TTCTTCAGACTTGAAACACAAAATGTGGCCAGCTAG...TTCAAACAATTCTCCTGTCTCAGCCACCTGAGTAGCTTGGACTACAGGCACCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCGCTGAGATCACGCCATaGCTCTCCAGCCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPAEITP*LSSLGD
Trigger: ATCTCCCAGGCTGGAGAGCAATGGCGTGATCTCAGC...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCAGACAGGAGAATTGTTaGAACCTGGGAGGTGGAAGT +
Preference number: 5 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPRQENC*NLGGGS
Trigger: ACTTCCACCTCCCAGGTTCAAACAATTCTCCTGTCT...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS-3UTR CAA 90 bp AATGTGAGCAATATAATTGTCATTATTATCCCAAGGATATTCAGCTGCTGTCCCCCTCAGTCATCTCATTaGAAAAATGGGGATAGGTGG +
Preference number: 5 (lower is better)
Translates to: NVSNIIVIIIPRIFSCCPPQSSH*KNGDRW
Trigger: CCACCTATCCCCATTTTTCAAATGAGATGACTGAGG...GGGACAGCAGCTGAATATCCTTGGGATAATAATGACAATTATATTGCTCACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CCA 72 bp GGGCAGGTCCCAGCGCGTGAGCCAAAGTCGGAGGGCTaGGAGGGCGCCGGGATCCCCTCAGCCCACGCCCGG +
Preference number: 6 (lower is better)
Translates to: GQVPAREPKSEG*EGAGIPSAHAR
Trigger: CCGGGCGTGGGCTGAGGGGATCCCGGCGCCCTCCCAGCCCTCCGACTTTGGCTCACGCGCTGGGACCTGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS GCA 72 bp AGATCGGCCGGGTCCGTGTTCCGCTGGGGTCTGCCCTaGCCTACCCCGCCCGGAGTGAGCTGGCACCGCCGG +
Preference number: 6 (lower is better)
Translates to: RSAGSVFRWGLP*PTPPGVSWHRR
Trigger: CCGGCGGTGCCAGCTCACTCCGGGCGGGGTAGGGCAGGGCAGACCCCAGCGGAACACGGACCCGGCCGATCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CCA 72 bp CGGGCGCTGGCTCCCTTAAAGGCCGCCCGGCTCGCTTaGCTCCGCTTGCCTCGGCGCTGTCAGGGAAGGGGC +
Preference number: 6 (lower is better)
Translates to: RALAPLKAARLA*LRLPRRCQGRG
Trigger: GCCCCTTCCCTGACAGCGCCGAGGCAAGCGGAGCCAAGCGAGCCGGGCGGCCTTTAAGGGAGCCAGCGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CAA 72 bp GCGGGCGCTGGCTCCCTTAAAGGCCGCCCGGCTCGCTaGGCTCCGCTTGCCTCGGCGCTGTCAGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: AGAGSLKGRPAR*APLASALSGKG
Trigger: CCCCTTCCCTGACAGCGCCGAGGCAAGCGGAGCCAAGCGAGCCGGGCGGCCTTTAAGGGAGCCAGCGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CCA 72 bp TGCGCTGTCGAATCCGCTCCCGCTCACCACCACTGCTaGGGTCGTCACTGGGCGAGGGTGGGGGCACCGGCC +
Preference number: 6 (lower is better)
Translates to: CAVESAPAHHHC*GRHWARVGAPA
Trigger: GGCCGGTGCCCCCACCCTCGCCCAGTGACGACCCCAGCAGTGGTGGTGAGCGGGAGCGGATTCGACAGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559817.1
CDS CCA 72 bp TGCGCTGTCGAATCCGCTCCCGCTCACCACCACTGCTaGGGTCGTCACTGGGCTGCCCGAGGTCCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: CAVESAPAHHHC*GRHWAARGPGR
Trigger: GCGCCCCGGACCTCGGGCAGCCCAGTGACGACCCCAGCAGTGGTGGTGAGCGGGAGCGGATTCGACAGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS GCA 72 bp TCATGCGCTGTCGAATCCGCTCCCGCTCACCACCACTaGTGGGGTCGTCACTGGGCGAGGGTGGGGGCACCG +
Preference number: 6 (lower is better)
Translates to: SCAVESAPAHHH*WGRHWARVGAP
Trigger: CGGTGCCCCCACCCTCGCCCAGTGACGACCCCAGCAGTGGTGGTGAGCGGGAGCGGATTCGACAGCGCATGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559817.1
CDS GCA 72 bp TCATGCGCTGTCGAATCCGCTCCCGCTCACCACCACTaGTGGGGTCGTCACTGGGCTGCCCGAGGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: SCAVESAPAHHH*WGRHWAARGPG
Trigger: CCCCGGACCTCGGGCAGCCCAGTGACGACCCCAGCAGTGGTGGTGAGCGGGAGCGGATTCGACAGCGCATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS TCA 72 bp CTCGTGGCCCATTGGGGATGGGCGTGCCACCATTCATaGGGCGGTAGTCAGGGCCAGCCCCTGGCCGAGTCG +
Preference number: 6 (lower is better)
Translates to: LVAHWGWACHHS*GGSQGQPLAES
Trigger: CGACTCGGCCAGGGGCTGGCCCTGACTACCGCCTCATGAATGGTGGCACGCCCATCCCCAATGGGCCACGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558834.1
ENST00000559817.1
ENST00000569673.3
CDS CCA 72 bp GCCACCATTCATGAGGCGGTAGTCAGGGCCAGCCCCTaGCCGAGTCGACTCGGGACCATCCACGGAGTCCGA +
Preference number: 6 (lower is better)
Translates to: ATIHEAVVRASP*PSRLGTIHGVR
Trigger: TCGGACTCCGTGGATGGTCCCGAGTCGACTCGGCCAGGGGCTGGCCCTGACTACCGCCTCATGAATGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558834.1
ENST00000559817.1
ENST00000569673.3
CDS CAA 72 bp AGGTGGCCCAGGTCAAAGGGGCCACCCATGCCCGCCTaGTCACTGCTAGAGGTGCTGCTCACAGTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: RWPRSKGPPMPA*SLLEVLLTVAV
Trigger: CACGGCCACTGTGAGCAGCACCTCTAGCAGTGACAAGGCGGGCATGGGTGGCCCCTTTGACCTGGGCCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS TCA 72 bp ATCTTTCTCAAGCCTCTCCAGGCTCGGGGTCGGGAATaGGCGAGGGTCCGGCAGATTTGGGGCTCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: IFLKPLQARGRE*ARVRQIWGSEA
Trigger: GGCCTCGGAGCCCCAAATCTGCCGGACCCTCGCTCATTCCCGACCCCGAGCCTGGAGAGGCTTGAGAAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS CAA 90 bp ATGAAGTCCAGGTGGCCCAGGTCAAAGGGGCCACCCATGCCCGCCTaGTCACTGCTAGAGGTGCTGCTCACAGTGGCCGTGGTCCAGTCG +
Preference number: 6 (lower is better)
Translates to: MKSRWPRSKGPPMPA*SLLEVLLTVAVVQS
Trigger: CGACTGGACCACGGCCACTGTGAGCAGCACCTCTAGCAGTGACAAGGCGGGCATGGGTGGCCCCTTTGACCTGGGCCACCTGGACTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS TCA 72 bp CGTCACAGCACAGAGCATGGTAGAGCACTTTGTCACTaGACCGCACCCTCTCCCGTGTCCCTGGGGTCCGCT +
Preference number: 6 (lower is better)
Translates to: RHSTEHGRALCH*TAPSPVSLGSA
Trigger: AGCGGACCCCAGGGACACGGGAGAGGGTGCGGTTCAGTGACAAAGTGCTCTACCATGCTCTGTGCTGTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558834.1
ENST00000569673.3
CDS GCA 72 bp GCCACCTCCTTGAGCTCGCGAAGGATGCCCTCAAGCTaGCCGATGACCATCTTCATGCGCTGTCGAATCCGC +
Preference number: 6 (lower is better)
Translates to: ATSLSSRRMPSS*PMTIFMRCRIR
Trigger: GCGGATTCGACAGCGCATGAAGATGGTCATCGGGCAGCTTGAGGGCATCCTTCGCGAGCTCAAGGAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS CCA 72 bp GGTCTCTGGATGCAACTGACACCTGCAGAGGGATGGTaGCCAGGGTCTTCCAGATGTGGAAGGGGCTCCGGA +
Preference number: 6 (lower is better)
Translates to: GLWMQLTPAEGW*PGSSRCGRGSG
Trigger: TCCGGAGCCCCTTCCACATCTGGAAGACCCTGGCCACCATCCCTCTGCAGGTGTCAGTTGCATCCAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569673.3
CDS TCA 72 bp GGCTGTGTAGGGCAGAACCGTCTGCGTGCTCTTGTCTaGCACTGTCTGGGTGCTGCTGTTCCTCGTGACCCT +
Preference number: 6 (lower is better)
Translates to: GCVGQNRLRALV*HCLGAAVPRDP
Trigger: AGGGTCACGAGGAACAGCAGCACCCAGACAGTGTCAGACAAGAGCACGCAGACGGTTCTGCCCTACACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558834.1
ENST00000569673.3
CDS TCA 72 bp AGAACTCCCAGCTGTCTGAGAGGATATCGGCTGTCATaGAGTCCAGGTGGCCCAGGTCAAAGGGGCCACCCA +
Preference number: 6 (lower is better)
Translates to: RTPSCLRGYRLS*SPGGPGQRGHP
Trigger: TGGGTGGCCCCTTTGACCTGGGCCACCTGGACTTCATGACAGCCGATATCCTCTCAGACAGCTGGGAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS CCA 72 bp GGCAGAACCGTCTGCGTGCTCTTGTCTGACACTGTCTaGGTGCTGCTGTTCCTCGTGACCCTTCGAGTCTGT +
Preference number: 6 (lower is better)
Translates to: GRTVCVLLSDTV*VLLFLVTLRVC
Trigger: ACAGACTCGAAGGGTCACGAGGAACAGCAGCACCCAGACAGTGTCAGACAAGAGCACGCAGACGGTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558834.1
ENST00000569673.3
CDS TCA 72 bp AGAGACGTCCAGGAAGGAGCAGAACTCCCAGCTGTCTaGGAGGATATCGGCTGTCATGAAGTCCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: RDVQEGAELPAV*EDIGCHEVQVA
Trigger: GGCCACCTGGACTTCATGACAGCCGATATCCTCTCAGACAGCTGGGAGTTCTGCTCCTTCCTGGACGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559817.1
ENST00000569673.3
CDS GCA 72 bp TTGCAAAGGCAGAGGTCTCTGGATGCAACTGACACCTaGAGAGGGATGGTGGCCAGGGTCTTCCAGATGTGG +
Preference number: 6 (lower is better)
Translates to: LQRQRSLDATDT*RGMVARVFQMW
Trigger: CCACATCTGGAAGACCCTGGCCACCATCCCTCTGCAGGTGTCAGTTGCATCCAGAGACCTCTGCCTTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569673.3