RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INSR (Homo sapiens)

Ensembl gene IDs: ENSG00000171105

Ensembl transcript IDs: ENST00000302850.10, ENST00000341500.9, ENST00000593970.1, ENST00000597211.1, ENST00000598216.1, ENST00000600492.1, ENST00000601099.1

Found 906 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGATGAGGTCACCGGGCTCAGAGCAGCTTCCGGGAGTTCAGTACTaGGGACCGTCAGATGCTCTCAGGGTGGAGGGGACCAAGACGTAC +
Preference number: 1 (lower is better)
Translates to: QMRSPGSEQLPGVQY*GPSDALRVEGTKTY
Trigger: GTACGTCTTGGTCCCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGCTCTGAGCCCGGTGACCTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp GCTCACTTCAGGGGGATTCCATGGAACAGGTGGGAATGCTTGCTCTaGATCAAAGCCCGTCTTTGCCCCGGCAGCCATCTCTCACCAAAG +
Preference number: 1 (lower is better)
Translates to: AHFRGIPWNRWECLL*IKARLCPGSHLSPK
Trigger: CTTTGGTGAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCATGGAATCCCCCTGAAGTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp TCTGAGTTGTTTTCTGCAAAAGCTGCAGCACATTTGATCCTGCGTTaGCAACGCACAGGGCCGAGGCCACCCAGGCACACAAAGGGACGA +
Preference number: 1 (lower is better)
Translates to: SELFSAKAAAHLILR*QRTGPRPPRHTKGR
Trigger: TCGTCCCTTTGTGTGCCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTTGCAGAAAACAACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp TCCTCCAGACTCTACTCTCTTAGGGATTGCAACACTGTAAGCACCTaGGCATTCAGCTCAGGCACCACACCTGGCCCAGATGAGGTCACC +
Preference number: 1 (lower is better)
Translates to: SSRLYSLRDCNTVST*AFSSGTTPGPDEVT
Trigger: GGTGACCTCATCTGGGCCAGGTGTGGTGCCTGAGCTGAATGCTCAGGTGCTTACAGTGTTGCAATCCCTAAGAGAGTAGAGTCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp TTTGTGCTCACTTCAGGGGGATTCCATGGAACAGGTGGGAATGCTTaGTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCCATCTCTCAC +
Preference number: 1 (lower is better)
Translates to: FVLTSGGFHGTGGNA*SESKPVFAPAAISH
Trigger: GTGAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCATGGAATCCCCCTGAAGTGAGCACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 90 bp AGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTaGAGGGGACCAAGACGTACTCTCAGTGCACCTCTCTCTTACATT +
Preference number: 1 (lower is better)
Translates to: SFREFSTEDRQMLSG*RGPRRTLSAPLSYI
Trigger: AATGTAAGAGAGAGGTGCACTGAGAGTACGTCTTGGTCCCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp CGTCTTTGCCCCGGCAGCCATCTCTCACCAAAGGAAGGTACACCTTaGTGGGTTACCCCATATATCAGATACATCATGACAGCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: RLCPGSHLSPKEGTP*WVTPYIRYIMTAWN
Trigger: GTTCCAGGCTGTCATGATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCTGCCGGGGCAAAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp GCTACCAGCTTATCCGAACAGGAACCTTCCAGCAGACCTGGTACCTaGACCAGACCATCCATAAAACCTAGTCTCTCACACACTCCACGT +
Preference number: 1 (lower is better)
Translates to: ATSLSEQEPSSRPGT*TRPSIKPSLSHTPR
Trigger: ACGTGGAGTGTGTGAGAGACTAGGTTTTATGGATGGTCTGGTTCAGGTACCAGGTCTGCTGGAAGGTTCCTGTTCGGATAAGCTGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 90 bp ACCTTCTCCATCCCAACTCCCTCCCTCAAAATTCTTACTGGTCCCTaGCATTCGAATCAGCTGATACACACGTTCCCTGATTCAGACCGG +
Preference number: 1 (lower is better)
Translates to: TFSIPTPSLKILTGP*HSNQLIHTFPDSDR
Trigger: CCGGTCTGAATCAGGGAACGTGTGTATCAGCTGATTCGAATGCCAGGGACCAGTAAGAATTTTGAGGGAGGGAGTTGGGATGGAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 90 bp CTTTGCCCCGGCAGCCATCTCTCACCAAAGGAAGGTACACCTTGCTaGGTTACCCCATATATCAGATACATCATGACAGCCTGGAACTTA +
Preference number: 1 (lower is better)
Translates to: LCPGSHLSPKEGTPC*VTPYIRYIMTAWNL
Trigger: TAAGTTCCAGGCTGTCATGATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCTGCCGGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp AAGATCTGTCTGTCAGTTGGTAACATAGTCCCCAGGGTCACAGGATaGCCTATGCAGACCCTTGTGTCAGTTCCCACAGCTTCTCTCAAT +
Preference number: 1 (lower is better)
Translates to: KICLSVGNIVPRVTG*PMQTLVSVPTASLN
Trigger: ATTGAGAGAAGCTGTGGGAACTGACACAAGGGTCTGCATAGGTCATCCTGTGACCCTGGGGACTATGTTACCAACTGACAGACAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 90 bp CAAAGAGAAGAAACGGTGGATTCACGCCCATTCGGAAGTTCTTGGTaGTGTGTAAGGTCTTTTTCACGGTTTCTCCTCCAGACTCTACTC +
Preference number: 1 (lower is better)
Translates to: QREETVDSRPFGSSW*CVRSFSRFLLQTLL
Trigger: GAGTAGAGTCTGGAGGAGAAACCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCACCGTTTCTTCTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp CTTAGATGTTCCCAAAGTCCATCCAGGTTGTTGTGCTTTGGGATCTaGCGTTCTTGGGTTTGCACAATAACGGTTAGGATGTTCACACCC +
Preference number: 1 (lower is better)
Translates to: LRCSQSPSRLLCFGI*RSWVCTITVRMFTP
Trigger: GGGTGTGAACATCCTAACCGTTATTGTGCAAACCCAAGAACGTCAGATCCCAAAGCACAACAACCTGGATGGACTTTGGGAACATCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp CTCACATGGGTTATCAAAGCTGCACAAGGTCCAATAATATCAGCTTaGGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCA +
Preference number: 1 (lower is better)
Translates to: LTWVIKAAQGPIISA*GQSNPNTEVQGVVA
Trigger: TGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGATATTATTGGACCTTGTGCAGCTTTGATAACCCATGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp AATAAGCACATTTCTTGGTGGACTACCTGCCCTGCTAGGATACAGTaGAAGATCTGTCTGTCAGTTGGTAACATAGTCCCCAGGGTCACA +
Preference number: 1 (lower is better)
Translates to: NKHISWWTTCPARIQ*KICLSVGNIVPRVT
Trigger: TGTGACCCTGGGGACTATGTTACCAACTGACAGACAGATCTTTCACTGTATCCTAGCAGGGCAGGTAGTCCACCAAGAAATGTGCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp GCCCGCACCCAGATAGAAATTTGGCTGGTGGCTGGTTCTGGACCTTaGCTAGTATCAGAAGGTAAAAGTAAGCTCAAAAAGCCATTGTGT +
Preference number: 1 (lower is better)
Translates to: ARTQIEIWLVAGSGP*LVSEGKSKLKKPLC
Trigger: ACACAATGGCTTTTTGAGCTTACTTTTACCTTCTGATACTAGTCAAGGTCCAGAACCAGCCACCAGCCAAATTTCTATCTGGGTGCGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 90 bp TTGCAAAGAGAAGAAACGGTGGATTCACGCCCATTCGGAAGTTCTTaGTGGTGTGTAAGGTCTTTTTCACGGTTTCTCCTCCAGACTCTA +
Preference number: 1 (lower is better)
Translates to: LQREETVDSRPFGSS*WCVRSFSRFLLQTL
Trigger: TAGAGTCTGGAGGAGAAACCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCACCGTTTCTTCTCTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp TCTTACTGGTCCCTGGCATTCGAATCAGCTGATACACACGTTCCCTaGTTCAGACCGGTTCCAGGTAGAATTCTGAAATCTCAAAGATGT +
Preference number: 1 (lower is better)
Translates to: SYWSLAFESADTHVP*FRPVPGRILKSQRC
Trigger: ACATCTTTGAGATTTCAGAATTCTACCTGGAACCGGTCTGAATCAGGGAACGTGTGTATCAGCTGATTCGAATGCCAGGGACCAGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp ACACACGTGAGCACACGCCGGGACCACAGACCCTTATCCAAAATATaGAAGCAGCAGCTATTGGTCAATTTGAGGAACTCATTTTGTAAA +
Preference number: 1 (lower is better)
Translates to: THVSTRRDHRPLSKI*KQQLLVNLRNSFCK
Trigger: TTTACAAAATGAGTTCCTCAAATTGACCAATAGCTGCTGCTTTCATATTTTGGATAAGGGTCTGTGGTCCCGGCGTGTGCTCACGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp TTGGAGAATTTAAAAAGACATTGCATTAGGTGTTTGTGTGTAAGGTaGATCACCAGCCTGAAAGGAGTGGGCATAAACCATCAGGGAGCC +
Preference number: 1 (lower is better)
Translates to: LENLKRHCIRCLCVR*ITSLKGVGINHQGA
Trigger: GGCTCCCTGATGGTTTATGCCCACTCCTTTCAGGCTGGTGATGCACCTTACACACAAACACCTAATGCAATGTCTTTTTAAATTCTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp TTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTaGATTAGGTGTTTGTGTGTAAGGTGCATCACCAGCCTGAAAGGA +
Preference number: 1 (lower is better)
Translates to: FPHMLPSHLENLKRH*IRCLCVRCITSLKG
Trigger: TCCTTTCAGGCTGGTGATGCACCTTACACACAAACACCTAATGCAATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 90 bp TTGATGAACCAAAGTGATGAGTTCACTGTGTTCTTTGAGCAGCTGTaGTGGTTCTTTTTGCAAAGAGAAGAAACGGTGGATTCACGCCCA +
Preference number: 1 (lower is better)
Translates to: LMNQSDEFTVFFEQL*WFFLQREETVDSRP
Trigger: TGGGCGTGAATCCACCGTTTCTTCTCTTTGCAAAAAGAACCACCACAGCTGCTCAAAGAACACAGTGAACTCATCACTTTGGTTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp CAAAGTGTAAAGACTAAACAAGCTGTTCCTGAATATGTGCATGGGTaGACACTTATTTTGAGGCTCTTCCTTCCTTCTCCAATGGGACCA +
Preference number: 1 (lower is better)
Translates to: QSVKTKQAVPEYVHG*TLILRLFLPSPMGP
Trigger: TGGTCCCATTGGAGAAGGAAGGAAGAGCCTCAAAATAAGTGTGCACCCATGCACATATTCAGGAACAGCTTGTTTAGTCTTTACACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 90 bp ACTGCTTCCAATGATGAAACAGCACCTAGGACAGCTCCTAAAACCTaGACATTTTCTGATGCGTATTTGACATCACTGATGCAGAGAGAA +
Preference number: 1 (lower is better)
Translates to: TASNDETAPRTAPKT*TFSDAYLTSLMQRE
Trigger: TTCTCTCTGCATCAGTGATGTCAAATACGCATCAGAAAATGTTCAGGTTTTAGGAGCTGTCCTAGGTGCTGTTTCATCATTGGAAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp GTTTTATTGTTACAAAGTCAACATTTCCTAATGTCAAAGGAGGTTTaGAACCCAATAGCTGTTTGCTCTTTTCACTGTGGCAGTAGAGTC +
Preference number: 1 (lower is better)
Translates to: VLLLQSQHFLMSKEV*NPIAVCSFHCGSRV
Trigger: GACTCTACTGCCACAGTGAAAAGAGCAAACAGCTATTGGGTTGCAAACCTCCTTTGACATTAGGAAATGTTGACTTTGTAACAATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 90 bp GCTTCTTGTACCCAATCACTGAGGCTCCTCAGCAATATTTTTACATaGTGTATTTTCCCGAATCATATAAATAAGATAGCAATAGACAAT +
Preference number: 1 (lower is better)
Translates to: ASCTQSLRLLSNIFT*CIFPNHINKIAIDN
Trigger: ATTGTCTATTGCTATCTTATTTATATGATTCGGGAAAATACAGCATGTAAAAATATTGCTGAGGAGCCTCAGTGATTGGGTACAAGAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGAAGGAGAGAGGGGGATaGGCTCGCACCCTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRKERGG*ARTLEK
Trigger: CTTCTCAAGGGTGCGAGCTCATCCCCCTCTCTCCTT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCAAAGAGGCCACTTGTaGCTGACTCCCTCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRQRGHL*LTPSPS
Trigger: GGAAGGGGAGGGAGTCAGGCACAAGTGGCCTCTTTG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGCAGGTGGAGAAAGGTaGGTCTGCAAGGGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATAGGER*VCKGSA
Trigger: GGCACTGCCCTTGCAGACTCACCTTTCTCCACCTGC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCTGAGGACCGTCAGATaGTCTCAGGGTGGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATLRTVR*SQGGGD
Trigger: GTCCCCTCCACCCTGAGAGCATCTGACGGTCCTCAG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGACCTTCCAGCAGACCTaGTACCTGAACCAGACCATC +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRTFQQT*YLNQTI
Trigger: GATGGTCTGGTTCAGGTACCAGGTCTGCTGGAAGGT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTCCGCATGGATACTTTaGACACACATCAGCCGTGTC +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSAWIL*THISRV
Trigger: GACACGGCTGATGTGTGTGCAAAGTATCCATGCGGA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCCCAGGGCACCTTTGTaGTCACTTCAGGGGGATTCC +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATPRAPL*SLQGDS
Trigger: GGAATCCCCCTGAAGTGAGCACAAAGGTGCCCTGGG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGAAGCACATTTCTTGGTaGACTACCTGCCCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRKHISW*TTCPAR
Trigger: CCTAGCAGGGCAGGTAGTCCACCAAGAAATGTGCTT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGAGCAGACCTGGTACCTaGACCAGACCATCCATAAAA +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSRPGT*TRPSIK
Trigger: TTTTATGGATGGTCTGGTTCAGGTACCAGGTCTGCT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAGAGGAAAGCGAAAATaGGAACCCCTGCCCGCCCCC +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQRGKRK*EPLPAP
Trigger: GGGGGCGGGCAGGGGTTCCCATTTTCGCTTTCCTCT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGATGCTCTCAGGGTaGAGGGGACCAAGACGTACT +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATQMLSG*RGPRRT
Trigger: AGTACGTCTTGGTCCCCTCCACCCTGAGAGCATCTG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCCGGGAGTTCAGTACTaGGGACCGTCAGATGCTCTC +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQPGVQY*GPSDAL
Trigger: GAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGATACACACGTTCCCTaGTTCAGACCGGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATDTHVP*FRPVPG
Trigger: ACCTGGAACCGGTCTGAATCAGGGAACGTGTGTATC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTCAACCTGTAAAACTTaGAATTCTCCTGGAACAGGG +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSTCKT*NSPGTG
Trigger: CCCTGTTCCAGGAGAATTTCAAGTTTTACAGGTTGA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCCTTGGCCACCAATGTaGAGGGAGGGTAGAAACCTG +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQPWPPM*REGRNL
Trigger: CAGGTTTCTACCCTCCCTTCACATTGGTGGCCAAGG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTTGTGCTTTGGGATCTaGCGTTCTTGGGTTTGCACA +
Preference number: 2 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGLCFGI*RSWVCT
Trigger: TGTGCAAACCCAAGAACGTCAGATCCCAAAGCACAA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCACACCTGGCCCAGATaGGGTCACCGGGCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYHTWPR*GHRAQS
Trigger: GCTCTGAGCCCGGTGACCTCATCTGGGCCAGGTGTG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTGGAGGTTGCCATTATaGCTCTATCCCATTCTTAAG +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRWRLPL*LYPILK
Trigger: CTTAAGAATGGGATAGAGTCATAATGGCAACCTCCA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCATCCATTTACCGGATaGCCAGCGCAAGTCATATGC +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATHPFTG*PAQVIC
Trigger: GCATATGACTTGCGCTGGTCATCCGGTAAATGGATG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGAATATGTGCATGGGTaGACACTTATTTTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPREYVHG*TLILRL
Trigger: GAGCCTCAAAATAAGTGTGCACCCATGCACATATTC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGATTCTTACTGGTCCCTaGCATTCGAATCAGCTGATA +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRILTGP*HSNQLI
Trigger: TATCAGCTGATTCGAATGCCAGGGACCAGTAAGAAT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAAGCACATTTCTTGGTaGACTACCTGCCCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATKHISW*TTCPAR
Trigger: CCTAGCAGGGCAGGTAGTCCACCAAGAAATGTGCTT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp TCCATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTaGCCCCGGCAGCCATCTCTCACCAAAGGAAGGTACACCTTGCTG +
Preference number: 2 (lower is better)
Translates to: SMEQVGMLALNQSPS*PRQPSLTKGRYTLL
Trigger: CAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAAAGGAGAGAGGGGGATaGGCTCGCACCCTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: VRMFTPGRGNATRGTHREKERGG*ARTLEK
Trigger: CTTCTCAAGGGTGCGAGCTCATCCCCCTCTCTCCTT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTTGTGCTTTGGGATCTaGCGTTCTTGGGTTTGCACA +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATLCFGI*RSWVCT
Trigger: TGTGCAAACCCAAGAACGTCAGATCCCAAAGCACAA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTCACTCCAAATGAAATaGTCCTCCCTTGGCCACCAA +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATSLQMK*SSLGHQ
Trigger: TTGGTGGCCAAGGGAGGAGCATTTCATTTGGAGTGA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGGGCCCCACTGGTCCTaGCTAGACTCTCACATGGGT +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFGPHWS*LDSHMG
Trigger: ACCCATGTGAGAGTCTAGGCAGGACCAGTGGGGCCC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAACGTGCATACACACGTaGGCACACGCCGGGACCACA +
Preference number: 2 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKTCIHT*AHAGTT
Trigger: TGTGGTCCCGGCGTGTGCTCACGTGTGTATGCACGT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCCGGGAGTTCAGTACTaGGGACCGTCAGATGCTCTC +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFPGVQY*GPSDAL
Trigger: GAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGCAGGTGGAGAAAGGTaGGTCTGCAAGGGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYAGGER*VCKGSA
Trigger: GGCACTGCCCTTGCAGACTCACCTTTCTCCACCTGC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGAACCTGAACATTTTCTaGTGCGTATTTGACATCACT +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRNLNIF*CVFDIT
Trigger: AGTGATGTCAAATACGCATCAGAAAATGTTCAGGTT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCCTGCTAGGATACAGTaGAAGATCTGTCTGTCAGTT +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATPARIQ*KICLSV
Trigger: AACTGACAGACAGATCTTTCACTGTATCCTAGCAGG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTGTTTGTGTGTAAGGTaGATCACCAGCCTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATCLCVR*ITSLKG
Trigger: TCCTTTCAGGCTGGTGATGCACCTTACACACAAACA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAGCATCAACTCCGCATaGATACTTTGCACACACATC +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATSINSA*ILCTHI
Trigger: GATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGAAGGTACACCTTGCTaGGTTACCCCATATATCAGA +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATEGTPC*VTPYIR
Trigger: TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCACATTAATGGGTTTTaGATTGGAATTTCCCTCACA +
Preference number: 2 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRHINGF*IGISLT
Trigger: TGTGAGGGAAATTCCAATCCAAAACCCATTAATGTG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp CCGTCTTTGCCCCGGCAGCCATCTCTCACCAAAGGAAGGTACACCTaGCTGGGTTACCCCATATATCAGATACATCATGACAGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: PSLPRQPSLTKGRYT*LGYPIYQIHHDSLE
Trigger: TTCCAGGCTGTCATGATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCTGCCGGGGCAAAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCCCTTATCCAAAATATaGAAGCAGCAGCTATTGGTC +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATPLSKI*KQQLLV
Trigger: GACCAATAGCTGCTGCTTTCATATTTTGGATAAGGG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCATAATCACTCCAAATaGAATGCTCCTCCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQHNHSK*NAPPLA
Trigger: GGCCAAGGGAGGAGCATTTCATTTGGAGTGATTATG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTCACTCCAAATGAAATaGTCCTCCCTTGGCCACCAA +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQSLQMK*SSLGHQ
Trigger: TTGGTGGCCAAGGGAGGAGCATTTCATTTGGAGTGA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACAAAGAGGCCACTTGTaGCTGACTCCCTCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRQRGHL*LTPSPS
Trigger: GGAAGGGGAGGGAGTCAGGCACAAGTGGCCTCTTTG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAGAGGGCTTGGAGGTTaGCATTATGACTCTATCCCA +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQRGLGG*HYDSIP
Trigger: TGGGATAGAGTCATAATGGCAACCTCCAAGCCCTCT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCCCAGGGCACCTTTGTaGTCACTTCAGGGGGATTCC +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYPRAPL*SLQGDS
Trigger: GGAATCCCCCTGAAGTGAGCACAAAGGTGCCCTGGG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAAGGAGCAGCAACTGTaGAAACCCCTTGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFKEQQL*KPLALQ
Trigger: CTGGAGGGCAAGGGGTTTCCACAGTTGCTGCTCCTT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp GGTGGAGGGGACCAAGACGTACTCTCAGTGCACCTCTCTCTTACATaGCTTAGATGTTCCCAAAGTCCATCCAGGTTGTTGTGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: GGGDQDVLSVHLSLT*LRCSQSPSRLLCFG
Trigger: CCCAAAGCACAACAACCTGGATGGACTTTGGGAACATCTAAGCAATGTAAGAGAGAGGTGCACTGAGAGTACGTCTTGGTCCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTTTTGTCTTTTATACTaGAGCTCAGACACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGFCLLY*SSDTSK
Trigger: TTTGCTGGTGTCTGAGCTTCAGTATAAAAGACAAAA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATACGTGCATACACACGTaGGCACACGCCGGGACCACA +
Preference number: 2 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHTCIHT*AHAGTT
Trigger: TGTGGTCCCGGCGTGTGCTCACGTGTGTATGCACGT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTTCTTAATCAAGAATTaGGAGGGCTTGGAGGTTGCC +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQFLIKN*EGLEVA
Trigger: GGCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCACAGCTCCTAAAACCTaGACATTTTCTGATGCGTAT +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATTAPKT*TFSDAY
Trigger: ATACGCATCAGAAAATGTTCAGGTTTTAGGAGCTGT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAATCAAAGCCCGTCTTTaGCCCGGCAGCCATCTCTCA +
Preference number: 2 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKIKARL*PGSHLS
Trigger: TGAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGAT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCTGTTCCTGAATATGTaGATGGGTGCACACTTATTT +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATLFLNM*MGAHLF
Trigger: AAATAAGTGTGCACCCATGCACATATTCAGGAACAG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAAAAACACAAAATCCTaGTTTGAAACCGTCGTTGCC +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATKNTKS*FETVVA
Trigger: GGCAACGACGGTTTCAAACCAGGATTTTGTGTTTTT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTTCGGAAGTTCTTGGTaGTGTGTAAGGTCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATFGSSW*CVRSFS
Trigger: TGAAAAAGACCTTACACACCACCAAGAACTTCCGAA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTTTGAGCAGCTGTGGTaGTTCTTTTTGCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATFEQLW*FFLQRE
Trigger: TTCTCTTTGCAAAAAGAACCACCACAGCTGCTCAAA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp TTGAAACCGTCGTTGCCCCAAAGGAGCAGCAACTGTGGAAACCCCTaGCCCTCCAGGTTCACAGTTAAATCCTCTGCAGGACTAGTTAAA +
Preference number: 2 (lower is better)
Translates to: LKPSLPQRSSNCGNP*PSRFTVKSSAGLVK
Trigger: TTTAACTAGTCCTGCAGAGGATTTAACTGTGAACCTGGAGGGCAAGGGGTTTCCACAGTTGCTGCTCCTTTGGGGCAACGACGGTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTTTTGTCTTTTATACTaGAGCTCAGACACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: KSCSTFDPALPTHRAEATFCLLY*SSDTSK
Trigger: TTTGCTGGTGTCTGAGCTTCAGTATAAAAGACAAAA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGATACACACGTTCCCTaGTTCAGACCGGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRDTHVP*FRPVPG
Trigger: ACCTGGAACCGGTCTGAATCAGGGAACGTGTGTATC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATACCTTCCAGCAGACCTaGTACCTGAACCAGACCATC +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYTFQQT*YLNQTI
Trigger: GATGGTCTGGTTCAGGTACCAGGTCTGCTGGAAGGT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTTCTCCAGGGCAGGTaGAGAAAGGTGAGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFFLQGR*RKVSLQ
Trigger: TTGCAGACTCACCTTTCTCCACCTGCCCTGGAGAAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGGCATTCGAATCAGCTaGTACACACGTTCCCTGATT +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFGIRIS*YTRSLI
Trigger: AATCAGGGAACGTGTGTATCAGCTGATTCGAATGCC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAACTGTGGAAACCCCTTaGCCTCCAGGTTCACAGTTA +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRTVETP*PPGSQL
Trigger: TAACTGTGAACCTGGAGGGCAAGGGGTTTCCACAGT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAGAGGAAAGCGAAAATaGGAACCCCTGCCCGCCCCC +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHRGKRK*EPLPAP
Trigger: GGGGGCGGGCAGGGGTTCCCATTTTCGCTTTCCTCT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAAGGAGCAGCAACTGTaGAAACCCCTTGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHKEQQL*KPLALQ
Trigger: CTGGAGGGCAAGGGGTTTCCACAGTTGCTGCTCCTT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp ACCTTCATGAGCCAATTCCCAAAGCATCAACTCCGCATGGATACTTaGCACACACATCAGCCGTGTCTAATGGACACACACACGTGCATA +
Preference number: 2 (lower is better)
Translates to: TFMSQFPKHQLRMDT*HTHQPCLMDTHTCI
Trigger: TATGCACGTGTGTGTGTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTTTGGGAATTGGCTCATGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCTGAGGCTAGACTTCTaGCACAAGAAGAATCTGTCG +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYLRLDF*HKKNLS
Trigger: CGACAGATTCTTCTTGTGTCAGAAGTCTAGCCTCAG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCATAATCACTCCAAATaGAATGCTCCTCCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYHNHSK*NAPPLA
Trigger: GGCCAAGGGAGGAGCATTTCATTTGGAGTGATTATG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAACACTGTAAGCACCTaGGCATTCAGCTCAGGCACC +
Preference number: 2 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHNTVST*AFSSGT
Trigger: GGTGCCTGAGCTGAATGCTCAGGTGCTTACAGTGTT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGTTCACTGTGTTCTTTaGGCAGCTGTGGTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYVHCVL*AAVVVL
Trigger: AAGAACCACCACAGCTGCTCAAAGAACACAGTGAAC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTCTTAATCAAGAATTaGGAGGGCTTGGAGGTTGCC +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFFLIKN*EGLEVA
Trigger: GGCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGATTTGTAAAAACAGGTaGTTTCTTTCCATCTGCTGG +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQICKNR*FLSICW
Trigger: CCAGCAGATGGAAAGAAAGCACCTGTTTTTACAAAT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACAGGTTGTTGTGCTTTaGGATCTGACGTTCTTGGGT +
Preference number: 2 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKQVVVL*DLTFLG
Trigger: ACCCAAGAACGTCAGATCCCAAAGCACAACAACCTG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCAGGTTGTTGTGCTTTaGGATCTGACGTTCTTGGGT +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYQVVVL*DLTFLG
Trigger: ACCCAAGAACGTCAGATCCCAAAGCACAACAACCTG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGATAGCAATAGACAATTaGGATTCATGTCTACCTGTG +
Preference number: 2 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQIAIDN*DSCLPV
Trigger: CACAGGTAGACATGAATCCCAATTGTCTATTGCTAT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp TTTGCAAAGAGAAGAAACGGTGGATTCACGCCCATTCGGAAGTTCTaGGTGGTGTGTAAGGTCTTTTTCACGGTTTCTCCTCCAGACTCT +
Preference number: 2 (lower is better)
Translates to: FAKRRNGGFTPIRKF*VVCKVFFTVSPPDS
Trigger: AGAGTCTGGAGGAGAAACCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCACCGTTTCTTCTCTTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp TCTCACATGGGTTATCAAAGCTGCACAAGGTCCAATAATATCAGCTaGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGC +
Preference number: 2 (lower is better)
Translates to: SHMGYQSCTRSNNIS*RSVKPQHRGPRCCC
Trigger: GCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGATATTATTGGACCTTGTGCAGCTTTGATAACCCATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp ACTAAACAAGCTGTTCCTGAATATGTGCATGGGTGCACACTTATTTaGAGGCTCTTCCTTCCTTCTCCAATGGGACCAAGAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: TKQAVPEYVHGCTLI*RLFLPSPMGPRAPD
Trigger: ATCTGGGGCTCTTGGTCCCATTGGAGAAGGAAGGAAGAGCCTCAAAATAAGTGTGCACCCATGCACATATTCAGGAACAGCTTGTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTATAGGAACGATCTCTaGACTCCATTGGACATGGTA +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFYRNDL*TPLDMV
Trigger: TACCATGTCCAATGGAGTTCAGAGATCGTTCCTATA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACTTGTACCCAATCACTaGGGCTCCTCAGCAATATTT +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRLVPNH*GSSAIF
Trigger: AAATATTGCTGAGGAGCCTCAGTGATTGGGTACAAG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCCAATAATATCAGCTTaGGGTCAGTCAAACCCCAAC +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYPIISA*GQSNPN
Trigger: GTTGGGGTTTGACTGACCTCAAGCTGATATTATTGG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGATGCAGAGAGAAAGTaGTGTGCTTGGTATTCTCCT +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYDAERK*CAWYSP
Trigger: AGGAGAATACCAAGCACATCACTTTCTCTCTGCATC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAAAGACGTACTCTCAGTaGACCTCTCTCTTACATTGC +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRKTYSQ*TSLLHC
Trigger: GCAATGTAAGAGAGAGGTGCACTGAGAGTACGTCTT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAACCCAATAGCTGTTTaGTCTTTTCACTGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFNPIAV*SFHCGS
Trigger: ACTGCCACAGTGAAAAGAGCAAACAGCTATTGGGTT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCATGTCAAAGGAGGTTTaGAACCCAATAGCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFMSKEV*NPIAVC
Trigger: GCAAACAGCTATTGGGTTGCAAACCTCCTTTGACAT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAACTTGAAATTCTCCTaGAACAGGGCTGGGTGTTTT +
Preference number: 2 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFNLKFS*NRAGCF
Trigger: AAAACACCCAGCCCTGTTCCAGGAGAATTTCAAGTT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAAGCATCAACTCCGCATaGATACTTTGCACACACATC +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRSINSA*ILCTHI
Trigger: GATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCAGATGCTCTCAGGGTaGAGGGGACCAAGACGTACT +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHQMLSG*RGPRRT
Trigger: AGTACGTCTTGGTCCCCTCCACCCTGAGAGCATCTG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTTGGTATTCTCCTCCTaGAAGAAGGAACTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYLVFSS*KKELLC
Trigger: ACACAGGAGTTCCTTCTTCCAGGAGGAGAATACCAA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATAATAAGCACATTTCTTaGTGGACTACCTGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYNKHIS*WTTCPA
Trigger: AGCAGGGCAGGTAGTCCACCAAGAAATGTGCTTATT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACCCTTATCCAAAATATaGAAGCAGCAGCTATTGGTC +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRPLSKI*KQQLLV
Trigger: GACCAATAGCTGCTGCTTTCATATTTTGGATAAGGG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGTTCACTGTGTTCTTTaGGCAGCTGTGGTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHVHCVL*AAVVVL
Trigger: AAGAACCACCACAGCTGCTCAAAGAACACAGTGAAC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAATTTGTAAAAACAGGTaGTTTCTTTCCATCTGCTGG +
Preference number: 2 (lower is better)
Translates to: VRMFTPGRGNATRGTHREICKNR*FLSICW
Trigger: CCAGCAGATGGAAAGAAAGCACCTGTTTTTACAAAT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGAAGAAAAGGATCTATaGTCGCATAAAGGCCATACC +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYEEKDL*SHKGHT
Trigger: GGTATGGCCTTTATGCGAGCATAGATCCTTTTCTTC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAAACTTGAAATTCTCCTaGAACAGGGCTGGGTGTTTT +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRNLKFS*NRAGCF
Trigger: AAAACACCCAGCCCTGTTCCAGGAGAATTTCAAGTT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACCATTCGGAAGTTCTTaGTGGTGTGTAAGGTCTTTT +
Preference number: 2 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRPFGSS*WCVRSF
Trigger: AAAAGACCTTACACACCACCAAGAACTTCCGAATGG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATACTGTGGAAACCCCTTaGCCTCCAGGTTCACAGTTA +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHTVETP*PPGSQL
Trigger: TAACTGTGAACCTGGAGGGCAAGGGGTTTCCACAGT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTTCTTTGAGCAGCTGTaGTGGTTCTTTTTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYFFEQL*WFFLQR
Trigger: TCTTTGCAAAAAGAACCACCACAGCTGCTCAAAGAA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTATAGGAACGATCTCTaGACTCCATTGGACATGGTA +
Preference number: 2 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHYRNDL*TPLDMV
Trigger: TACCATGTCCAATGGAGTTCAGAGATCGTTCCTATA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAGCAGACCTGGTACCTaGACCAGACCATCCATAAAA +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHSRPGT*TRPSIK
Trigger: TTTTATGGATGGTCTGGTTCAGGTACCAGGTCTGCT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATATAGCAATAGACAATTaGGATTCATGTCTACCTGTG +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYIAIDN*DSCLPV
Trigger: CACAGGTAGACATGAATCCCAATTGTCTATTGCTAT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATATTCTTACTGGTCCCTaGCATTCGAATCAGCTGATA +
Preference number: 2 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHILTGP*HSNQLI
Trigger: TATCAGCTGATTCGAATGCCAGGGACCAGTAAGAAT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTACATCATGACAGCCTaGAACTTAGTTTATGTTTGG +
Preference number: 2 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYYIMTA*NLVYVW
Trigger: CCAAACATAAACTAAGTTCCAGGCTGTCATGATGTA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCTTGTACCCAATCACTaGGGCTCCTCAGCAATATTT +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHLVPNH*GSSAIF
Trigger: AAATATTGCTGAGGAGCCTCAGTGATTGGGTACAAG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTGTGGTGGTTCTTTTTaGAAAGAGAAGAAACGGTGG +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHCGGSF*KEKKRW
Trigger: CCACCGTTTCTTCTCTTTGCAAAAAGAACCACCACA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCCATTCGGAAGTTCTTaGTGGTGTGTAAGGTCTTTT +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHPFGSS*WCVRSF
Trigger: AAAAGACCTTACACACCACCAAGAACTTCCGAATGG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCCTCAAAATTCTTACTaGTCCCTGGCATTCGAATCA +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHPQNSY*SLAFES
Trigger: TGATTCGAATGCCAGGGACCAGTAAGAATTTTGAGG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTTCTTTGAGCAGCTGTaGTGGTTCTTTTTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHFFEQL*WFFLQR
Trigger: TCTTTGCAAAAAGAACCACCACAGCTGCTCAAAGAA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 90 bp TACAAACTCCCAGGACAACCGTGTCTTTCTAGGACCAAAGTTTTATaGTTACAAAGTCAACATTTCCTAATGTCAAAGGAGGTTTGCAAC +
Preference number: 2 (lower is better)
Translates to: YKLPGQPCLSRTKVL*LQSQHFLMSKEVCN
Trigger: GTTGCAAACCTCCTTTGACATTAGGAAATGTTGACTTTGTAACAATAAAACTTTGGTCCTAGAAAGACACGGTTGTCCTGGGAGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGAGCCCAGGGCACCTTaGTGCTCACTTCAGGGGGAT +
Preference number: 3 (lower is better)
Translates to: AAAHLILRCQRTGPRPPREPRAP*CSLQGD
Trigger: ATCCCCCTGAAGTGAGCACAAAGGTGCCCTGGGCTC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCAAGAGCAGCAAGATTaGGGCCCCACTGGTCCTGCC +
Preference number: 3 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRQEQQD*GPTGPA
Trigger: GGCAGGACCAGTGGGGCCCAAATCTTGCTGCTCTTG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp TCACCGGGCTCAGAGCAGCTTCCGGGAGTTCAGTACTaGGGACCGTCAGATGCTCTCAGGGTGGAGGGGACC +
Preference number: 3 (lower is better)
Translates to: SPGSEQLPGVQY*GPSDALRVEGT
Trigger: GGTCCCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGCTCTGAGCCCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGATGAGCTCGCACCCTaGAGAAGAACCTTCATGAGC +
Preference number: 3 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRDELAP*RRTFMS
Trigger: GCTCATGAAGGTTCTTCTCAAGGGTGCGAGCTCATC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGAGCCCAGGGCACCTTaGTGCTCACTTCAGGGGGAT +
Preference number: 3 (lower is better)
Translates to: KSCSTFDPALPTHRAEATEPRAP*CSLQGD
Trigger: ATCCCCCTGAAGTGAGCACAAAGGTGCCCTGGGCTC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCTCCGCATGGATACTTaGCACACACATCAGCCGTGT +
Preference number: 3 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGLRMDT*HTHQPC
Trigger: ACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGAGAAAGTGATGTGCTaGGTATTCTCCTCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: AAAHLILRCQRTGPRPPREKVMC*VFSSWK
Trigger: CTTCCAGGAGGAGAATACCAAGCACATCACTTTCTC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp AGGGGGATTCCATGGAACAGGTGGGAATGCTTGCTCTaGATCAAAGCCCGTCTTTGCCCCGGCAGCCATCTC +
Preference number: 3 (lower is better)
Translates to: RGIPWNRWECLL*IKARLCPGSHL
Trigger: GAGATGGCTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCATGGAATCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 72 bp ACTTCAGGGGGATTCCATGGAACAGGTGGGAATGCTTaGTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCC +
Preference number: 3 (lower is better)
Translates to: TSGGFHGTGGNA*SESKPVFAPAA
Trigger: GGCTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCATGGAATCCCCCTGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 72 bp TTTTCTGCAAAAGCTGCAGCACATTTGATCCTGCGTTaGCAACGCACAGGGCCGAGGCCACCCAGGCACACA +
Preference number: 3 (lower is better)
Translates to: FSAKAAAHLILR*QRTGPRPPRHT
Trigger: TGTGTGCCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTTGCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 72 bp GAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTaGAGGGGACCAAGACGTACTCTCAGTGCACCTCTC +
Preference number: 3 (lower is better)
Translates to: EFSTEDRQMLSG*RGPRRTLSAPL
Trigger: GAGAGGTGCACTGAGAGTACGTCTTGGTCCCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTCCAATAATATCAGCTaGAGGTCAGTCAAACCCCAA +
Preference number: 3 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSNNIS*RSVKPQ
Trigger: TTGGGGTTTGACTGACCTCAAGCTGATATTATTGGA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGAATGTCAAAGGAGGTTaGCAACCCAATAGCTGTTTG +
Preference number: 3 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRNVKGG*QPNSCL
Trigger: CAAACAGCTATTGGGTTGCAAACCTCCTTTGACATT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTTTTCTGATGCGTATTaGACATCACTGATGCAGAGA +
Preference number: 3 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRFSDAY*TSLMQR
Trigger: TCTCTGCATCAGTGATGTCAAATACGCATCAGAAAA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGTTCTTAATCAAGAATaGAGAGGGCTTGGAGGTTGC +
Preference number: 3 (lower is better)
Translates to: KSCSTFDPALPTHRAEATVLNQE*RGLGGC
Trigger: GCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAAC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAATCAAAGCCCGTCTTaGCCCCGGCAGCCATCTCTC +
Preference number: 3 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFNQSPS*PRQPSL
Trigger: GAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGATT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCACTGGTGAATCCCATTaGCAAGGGGCAGGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFTGESH*QGAGPA
Trigger: TGCTGGGCCTGCCCCTTGCAAATGGGATTCACCAGT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp TTTCTGAGTTGTTTTCTGCAAAAGCTGCAGCACATTTaGTCCTGCGTTGCCAACGCACAGGGCCGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: FLSCFLQKLQHI*SCVANAQGRGH
Trigger: GTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTTGCAGAAAACAACTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGACACAAAATCCTGGTTaGAAACCGTCGTTGCCCCAA +
Preference number: 3 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQTQNPG*KPSLPQ
Trigger: TTGGGGCAACGACGGTTTCAAACCAGGATTTTGTGT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCACCTCTCTCTTACATaGCTTAGATGTTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: KSCSTFDPALPTHRAEATHLSLT*LRCSQS
Trigger: ACTTTGGGAACATCTAAGCAATGTAAGAGAGAGGTG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCCCATTCGGAAGTTCTaGGTGGTGTGTAAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQPIRKF*VVCKVF
Trigger: AAAGACCTTACACACCACCAAGAACTTCCGAATGGG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGCAGGACTAGTTAAATaGGTAACCAAACGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQAGLVK*VTKRVH
Trigger: GTGGACTCGTTTGGTTACCAATTTAACTAGTCCTGC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGAACTGTGGAAACCCCTaGCCCTCCAGGTTCACAGTT +
Preference number: 3 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRNCGNP*PSRFTV
Trigger: AACTGTGAACCTGGAGGGCAAGGGGTTTCCACAGTT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGGTTTGAAACCGTCGTaGCCCCAAAGGAGCAGCAAC +
Preference number: 3 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYGLKPS*PQRSSN
Trigger: GTTGCTGCTCCTTTGGGGCAACGACGGTTTCAAACC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCTCCGCATGGATACTTaGCACACACATCAGCCGTGT +
Preference number: 3 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFLRMDT*HTHQPC
Trigger: ACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCCAGGTTGTTGTGCTTaGGGATCTGACGTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFPGCCA*GSDVLG
Trigger: CCCAAGAACGTCAGATCCCAAAGCACAACAACCTGG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAACTGTGGAAACCCCTaGCCCTCCAGGTTCACAGTT +
Preference number: 3 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKNCGNP*PSRFTV
Trigger: AACTGTGAACCTGGAGGGCAAGGGGTTTCCACAGTT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACCAGGTTGTTGTGCTTaGGGATCTGACGTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRPGCCA*GSDVLG
Trigger: CCCAAGAACGTCAGATCCCAAAGCACAACAACCTGG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 72 bp GAAACGGTGGATTCACGCCCATTCGGAAGTTCTTGGTaGTGTGTAAGGTCTTTTTCACGGTTTCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: ETVDSRPFGSSW*CVRSFSRFLLQ
Trigger: CTGGAGGAGAAACCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCACCGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCACACAAAATCCTGGTTaGAAACCGTCGTTGCCCCAA +
Preference number: 3 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFTQNPG*KPSLPQ
Trigger: TTGGGGCAACGACGGTTTCAAACCAGGATTTTGTGT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAGTTCACTGTGTTCTTaGAGCAGCTGTGGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFSSLCS*SSCGGS
Trigger: AGAACCACCACAGCTGCTCAAAGAACACAGTGAACT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGATGGGCGATGATTTTTaGATGAACCAAAGTGATGAG +
Preference number: 3 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQMGDDF*MNQSDE
Trigger: CTCATCACTTTGGTTCATCAAAAAATCATCGCCCAT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp TTATCCGAACAGGAACCTTCCAGCAGACCTGGTACCTaGACCAGACCATCCATAAAACCTAGTCTCTCACAC +
Preference number: 3 (lower is better)
Translates to: LSEQEPSSRPGT*TRPSIKPSLSH
Trigger: GTGTGAGAGACTAGGTTTTATGGATGGTCTGGTTCAGGTACCAGGTCTGCTGGAAGGTTCCTGTTCGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp TCAAAATTCTTACTGGTCCCTGGCATTCGAATCAGCTaGTACACACGTTCCCTGATTCAGACCGGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SKFLLVPGIRIS*YTRSLIQTGSR
Trigger: CCTGGAACCGGTCTGAATCAGGGAACGTGTGTATCAGCTGATTCGAATGCCAGGGACCAGTAAGAATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 72 bp GAAGAAACGGTGGATTCACGCCCATTCGGAAGTTCTTaGTGGTGTGTAAGGTCTTTTTCACGGTTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: EETVDSRPFGSS*WCVRSFSRFLL
Trigger: GAGGAGAAACCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCACCGTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 72 bp ATCCCAACTCCCTCCCTCAAAATTCTTACTGGTCCCTaGCATTCGAATCAGCTGATACACACGTTCCCTGAT +
Preference number: 3 (lower is better)
Translates to: IPTPSLKILTGP*HSNQLIHTFPD
Trigger: ATCAGGGAACGTGTGTATCAGCTGATTCGAATGCCAGGGACCAGTAAGAATTTTGAGGGAGGGAGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CCA 72 bp CTTCTCCATCCCAACTCCCTCCCTCAAAATTCTTACTaGTCCCTGGCATTCGAATCAGCTGATACACACGTT +
Preference number: 3 (lower is better)
Translates to: LLHPNSLPQNSY*SLAFESADTHV
Trigger: AACGTGTGTATCAGCTGATTCGAATGCCAGGGACCAGTAAGAATTTTGAGGGAGGGAGTTGGGATGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGATGAGCTCGCACCCTaGAGAAGAACCTTCATGAGC +
Preference number: 3 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHDELAP*RRTFMS
Trigger: GCTCATGAAGGTTCTTCTCAAGGGTGCGAGCTCATC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACCCATTCGGAAGTTCTaGGTGGTGTGTAAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRPIRKF*VVCKVF
Trigger: AAAGACCTTACACACCACCAAGAACTTCCGAATGGG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCAACCCAATAGCTGTTaGCTCTTTTCACTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYQPNSC*LFSLWQ
Trigger: CTGCCACAGTGAAAAGAGCAAACAGCTATTGGGTTG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGCAGGACTAGTTAAATaGGTAACCAAACGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRAGLVK*VTKRVH
Trigger: GTGGACTCGTTTGGTTACCAATTTAACTAGTCCTGC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGTTCTTAATCAAGAATaGAGAGGGCTTGGAGGTTGC +
Preference number: 3 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRVLNQE*RGLGGC
Trigger: GCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAAC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAAAGGAAGGTACACCTaGCTGGGTTACCCCATATAT +
Preference number: 3 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKKGRYT*LGYPIY
Trigger: ATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp AGCACACGCCGGGACCACAGACCCTTATCCAAAATATaGAAGCAGCAGCTATTGGTCAATTTGAGGAACTCA +
Preference number: 3 (lower is better)
Translates to: STRRDHRPLSKI*KQQLLVNLRNS
Trigger: TGAGTTCCTCAAATTGACCAATAGCTGCTGCTTTCATATTTTGGATAAGGGTCTGTGGTCCCGGCGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp TCCCAAAGTCCATCCAGGTTGTTGTGCTTTGGGATCTaGCGTTCTTGGGTTTGCACAATAACGGTTAGGATG +
Preference number: 3 (lower is better)
Translates to: SQSPSRLLCFGI*RSWVCTITVRM
Trigger: CATCCTAACCGTTATTGTGCAAACCCAAGAACGTCAGATCCCAAAGCACAACAACCTGGATGGACTTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp TCCCTGGCATTCGAATCAGCTGATACACACGTTCCCTaGTTCAGACCGGTTCCAGGTAGAATTCTGAAATCT +
Preference number: 3 (lower is better)
Translates to: SLAFESADTHVP*FRPVPGRILKS
Trigger: AGATTTCAGAATTCTACCTGGAACCGGTCTGAATCAGGGAACGTGTGTATCAGCTGATTCGAATGCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp ATTTCTTGGTGGACTACCTGCCCTGCTAGGATACAGTaGAAGATCTGTCTGTCAGTTGGTAACATAGTCCCC +
Preference number: 3 (lower is better)
Translates to: ISWWTTCPARIQ*KICLSVGNIVP
Trigger: GGGGACTATGTTACCAACTGACAGACAGATCTTTCACTGTATCCTAGCAGGGCAGGTAGTCCACCAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp GTTATCAAAGCTGCACAAGGTCCAATAATATCAGCTTaGGGTCAGTCAAACCCCAACACAGAGGTCCAAGGT +
Preference number: 3 (lower is better)
Translates to: VIKAAQGPIISA*GQSNPNTEVQG
Trigger: ACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGATATTATTGGACCTTGTGCAGCTTTGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATTAATGGGTTTTGGATaGGAATTTCCCTCACATGCT +
Preference number: 3 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKLMGFG*EFPSHA
Trigger: AGCATGTGAGGGAAATTCCAATCCAAAACCCATTAA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTGGGATCTGACGTTCTaGGGTTTGCACAATAACGGT +
Preference number: 3 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHWDLTF*GLHNNG
Trigger: ACCGTTATTGTGCAAACCCAAGAACGTCAGATCCCA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAGTTCACTGTGTTCTTaGAGCAGCTGTGGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHSSLCS*SSCGGS
Trigger: AGAACCACCACAGCTGCTCAAAGAACACAGTGAACT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp TGGGATTCATGTCTACCTGTGTTCTTAATCAAGAATTaGGAGGGCTTGGAGGTTGCCATTATGACTCTATCC +
Preference number: 3 (lower is better)
Translates to: WDSCLPVFLIKN*EGLEVAIMTLS
Trigger: GGATAGAGTCATAATGGCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAACACAGGTAGACATGAATCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 72 bp AAGACTAAACAAGCTGTTCCTGAATATGTGCATGGGTaGACACTTATTTTGAGGCTCTTCCTTCCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: KTKQAVPEYVHG*TLILRLFLPSP
Trigger: TGGAGAAGGAAGGAAGAGCCTCAAAATAAGTGTGCACCCATGCACATATTCAGGAACAGCTTGTTTAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp CAGATAGAAATTTGGCTGGTGGCTGGTTCTGGACCTTaGCTAGTATCAGAAGGTAAAAGTAAGCTCAAAAAG +
Preference number: 3 (lower is better)
Translates to: QIEIWLVAGSGP*LVSEGKSKLKK
Trigger: CTTTTTGAGCTTACTTTTACCTTCTGATACTAGTCAAGGTCCAGAACCAGCCACCAGCCAAATTTCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 72 bp TTAAAAAGACATTGCATTAGGTGTTTGTGTGTAAGGTaGATCACCAGCCTGAAAGGAGTGGGCATAAACCAT +
Preference number: 3 (lower is better)
Translates to: LKRHCIRCLCVR*ITSLKGVGINH
Trigger: ATGGTTTATGCCCACTCCTTTCAGGCTGGTGATGCACCTTACACACAAACACCTAATGCAATGTCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR TCA 72 bp AATGATGAAACAGCACCTAGGACAGCTCCTAAAACCTaGACATTTTCTGATGCGTATTTGACATCACTGATG +
Preference number: 3 (lower is better)
Translates to: NDETAPRTAPKT*TFSDAYLTSLM
Trigger: CATCAGTGATGTCAAATACGCATCAGAAAATGTTCAGGTTTTAGGAGCTGTCCTAGGTGCTGTTTCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR GCA 72 bp TTACAAAGTCAACATTTCCTAATGTCAAAGGAGGTTTaGAACCCAATAGCTGTTTGCTCTTTTCACTGTGGC +
Preference number: 3 (lower is better)
Translates to: LQSQHFLMSKEV*NPIAVCSFHCG
Trigger: GCCACAGTGAAAAGAGCAAACAGCTATTGGGTTGCAAACCTCCTTTGACATTAGGAAATGTTGACTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCCGTCCAAGAGCCGTTaGCCGCAAGGGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRPSKSR*PQGRWP
Trigger: GGGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGCTGTAGTTCCCCGGTaGCAGCCCACGCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRAVVPR*QPTQPA
Trigger: TGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCGGGGCAGTTGGTCTTaGCCTTCGCGGTACCCGGAC +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRRGSWS*PSRYPD
Trigger: GTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCGGGCTGAGAACAGTTaGCCAGGCACTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRRAENS*PGTRCG
Trigger: GCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGGCAGGCCACGCACTTaGTGGGGTCGTCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATGRPRT*WGRRAE
Trigger: CTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTCCTCAGGGGTGTCCTaGTTGCAAGCCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSSGVS*LQACSS
Trigger: CGAGCTGCAGGCTTGCAACCAGGACACCCCTGAGGA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTGCCCGCAAGGGAGGTaGCCCGGATTCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGCPQGR*PGFARC
Trigger: ACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGCA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGACCACCAGCGTGGGCTaGCCCTTGGACACCACTCCC +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGTTSVG*PLDTTP
Trigger: GGGAGTGGTGTCCAAGGGCCAGCCCACGCTGGTGGT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCCGGGAGTTCAGTACTaGGGACCGTCAGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRPGVQY*GPSDAL
Trigger: GAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCCCAGGGTCACAGGATaGCCTATGCAGACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRPRVTG*PMQTLV
Trigger: CACAAGGGTCTGCATAGGTCATCCTGTGACCCTGGG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTGTTCCGGATATCCATaGCGGGACACACCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRCSGYP*RDTPLR
Trigger: CCGGAGAGGTGTGTCCCGGCATGGATATCCGGAACA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCCAGAGCGAAGTGCTTaGGGGAGACGCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRPERSA*GRRRDA
Trigger: TGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTCGCCTTCTAGGAGGTaGCACACCTTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSPSRR*HTLGQG
Trigger: TCCCTGTCCCAAGGTGTGCCACCTCCTAGAAGGCGA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGGAAAGCTGCCACCGTaGGCACGGCCACCGTCACAT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGGKLPP*ARPPSH
Trigger: ATGTGACGGTGGCCGTGCCCACGGTGGCAGCTTTCC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGCTCCTCCGGACTCGTaGGCACGCTGGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATAPPDS*ARWSRK
Trigger: CTTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGGCGGTGCAGCCGTGTaGCTTACAGATGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATGGAAV*LTDGRA
Trigger: TGCCCGACCATCTGTAAGTCACACGGCTGCACCGCC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGCTCTCGAAGGAGGGTaGTCTTCTCTCGAGACACCT +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRALEGG*SSLETP
Trigger: AGGTGTCTCGAGAGAAGATCACCCTCCTTCGAGAGC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACCCGGAGCTCCGCGCTaGGCCCGGGACTGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREPGAPR*ARDCLS
Trigger: CGAGAGACAGTCCCGGGCGCAGCGCGGAGCTCCGGG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCATCGTTCGACAAACTaGCCGTTGATGACGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRHRSTN*PLMTVA
Trigger: CGCCACCGTCATCAACGGGCAGTTTGTCGAACGATG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCAGGGGTGTCCTGGTTaGAAGCCTGCAGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGQGCPG*KPAARC
Trigger: GCATCGAGCTGCAGGCTTGCAACCAGGACACCCCTG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTGCCCTCATACACCATaGCGAAGGAGCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGCPHTP*RRSPAP
Trigger: TGGGGCAGGGCTCCTTCGGCATGGTGTATGAGGGCA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGCTGCCAGGTCCCGATaGACAAACTTCTTGGCGTTC +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRAARSR*TNFLAF
Trigger: GAACGCCAAGAAGTTTGTGCATCGGGACCTGGCAGC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGTTGGACCTCAGGGGTaGGTCAATGTCTACCACCGT +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRVGPQG*VNVYHR
Trigger: ACGGTGGTAGACATTGACCCACCCCTGAGGTCCAAC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGGTGGTTCTGTGATTTaGGGTCGTTGGACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRGGSVI*GRWTSG
Trigger: CCCTGAGGTCCAACGACCCCAAATCACAGAACCACC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTTCAGACTCGAATGGTaGAGACCAGGTCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRFRLEW*RPGPRG
Trigger: CCCTCGAGGACCTGGTCTCCACCATTCGAGTCTGAA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGCGTGGGCTGGCCCTTaGACACCACTCCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQAWAGP*TPLPGG
Trigger: GCCTCCTGGGAGTGGTGTCCAAGGGCCAGCCCACGC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGAACACTGTAAGCACCTaGGCATTCAGCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRNTVST*AFSSGT
Trigger: GGTGCCTGAGCTGAATGCTCAGGTGCTTACAGTGTT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCCCGGTGGCCATGGCTaGGGGAGCGCGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFPGGHG*GSAGSP
Trigger: AGGAGACCCCGCGCTCCCGCAGCCATGGCCACCGGG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAGAGGCCTTCGGCGGTaGAGCCGTGTGACTTACAGA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGRGLRR*SRVTYR
Trigger: TCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCGTTCCAGAGCGAAGTaGTTGCGGGAGACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGRSRAK*LRETQR
Trigger: TCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCTTCAGGGACTCCGGTaGCATCCACCGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATLQGLR*HPPYRE
Trigger: CTCCCTGTACGGTGGATGGCACCGGAGTCCCTGAAG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACCACCCAAGAGGCGCTaGGGGCCGCGCGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREPPKRR*GPRVLL
Trigger: GAGAAGGACGCGCGGCCCCCAGCGCCTCTTGGGTGG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGATGCCTGGTCCCCATTaGTCTTCAGGGCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRMPGPH*SSGQCR
Trigger: ACGACATTGCCCTGAAGACCAATGGGGACCAGGCAT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCCACCGTCCAACTGTTaGAACCACACGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGPPSNC*NHTHPA
Trigger: GGCAGGATGCGTGTGGTTCCAACAGTTGGACGGTGG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGTTTCCGAGATGGCCTaGGGACGAAAACCACGTTGT +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRVSEMA*GRKPRC
Trigger: ACAACGTGGTTTTCGTCCCCAGGCCATCTCGGAAAC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341500.9
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCCCTGGGTGGTTCTGTaGTTTGGGGTCGTTGGACCT +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATPWVVL*FGVVGP
Trigger: AGGTCCAACGACCCCAAATCACAGAACCACCCAGGG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGGAAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACACTGGGTCCAGGGCTTaGGACCCCGCATCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RKLRVTLLVAALTGGSGYTGSRA*DPASAT
Trigger: GGTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGT...GTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGTCGCAAGCCGGAGATaGCCAGCGACTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATVASRR*PATPCS
Trigger: TGAACAAGGAGTCGCTGGTCATCTCCGGCTTGCGAC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACTGAGCGGAGGCCCTTaGGGTGGTGGCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRLSGGP*GGGPDP
Trigger: GGGGTCGGGGCCACCACCGCAAGGGCCTCCGCTCAG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGGCCCGCGGGGGTCATaGTCCGAGGCGGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKGPRGS*SEAATQ
Trigger: TTGGGTGGCCGCCTCGGAGCATGACCCCCGCGGGCC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTTCTTGCATTTGTGGTaGAGGTCCTGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRFLHLW*RSWQKL
Trigger: CAGCTTCTGCCAGGACCTGCACCACAAATGCAAGAA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCCAGAGCGAAGTGCTTaGGGGAGACGCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATPERSA*GRRRDA
Trigger: TGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCAGGGAGCAGACCCTTaGCCCCTTTCCGGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGQGADP*PLSGSN
Trigger: ATTACTACCGGAAAGGGGGCAAGGGTCTGCTCCCTG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCTGGTGAATCCCATTTaGAAGGGGCAGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATLVNPI*KGQAQH
Trigger: GTGCTGGGCCTGCCCCTTGCAAATGGGATTCACCAG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCATTTGATCCTGCGTTaGCAACGCACAGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATHLILR*QRTGPR
Trigger: CCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAGGCCACGCACTTGGTaGGGTCGTCGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQRPRTW*GRRAEN
Trigger: GTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGGCAGGCCACGCACTTaGTGGGGTCGTCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREGRPRT*WGRRAE
Trigger: CTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCATCCTCGGAGCTCCTaGGCAGACGTCACCGAGTCG +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQHPRSS*ADVTES
Trigger: CGACTCGGTGACGTCTGCCCAGGAGCTCCGAGGATG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTCCCAGCGGCCCATCTaGCTGCCTCTTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATSQRPI*LPLSQE
Trigger: TTCCTGAGAAAGAGGCAGCCAGATGGGCCGCTGGGA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGATGCACAAACTTCTTaGCGTTCAGGTAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRDAQTS*RSGRPS
Trigger: GGATGGCCTACCTGAACGCCAAGAAGTTTGTGCATC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAAGGAGCAGCAACTGTaGAAACCCCTTGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGKEQQL*KPLALQ
Trigger: CTGGAGGGCAAGGGGTTTCCACAGTTGCTGCTCCTT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAGATTTGGGCCCCACTaGTCCTGCCTAGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGRFGPH*SCLDSH
Trigger: GTGAGAGTCTAGGCAGGACCAGTGGGGCCCAAATCT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGCTGGTGGCTGGTTCTaGACCTTGACTAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRAGGWF*TLTSIR
Trigger: TCTGATACTAGTCAAGGTCCAGAACCAGCCACCAGC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAGAGGCCGAGTTCCTTaGGGTGAACCATCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGRGRVP*GEPSRR
Trigger: TCTTCGAGATGGTTCACCTCAAGGAACTCGGCCTCT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGCAGCTTCAGCCCTTTaGGGCAATAATCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGAASAL*GNNPAR
Trigger: TCGAGCTGGATTATTGCCTCAAAGGGCTGAAGCTGC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCGATGCGATAGCCCGTaGAGTGTCGCAAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQRCDSP*SVASRR
Trigger: TCTCCGGCTTGCGACACTTCACGGGCTATCGCATCG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGCTGTAGTTCCCCGGTaGCAGCCCACGCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREAVVPR*QPTQPA
Trigger: TGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTGTCAGAAGAAGTGGTaGAGACCCCATCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGCQKKW*RPHPSG
Trigger: CCCTGAAGGATGGGGTCTTCACCACTTCTTCTGACA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAACACTGTAAGCACCTaGGCATTCAGCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGNTVST*AFSSGT
Trigger: GGTGCCTGAGCTGAATGCTCAGGTGCTTACAGTGTT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTGCTGGAAGATTTTCTaGAGTGACACCCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRCWKIF*SDTPLC
Trigger: ACAGAGAGGGGTGTCACTTCAGAAAATCTTCCAGCA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAGGTCTCCACACACCTaGCGTCCAGGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATRSPHT*RPGRSC
Trigger: GCAACTTCTACCTGGACGGCAGGTGTGTGGAGACCT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGCCTCCGCGAGTTCTTaGATTTGTGGTGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATASASS*ICGAGP
Trigger: AGGACCTGCACCACAAATGCAAGAACTCGCGGAGGC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTGCCCTCATACACCATaGCGAAGGAGCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQCPHTP*RRSPAP
Trigger: TGGGGCAGGGCTCCTTCGGCATGGTGTATGAGGGCA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAATCATGGGCGACCATaGAGTTTCTCGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGNHGRP*SFSLPG
Trigger: ACCTGGCAGCGAGAAACTGCATGGTCGCCCATGATT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGACTCGTGGGCACGCTaGTCGAGGAAGTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQDSWAR*SRKCWG
Trigger: TCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAACCACCAGCGTGGGCTaGCCCTTGGACACCACTCCC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRETTSVG*PLDTTP
Trigger: GGGAGTGGTGTCCAAGGGCCAGCCCACGCTGGTGGT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGCAGGTTGTTGTGCTTTaGGATCTGACGTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRQVVVL*DLTFLG
Trigger: ACCCAAGAACGTCAGATCCCAAAGCACAACAACCTG...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAAGAGCAGCAAGATTTaGGCCCCACTGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATKSSKI*APLVLP
Trigger: AGGCAGGACCAGTGGGGCCCAAATCTTGCTGCTCTT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGTTAAAGAACAGTCGTaGTCCCCGGATGACCGTGAG +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATVKEQS*SPDDRE
Trigger: CTCACGGTCATCCGGGGATCACGACTGTTCTTTAAC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGGACAGAACCCCGGGTaGTGTTCATCAGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATGQNPG*CSSGCR
Trigger: TCTACAACCTGATGAACATCACCCGGGGTTCTGTCC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGGTGGGGTCGTCGGGCTaGGAACAGTTGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRVGSSG*EQLPRH
Trigger: GTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCAC...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCCCGCCTCCTCCCTCTaGCAGTGCGAGGAACGGTCC +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDPASSL*QCEERS
Trigger: GGACCGTTCCTCGCACTGTCAGAGGGAGGAGGCGGG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACCCGCCTCCTCCCTCTaGCAGTGCGAGGAACGGTCC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRPASSL*QCEERS
Trigger: GGACCGTTCCTCGCACTGTCAGAGGGAGGAGGCGGG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACCTCGTAGCTCCGCTTaGAACCCAGCGAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREPRSSA*NPARTL
Trigger: GAGGGTCCTCGCTGGGTTTCAAGCGGAGCTACGAGG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCACACCTGGCCCAGATaGGGTCACCGGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRHTWPR*GHRAQS
Trigger: GCTCTGAGCCCGGTGACCTCATCTGGGCCAGGTGTG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAAGCTGCAGCACATTTaGTCCTGCGTTGCCAACGCA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATKLQHI*SCVANA
Trigger: TGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACTCTGGGTCGCGATCTaGGGGCTCCGGGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKLWVAI*GLRDRG
Trigger: CCCTCTGTCCCGGAGCCCGCAGATCGCGACCCAGAG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACGGGCTGAGAACAGTTaGCCAGGCACTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRERAENS*PGTRCG
Trigger: GCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAAGTGTTGGGGAAAGCTaGCACCGTGGGCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRESVGES*HRGHGH
Trigger: GTGGCCGTGCCCACGGTGGCAGCTTTCCCCAACACT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACCGTCCAAGAGCCGTTaGCCGCAAGGGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKPSKSR*PQGRWP
Trigger: GGGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAATGCCGAAGGAGCCCTaGCCCAGCTCTCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREMPKEP*PSSRRR
Trigger: CCTCCTTCGAGAGCTGGGGCAGGGCTCCTTCGGCAT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCGGTGGCGGGGCAGTTaGTCTTGCCCTTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFRWRGS*SCPSRY
Trigger: GTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGACAGGGACCCAGGCATaGGGTGCACAGCAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQTGTQA*GAQQVA
Trigger: AGCAACTTGCTGTGCACCCCATGCCTGGGTCCCTGT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACATCCTCGGAGCTCCTaGGCAGACGTCACCGAGTCG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREHPRSS*ADVTES
Trigger: CGACTCGGTGACGTCTGCCCAGGAGCTCCGAGGATG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTGCCCGCAAGGGAGGTaGCCCGGATTCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFCPQGR*PGFARC
Trigger: ACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGCA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGCGTGGGCTGGCCCTTaGACACCACTCCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRAWAGP*TPLPGG
Trigger: GCCTCCTGGGAGTGGTGTCCAAGGGCCAGCCCACGC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACCATCACCACCAGCGTaGGCTGGCCCTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREPSPPA*AGPWTP
Trigger: TGGTGTCCAAGGGCCAGCCCACGCTGGTGGTGATGG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTTCAGGGGGATTCCATaGAACAGGTGGGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGFRGIP*NRWECL
Trigger: CAAGCATTCCCACCTGTTCCATGGAATCCCCCTGAA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTTTCTCCAGGGCAGGTaGAGAAAGGTGAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGFLQGR*RKVSLQ
Trigger: TTGCAGACTCACCTTTCTCCACCTGCCCTGGAGAAA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGCTGGTGGCTGGTTCTaGACCTTGACTAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGAGGWF*TLTSIR
Trigger: TCTGATACTAGTCAAGGTCCAGAACCAGCCACCAGC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGGCGGTGCAGCCGTGTaGCTTACAGATGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFGGAAV*LTDGRA
Trigger: TGCCCGACCATCTGTAAGTCACACGGCTGCACCGCC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGTGGGGTCGTCGGGCTaGGAACAGTTGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRVGSSG*EQLPRH
Trigger: GTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCAC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGATGCACTTGTTGTTGTaGATGACGTACTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGMHLLL*MTYWWQ
Trigger: CTGCCACCAGTACGTCATTCACAACAACAAGTGCAT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGGAAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACCCCTGGGTGGTTCTGTaGTTTGGGGTCGTTGGACCT +
Preference number: 4 (lower is better)
Translates to: RKLRVTLLVAALTGGSGYPWVVL*FGVVGP
Trigger: AGGTCCAACGACCCCAAATCACAGAACCACCCAGGG...GTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACACTGGGTCCAGGGCTTaGGACCCCGCATCAGCCACC +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDTGSRA*DPASAT
Trigger: GGTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGCATGGTCCTCGCACTaGCGTAGGCTGCCACACTGC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFAWSSH*RRLPHC
Trigger: GCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGGACTGGCTGACTCGTTaGCCGTCTTCACCGCCACGC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRDWLTR*PSSPPR
Trigger: GCGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTC...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAACGTGCATACACACGTaGGCACACGCCGGGACCACA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRETCIHT*AHAGTT
Trigger: TGTGGTCCCGGCGTGTGCTCACGTGTGTATGCACGT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAGCAGACCTGGTACCTaGACCAGACCATCCATAAAA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGSRPGT*TRPSIK
Trigger: TTTTATGGATGGTCTGGTTCAGGTACCAGGTCTGCT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCACACCTGGCCCAGATaGGGTCACCGGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDHTWPR*GHRAQS
Trigger: GCTCTGAGCCCGGTGACCTCATCTGGGCCAGGTGTG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGAAGATTTTCTGAAGTaGCACCCCTCTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGEDFLK*HPSLCT
Trigger: GGTACACAGAGAGGGGTGTCACTTCAGAAAATCTTC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTCACTGTCTTCCGCCTaGCTCTCCCAGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQSLSSA*LSQKTR
Trigger: CCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCACTGTGGAAACCCCTTaGCCTCCAGGTTCACAGTTA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATTVETP*PPGSQL
Trigger: TAACTGTGAACCTGGAGGGCAAGGGGTTTCCACAGT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACTGAGGACCGTCAGATaGTCTCAGGGTGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRELRTVR*SQGGGD
Trigger: GTCCCCTCCACCCTGAGAGCATCTGACGGTCCTCAG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGGAATTTCCCTCACATaGTCCCATCCCACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATGISLT*SHPTWR
Trigger: TCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACATCGCCAAGGGACCTaGGTTTCCGAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREHRQGT*VSEMAW
Trigger: CCAGGCCATCTCGGAAACGCAGGTCCCTTGGCGATG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTCTCCGGGGTACAGGTaGCCCGCGGCGCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHSPGYR*PAAPSS
Trigger: GCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCACCGTCCAACTGTTaGAACCACACGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: VTLLVAALTGGSGYLNAGPPSNC*NHTHPA
Trigger: GGCAGGATGCGTGTGGTTCCAACAGTTGGACGGTGG...CCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGGTGGTTCTGTGATTTaGGGTCGTTGGACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQGGSVI*GRWTSG
Trigger: CCCTGAGGTCCAACGACCCCAAATCACAGAACCACC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGACTCGTGGGCACGCTaGTCGAGGAAGTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREDSWAR*SRKCWG
Trigger: TCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGCTCCTCCGGACTCGTaGGCACGCTGGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYAPPDS*ARWSRK
Trigger: CTTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATCCTCAGGGGTGTCCTaGTTGCAAGCCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRESSGVS*LQACSS
Trigger: CGAGCTGCAGGCTTGCAACCAGGACACCCCTGAGGA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCCATCACCACCAGCGTaGGCTGGCCCTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRPSPPA*AGPWTP
Trigger: TGGTGTCCAAGGGCCAGCCCACGCTGGTGGTGATGG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAAGAGCAGCAAGATTTaGGCCCCACTGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQKSSKI*APLVLP
Trigger: AGGCAGGACCAGTGGGGCCCAAATCTTGCTGCTCTT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTTTCTCCAGGGCAGGTaGAGAAAGGTGAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATFLQGR*RKVSLQ
Trigger: TTGCAGACTCACCTTTCTCCACCTGCCCTGGAGAAA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp CAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTaGCCCCGGCAGCCATCTCTCACCAAAGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: QVGMLALNQSPS*PRQPSLTKGRY
Trigger: GTACCTTCCTTTGGTGAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGGAAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACAAACCAGGTAGTGGGTaGTGTTGCCATTGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RKLRVTLLVAALTGGSGYKPGSG*CCHWGR
Trigger: CCGACCCCAATGGCAACATCACCCACTACCTGGTTT...GTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCGATGCGATAGCCCGTaGAGTGTCGCAAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFRCDSP*SVASRR
Trigger: TCTCCGGCTTGCGACACTTCACGGGCTATCGCATCG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGCATGGTCCTCGCACTaGCGTAGGCTGCCACACTGC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYAWSSH*RRLPHC
Trigger: GCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGACTGGCTGACTCGTTaGCCGTCTTCACCGCCACGC +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDDWLTR*PSSPPR
Trigger: GCGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATAGGAGGCGCACCACGTaGTGGCAGGTGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYRRRTT*WQVKPF
Trigger: GAAGGGCTTCACCTGCCATCACGTGGTGCGCCTCCT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACTCTTCAGGTCTCCGTaGGCCATCAGCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRELFRSP*AISSIT
Trigger: GGTGATGGAGCTGATGGCTCACGGAGACCTGAAGAG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCAGAGAATCAGAGGATaGACACAGGTGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGQRIRG*TQVFLK
Trigger: CTTCAAGAACACCTGTGTTCATCCTCTGATTCTCTG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTTCCATTGCACTCCCTaGAAGTCCACCATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGFHCTP*KSTMFF
Trigger: AAAGAACATGGTGGACTTTCAGGGAGTGCAATGGAA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCGTCCAGGTAGAAGTTaGGGCAGGCCACGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRRPGRS*GRPRTW
Trigger: CCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGGAACCACACGCATCCTaGCCGTCGAACTCCGTCACA +
Preference number: 4 (lower is better)
Translates to: KLRVTLLVAALTGGSGYLEPHAS*PSNSVT
Trigger: TGTGACGGAGTTCGACGGGCAGGATGCGTGTGGTTC...CAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATTCTCAAAAGGCCTGTaGTCCTCCGGACTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREFSKGL*SSGLVG
Trigger: GCCCACGAGTCCGGAGGAGCACAGGCCTTTTGAGAA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCGGGAGACGCAGAGATaGAGCTCCTCATCACCATAT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQRETQR*SSSSPY
Trigger: ATATGGTGATGAGGAGCTGCATCTCTGCGTCTCCCG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCTTCAGGGACTCCGGTaGCATCCACCGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRLQGLR*HPPYRE
Trigger: CTCCCTGTACGGTGGATGGCACCGGAGTCCCTGAAG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAGAGGGCTTGGAGGTTaGCATTATGACTCTATCCCA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATRGLGG*HYDSIP
Trigger: TGGGATAGAGTCATAATGGCAACCTCCAAGCCCTCT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGACGGACTAGCTGACTaGCGGGCGGGCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHDGLAD*RAGTWA
Trigger: AGCCCAGGTGCCCGCCCGCCAGTCAGCTAGTCCGTC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAAGGCCACGCACTTGGTaGGGTCGTCGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRRPRTW*GRRAEN
Trigger: GTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACGTTGGACCTCAGGGGTaGGTCAATGTCTACCACCGT +
Preference number: 4 (lower is better)
Translates to: ITGGSSHGWFWLLECRANVGPQG*VNVYHR
Trigger: ACGGTGGTAGACATTGACCCACCCCTGAGGTCCAAC...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCTGAAGAGGTTTTTCTaGGGACGAAAACCACGTTGT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGLKRFF*GRKPRC
Trigger: ACAACGTGGTTTTCGTCCCCAGAAAAACCTCTTCAG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGGAAAGCTGCCACCGTaGGCACGGCCACCGTCACAT +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYGKLPP*ARPPSH
Trigger: ATGTGACGGTGGCCGTGCCCACGGTGGCAGCTTTCC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGGCACGATCAGACCATTaGGCTCCTTCGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRARSDH*APSAPA
Trigger: GGCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGC...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATCCCAGCGGCCCATCTaGCTGCCTCTTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRESQRPI*LPLSQE
Trigger: TTCCTGAGAAAGAGGCAGCCAGATGGGCCGCTGGGA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAGAGGAAAGCGAAAATaGGAACCCCTGCCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFRGKRK*EPLPAP
Trigger: GGGGGCGGGCAGGGGTTCCCATTTTCGCTTTCCTCT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAGCATCAACTCCGCATaGATACTTTGCACACACATC +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGSINSA*ILCTHI
Trigger: GATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTTCGGAAGTTCTTGGTaGTGTGTAAGGTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRFGSSW*CVRSFS
Trigger: TGAAAAAGACCTTACACACCACCAAGAACTTCCGAA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTTTGAGCAGCTGTGGTaGTTCTTTTTGCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRFEQLW*FFLQRE
Trigger: TTCTCTTTGCAAAAAGAACCACCACAGCTGCTCAAA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGGAAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACAGCGGAGCTGATGACTaGACTCGCCCTTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RKLRVTLLVAALTGGSGYSGADD*TRPLRQ
Trigger: TTGCCTCAAAGGGCGAGTCCAGTCATCAGCTCCGCT...GTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGCCAGCTACAAATACTaGGCGGAGGCCCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKASYKY*AEALAV
Trigger: CACCGCAAGGGCCTCCGCTCAGTATTTGTAGCTGGC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGCAAGTGTCCTTCGATaGCAGAGCAATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQASVLR*QSNSPA
Trigger: AGCTGGAGAATTGCTCTGTCATCGAAGGACACTTGC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACCGGAAGAAGGAAAGTaGCACCAGAGCGTAGGATCG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREPEEGK*HQSVGS
Trigger: CGATCCTACGCTCTGGTGTCACTTTCCTTCTTCCGG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATACTGGGTCCAGGGCTTaGGACCCCGCATCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHTGSRA*DPASAT
Trigger: GGTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGAGATACTCAGGGTTTaGAGAAGCGTAAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQEILRV*RSVKRS
Trigger: GGACCGCTTTACGCTTCTTCAAACCCTGAGTATCTC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGCTCTCGAAGGAGGGTaGTCTTCTCTCGAGACACCT +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREALEGG*SSLETP
Trigger: AGGTGTCTCGAGAGAAGATCACCCTCCTTCGAGAGC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCTCTCGGAGACTGGCTaGCTCGTTGACCGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRLSETG*LVDRLH
Trigger: GTGAAGACGGTCAACGAGTCAGCCAGTCTCCGAGAG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGGACAGTTGTCGGGTTaGTCCAGATACCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREGQLSG*SRYPPS
Trigger: GGATGGAGGGTATCTGGATCAACCCGACAACTGTCC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTTTTGTCTTTTATACTaGAGCTCAGACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRFCLLY*SSDTSK
Trigger: TTTGCTGGTGTCTGAGCTTCAGTATAAAAGACAAAA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTCAACCTGTAAAACTTaGAATTCTCCTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGSTCKT*NSPGTG
Trigger: CCCTGTTCCAGGAGAATTTCAAGTTTTACAGGTTGA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACCTTGGCCACCAATGTaGAGGGAGGGTAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREPWPPM*REGRNL
Trigger: CAGGTTTCTACCCTCCCTTCACATTGGTGGCCAAGG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTTCTTAATCAAGAATTaGGAGGGCTTGGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATFLIKN*EGLEVA
Trigger: GGCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGCAGGTGGAGAAAGGTaGGTCTGCAAGGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRAGGER*VCKGSA
Trigger: GGCACTGCCCTTGCAGACTCACCTTTCTCCACCTGC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACACTGGACTCGCCCTTTaGGGCAATAATCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: ITGGSSHGWFWLLECRANTGLAL*GNNPAR
Trigger: TCGAGCTGGATTATTGCCTCAAAGGGCGAGTCCAGT...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACGTCCAGGTAGAAGTTaGGGCAGGCCACGCACTTGG +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKRPGRS*GRPRTW
Trigger: CCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTACTGGTGGCAGCCCTaGCTCCGCGAGTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFYWWQP*LREFLH
Trigger: ATGCAAGAACTCGCGGAGGCAGGGCTGCCACCAGTA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACAGGGGTGTCCTGGTTaGAAGCCTGCAGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRQGCPG*KPAARC
Trigger: GCATCGAGCTGCAGGCTTGCAACCAGGACACCCCTG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCGCACTGACGTAGGCTaGCACACTGCACCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYRTDVG*HTAPFL
Trigger: GAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTGCG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGGCTCCTTCGGCTCCTaGCACATCAAGTGGACGACG +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKGSFGS*HIKWTT
Trigger: CGTCGTCCACTTGATGTGGCAGGAGCCGAAGGAGCC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGGCTCCTTCGGCTCCTaGCACATCAAGTGGACGACG +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDGSFGS*HIKWTT
Trigger: CGTCGTCCACTTGATGTGGCAGGAGCCGAAGGAGCC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACGCCACGCGGGTCTCTaGCTCACCCTTGATGATGTC +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKRHAGL*LTLDDV
Trigger: GACATCATCAAGGGTGAGGCAGAGACCCGCGTGGCG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACGCCACGCGGGTCTCTaGCTCACCCTTGATGATGTC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRRHAGL*LTLDDV
Trigger: GACATCATCAAGGGTGAGGCAGAGACCCGCGTGGCG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGATTTGTAAAAACAGGTaGTTTCTTTCCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRICKNR*FLSICW
Trigger: CCAGCAGATGGAAAGAAAGCACCTGTTTTTACAAAT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCAAAGAGGCCACTTGTaGCTGACTCCCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFQRGHL*LTPSPS
Trigger: GGAAGGGGAGGGAGTCAGGCACAAGTGGCCTCTTTG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAATCAAAGCCCGTCTTTaGCCCGGCAGCCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREIKARL*PGSHLS
Trigger: TGAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGAT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGGGCCCCACTGGTCCTaGCTAGACTCTCACATGGGT +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYGPHWS*LDSHMG
Trigger: ACCCATGTGAGAGTCTAGGCAGGACCAGTGGGGCCC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAACCCAATAGCTGTTTaGTCTTTTCACTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGNPIAV*SFHCGS
Trigger: ACTGCCACAGTGAAAAGAGCAAACAGCTATTGGGTT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTCTCCGGGGTACAGGTaGCCCGCGGCGCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHSPGYR*PAAPSS
Trigger: GCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGAGTTCTTGCATTTGTaGTGCAGGTCCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQEFLHL*CRSWQK
Trigger: CTTCTGCCAGGACCTGCACCACAAATGCAAGAACTC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCACAGGGACCCAGGCATaGGGTGCACAGCAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFTGTQA*GAQQVA
Trigger: AGCAACTTGCTGTGCACCCCATGCCTGGGTCCCTGT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGGAAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTGGTGGTTCTGTGATTTaGGGTCGTTGGACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KRKLRVTLLVAALTGGSGGGSVI*GRWTSG
Trigger: CCCTGAGGTCCAACGACCCCAAATCACAGAACCACC...ACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAATCAGCCACCCTGGGTaGTTCTGTGATTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREISHPG*FCDLGS
Trigger: CGACCCCAAATCACAGAACCACCCAGGGTGGCTGAT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGGAAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTATCAGCCACCCTGGGTaGTTCTGTGATTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: KRKLRVTLLVAALTGGSGISHPG*FCDLGS
Trigger: CGACCCCAAATCACAGAACCACCCAGGGTGGCTGAT...ACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp GTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGACAAAGATGGCATACTaGGTCCAGGGCTTGAGACCC +
Preference number: 4 (lower is better)
Translates to: VTLLVAALTGGSGYLNAGTKMAY*VQGLRP
Trigger: GGGTCTCAAGCCCTGGACCCAGTATGCCATCTTTGT...CCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGGGGCACAGAGGGGTTaGTGGCATCTGTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNGAQRG*WHLSGH
Trigger: ATGTCCAGACAGATGCCACCAACCCCTCTGTGCCCC...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTGGTCGAGGAAGTGTTaGGGAAAGCTGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFWSRKC*GKLPPW
Trigger: CCACGGTGGCAGCTTTCCCCAACACTTCCTCGACCA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGCACGATCAGACCATTaGGCTCCTTCGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDARSDH*APSAPA
Trigger: GGCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTCACGTAGAAATAGGTaGGTTCCGTCCAAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQSRRNR*VPSKSR
Trigger: ACGGCTCTTGGACGGAACCCACCTATTTCTACGTGA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGATAGCAATAGACAATTaGGATTCATGTCTACCTGTG +
Preference number: 4 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRIAIDN*DSCLPV
Trigger: CACAGGTAGACATGAATCCCAATTGTCTATTGCTAT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGATTCTTACTGGTCCCTaGCATTCGAATCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGILTGP*HSNQLI
Trigger: TATCAGCTGATTCGAATGCCAGGGACCAGTAAGAAT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCCTCAAAATTCTTACTaGTCCCTGGCATTCGAATCA +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGPQNSY*SLAFES
Trigger: TGATTCGAATGCCAGGGACCAGTAAGAATTTTGAGG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAATAAGCACATTTCTTaGTGGACTACCTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATNKHIS*WTTCPA
Trigger: AGCAGGGCAGGTAGTCCACCAAGAAATGTGCTTATT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACTCTCACGGGTGGTTCTaGTTACTTGAATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ITGGSSHGWFWLLECRANSHGWF*LLECRA
Trigger: GGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGA...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACGGCAGCTCTCACGGGTaGTTCTGGTTACTTGAATGC +
Preference number: 4 (lower is better)
Translates to: ITGGSSHGWFWLLECRANGSSHG*FWLLEC
Trigger: GCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCC...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
3UTR CAA 72 bp GTTTCTGAGTTGTTTTCTGCAAAAGCTGCAGCACATTaGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSELFSAKAAAH*ILRCQRTGPRP
Trigger: TGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTTGCAGAAAACAACTCAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGTTAAAGAACAGTCGTaGTCCCCGGATGACCGTGAG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREVKEQS*SPDDRE
Trigger: CTCACGGTCATCCGGGGATCACGACTGTTCTTTAAC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGCGCCCCTTGGTTCCTaGAACTTCTTCCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREAPLGS*NFFHLV
Trigger: CACAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACCCTGGGTGGTTCTGTaGTTTGGGGTCGTTGGACCT +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRPWVVL*FGVVGP
Trigger: AGGTCCAACGACCCCAAATCACAGAACCACCCAGGG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACTCGGCACCAGTGCCTaGAGAGGTTTTTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKLGTSA*RGFSGD
Trigger: GTCCCCAGAAAAACCTCTTCAGGCACTGGTGCCGAG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACTCTCGGAGACTGGCTaGCTCGTTGACCGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRLSETG*LVDRLH
Trigger: GTGAAGACGGTCAACGAGTCAGCCAGTCTCCGAGAG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAGGAGGCGCACCACGTaGTGGCAGGTGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHRRRTT*WQVKPF
Trigger: GAAGGGCTTCACCTGCCATCACGTGGTGCGCCTCCT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGTTCTGCCAAGCTGGTaGTTTCCCAAAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFVLPSW*FPKGPR
Trigger: GCGTGGTCCTTTGGGAAATCACCAGCTTGGCAGAAC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCCTCGTAGCTCCGCTTaGAACCCAGCGAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHPRSSA*NPARTL
Trigger: GAGGGTCCTCGCTGGGTTTCAAGCGGAGCTACGAGG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCCGGGAGTTCAGTACTaGGGACCGTCAGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYPGVQY*GPSDAL
Trigger: GAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTGGAGGTTGCCATTATaGCTCTATCCCATTCTTAAG +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATWRLPL*LYPILK
Trigger: CTTAAGAATGGGATAGAGTCATAATGGCAACCTCCA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTGTTCCGGATATCCATaGCGGGACACACCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDCSGYP*RDTPLR
Trigger: CCGGAGAGGTGTGTCCCGGCATGGATATCCGGAACA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATACTGGTGGCAGCCCTaGCTCCGCGAGTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKYWWQP*LREFLH
Trigger: ATGCAAGAACTCGCGGAGGCAGGGCTGCCACCAGTA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGAACCACACGCATCCTaGCCGTCGAACTCCGTCACA +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYEPHAS*PSNSVT
Trigger: TGTGACGGAGTTCGACGGGCAGGATGCGTGTGGTTC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATTCACTGTCTTCCGCCTaGCTCTCCCAGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNSLSSA*LSQKTR
Trigger: CCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAGTGTTGGGGAAAGCTaGCACCGTGGGCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHSVGES*HRGHGH
Trigger: GTGGCCGTGCCCACGGTGGCAGCTTTCCCCAACACT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATATGCCGAAGGAGCCCTaGCCCAGCTCTCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHMPKEP*PSSRRR
Trigger: CCTCCTTCGAGAGCTGGGGCAGGGCTCCTTCGGCAT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGGCTGCCAGGTCCCGATaGACAAACTTCTTGGCGTTC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRAARSR*TNFLAF
Trigger: GAACGCCAAGAAGTTTGTGCATCGGGACCTGGCAGC...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACATGCAGTTTCTCGCTaGCAGGTCCCGATGCACAAA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREHAVSR*QVPMHK
Trigger: TTTGTGCATCGGGACCTGGCAGCGAGAAACTGCATG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCAAAGAGGCCACTTGTaGCTGACTCCCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDQRGHL*LTPSPS
Trigger: GGAAGGGGAGGGAGTCAGGCACAAGTGGCCTCTTTG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACATTTGATCCTGCGTTaGCAACGCACAGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRHLILR*QRTGPR
Trigger: CCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTCGCCTTCTAGGAGGTaGCACACCTTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYSPSRR*HTLGQG
Trigger: TCCCTGTCCCAAGGTGTGCCACCTCCTAGAAGGCGA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAATGTCGTTTCTCTCCTaGCGCCCCTTGGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREMSFLS*RPLVPE
Trigger: TTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACAT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGATCAGCCACCCTGGGTaGTTCTGTGATTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRISHPG*FCDLGS
Trigger: CGACCCCAAATCACAGAACCACCCAGGGTGGCTGAT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAACAAAGATGGCATACTaGGTCCAGGGCTTGAGACCC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRETKMAY*VQGLRP
Trigger: GGGTCTCAAGCCCTGGACCCAGTATGCCATCTTTGT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGGGGCACAGAGGGGTTaGTGGCATCTGTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDGAQRG*WHLSGH
Trigger: ATGTCCAGACAGATGCCACCAACCCCTCTGTGCCCC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTCAGACTCGAATGGTaGAGACCAGGTCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFFRLEW*RPGPRG
Trigger: CCCTCGAGGACCTGGTCTCCACCATTCGAGTCTGAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCACGTACACAGAGCATaGAAACACATCACTGGCACT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQHVHRA*KHITGT
Trigger: AGTGCCAGTGATGTGTTTCCATGCTCTGTGTACGTG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCAGATGCTCTCAGGGTaGAGGGGACCAAGACGTACT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFQMLSG*RGPRRT
Trigger: AGTACGTCTTGGTCCCCTCCACCCTGAGAGCATCTG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCAGATGCTCTCAGGGTaGAGGGGACCAAGACGTACT +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRQMLSG*RGPRRT
Trigger: AGTACGTCTTGGTCCCCTCCACCCTGAGAGCATCTG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCCATTCGGAAGTTCTTaGTGGTGTGTAAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATPFGSS*WCVRSF
Trigger: AAAAGACCTTACACACCACCAAGAACTTCCGAATGG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAGATTTGGGCCCCACTaGTCCTGCCTAGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFRFGPH*SCLDSH
Trigger: GTGAGAGTCTAGGCAGGACCAGTGGGGCCCAAATCT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACCGGAAGAAGGAAAGTaGCACCAGAGCGTAGGATCG +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRPEEGK*HQSVGS
Trigger: CGATCCTACGCTCTGGTGTCACTTTCCTTCTTCCGG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGCGCCCCTTGGTTCCTaGAACTTCTTCCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFAPLGS*NFFHLV
Trigger: CACAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACGTTCATCCGAAAAGGTaGCCAGGGTCTTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: ITGGSSHGWFWLLECRANVHPKR*PGSSQR
Trigger: TCTTTGTGAAGACCCTGGTCACCTTTTCGGATGAAC...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR TCA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACCTGTCTGGACATAAATaGTGTCACTCTTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: ITGGSSHGWFWLLECRANLSGHK*CHSWPH
Trigger: ATGGGGCCAAGAGTGACATCATTTATGTCCAGACAG...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAAGCTCCTTCAGGATCTaGGAGTCTGTCTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRESSFRI*ESVFGQ
Trigger: CTGTCCAAAGACAGACTCTCAGATCCTGAAGGAGCT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGTTCTGCCAAGCTGGTaGTTTCCCAAAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYVLPSW*FPKGPR
Trigger: GCGTGGTCCTTTGGGAAATCACCAGCTTGGCAGAAC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCTTGTACCCAATCACTaGGGCTCCTCAGCAATATTT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQLVPNH*GSSAIF
Trigger: AAATATTGCTGAGGAGCCTCAGTGATTGGGTACAAG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCCAATAATATCAGCTTaGGGTCAGTCAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQPIISA*GQSNPN
Trigger: GTTGGGGTTTGACTGACCTCAAGCTGATATTATTGG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAACCTGAACATTTTCTaGTGCGTATTTGACATCACT +
Preference number: 4 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGNLNIF*CVFDIT
Trigger: AGTGATGTCAAATACGCATCAGAAAATGTTCAGGTT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAACATCAAGAGTATCTaGAAGTGTCCTTCGATGACA +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATNIKSI*KCPSMT
Trigger: TGTCATCGAAGGACACTTGCAGATACTCTTGATGTT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCGGGGCAGTTGGTCTTaGCCTTCGCGGTACCCGGAC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHRGSWS*PSRYPD
Trigger: GTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACATCGTTCGACAAACTaGCCGTTGATGACGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKHRSTN*PLMTVA
Trigger: CGCCACCGTCATCAACGGGCAGTTTGTCGAACGATG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAGGTCTCCACACACCTaGCGTCCAGGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKRSPHT*RPGRSC
Trigger: GCAACTTCTACCTGGACGGCAGGTGTGTGGAGACCT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGCCTCCGCGAGTTCTTaGATTTGTGGTGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDASASS*ICGAGP
Trigger: AGGACCTGCACCACAAATGCAAGAACTCGCGGAGGC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCATGCAGTTTCTCGCTaGCAGGTCCCGATGCACAAA +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRHAVSR*QVPMHK
Trigger: TTTGTGCATCGGGACCTGGCAGCGAGAAACTGCATG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCTGAGGACCGTCAGATaGTCTCAGGGTGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHLRTVR*SQGGGD
Trigger: GTCCCCTCCACCCTGAGAGCATCTGACGGTCCTCAG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAAGGAAGGTACACCTTaGTGGGTTACCCCATATATC +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQKEGTP*WVTPYI
Trigger: GATATATGGGGTAACCCAGCAAGGTGTACCTTCCTT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATATCAAAGCCCGTCTTTaGCCCGGCAGCCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYIKARL*PGSHLS
Trigger: TGAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGAT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGGGCCCCACTGGTCCTaGCTAGACTCTCACATGGGT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHGPHWS*LDSHMG
Trigger: ACCCATGTGAGAGTCTAGGCAGGACCAGTGGGGCCC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGTTTTCTGCAAAAGCTaGAGCACATTTGATCCTGCG +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQVFCKS*STFDPA
Trigger: CGCAGGATCAAATGTGCTGCAGCTTTTGCAGAAAAC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGATGCCTGGTCCCCATTaGTCTTCAGGGCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRMPGPH*SSGQCR
Trigger: ACGACATTGCCCTGAAGACCAATGGGGACCAGGCAT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATTTTCACAGGATGCCTaGTCCCCATTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREFSQDA*SPLVFR
Trigger: CCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGTTGGACCTCAGGGGTaGGTCAATGTCTACCACCGT +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRVGPQG*VNVYHR
Trigger: ACGGTGGTAGACATTGACCCACCCCTGAGGTCCAAC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGGGTCTTCACAAAGATaGCATACTGGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNGSSQR*HTGSRA
Trigger: AGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCC...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAAAGAGAAGAAACGGTaGATTCACGCCCATTCGGAA +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQKEKKR*IHAHSE
Trigger: TTCCGAATGGGCGTGAATCCACCGTTTCTTCTCTTT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp CCCCGGCAGCCATCTCTCACCAAAGGAAGGTACACCTaGCTGGGTTACCCCATATATCAGATACATCATGAC +
Preference number: 4 (lower is better)
Translates to: PRQPSLTKGRYT*LGYPIYQIHHD
Trigger: GTCATGATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCTGCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACTTCGGGCCTCGTTTTaGACATCAAGAGTATCTGCA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRELRASF*TSRVSA
Trigger: TGCAGATACTCTTGATGTTCAAAACGAGGCCCGAAG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAGAGGCCGAGTTCCTTaGGGTGAACCATCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKRGRVP*GEPSRR
Trigger: TCTTCGAGATGGTTCACCTCAAGGAACTCGGCCTCT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCAGCTCCTTCAGGATCTaGGAGTCTGTCTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFSSFRI*ESVFGQ
Trigger: CTGTCCAAAGACAGACTCTCAGATCCTGAAGGAGCT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATAAGCTGCAGCACATTTaGTCCTGCGTTGCCAACGCA +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYKLQHI*SCVANA
Trigger: TGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGTGGTTCTGGTTACTTaGATGCAGGGCCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNVVLVT*MQGQQL
Trigger: AAGCTGTTGGCCCTGCATTCAAGTAACCAGAACCAC...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR TCA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATAAAGGAAGCTTCGAGTaGCATTACTGGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNKGSFE*HYWWQL
Trigger: GAGCTGCCACCAGTAATGTCACTCGAAGCTTCCTTT...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGAACCACACGCATCCTaGCCGTCGAACTCCGTCACA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHEPHAS*PSNSVT
Trigger: TGTGACGGAGTTCGACGGGCAGGATGCGTGTGGTTC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTTCTCAAAAGGCCTGTaGTCCTCCGGACTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHFSKGL*SSGLVG
Trigger: GCCCACGAGTCCGGAGGAGCACAGGCCTTTTGAGAA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCGTTCCAGAGCGAAGTaGTTGCGGGAGACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHRSRAK*LRETQR
Trigger: TCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATTGGTAAGGCTGTTCTaGCAAGCTGGTGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRELVRLF*QAGDFP
Trigger: TGGGAAATCACCAGCTTGGCAGAACAGCCTTACCAA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTCCGCCCGTTTTTCTTaGCTCCGTTCATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFSARFS*LRSCVC
Trigger: ACACACACATGAACGGAGGCAAGAAAAACGGGCGGA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTCCGCATGGATACTTTaGACACACATCAGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFSAWIL*THISRV
Trigger: GACACGGCTGATGTGTGTGCAAAGTATCCATGCGGA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCCCAGGGCACCTTTGTaGTCACTTCAGGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHPRAPL*SLQGDS
Trigger: GGAATCCCCCTGAAGTGAGCACAAAGGTGCCCTGGG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGATGTCAAAGGAGGTTTaGAACCCAATAGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQMSKEV*NPIAVC
Trigger: GCAAACAGCTATTGGGTTGCAAACCTCCTTTGACAT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGAATATGTGCATGGGTaGACACTTATTTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQEYVHG*TLILRL
Trigger: GAGCCTCAAAATAAGTGTGCACCCATGCACATATTC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTGTGGTGCAGGTCCTaGCAGAAGCTGAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFLWCRS*QKLKFT
Trigger: TGTGAACTTCAGCTTCTGCCAGGACCTGCACCACAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACACGTCACCGAGTCGATaGTCTTCTCGCCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDTSPSR*SSRLLG
Trigger: TCCTAGAAGGCGAGAAGACCATCGACTCGGTGACGT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATATGTCGTTTCTCTCCTaGCGCCCCTTGGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYMSFLS*RPLVPE
Trigger: TTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACAT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCCACCGTCCAACTGTTaGAACCACACGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHPPSNC*NHTHPA
Trigger: GGCAGGATGCGTGTGGTTCCAACAGTTGGACGGTGG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAACAAAGATGGCATACTaGGTCCAGGGCTTGAGACCC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRTKMAY*VQGLRP
Trigger: GGGTCTCAAGCCCTGGACCCAGTATGCCATCTTTGT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCACAGAGGGGTTGGTaGCATCTGTCTGGACATAAA +
Preference number: 4 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNAQRGW*HLSGHK
Trigger: TTTATGTCCAGACAGATGCCACCAACCCCTCTGTGC...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCACTTCAGAATAATCTaGGATGATGAGTTAGACACT +
Preference number: 4 (lower is better)
Translates to: KSCSTFDPALPTHRAEATHFRII*DDELDT
Trigger: AGTGTCTAACTCATCATCCCAGATTATTCTGAAGTG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGATTGGGGTCGGAGGGTaGTTTCCACTTCAGAATAAT +
Preference number: 4 (lower is better)
Translates to: VTLLVAALTGGSGYLNAGIGVGG*FPLQNN
Trigger: ATTATTCTGAAGTGGAAACCACCCTCCGACCCCAAT...CCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTGGTCGAGGAAGTGTTaGGGAAAGCTGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHWSRKC*GKLPPW
Trigger: CCACGGTGGCAGCTTTCCCCAACACTTCCTCGACCA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACAATGTCATCAGCCTTaGCTTCAGGCATGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRQCHQP*LQAWSS
Trigger: CGAGGACCATGCCTGAAGCCAAGGCTGATGACATTG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCATTATTCTCAGCCTCTaGCCGCAGAGAACGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFIILSL*PQRTEV
Trigger: TACCTCCGTTCTCTGCGGCCAGAGGCTGAGAATAAT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAACTTGAAATTCTCCTaGAACAGGGCTGGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQNLKFS*NRAGCF
Trigger: AAAACACCCAGCCCTGTTCCAGGAGAATTTCAAGTT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAACCTTCCAGCAGACCTaGTACCTGAACCAGACCATC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRTFQQT*YLNQTI
Trigger: GATGGTCTGGTTCAGGTACCAGGTCTGCTGGAAGGT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACAGGTTGTTGTGCTTTaGGATCTGACGTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREQVVVL*DLTFLG
Trigger: ACCCAAGAACGTCAGATCCCAAAGCACAACAACCTG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTCAGGGGGATTCCATaGAACAGGTGGGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFFRGIP*NRWECL
Trigger: CAAGCATTCCCACCTGTTCCATGGAATCCCCCTGAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGCAAGTGTCCTTCGATaGCAGAGCAATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRASVLR*QSNSPA
Trigger: AGCTGGAGAATTGCTCTGTCATCGAAGGACACTTGC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCTTTGTAGAACAGCATaGACCCCAAGAGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYLCRTA*TPRGLG
Trigger: TCCGAGACCTCTTGGGGTTCATGCTGTTCTACAAAG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCTGTCTGGACATAAATaGTGTCACTCTTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFLSGHK*CHSWPH
Trigger: ATGGGGCCAAGAGTGACATCATTTATGTCCAGACAG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAAACCAGGTAGTGGGTaGTGTTGCCATTGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHKPGSG*CCHWGR
Trigger: CCGACCCCAATGGCAACATCACCCACTACCTGGTTT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACTCTGGTTGTGCTTCTaGGAATCTTCAGACTCGAAT +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRELWLCF*ESSDSN
Trigger: ATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCACACATCACTGGCACTaGGATACTCAGGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFTHHWH*DTQGLK
Trigger: CTTCAAACCCTGAGTATCTCAGTGCCAGTGATGTGT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCTGAGGCTAGACTTCTaGCACAAGAAGAATCTGTCG +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRLRLDF*HKKNLS
Trigger: CGACAGATTCTTCTTGTGTCAGAAGTCTAGCCTCAG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGTTCACTGTGTTCTTTaGGCAGCTGTGGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFVHCVL*AAVVVL
Trigger: AAGAACCACCACAGCTGCTCAAAGAACACAGTGAAC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATTCTTAATCAAGAATTaGGAGGGCTTGGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREFLIKN*EGLEVA
Trigger: GGCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACCTGCTAGGATACAGTaGAAGATCTGTCTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREPARIQ*KICLSV
Trigger: AACTGACAGACAGATCTTTCACTGTATCCTAGCAGG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCATCCATTTACCGGATaGCCAGCGCAAGTCATATGC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYHPFTG*PAQVIC
Trigger: GCATATGACTTGCGCTGGTCATCCGGTAAATGGATG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAACATCAAGAGTATCTaGAAGTGTCCTTCGATGACA +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQNIKSI*KCPSMT
Trigger: TGTCATCGAAGGACACTTGCAGATACTCTTGATGTT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGACCCAGGCATGGGGTaGACAGCAAGTTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHDPGMG*TASCWN
Trigger: ATTCCAGCAACTTGCTGTGCACCCCATGCCTGGGTC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTCACTGTCTTCCGCCTaGCTCTCCCAGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHSLSSA*LSQKTR
Trigger: CCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCGCACTGACGTAGGCTaGCACACTGCACCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHRTDVG*HTAPFL
Trigger: GAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTGCG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCAGGGAGCAGACCCTTaGCCCCTTTCCGGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHQGADP*PLSGSN
Trigger: ATTACTACCGGAAAGGGGGCAAGGGTCTGCTCCCTG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATCCGCCCGTTTTTCTTaGCTCCGTTCATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKSARFS*LRSCVC
Trigger: ACACACACATGAACGGAGGCAAGAAAAACGGGCGGA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAACAGGTGGGAATGCTTaGTCTGAATCAAAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRTGGNA*SESKPV
Trigger: GACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGGAATTTCCCTCACATaGTCCCATCCCACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRGISLT*SHPTWR
Trigger: TCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGTTTTCTGCAAAAGCTaGAGCACATTTGATCCTGCG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREVFCKS*STFDPA
Trigger: CGCAGGATCAAATGTGCTGCAGCTTTTGCAGAAAAC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGTTCTGGTTACTTGAATaGAGGGCCAACAGCTTACAG +
Preference number: 4 (lower is better)
Translates to: KLRVTLLVAALTGGSGYLFWLLE*RANSLQ
Trigger: CTGTAAGCTGTTGGCCCTGCATTCAAGTAACCAGAA...CAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCGTGTGACTTACAGATaGTCGGGCAAACTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYRVTYR*SGKLSG
Trigger: GCCAGAAAGTTTGCCCGACCATCTGTAAGTCACACG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATTGTGGTGCAGGTCCTaGCAGAAGCTGAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRLWCRS*QKLKFT
Trigger: TGTGAACTTCAGCTTCTGCCAGGACCTGCACCACAA...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGAGTTCTTGCATTTGTaGTGCAGGTCCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKEFLHL*CRSWQK
Trigger: CTTCTGCCAGGACCTGCACCACAAATGCAAGAACTC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTGCACAGCAAGTTGCTaGAATTCATCGTGTACCCGG +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYCTASC*NSSCTR
Trigger: CCGGGTACACGATGAATTCCAGCAACTTGCTGTGCA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGCACAGAGGGGTTGGTaGCATCTGTCTGGACATAAA +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKAQRGW*HLSGHK
Trigger: TTTATGTCCAGACAGATGCCACCAACCCCTCTGTGC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACATCTTCAGACTCGAATaGTGGAGACCAGGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDIFRLE*WRPGPR
Trigger: TCGAGGACCTGGTCTCCACCATTCGAGTCTGAAGAT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTCCTGCCACATCAAGTaGACGACGTTGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRSCHIK*TTLFSK
Trigger: CTTTGAGAACAACGTCGTCCACTTGATGTGGCAGGA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACATTATTCTCAGCCTCTaGCCGCAGAGAACGGAGGTA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDIILSL*PQRTEV
Trigger: TACCTCCGTTCTCTGCGGCCAGAGGCTGAGAATAAT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGTCAGTGACTCTCTCTaGACAGTTGTCGGGTTGATC +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDVSDSL*TVVGLI
Trigger: GATCAACCCGACAACTGTCCAGAGAGAGTCACTGAC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTTCGGAAGTTCTTGGTaGTGTGTAAGGTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQFGSSW*CVRSFS
Trigger: TGAAAAAGACCTTACACACCACCAAGAACTTCCGAA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATAAGCACATTTCTTGGTaGACTACCTGCCCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYKHISW*TTCPAR
Trigger: CCTAGCAGGGCAGGTAGTCCACCAAGAAATGTGCTT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGGGCGTCTTCTGTACATaGTGCTACTTGGCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRGVFCT*CYLALV
Trigger: TACAAGAGCCAAGTAGCACCATGTACAGAAGACGCC...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp AGCCAATTCCCAAAGCATCAACTCCGCATGGATACTTaGCACACACATCAGCCGTGTCTAATGGACACACAC +
Preference number: 4 (lower is better)
Translates to: SQFPKHQLRMDT*HTHQPCLMDTH
Trigger: GTGTGTGTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTTTGGGAATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp ATCGGCATTCCCTGTTCCCCATCCTCAACAAAACCATaGTTTCTGAAGAGCCTAAGGTGTCAAGGACTCACC +
Preference number: 4 (lower is better)
Translates to: IGIPCSPSSTKP*FLKSLRCQGLT
Trigger: GGTGAGTCCTTGACACCTTAGGCTCTTCAGAAACAATGGTTTTGTTGAGGATGGGGAACAGGGAATGCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGGACAGAACCCCGGGTaGTGTTCATCAGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHGQNPG*CSSGCR
Trigger: TCTACAACCTGATGAACATCACCCGGGGTTCTGTCC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATATGCACTTGTTGTTGTaGATGACGTACTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYMHLLL*MTYWWQ
Trigger: CTGCCACCAGTACGTCATTCACAACAACAAGTGCAT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGTTCATCCGAAAAGGTaGCCAGGGTCTTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRVHPKR*PGSSQR
Trigger: TCTTTGTGAAGACCCTGGTCACCTTTTCGGATGAAC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCTGTCTGGACATAAATaGTGTCACTCTTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDLSGHK*CHSWPH
Trigger: ATGGGGCCAAGAGTGACATCATTTATGTCCAGACAG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGTCGCAAGCCGGAGATaGCCAGCGACTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHVASRR*PATPCS
Trigger: TGAACAAGGAGTCGCTGGTCATCTCCGGCTTGCGAC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATACACATCACTGGCACTaGGATACTCAGGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYTHHWH*DTQGLK
Trigger: CTTCAAACCCTGAGTATCTCAGTGCCAGTGATGTGT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCTCTTCAGGTCTCCGTaGGCCATCAGCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHLFRSP*AISSIT
Trigger: GGTGATGGAGCTGATGGCTCACGGAGACCTGAAGAG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATATAGGAACGATCTCTaGACTCCATTGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREYRNDL*TPLDMV
Trigger: TACCATGTCCAATGGAGTTCAGAGATCGTTCCTATA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATCAACCTGTAAAACTTaGAATTCTCCTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRESTCKT*NSPGTG
Trigger: CCCTGTTCCAGGAGAATTTCAAGTTTTACAGGTTGA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACTGAGGCTAGACTTCTaGCACAAGAAGAATCTGTCG +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRLRLDF*HKKNLS
Trigger: CGACAGATTCTTCTTGTGTCAGAAGTCTAGCCTCAG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAGCAGACCTGGTACCTaGACCAGACCATCCATAAAA +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKSRPGT*TRPSIK
Trigger: TTTTATGGATGGTCTGGTTCAGGTACCAGGTCTGCT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATTGTGCTTTGGGATCTaGCGTTCTTGGGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKLCFGI*RSWVCT
Trigger: TGTGCAAACCCAAGAACGTCAGATCCCAAAGCACAA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGTTCACTGTGTTCTTTaGGCAGCTGTGGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKVHCVL*AAVVVL
Trigger: AAGAACCACCACAGCTGCTCAAAGAACACAGTGAAC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGATACACACGTTCCCTaGTTCAGACCGGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHDTHVP*FRPVPG
Trigger: ACCTGGAACCGGTCTGAATCAGGGAACGTGTGTATC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGGCATTCGAATCAGCTaGTACACACGTTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKGIRIS*YTRSLI
Trigger: AATCAGGGAACGTGTGTATCAGCTGATTCGAATGCC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGAACCTGAACATTTTCTaGTGCGTATTTGACATCACT +
Preference number: 4 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQNLNIF*CVFDIT
Trigger: AGTGATGTCAAATACGCATCAGAAAATGTTCAGGTT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCCCAGGGTCACAGGATaGCCTATGCAGACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHPRVTG*PMQTLV
Trigger: CACAAGGGTCTGCATAGGTCATCCTGTGACCCTGGG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTGTGAAGGAGAGAAATaGTTAGCACTGGGACTACAG +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRCEGEK*LALGLQ
Trigger: CTGTAGTCCCAGTGCTAATCATTTCTCTCCTTCACA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCAATTCTCCAGCTCATaGAACCTAGTGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRQFSSS*NLVRLF
Trigger: GAACAACCTCACTAGGTTGCATGAGCTGGAGAATTG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCGGGAGACGCAGAGATaGAGCTCCTCATCACCATAT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHRETQR*SSSSPY
Trigger: ATATGGTGATGAGGAGCTGCATCTCTGCGTCTCCCG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAATCATGGGCGACCATaGAGTTTCTCGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHNHGRP*SFSLPG
Trigger: ACCTGGCAGCGAGAAACTGCATGGTCGCCCATGATT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTCACTCCAAATGAAATaGTCCTCCCTTGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDSLQMK*SSLGHQ
Trigger: TTGGTGGCCAAGGGAGGAGCATTTCATTTGGAGTGA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGAAGACGTACTCTCAGTaGACCTCTCTCTTACATTGC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRKTYSQ*TSLLHC
Trigger: GCAATGTAAGAGAGAGGTGCACTGAGAGTACGTCTT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACAGAGGGCTTGGAGGTTaGCATTATGACTCTATCCCA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDRGLGG*HYDSIP
Trigger: TGGGATAGAGTCATAATGGCAACCTCCAAGCCCTCT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACAGTCTGCAAGGGCAGTaGCTAAAAGTACAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDSLQGQ*LKVQEQ
Trigger: CTGCTCTTGTACTTTTAGGCACTGCCCTTGCAGACT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCTGGTGAATCCCATTTaGAAGGGGCAGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHLVNPI*KGQAQH
Trigger: GTGCTGGGCCTGCCCCTTGCAAATGGGATTCACCAG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGGGTCTTCACAAAGATaGCATACTGGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHGSSQR*HTGSRA
Trigger: AGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGGGGCACAGAGGGGTTaGTGGCATCTGTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHGAQRG*WHLSGH
Trigger: ATGTCCAGACAGATGCCACCAACCCCTCTGTGCCCC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCTGAGAGTCTGTCTTTaGACAGGAGCAGCATTCGCC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHLRVCL*TGAAFA
Trigger: GGCGAATGCTGCTCCTGTCCAAAGACAGACTCTCAG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCAATGTCATCAGCCTTaGCTTCAGGCATGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHQCHQP*LQAWSS
Trigger: CGAGGACCATGCCTGAAGCCAAGGCTGATGACATTG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTCCTGCCACATCAAGTaGACGACGTTGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDSCHIK*TTLFSK
Trigger: CTTTGAGAACAACGTCGTCCACTTGATGTGGCAGGA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACACTGTTAGGAAGGATTaGACCGAGGCAAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDTVRKD*TEARSE
Trigger: TTCTGACCTTGCCTCGGTCCAATCCTTCCTAACAGT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAACTGTTAGGAAGGATTaGACCGAGGCAAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRTVRKD*TEARSE
Trigger: TTCTGACCTTGCCTCGGTCCAATCCTTCCTAACAGT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGGCGTCTTCTGTACATaGTGCTACTTGGCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDGVFCT*CYLALV
Trigger: TACAAGAGCCAAGTAGCACCATGTACAGAAGACGCC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCCTGCGTTTCCGAGATaGCCTGGGGACGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHPAFPR*PGDENH
Trigger: GTGGTTTTCGTCCCCAGGCCATCTCGGAAACGCAGG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCTGAAATTTCTTCAATaGGGCCGAGGTTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDLKFLQ*GRGWLL
Trigger: TAGAAGCCAACCTCGGCCTCATTGAAGAAATTTCAG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAAACCAGGTAGTGGGTaGTGTTGCCATTGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHKPGSG*CCHWGR
Trigger: CCGACCCCAATGGCAACATCACCCACTACCTGGTTT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCTCTGGTTGTGCTTCTaGGAATCTTCAGACTCGAAT +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDLWLCF*ESSDSN
Trigger: ATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGGACAGTTGTCGGGTTaGTCCAGATACCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHGQLSG*SRYPPS
Trigger: GGATGGAGGGTATCTGGATCAACCCGACAACTGTCC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTATAGGAACGATCTCTaGACTCCATTGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRYRNDL*TPLDMV
Trigger: TACCATGTCCAATGGAGTTCAGAGATCGTTCCTATA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCCCTTATCCAAAATATaGAAGCAGCAGCTATTGGTC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRPLSKI*KQQLLV
Trigger: GACCAATAGCTGCTGCTTTCATATTTTGGATAAGGG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACTTGTACCCAATCACTaGGGCTCCTCAGCAATATTT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKLVPNH*GSSAIF
Trigger: AAATATTGCTGAGGAGCCTCAGTGATTGGGTACAAG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGATGCAGAGAGAAAGTaGTGTGCTTGGTATTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKDAERK*CAWYSP
Trigger: AGGAGAATACCAAGCACATCACTTTCTCTCTGCATC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCATCCATTTACCGGATaGCCAGCGCAAGTCATATGC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHHPFTG*PAQVIC
Trigger: GCATATGACTTGCGCTGGTCATCCGGTAAATGGATG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTGTGAAGGAGAGAAATaGTTAGCACTGGGACTACAG +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDCEGEK*LALGLQ
Trigger: CTGTAGTCCCAGTGCTAATCATTTCTCTCCTTCACA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTTCTTGCATTTGTGGTaGAGGTCCTGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHFLHLW*RSWQKL
Trigger: CAGCTTCTGCCAGGACCTGCACCACAAATGCAAGAA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGACCCAGGCATGGGGTaGACAGCAAGTTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHDPGMG*TASCWN
Trigger: ATTCCAGCAACTTGCTGTGCACCCCATGCCTGGGTC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGGTCCTCGGCACCAGTaGCTGAAGAGGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHGPRHQ*LKRFFW
Trigger: CCAGAAAAACCTCTTCAGGCACTGGTGCCGAGGACC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGAAGAAAAGGATCTATaGTCGCATAAAGGCCATACC +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFEEKDL*SHKGHT
Trigger: GGTATGGCCTTTATGCGAGCATAGATCCTTTTCTTC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATACAGGTGGGAATGCTTaGTCTGAATCAAAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHTGGNA*SESKPV
Trigger: GACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATGTTTGTGTGTAAGGTaGATCACCAGCCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKCLCVR*ITSLKG
Trigger: TCCTTTCAGGCTGGTGATGCACCTTACACACAAACA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAACTGTTCCTGAATATGTaGATGGGTGCACACTTATTT +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHRELFLNM*MGAHLF
Trigger: AAATAAGTGTGCACCCATGCACATATTCAGGAACAG...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCTGACAAGCAGAGTTTaGGGTTATAGTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFLTSRV*GYSGRR
Trigger: TCTTCTTCCACTATAACCCCAAACTCTGCTTGTCAG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGCACAGAGGGGTTGGTaGCATCTGTCTGGACATAAA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHAQRGW*HLSGHK
Trigger: TTTATGTCCAGACAGATGCCACCAACCCCTCTGTGC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACATTGGGGTCGGAGGGTaGTTTCCACTTCAGAATAAT +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDIGVGG*FPLQNN
Trigger: ATTATTCTGAAGTGGAAACCACCCTCCGACCCCAAT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATATCTTCAGACTCGAATaGTGGAGACCAGGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHIFRLE*WRPGPR
Trigger: TCGAGGACCTGGTCTCCACCATTCGAGTCTGAAGAT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTTGACAGTAAAATCATaGGCGACCATGCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRLTVKS*ATMQFL
Trigger: GAGAAACTGCATGGTCGCCCATGATTTTACTGTCAA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAAAAAACACAAAATCCTaGTTTGAAACCGTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: VRMFTPGRGNATRGTHREKNTKS*FETVVA
Trigger: GGCAACGACGGTTTCAAACCAGGATTTTGTGTTTTT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCCCATTCGGAAGTTCTTaGTGGTGTGTAAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFPFGSS*WCVRSF
Trigger: AAAAGACCTTACACACCACCAAGAACTTCCGAATGG...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACAAAGAGAAGAAACGGTaGATTCACGCCCATTCGGAA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDKEKKR*IHAHSE
Trigger: TTCCGAATGGGCGTGAATCCACCGTTTCTTCTCTTT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGAAGGTACACCTTGCTaGGTTACCCCATATATCAGA +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIREGTPC*VTPYIR
Trigger: TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATTGGTATTCTCCTCCTaGAAGAAGGAACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRLVFSS*KKELLC
Trigger: ACACAGGAGTTCCTTCTTCCAGGAGGAGAATACCAA...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTTGGTATTCTCCTCCTaGAAGAAGGAACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDLVFSS*KKELLC
Trigger: ACACAGGAGTTCCTTCTTCCAGGAGGAGAATACCAA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp GACCAAGACGTACTCTCAGTGCACCTCTCTCTTACATaGCTTAGATGTTCCCAAAGTCCATCCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: DQDVLSVHLSLT*LRCSQSPSRLL
Trigger: CAACAACCTGGATGGACTTTGGGAACATCTAAGCAATGTAAGAGAGAGGTGCACTGAGAGTACGTCTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp AGAAGAAACGGTGGATTCACGCCCATTCGGAAGTTCTaGGTGGTGTGTAAGGTCTTTTTCACGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RRNGGFTPIRKF*VVCKVFFTVSP
Trigger: AGGAGAAACCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCACCGTTTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp GGTTATCAAAGCTGCACAAGGTCCAATAATATCAGCTaGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GYQSCTRSNNIS*RSVKPQHRGPR
Trigger: CCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGATATTATTGGACCTTGTGCAGCTTTGATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCTTCGGGCCTCGTTTTaGACATCAAGAGTATCTGCA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHLRASF*TSRVSA
Trigger: TGCAGATACTCTTGATGTTCAAAACGAGGCCCGAAG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGCAGCTTCAGCCCTTTaGGGCAATAATCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHAASAL*GNNPAR
Trigger: TCGAGCTGGATTATTGCCTCAAAGGGCTGAAGCTGC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGATACCCTCCATCCATaGCAAATTTCAACACCTGTT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKDTLHP*QISTPV
Trigger: AACAGGTGTTGAAATTTGTCATGGATGGAGGGTATC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGATACCCTCCATCCATaGCAAATTTCAACACCTGTT +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDDTLHP*QISTPV
Trigger: AACAGGTGTTGAAATTTGTCATGGATGGAGGGTATC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGGCATTCGAATCAGCTaGTACACACGTTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHGIRIS*YTRSLI
Trigger: AATCAGGGAACGTGTGTATCAGCTGATTCGAATGCC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTTGGTAAGGCTGTTCTaGCAAGCTGGTGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHLVRLF*QAGDFP
Trigger: TGGGAAATCACCAGCTTGGCAGAACAGCCTTACCAA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATGTGGTGGTTCTTTTTaGAAAGAGAAGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRCGGSF*KEKKRW
Trigger: CCACCGTTTCTTCTCTTTGCAAAAAGAACCACCACA...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTGTGGTGGTTCTTTTTaGAAAGAGAAGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDCGGSF*KEKKRW
Trigger: CCACCGTTTCTTCTCTTTGCAAAAAGAACCACCACA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATAACCCAATAGCTGTTTaGTCTTTTCACTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYNPIAV*SFHCGS
Trigger: ACTGCCACAGTGAAAAGAGCAAACAGCTATTGGGTT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATATGTCAAAGGAGGTTTaGAACCCAATAGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYMSKEV*NPIAVC
Trigger: GCAAACAGCTATTGGGTTGCAAACCTCCTTTGACAT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGAATATGTGCATGGGTaGACACTTATTTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIREYVHG*TLILRL
Trigger: GAGCCTCAAAATAAGTGTGCACCCATGCACATATTC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATACGTCACCGAGTCGATaGTCTTCTCGCCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHTSPSR*SSRLLG
Trigger: TCCTAGAAGGCGAGAAGACCATCGACTCGGTGACGT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAACTGACAAGCAGAGTTTaGGGTTATAGTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKLTSRV*GYSGRR
Trigger: TCTTCTTCCACTATAACCCCAAACTCTGCTTGTCAG...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGGGTCTTCACAAAGATaGCATACTGGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHGSSQR*HTGSRA
Trigger: AGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCTGAGAGTCTGTCTTTaGACAGGAGCAGCATTCGCC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHLRVCL*TGAAFA
Trigger: GGCGAATGCTGCTCCTGTCCAAAGACAGACTCTCAG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAACTTGAAATTCTCCTaGAACAGGGCTGGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKNLKFS*NRAGCF
Trigger: AAAACACCCAGCCCTGTTCCAGGAGAATTTCAAGTT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATATTCTTACTGGTCCCTaGCATTCGAATCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYILTGP*HSNQLI
Trigger: TATCAGCTGATTCGAATGCCAGGGACCAGTAAGAAT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCCTCAAAATTCTTACTaGTCCCTGGCATTCGAATCA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDPQNSY*SLAFES
Trigger: TGATTCGAATGCCAGGGACCAGTAAGAATTTTGAGG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCTTTGTAGAACAGCATaGACCCCAAGAGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHLCRTA*TPRGLG
Trigger: TCCGAGACCTCTTGGGGTTCATGCTGTTCTACAAAG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGAGATACTCAGGGTTTaGAGAAGCGTAAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHEILRV*RSVKRS
Trigger: GGACCGCTTTACGCTTCTTCAAACCCTGAGTATCTC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTTTGTCTTTTATACTaGAGCTCAGACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFFCLLY*SSDTSK
Trigger: TTTGCTGGTGTCTGAGCTTCAGTATAAAAGACAAAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAACAGCTCCTAAAACCTaGACATTTTCTGATGCGTAT +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKTAPKT*TFSDAY
Trigger: ATACGCATCAGAAAATGTTCAGGTTTTAGGAGCTGT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCAATTCTCCAGCTCATaGAACCTAGTGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHQFSSS*NLVRLF
Trigger: GAACAACCTCACTAGGTTGCATGAGCTGGAGAATTG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCATTTGTAAAAACAGGTaGTTTCTTTCCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFICKNR*FLSICW
Trigger: CCAGCAGATGGAAAGAAAGCACCTGTTTTTACAAAT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTGTTTGTGTGTAAGGTaGATCACCAGCCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHCLCVR*ITSLKG
Trigger: TCCTTTCAGGCTGGTGATGCACCTTACACACAAACA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCGTGTGACTTACAGATaGTCGGGCAAACTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHRVTYR*SGKLSG
Trigger: GCCAGAAAGTTTGCCCGACCATCTGTAAGTCACACG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTGCACAGCAAGTTGCTaGAATTCATCGTGTACCCGG +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHCTASC*NSSCTR
Trigger: CCGGGTACACGATGAATTCCAGCAACTTGCTGTGCA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTTTTCACAGGATGCCTaGTCCCCATTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHFSQDA*SPLVFR
Trigger: CCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATCACTTCAGAATAATCTaGGATGATGAGTTAGACACT +
Preference number: 4 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNHFRII*DDELDT
Trigger: AGTGTCTAACTCATCATCCCAGATTATTCTGAAGTG...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGATGCACAAACTTCTTaGCGTTCAGGTAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHDAQTS*RSGRPS
Trigger: GGATGGCCTACCTGAACGCCAAGAAGTTTGTGCATC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGTCAGTGACTCTCTCTaGACAGTTGTCGGGTTGATC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHVSDSL*TVVGLI
Trigger: GATCAACCCGACAACTGTCCAGAGAGAGTCACTGAC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAAAAAACACAAAATCCTaGTTTGAAACCGTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRKNTKS*FETVVA
Trigger: GGCAACGACGGTTTCAAACCAGGATTTTGTGTTTTT...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTTTGAGCAGCTGTGGTaGTTCTTTTTGCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDFEQLW*FFLQRE
Trigger: TTCTCTTTGCAAAAAGAACCACCACAGCTGCTCAAA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATTCTTTGAGCAGCTGTaGTGGTTCTTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRFFEQL*WFFLQR
Trigger: TCTTTGCAAAAAGAACCACCACAGCTGCTCAAAGAA...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTACATCATGACAGCCTaGAACTTAGTTTATGTTTGG +
Preference number: 4 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFYIMTA*NLVYVW
Trigger: CCAAACATAAACTAAGTTCCAGGCTGTCATGATGTA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGAAGGTACACCTTGCTaGGTTACCCCATATATCAGA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHEGTPC*VTPYIR
Trigger: TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCCCTTATCCAAAATATaGAAGCAGCAGCTATTGGTC +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHPLSKI*KQQLLV
Trigger: GACCAATAGCTGCTGCTTTCATATTTTGGATAAGGG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCATAATCACTCCAAATaGAATGCTCCTCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHHNHSK*NAPPLA
Trigger: GGCCAAGGGAGGAGCATTTCATTTGGAGTGATTATG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGAAGATTTTCTGAAGTaGCACCCCTCTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHEDFLK*HPSLCT
Trigger: GGTACACAGAGAGGGGTGTCACTTCAGAAAATCTTC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAGTCTGCAAGGGCAGTaGCTAAAAGTACAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHSLQGQ*LKVQEQ
Trigger: CTGCTCTTGTACTTTTAGGCACTGCCCTTGCAGACT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCACGTACACAGAGCATaGAAACACATCACTGGCACT +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHHVHRA*KHITGT
Trigger: AGTGCCAGTGATGTGTTTCCATGCTCTGTGTACGTG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATACATCATGACAGCCTaGAACTTAGTTTATGTTTGG +
Preference number: 4 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKYIMTA*NLVYVW
Trigger: CCAAACATAAACTAAGTTCCAGGCTGTCATGATGTA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACACATTAATGGGTTTTaGATTGGAATTTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRHINGF*IGISLT
Trigger: TGTGAGGGAAATTCCAATCCAAAACCCATTAATGTG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAATTTGGCTGGTGGCTaGTTCTGGACCTTGACTAGT +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHNLAGG*FWTLTS
Trigger: ACTAGTCAAGGTCCAGAACCAGCCACCAGCCAAATT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCTGAAATTTCTTCAATaGGGCCGAGGTTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHLKFLQ*GRGWLL
Trigger: TAGAAGCCAACCTCGGCCTCATTGAAGAAATTTCAG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCAGAGAATCAGAGGATaGACACAGGTGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHQRIRG*TQVFLK
Trigger: CTTCAAGAACACCTGTGTTCATCCTCTGATTCTCTG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCCAATAATATCAGCTTaGGGTCAGTCAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHPIISA*GQSNPN
Trigger: GTTGGGGTTTGACTGACCTCAAGCTGATATTATTGG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTTCCATTGCACTCCCTaGAAGTCCACCATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHFHCTP*KSTMFF
Trigger: AAAGAACATGGTGGACTTTCAGGGAGTGCAATGGAA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR GCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCTGTTCCTGAATATGTaGATGGGTGCACACTTATTT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHLFLNM*MGAHLF
Trigger: AAATAAGTGTGCACCCATGCACATATTCAGGAACAG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTTCTTTGAGCAGCTGTaGTGGTTCTTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHFFEQL*WFFLQR
Trigger: TCTTTGCAAAAAGAACCACCACAGCTGCTCAAAGAA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCACTTCAGAATAATCTaGGATGATGAGTTAGACACT +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHHFRII*DDELDT
Trigger: AGTGTCTAACTCATCATCCCAGATTATTCTGAAGTG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CCA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCACATTAATGGGTTTTaGATTGGAATTTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHHINGF*IGISLT
Trigger: TGTGAGGGAAATTCCAATCCAAAACCCATTAATGTG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR TCA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATACAGCTCCTAAAACCTaGACATTTTCTGATGCGTAT +
Preference number: 4 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHTAPKT*TFSDAY
Trigger: ATACGCATCAGAAAATGTTCAGGTTTTAGGAGCTGT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp AGGTTCACAGTTAAATCCTCTGCAGGACTAGTTAAATaGGTAACCAAACGAGTCCACCTTAAGATGAACAGA +
Preference number: 4 (lower is better)
Translates to: RFTVKSSAGLVK*VTKRVHLKMNR
Trigger: TCTGTTCATCTTAAGGTGGACTCGTTTGGTTACCAATTTAACTAGTCCTGCAGAGGATTTAACTGTGAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
3UTR CAA 72 bp CCAGGACAACCGTGTCTTTCTAGGACCAAAGTTTTATaGTTACAAAGTCAACATTTCCTAATGTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PGQPCLSRTKVL*LQSQHFLMSKE
Trigger: CTCCTTTGACATTAGGAAATGTTGACTTTGTAACAATAAAACTTTGGTCCTAGAAAGACACGGTTGTCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 90 bp TCTGCGGGCTCCGGGACAGAGGGACGCGCGGACCGACGGACTAGCTaGCTGGCGGGCGGGCACCTGGGCTGGCGGGTGGCGGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: SAGSGTEGRADRRTS*LAGGHLGWRVAGGR
Trigger: CCGCCCGCCCGCCACCCGCCAGCCCAGGTGCCCGCCCGCCAGTCAGCTAGTCCGTCGGTCCGCGCGTCCCTCTGTCCCGGAGCCCGCAGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS CCA 90 bp CTGGCCCGCGGGGGTCATGCTCCGAGGCGGCCACCCAAGAGGCGCTaGGGGCCGCGCGTCCTTCTCTTCCACGCCCGCGACCCGCGGGCC +
Preference number: 5 (lower is better)
Translates to: LARGGHAPRRPPKRR*GPRVLLFHARDPRA
Trigger: GGCCCGCGGGTCGCGGGCGTGGAAGAGAAGGACGCGCGGCCCCCAGCGCCTCTTGGGTGGCCGCCTCGGAGCATGACCCCCGCGGGCCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS GCA 90 bp GGGTCTCCTCGGATCAGAGCGCGCGGCGCTGGCCCGCGGGGGTCATaGTCCGAGGCGGCCACCCAAGAGGCGCTGGGGGCCGCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: GSPRIRARGAGPRGS*SEAATQEALGAARP
Trigger: AGGACGCGCGGCCCCCAGCGCCTCTTGGGTGGCCGCCTCGGAGCATGACCCCCGCGGGCCAGCGCCGCGCGCTCTGATCCGAGGAGACCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS CCA 90 bp GCGCTGCGCCCGGGACTGTCTCTCGGCTCTCGGCCCCGCGCGCTCTaGGTCGCGATCTGCGGGCTCCGGGACAGAGGGACGCGCGGACCG +
Preference number: 5 (lower is better)
Translates to: ALRPGLSLGSRPRAL*VAICGLRDRGTRGP
Trigger: CGGTCCGCGCGTCCCTCTGTCCCGGAGCCCGCAGATCGCGACCCAGAGCGCGCGGGGCCGAGAGCCGAGAGACAGTCCCGGGCGCAGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS CCA 90 bp TGGCTGCGGGAGCGCGGGGTCTCCTCGGATCAGAGCGCGCGGCGCTaGCCCGCGGGGGTCATGCTCCGAGGCGGCCACCCAAGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: WLRERGVSSDQSARR*PAGVMLRGGHPRGA
Trigger: AGCGCCTCTTGGGTGGCCGCCTCGGAGCATGACCCCCGCGGGCCAGCGCCGCGCGCTCTGATCCGAGGAGACCCCGCGCTCCCGCAGCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS TCA 90 bp GCCCGCAAGGGAGGTGGCCCGGATTCGCACGCTGTAGTTCCCCGGTaGCAGCCCACGCAGCCTGCAGCCCCGTTCCAGAGCGAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: ARKGGGPDSHAVVPR*QPTQPAAPFQSEVL
Trigger: AAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp TGCGGCAGGCCACGCACTTGGTGGGGTCGTCGGGCTGAGAACAGTTaGCCAGGCACTCGCTGTGGCAACAGAGGCCTTCGGCGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: CGRPRTWWGRRAENS*PGTRCGNRGLRRCS
Trigger: GCTGCACCGCCGAAGGCCTCTGTTGCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 90 bp ACGGGGGCGGGCAGGTCTCCACACACCTGCCGTCCAGGTAGAAGTTaGGGCAGGCCACGCACTTGGTGGGGTCGTCGGGCTGAGAACAGT +
Preference number: 5 (lower is better)
Translates to: TGAGRSPHTCRPGRS*GRPRTWWGRRAENS
Trigger: ACTGTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGACCTGCCCGCCCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 90 bp CCCGGATTCGCACGCTGTAGTTCCCCGGTGACAGCCCACGCAGCCTaGAGCCCCGTTCCAGAGCGAAGTGCTTGCGGGAGACGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: PGFARCSSPVTAHAA*SPVPERSACGRRRD
Trigger: ATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGCGTGCGAATCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 90 bp CACACCTGCCGTCCAGGTAGAAGTTGCGGCAGGCCACGCACTTGGTaGGGTCGTCGGGCTGAGAACAGTTGCCCAGGCACTCGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: HTCRPGRSCGRPRTW*GRRAENSCPGTRCG
Trigger: GCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 90 bp GCCTGTGCTCCTCCGGACTCGTGGGCACGCTGGTCGAGGAAGTGTTaGGGAAAGCTGCCACCGTGGGCACGGCCACCGTCACATTCCCAA +
Preference number: 5 (lower is better)
Translates to: ACAPPDSWARWSRKC*GKLPPWARPPSHSQ
Trigger: TTGGGAATGTGACGGTGGCCGTGCCCACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp AGTCCTGGAAGTGGTAGTACGGGGGCGGGCAGGTCTCCACACACCTaGCGTCCAGGTAGAAGTTGCGGCAGGCCACGCACTTGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SPGSGSTGAGRSPHT*RPGRSCGRPRTWWG
Trigger: ACCCCACCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGACCTGCCCGCCCCCGTACTACCACTTCCAGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 90 bp CTCCGGACTCGTGGGCACGCTGGTCGAGGAAGTGTTGGGGAAAGCTaGCACCGTGGGCACGGCCACCGTCACATTCCCAACATCGCCAAG +
Preference number: 5 (lower is better)
Translates to: LRTRGHAGRGSVGES*HRGHGHRHIPNIAK
Trigger: CTTGGCGATGTTGGGAATGTGACGGTGGCCGTGCCCACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp CCCGGTGACAGCCCACGCAGCCTGCAGCCCCGTTCCAGAGCGAAGTaGTTGCGGGAGACGCAGAGATGCAGCTCCTCATCACCATATCGC +
Preference number: 5 (lower is better)
Translates to: PGDSPRSLQPRSRAK*LRETQRCSSSSPYR
Trigger: GCGATATGGTGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTCACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 90 bp CCACACACCTGCCGTCCAGGTAGAAGTTGCGGCAGGCCACGCACTTaGTGGGGTCGTCGGGCTGAGAACAGTTGCCCAGGCACTCGCTGT +
Preference number: 5 (lower is better)
Translates to: PHTCRPGRSCGRPRT*WGRRAENSCPGTRC
Trigger: ACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 90 bp TCGTGGGCACGCTGGTCGAGGAAGTGTTGGGGAAAGCTGCCACCGTaGGCACGGCCACCGTCACATTCCCAACATCGCCAAGGGACCTGC +
Preference number: 5 (lower is better)
Translates to: SWARWSRKCWGKLPP*ARPPSHSQHRQGTC
Trigger: GCAGGTCCCTTGGCGATGTTGGGAATGTGACGGTGGCCGTGCCCACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAGCGTGCCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTCGACAAACTGCCCGTaGATGACGGTGGCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSTNCP*MTVAGQ
Trigger: CTGCCCCGCCACCGTCATCAACGGGCAGTTTGTCGA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 90 bp AGCTCTTCAGGTCTCCGTGAGCCATCAGCTCCATCACCACCAGCGTaGGCTGGCCCTTGGACACCACTCCCAGGAGGCGCACCACGTGAT +
Preference number: 5 (lower is better)
Translates to: SSSGLREPSAPSPPA*AGPWTPLPGGAPRD
Trigger: ATCACGTGGTGCGCCTCCTGGGAGTGGTGTCCAAGGGCCAGCCCACGCTGGTGGTGATGGAGCTGATGGCTCACGGAGACCTGAAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000593970.1
CDS GCA 90 bp GTGACAGCCCACGCAGCCTGCAGCCCCGTTCCAGAGCGAAGTGCTTaGGGGAGACGCAGAGATGCAGCTCCTCATCACCATATCGCCGAT +
Preference number: 5 (lower is better)
Translates to: VTAHAACSPVPERSA*GRRRDAAPHHHIAD
Trigger: ATCGGCGATATGGTGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 90 bp ACCACTCCCAGGAGGCGCACCTGCAGAGCAAGCAACCAGGGTTCTTaGAGGAGGGTCCGTGATTCGACTCACCAGGGTTCTCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: TTPRRRTCRASNQGS*RRVRDSTHQGSPPS
Trigger: GGAGGGAGGAGAACCCTGGTGAGTCGAATCACGGACCCTCCTCCAAGAACCCTGGTTGCTTGCTCTGCAGGTGCGCCTCCTGGGAGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGGGTGGTTCTGTGATTaGGGGTCGTTGGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRGWFCD*GSLDLR
Trigger: CCTGAGGTCCAACGACCCCAAATCACAGAACCACCC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp GTCATCAGCCTTGGCTTCAGGCATGGTCCTCGCACTGACGTAGGCTaGCACACTGCACCGTTCCTCAGGGGTGTCCTGGTTGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: VISLGFRHGPRTDVG*HTAPFLRGVLVASL
Trigger: CAGGCTTGCAACCAGGACACCCCTGAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGCCTGAAGCCAAGGCTGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS GCA 90 bp TCCCTCCCTGGTGTCTATGTCACACACAGCACCCTGTGGCCTGGATaGAGCGTGCTCAGCCCTGGTCTAGGAGAGCAGACATACCTGCCC +
Preference number: 5 (lower is better)
Translates to: SLPGVYVTHSTLWPG*SVLSPGLGEQTYLP
Trigger: GGGCAGGTATGTCTGCTCTCCTAGACCAGGGCTGAGCACGCTGCATCCAGGCCACAGGGTGCTGTGTGTGACATAGACACCAGGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CCA 90 bp CCTTGTTCACCACCTTCTCAAAAGGCCTGTGCTCCTCCGGACTCGTaGGCACGCTGGTCGAGGAAGTGTTGGGGAAAGCTGCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: PCSPPSQKACAPPDS*ARWSRKCWGKLPPW
Trigger: CCACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACAGGCCTTTTGAGAAGGTGGTGAACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CCA 90 bp GGGTTCTCCTCCCTCCCTGGTGTCTATGTCACACACAGCACCCTGTaGCCTGGATGCAGCGTGCTCAGCCCTGGTCTAGGAGAGCAGACA +
Preference number: 5 (lower is better)
Translates to: GFSSLPGVYVTHSTL*PGCSVLSPGLGEQT
Trigger: TGTCTGCTCTCCTAGACCAGGGCTGAGCACGCTGCATCCAGGCCACAGGGTGCTGTGTGTGACATAGACACCAGGGAGGGAGGAGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CCA 90 bp GGAGGAGGGTCCGTGATTCGACTCACCAGGGTTCTCCTCCCTCCCTaGTGTCTATGTCACACACAGCACCCTGTGGCCTGGATGCAGCGT +
Preference number: 5 (lower is better)
Translates to: GGGSVIRLTRVLLPP*CLCHTQHPVAWMQR
Trigger: ACGCTGCATCCAGGCCACAGGGTGCTGTGTGTGACATAGACACCAGGGAGGGAGGAGAACCCTGGTGAGTCGAATCACGGACCCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTCCAGAGCGAAGTGCTaGCGGGAGACGCAGAGATGC +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGSRAKC*RETQRC
Trigger: GCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTCCGTCCAAGAGCCGTaGCCCGCAAGGGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQSVQEP*PAREVA
Trigger: GGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGGA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGAGCCCAGGGCACCTTaGTGCTCACTTCAGGGGGAT +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGEPRAP*CSLQGD
Trigger: ATCCCCCTGAAGTGAGCACAAAGGTGCCCTGGGCTC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 90 bp GGCCAACAATGTCATCAGCCTTGGCTTCAGGCATGGTCCTCGCACTaGCGTAGGCTGCCACACTGCACCGTTCCTCAGGGGTGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GQQCHQPWLQAWSSH*RRLPHCTVPQGCPG
Trigger: ACCAGGACACCCCTGAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGCCTGAAGCCAAGGCTGATGACATTGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS TCA 90 bp GCGCACCTGCAGAGCAAGCAACCAGGGTTCTTGGAGGAGGGTCCGTaGTTCGACTCACCAGGGTTCTCCTCCCTCCCTGGTGTCTATGTC +
Preference number: 5 (lower is better)
Translates to: AHLQSKQPGFLEEGP*FDSPGFSSLPGVYV
Trigger: GACATAGACACCAGGGAGGGAGGAGAACCCTGGTGAGTCGAATCACGGACCCTCCTCCAAGAACCCTGGTTGCTTGCTCTGCAGGTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS GCA 90 bp GAGATGACCAGCGACTCCTTGTTCACCACCTTCTCAAAAGGCCTGTaGTCCTCCGGACTCGTGGGCACGCTGGTCGAGGAAGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: EMTSDSLFTTFSKGL*SSGLVGTLVEEVLG
Trigger: CCCCAACACTTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACAGGCCTTTTGAGAAGGTGGTGAACAAGGAGTCGCTGGTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CCA 90 bp CTCCTCCCTCCCTGGTGTCTATGTCACACACAGCACCCTGTGGCCTaGATGCAGCGTGCTCAGCCCTGGTCTAGGAGAGCAGACATACCT +
Preference number: 5 (lower is better)
Translates to: LLPPWCLCHTQHPVA*MQRAQPWSRRADIP
Trigger: AGGTATGTCTGCTCTCCTAGACCAGGGCTGAGCACGCTGCATCCAGGCCACAGGGTGCTGTGTGTGACATAGACACCAGGGAGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTGCAACCTAGTGAGGTaGTTCCGGATATCCATGCCG +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRCNLVR*FRISMP
Trigger: CGGCATGGATATCCGGAACAACCTCACTAGGTTGCA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGGGGGTGCACAGCAAGTaGCTGGAATTCATCGTGTAC +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRGVHSK*LEFIVY
Trigger: GTACACGATGAATTCCAGCAACTTGCTGTGCACCCC...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGATGACCGAGGCCTCATaGAGGAACTCAATCCGCTCT +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRMTEAS*RNSIRS
Trigger: AGAGCGGATTGAGTTCCTCAATGAGGCCTCGGTCAT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGATCCGCCCGTTTTTCTaGCCTCCGTTCATGTGTGTG +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRIRPFF*PPFMCV
Trigger: CACACACATGAACGGAGGCAAGAAAAACGGGCGGAT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAAGAGCAGCAAGATTaGGGCCCCACTGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATQEQQD*GPTGPA
Trigger: GGCAGGACCAGTGGGGCCCAAATCTTGCTGCTCTTG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGACTGGTGAATCCCATTaGCAAGGGGCAGGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGTGESH*QGAGPA
Trigger: TGCTGGGCCTGCCCCTTGCAAATGGGATTCACCAGT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp AACAGTTGCCCAGGCACTCGCTGTGGCAACAGAGGCCTTCGGCGGTaGAGCCGTGTGACTTACAGATGGTCGGGCAAACTTTCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: NSCPGTRCGNRGLRR*SRVTYRWSGKLSGS
Trigger: ACTGCCAGAAAGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCTGTTGCCACAGCGAGTGCCTGGGCAACTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 90 bp AATAGTCTGTCACGTAGAAATAGGTGGGTTCCGTCCAAGAGCCGTTaGCCGCAAGGGAGGTGGCCCGGATTCGCACGCTGTAGTTCCCCG +
Preference number: 5 (lower is better)
Translates to: NSLSRRNRWVPSKSR*PQGRWPGFARCSSP
Trigger: CGGGGAACTACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGGAACCCACCTATTTCTACGTGACAGACTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 90 bp ATGACGTACTGGTGGCAGCCCTGCCTCCGCGAGTTCTTGCATTTGTaGTGCAGGTCCTGGCAGAAGCTGAAGTTCACACAGCGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: MTYWWQPCLREFLHL*CRSWQKLKFTQRQS
Trigger: GGACTGGCGCTGTGTGAACTTCAGCTTCTGCCAGGACCTGCACCACAAATGCAAGAACTCGCGGAGGCAGGGCTGCCACCAGTACGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS-3UTR CAA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAGCGGGGCAGTTGGTCTaGCCCTTCGCGGTACCCGGA +
Preference number: 5 (lower is better)
Translates to: VRMFTPGRGNATRGTHREAGQLV*PFAVPG
Trigger: TCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGC...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTCAGCTGCCAGATTGTaGCCTCCTCGAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRSAARL*PPRMLM
Trigger: CATCAACATTCGAGGAGGCAACAATCTGGCAGCTGA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGATGCCTGGTCCCCATaGGTCTTCAGGGCAATGTCG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATDAWSP*VFRAMS
Trigger: CGACATTGCCCTGAAGACCAATGGGGACCAGGCATC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGGGTGGTTCTGTGATTaGGGGTCGTTGGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATGWFCD*GSLDLR
Trigger: CCTGAGGTCCAACGACCCCAAATCACAGAACCACCC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTGGGTGATGTTGCCATaGGGGTCGGAGGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATWVMLP*GSEGGF
Trigger: GAAACCACCCTCCGACCCCAATGGCAACATCACCCA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTCACTCTCGGGAGCCTaGTTCTCCTCGCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATSLSGA*FSSLWK
Trigger: CTTCCACAGCGAGGAGAACAAGGCTCCCGAGAGTGA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAATCAAAGCCCGTCTTaGCCCCGGCAGCCATCTCTC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATNQSPS*PRQPSL
Trigger: GAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGATT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 90 bp CAGGCACTCGCTGTGGCAACAGAGGCCTTCGGCGGTGCAGCCGTGTaGCTTACAGATGGTCGGGCAAACTTTCTGGCAGTGACTATGAGT +
Preference number: 5 (lower is better)
Translates to: QALAVATEAFGGAAV*LTDGRANFLAVTMS
Trigger: ACTCATAGTCACTGCCAGAAAGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCTGTTGCCACAGCGAGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 90 bp TTGATGATCAGACTCCCGTTGATGACGGTGCATCCTCGGAGCTCCTaGGCAGACGTCACCGAGTCGATGGTCTTCTCGCCTTCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: LMIRLPLMTVHPRSS*ADVTESMVFSPSRR
Trigger: CCTCCTAGAAGGCGAGAAGACCATCGACTCGGTGACGTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCTGATCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCATGATCAGACTCCCGTaGATGACGGTGCATCCTCGG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATMIRLP*MTVHPR
Trigger: CCGAGGATGCACCGTCATCAACGGGAGTCTGATCAT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACTACTGGGTCCAGGGCTaGAGACCCCGCATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: ITGGSSHGWFWLLECRANYWVQG*RPRISH
Trigger: GTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGTA...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGACAATGTCATCAGCCTaGGCTTCAGGCATGGTCCTC +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGTMSSA*ASGMVL
Trigger: GAGGACCATGCCTGAAGCCAAGGCTGATGACATTGT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCATGATGTCCCTGGCATaGCCCTCATACACCATGCCG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATMMSLA*PSYTMP
Trigger: CGGCATGGTGTATGAGGGCAATGCCAGGGACATCAT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGTGGACAGTTGTCGGGTaGATCCAGATACCCTCCATC +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGWTVVG*IQIPSI
Trigger: GATGGAGGGTATCTGGATCAACCCGACAACTGTCCA...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAACTGTGGAAACCCCTaGCCCTCCAGGTTCACAGTT +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGNCGNP*PSRFTV
Trigger: AACTGTGAACCTGGAGGGCAAGGGGTTTCCACAGTT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGGTTTGAAACCGTCGTaGCCCCAAAGGAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATGLKPS*PQRSSN
Trigger: GTTGCTGCTCCTTTGGGGCAACGACGGTTTCAAACC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGACCTATGCAGACCCTaGTGTCAGTTCCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGDLCRP*CQFPQL
Trigger: AAGCTGTGGGAACTGACACAAGGGTCTGCATAGGTC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATACTGAGCGGAGGCCCTaGCGGTGGTGGCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHTERRP*RWWPRP
Trigger: GGGTCGGGGCCACCACCGCAAGGGCCTCCGCTCAGT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTGCAACCTAGTGAGGTaGTTCCGGATATCCATGCCG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATCNLVR*FRISMP
Trigger: CGGCATGGATATCCGGAACAACCTCACTAGGTTGCA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGCGGGGCAGTTGGTCTaGCCCTTCGCGGTACCCGGA +
Preference number: 5 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRAGQLV*PFAVPG
Trigger: TCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCTCTGAGAGTCTGTCTTaGGACAGGAGCAGCATTCGC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATSESLS*DRSSIR
Trigger: GCGAATGCTGCTCCTGTCCAAAGACAGACTCTCAGA...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTCCGTCCAAGAGCCGTaGCCCGCAAGGGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYSVQEP*PAREVA
Trigger: GGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGGA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGAATATTCACCTTCCATaGCACTCCCTGAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRNIHLP*HSLKVH
Trigger: GTGGACTTTCAGGGAGTGCAATGGAAGGTGAATATT...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAAAGCTGCAGCACATTaGATCCTGCGTTGCCAACGC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATKAAAH*ILRCQR
Trigger: GCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 90 bp TCGTGTACCCGGAGGGACACTCAGGGATGCACTTGTTGTTGTGAATaGCGTACTGGTGGCAGCCCTGCCTCCGCGAGTTCTTGCATTTGT +
Preference number: 5 (lower is better)
Translates to: SCTRRDTQGCTCCCE*RTGGSPASASSCIC
Trigger: ACAAATGCAAGAACTCGCGGAGGCAGGGCTGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTCCGGGTACACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 90 bp TTCATCGTGTACCCGGAGGGACACTCAGGGATGCACTTGTTGTTGTaGATGACGTACTGGTGGCAGCCCTGCCTCCGCGAGTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: FIVYPEGHSGMHLLL*MTYWWQPCLREFLH
Trigger: ATGCAAGAACTCGCGGAGGCAGGGCTGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTCCGGGTACACGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 90 bp CAGCATTCGCCGGCCGAATCCTCATACTCACTCTGGTTGTGCTTCTaGGAATCTTCAGACTCGAATGGTGGAGACCAGGTCCTCGAGGGC +
Preference number: 5 (lower is better)
Translates to: QHSPAESSYSLWLCF*ESSDSNGGDQVLEG
Trigger: GCCCTCGAGGACCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGTGAGTATGAGGATTCGGCCGGCGAATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 90 bp CACCAAGCCAATTGGCACCCACTAAGAGAGCCCAGCGCCAAGTCCTaGCCTGGGGACGAAAACCACGTTGTGCAGGTAATCCTCAAACGT +
Preference number: 5 (lower is better)
Translates to: HQANWHPLREPSAKS*PGDENHVVQVILKR
Trigger: ACGTTTGAGGATTACCTGCACAACGTGGTTTTCGTCCCCAGGTCAGGACTTGGCGCTGGGCTCTCTTAGTGGGTGCCAATTGGCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598216.1
CDS CCA 90 bp AGCCAATTGGCACCCACTAAGAGAGCCCAGCGCCAAGTCCTGACCTaGGGACGAAAACCACGTTGTGCAGGTAATCCTCAAACGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SQLAPTKRAQRQVLT*GRKPRCAGNPQTSS
Trigger: GGAAGACGTTTGAGGATTACCTGCACAACGTGGTTTTCGTCCCCAGGTCAGGACTTGGCGCTGGGCTCTCTTAGTGGGTGCCAATTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598216.1
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACACGGTGGCGGGGCAGTaGGTCTTGCCCTTCGCGGTA +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDTVAGQ*VLPFAV
Trigger: TACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTCGACAAACTGCCCGTaGATGACGGTGGCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFSTNCP*MTVAGQ
Trigger: CTGCCCCGCCACCGTCATCAACGGGCAGTTTGTCGA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGACCACCGTCCAACTGTaGGAACCACACGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: VTLLVAALTGGSGYLNAGTTVQL*EPHASC
Trigger: GCAGGATGCGTGTGGTTCCAACAGTTGGACGGTGGT...CCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTACTGGGTCCAGGGCTaGAGACCCCGCATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRYWVQG*RPRISH
Trigger: GTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGTA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTACTGGGTCCAGGGCTaGAGACCCCGCATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFYWVQG*RPRISH
Trigger: GTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGTA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGCAGGGCCAACTGGGTGATGTTGCCATaGGGGTCGGAGGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: ITGGSSHGWFWLLECRANWVMLP*GSEGGF
Trigger: GAAACCACCCTCCGACCCCAATGGCAACATCACCCA...GTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGATGACCAGCGACTCCTaGTTCACCACCTTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGMTSDS*FTTFSK
Trigger: TTTTGAGAAGGTGGTGAACAAGGAGTCGCTGGTCAT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCATCTGAATCATCTCTaGAAGGGTAGGGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQHLNHL*KGRGRA
Trigger: CGCCCTCCCCCTACCCTTCAAGAGATGATTCAGATG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGGTTTGAAACCGTCGTaGCCCCAAAGGAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQGLKPS*PQRSSN
Trigger: GTTGCTGCTCCTTTGGGGCAACGACGGTTTCAAACC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGCCCATTCGGAAGTTCTaGGTGGTGTGTAAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGPIRKF*VVCKVF
Trigger: AAAGACCTTACACACCACCAAGAACTTCCGAATGGG...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGAGTTCACTGTGTTCTTaGAGCAGCTGTGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGSSLCS*SSCGGS
Trigger: AGAACCACCACAGCTGCTCAAAGAACACAGTGAACT...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAGGTGTACATGGTGCTACTaGGCTCTTGTAGGAAAACAT +
Preference number: 5 (lower is better)
Translates to: AAAHLILRCQRTGPRPPRCTWCY*ALVGKH
Trigger: ATGTTTTCCTACAAGAGCCAAGTAGCACCATGTACA...CCTGGGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 90 bp TCAAACGTCTTCCTAAACGAGGACTCCTCCAGCTCCTTCAGGATCTaGGAGTCTGTCTTTGGACAGGAGCAGCATTCGCCGGCCGAATCC +
Preference number: 5 (lower is better)
Translates to: SNVFLNEDSSSSFRI*ESVFGQEQHSPAES
Trigger: GGATTCGGCCGGCGAATGCTGCTCCTGTCCAAAGACAGACTCTCAGATCCTGAAGGAGCTGGAGGAGTCCTCGTTTAGGAAGACGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 90 bp CACAGAGCATGGAAACACATCACTGGCACTGAGATACTCAGGGTTTaGAGAAGCGTAAAGCGGTCCCAGCGGCCCATCTGGCTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: HRAWKHITGTEILRV*RSVKRSQRPIWLPL
Trigger: AAGAGGCAGCCAGATGGGCCGCTGGGACCGCTTTACGCTTCTTCAAACCCTGAGTATCTCAGTGCCAGTGATGTGTTTCCATGCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp AGGAAGGAGGTACCAAGTGCAACTCTGAAGGGGCATGCTGAAGTGTaGAGGGGCATGCCCAAGAGTCAAGGGCCTTACCTCATCACCATA +
Preference number: 5 (lower is better)
Translates to: RKEVPSATLKGHAEV*RGMPKSQGPYLITI
Trigger: TATGGTGATGAGGTAAGGCCCTTGACTCTTGGGCATGCCCCTGCACACTTCAGCATGCCCCTTCAGAGTTGCACTTGGTACCTCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597211.1
CDS-3UTR CAA 90 bp AAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGTGTGATTTGGGGTCGTaGGACCTCAGGGGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: KLRVTLLVAALTGGSGYLCDLGS*DLRGGS
Trigger: TGACCCACCCCTGAGGTCCAACGACCCCAAATCACA...CAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTCAGGGGTGTCCTGGTaGCAAGCCTGCAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRSGVSW*QACSSM
Trigger: CATCGAGCTGCAGGCTTGCAACCAGGACACCCCTGA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTCCAGAGCGAAGTGCTaGCGGGAGACGCAGAGATGC +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRSRAKC*RETQRC
Trigger: GCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGCAGGACTAGTTAAATaGGTAACCAAACGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGAGLVK*VTKRVH
Trigger: GTGGACTCGTTTGGTTACCAATTTAACTAGTCCTGC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCCAGGTTGTTGTGCTTaGGGATCTGACGTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQPGCCA*GSDVLG
Trigger: CCCAAGAACGTCAGATCCCAAAGCACAACAACCTGG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCCAACCCAATAGCTGTTaGCTCTTTTCACTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATQPNSC*LFSLWQ
Trigger: CTGCCACAGTGAAAAGAGCAAACAGCTATTGGGTTG...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGAGAAAGTGATGTGCTaGGTATTCTCCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATEKVMC*VFSSWK
Trigger: CTTCCAGGAGGAGAATACCAAGCACATCACTTTCTC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAACATTTGATCCTGCGTaGCCAACGCACAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: VRMFTPGRGNATRGTHRETFDPA*PTHRAE
Trigger: CTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp AGGAAGGATTGGACCGAGGCAAGGTCAGAATCCGCCCGTTTTTCTTaGCTCCGTTCATGTGTGTGTAAGGGATGTGTTCCTCGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: RKDWTEARSESARFS*LRSCVCKGCVPRSS
Trigger: GGAGCTACGAGGAACACATCCCTTACACACACATGAACGGAGGCAAGAAAAACGGGCGGATTCTGACCTTGCCTCGGTCCAATCCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 90 bp CTCATACTCACTCTGGTTGTGCTTCTGAGAATCTTCAGACTCGAATaGTGGAGACCAGGTCCTCGAGGGCAGCTTCAGCCCTTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LILTLVVLLRIFRLE*WRPGPRGQLQPFEA
Trigger: TGCCTCAAAGGGCTGAAGCTGCCCTCGAGGACCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGTGAGTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGTGATCATGATGAGTTaGGGGAAACTGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQVIMMS*GKLRSR
Trigger: CCGAGACCTCAGTTTCCCCAAACTCATCATGATCAC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCGCGAGTTCTTGCATTaGTGGTGCAGGTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRREFLH*WCRSWQ
Trigger: CTGCCAGGACCTGCACCACAAATGCAAGAACTCGCG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTTGCCTCCTCGAATGTaGATGATCAGACTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQLPPRM*MIRLPL
Trigger: CAACGGGAGTCTGATCATCAACATTCGAGGAGGCAA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GCAGCTTCCGGGAGTTCAGTACTGAGGACCGTCAGATGCTCTCAGGGTGGAGGGGAAACTTCTTCCATCTaGTGGATTTCTGACAAGCAG +
Preference number: 5 (lower is better)
Translates to: AASGSSVLRTVRCSQGGGETSSI*WISDKQ
Trigger: CTGCTTGTCAGAAATCCACAAGATGGAAGAAGTTTC...CCCTCCACCCTGAGAGCATCTGACGGTCCTCAGTACTGAACTCCCGGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGGATGCCTGGTCCCCATaGGTCTTCAGGGCAATGTCG +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRDAWSP*VFRAMS
Trigger: CGACATTGCCCTGAAGACCAATGGGGACCAGGCATC...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGACCACCGTCCAACTGTaGGAACCACACGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRTTVQL*EPHASC
Trigger: GCAGGATGCGTGTGGTTCCAACAGTTGGACGGTGGT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTGTGATTTGGGGTCGTaGGACCTCAGGGGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFCDLGS*DLRGGS
Trigger: TGACCCACCCCTGAGGTCCAACGACCCCAAATCACA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTGAATGGGTGGTTCTGTGATTaGGGGTCGTTGGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: LRVTLLVAALTGGSGYLNGWFCD*GSLDLR
Trigger: CCTGAGGTCCAACGACCCCAAATCACAGAACCACCC...ATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCTGGTCGAGGAAGTGTaGGGGAAAGCTGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDLVEEV*GKAATV
Trigger: CACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCTGGTCGAGGAAGTGTaGGGGAAAGCTGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYLVEEV*GKAATV
Trigger: CACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAGCACGATCAGACCATaGGGCTCCTTCGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKSTIRP*GSFGSC
Trigger: GCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGCT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACAGACTGGCTGACTCGTaGACCGTCTTCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDRLADS*TVFTAT
Trigger: CGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTCT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTCGTCCTTGAGCAGGTaGACAATCTCCAGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQSSLSR*TISRKV
Trigger: AACCTTCCTGGAGATTGTCAACCTGCTCAAGGACGA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTCACTCTCGGGAGCCTaGTTCTCCTCGCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFSLSGA*FSSLWK
Trigger: CTTCCACAGCGAGGAGAACAAGGCTCCCGAGAGTGA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCAATATTCACCTTCCATaGCACTCCCTGAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATNIHLP*HSLKVH
Trigger: GTGGACTTTCAGGGAGTGCAATGGAAGGTGAATATT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp GGCTCCTGCCACATCAAGTGGACGACGTTGTTCTCAAAGATTTCATaGGTCACAGGGCCAACAATGTCATCAGCCTTGGCTTCAGGCATG +
Preference number: 5 (lower is better)
Translates to: GSCHIKWTTLFSKIS*VTGPTMSSALASGM
Trigger: CATGCCTGAAGCCAAGGCTGATGACATTGTTGGCCCTGTGACGCATGAAATCTTTGAGAACAACGTCGTCCACTTGATGTGGCAGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CCA 90 bp GATGCCTGGTCCCCATTGGTCTTCAGGGCAATGTCGTTTCTCTCCTaGCGCCCCTTGGTTCCTGAAACTTCTTCCATCTTGTGGATTTCT +
Preference number: 5 (lower is better)
Translates to: DAWSPLVFRAMSFLS*RPLVPETSSILWIS
Trigger: AGAAATCCACAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACATTGCCCTGAAGACCAATGGGGACCAGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 90 bp CACCATATCGCCGATAACTCACTTCATACAGCACGATCAGACCATTaGGCTCCTTCGGCTCCTGCCACATCAAGTGGACGACGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: HHIADNSLHTARSDH*APSAPATSSGRRCS
Trigger: AGAACAACGTCGTCCACTTGATGTGGCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGCTGTATGAAGTGAGTTATCGGCGATATGGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CCA 90 bp AAAAAGGAAGCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTaGTTCTGGTTACTTGAATGCAGGGCCAACAGCTTACAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: KKEASSDITGGSSHG*FWLLECRANSLQRS
Trigger: GCTCCGCTGTAAGCTGTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGCTTCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGACGCGAGTTCTTGCATTaGTGGTGCAGGTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRREFLH*WCRSWQ
Trigger: CTGCCAGGACCTGCACCACAAATGCAAGAACTCGCG...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTGCCTCCGCGAGTTCTaGCATTTGTGGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDCLREF*HLWCRS
Trigger: GGACCTGCACCACAAATGCAAGAACTCGCGGAGGCA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATCAATGAGGCCGAGGTaGGCTTCTAGCTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKSMRPR*ASSSAA
Trigger: GGCAGCTGAGCTAGAAGCCAACCTCGGCCTCATTGA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGATGGTGAGGTTGTGTTaGCTCCAGTCCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRMVRLC*LQSQSC
Trigger: GCAGCTCTGGGACTGGAGCAAACACAACCTCACCAT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCGAAACTTCTTCCATCTaGTGGATTTCTGACAAGCAG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATETSSI*WISDKQ
Trigger: CTGCTTGTCAGAAATCCACAAGATGGAAGAAGTTTC...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAACCACCGTCCAACTGTaGGAACCACACGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKTTVQL*EPHASC
Trigger: GCAGGATGCGTGTGGTTCCAACAGTTGGACGGTGGT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATGTGATTTGGGGTCGTaGGACCTCAGGGGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKCDLGS*DLRGGS
Trigger: TGACCCACCCCTGAGGTCCAACGACCCCAAATCACA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTGGGTGATGTTGCCATaGGGGTCGGAGGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDWVMLP*GSEGGF
Trigger: GAAACCACCCTCCGACCCCAATGGCAACATCACCCA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGATGACCAGCGACTCCTaGTTCACCACCTTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQMTSDS*FTTFSK
Trigger: TTTTGAGAAGGTGGTGAACAAGGAGTCGCTGGTCAT...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCATCAAGTGGACGACGTaGTTCTCAAAGATTTCATGC +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATIKWTT*FSKISC
Trigger: GCATGAAATCTTTGAGAACAACGTCGTCCACTTGAT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGTCTCTGCCTCACCCTaGATGATGTCCCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFVSASP*MMSLAL
Trigger: CAATGCCAGGGACATCATCAAGGGTGAGGCAGAGAC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAGGGTGCAGGTCGTCCTaGAGCAGGTTGACAATCTCC +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKGCRSS*SRLTIS
Trigger: GGAGATTGTCAACCTGCTCAAGGACGACCTGCACCC...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGGGTGCAGGTCGTCCTaGAGCAGGTTGACAATCTCC +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYGCRSS*SRLTIS
Trigger: GGAGATTGTCAACCTGCTCAAGGACGACCTGCACCC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGCTGTACTCTTGCTTCTaGTACCCAATCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQLYSCF*YPITEA
Trigger: AGCCTCAGTGATTGGGTACAAGAAGCAAGAGTACAG...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATAATCAAAGCCCGTCTTaGCCCCGGCAGCCATCTCTC +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYNQSPS*PRQPSL
Trigger: GAGAGATGGCTGCCGGGGCAAAGACGGGCTTTGATT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATACATTTGATCCTGCGTaGCCAACGCACAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYTFDPA*PTHRAE
Trigger: CTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp AGTATCTGCAAGTGTCCTTCGATGACAGAGCAATTCTCCAGCTCATaGAACCTAGTGAGGTTGTTCCGGATATCCATGCCGGGACACACC +
Preference number: 5 (lower is better)
Translates to: SICKCPSMTEQFSSS*NLVRLFRISMPGHT
Trigger: GGTGTGTCCCGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTGGAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 90 bp ATACTCACTCTGGTTGTGCTTCTGAGAATCTTCAGACTCGAATGGTaGAGACCAGGTCCTCGAGGGCAGCTTCAGCCCTTTGAGGCAATA +
Preference number: 5 (lower is better)
Translates to: ILTLVVLLRIFRLEW*RPGPRGQLQPFEAI
Trigger: TATTGCCTCAAAGGGCTGAAGCTGCCCTCGAGGACCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACATGATCAGACTCCCGTaGATGACGGTGCATCCTCGG +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDMIRLP*MTVHPR
Trigger: CCGAGGATGCACCGTCATCAACGGGAGTCTGATCAT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTCTGAGAGTCTGTCTTaGGACAGGAGCAGCATTCGC +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRSESLS*DRSSIR
Trigger: GCGAATGCTGCTCCTGTCCAAAGACAGACTCTCAGA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAGACTGGCTGACTCGTaGACCGTCTTCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHRLADS*TVFTAT
Trigger: CGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTCT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCATCTGAATCATCTCTaGAAGGGTAGGGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYHLNHL*KGRGRA
Trigger: CGCCCTCCCCCTACCCTTCAAGAGATGATTCAGATG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCATCCGCCCGTTTTTCTaGCCTCCGTTCATGTGTGTG +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFIRPFF*PPFMCV
Trigger: CACACACATGAACGGAGGCAAGAAAAACGGGCGGAT...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAAAGCTGCAGCACATTTGATCCTGCGTTGCCAACGCACAGGGCCGAGGCCACCATGGGCGATGATTTTTaGATGAACCAAAGTGATGAG +
Preference number: 5 (lower is better)
Translates to: KSCSTFDPALPTHRAEATMGDDF*MNQSDE
Trigger: CTCATCACTTTGGTTCATCAAAAAATCATCGCCCAT...GGTGGCCTCGGCCCTGTGCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 90 bp GAGCGTAGGATCGGCGGATTTTTAGATACCCTGAAATTTCTTCAATaGGGCCGAGGTTGGCTTCTAGCTCAGCTGCCAGATTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: ERRIGGFLDTLKFLQ*GRGWLLAQLPDCCL
Trigger: GAGGCAACAATCTGGCAGCTGAGCTAGAAGCCAACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGATCCTACGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGGTGATCATGATGAGTTaGGGGAAACTGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRVIMMS*GKLRSR
Trigger: CCGAGACCTCAGTTTCCCCAAACTCATCATGATCAC...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATGGGGTGCACAGCAAGTaGCTGGAATTCATCGTGTAC +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYGVHSK*LEFIVY
Trigger: GTACACGATGAATTCCAGCAACTTGCTGTGCACCCC...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGTCAGCTGCCAGATTGTaGCCTCCTCGAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRSAARL*PPRMLM
Trigger: CATCAACATTCGAGGAGGCAACAATCTGGCAGCTGA...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACAAGGTTGGCCTCATCTaGGGGTTGAATTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDKVGLI*GLNCQH
Trigger: GTGCTGGCAATTCAACCCCAAGATGAGGCCAACCTT...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCTCCGCATGGATACTTaGCACACACATCAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDLRMDT*HTHQPC
Trigger: ACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACGATGAGCTCGCACCCTaGAGAAGAACCTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDDELAP*RRTFMS
Trigger: GCTCATGAAGGTTCTTCTCAAGGGTGCGAGCTCATC...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGATGAGCTCGCACCCTaGAGAAGAACCTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRDELAP*RRTFMS
Trigger: GCTCATGAAGGTTCTTCTCAAGGGTGCGAGCTCATC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTCCAATAATATCAGCTaGAGGTCAGTCAAACCCCAA +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQSNNIS*RSVKPQ
Trigger: TTGGGGTTTGACTGACCTCAAGCTGATATTATTGGA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAAAGCTGCAGCACATTaGATCCTGCGTTGCCAACGC +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKKAAAH*ILRCQR
Trigger: GCGTTGGCAACGCAGGATCAAATGTGCTGCAGCTTT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTCTTCGGGCCTCGTTTaGAACATCAAGAGTATCTGC +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFSSGLV*NIKSIC
Trigger: GCAGATACTCTTGATGTTCAAAACGAGGCCCGAAGA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAGCACGATCAGACCATaGGGCTCCTTCGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHSTIRP*GSFGSC
Trigger: GCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGCT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGTCTCTGCCTCACCCTaGATGATGTCCCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHVSASP*MMSLAL
Trigger: CAATGCCAGGGACATCATCAAGGGTGAGGCAGAGAC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGACACAAAATCCTGGTTaGAAACCGTCGTTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRTQNPG*KPSLPQ
Trigger: TTGGGGCAACGACGGTTTCAAACCAGGATTTTGTGT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGGATAGCAATAGACAATaGGGATTCATGTCTACCTGT +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQDSNRQ*GFMSTC
Trigger: ACAGGTAGACATGAATCCCAATTGTCTATTGCTATC...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAAAAAGGAAGGTACACCTaGCTGGGTTACCCCATATAT +
Preference number: 5 (lower is better)
Translates to: VRMFTPGRGNATRGTHREKGRYT*LGYPIY
Trigger: ATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTT...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATGGAACAGGTGGGAATGCTTGCTCTGAATCAAAGCCCGTCTTTGCCCCGGCAGTTAATGGGTTTTGGATaGGAATTTCCCTCACATGCT +
Preference number: 5 (lower is better)
Translates to: MEQVGMLALNQSPSLPRQLMGFG*EFPSHA
Trigger: AGCATGTGAGGGAAATTCCAATCCAAAACCCATTAA...CTGCCGGGGCAAAGACGGGCTTTGATTCAGAGCAAGCATTCCCACCTGTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCAAGAGCAGCAAGATTaGGGCCCCACTGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHQEQQD*GPTGPA
Trigger: GGCAGGACCAGTGGGGCCCAAATCTTGCTGCTCTTG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp AGGTCTCGGAAATCTTCGGGCCTCGTTTTGAACATCAAGAGTATCTaGAAGTGTCCTTCGATGACAGAGCAATTCTCCAGCTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: RSRKSSGLVLNIKSI*KCPSMTEQFSSSCN
Trigger: GTTGCATGAGCTGGAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAAAACGAGGCCCGAAGATTTCCGAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTCTTCGGGCCTCGTTTaGAACATCAAGAGTATCTGC +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYSSGLV*NIKSIC
Trigger: GCAGATACTCTTGATGTTCAAAACGAGGCCCGAAGA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATTCTCCACACTCCTCGTaGTCATCTTTGTTCAACACG +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYSPHSS*SSLFNT
Trigger: CGTGTTGAACAAAGATGACAACGAGGAGTGTGGAGA...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTGCCTCCGCGAGTTCTaGCATTTGTGGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHCLREF*HLWCRS
Trigger: GGACCTGCACCACAAATGCAAGAACTCGCGGAGGCA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATACAATGTCATCAGCCTaGGCTTCAGGCATGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHTMSSA*ASGMVL
Trigger: GAGGACCATGCCTGAAGCCAAGGCTGATGACATTGT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATATGACCGAGGCCTCATaGAGGAACTCAATCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHMTEAS*RNSIRS
Trigger: AGAGCGGATTGAGTTCCTCAATGAGGCCTCGGTCAT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACTTCATTAGACAGGCCTaGGTAAGGCTGTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDFIRQA*VRLFCQ
Trigger: TTGGCAGAACAGCCTTACCAAGGCCTGTCTAATGAA...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATTCATTAGACAGGCCTaGGTAAGGCTGTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKFIRQA*VRLFCQ
Trigger: TTGGCAGAACAGCCTTACCAAGGCCTGTCTAATGAA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATGGGATCTGACGTTCTaGGGTTTGCACAATAACGGT +
Preference number: 5 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRWDLTF*GLHNNG
Trigger: ACCGTTATTGTGCAAACCCAAGAACGTCAGATCCCA...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATCCAGGTTGTTGTGCTTaGGGATCTGACGTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHPGCCA*GSDVLG
Trigger: CCCAAGAACGTCAGATCCCAAAGCACAACAACCTGG...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCCCATTCGGAAGTTCTaGGTGGTGTGTAAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYPIRKF*VVCKVF
Trigger: AAAGACCTTACACACCACCAAGAACTTCCGAATGGG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCGTTCTTAATCAAGAATaGAGAGGGCTTGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFVLNQE*RGLGGC
Trigger: GCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAAC...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCTGTACTCTTGCTTCTaGTACCCAATCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDLYSCF*YPITEA
Trigger: AGCCTCAGTGATTGGGTACAAGAAGCAAGAGTACAG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGAAAGGAAGGTACACCTaGCTGGGTTACCCCATATAT +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRKGRYT*LGYPIY
Trigger: ATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTT...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AAGCATCAACTCCGCATGGATACTTTGCACACACATCAGCCGTGTCTAATGGACCAACCCAATAGCTGTTaGCTCTTTTCACTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KHQLRMDTLHTHQPCLMDQPNSC*LFSLWQ
Trigger: CTGCCACAGTGAAAAGAGCAAACAGCTATTGGGTTG...GTCCATTAGACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAGTTGATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGAGAGAAAGTGATGTGCTaGGTATTCTCCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIREKVMC*VFSSWK
Trigger: CTTCCAGGAGGAGAATACCAAGCACATCACTTTCTC...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTTAGGATGTTCACACCCGGGAGAGGAAACGCCACAAGAGGTACACACAGAGAATCCTCAACAAAACCATaGTTTCTGAAGAGCCTAAGG +
Preference number: 5 (lower is better)
Translates to: VRMFTPGRGNATRGTHRESSTKP*FLKSLR
Trigger: CCTTAGGCTCTTCAGAAACAATGGTTTTGTTGAGGA...TTCTCTGTGTGTACCTCTTGTGGCGTTTCCTCTCCCGGGTGTGAACATCCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTTGCCTCCTCGAATGTaGATGATCAGACTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHLPPRM*MIRLPL
Trigger: CAACGGGAGTCTGATCATCAACATTCGAGGAGGCAA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATATGGTGAGGTTGTGTTaGCTCCAGTCCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHMVRLC*LQSQSC
Trigger: GCAGCTCTGGGACTGGAGCAAACACAACCTCACCAT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GTGGATTCACGCCCATTCGGAAGTTCTTGGTGGTGTGTAAGGTCTTTTTCACGGCACCTCTCTCTTACATaGCTTAGATGTTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: VDSRPFGSSWWCVRSFSRHLSLT*LRCSQS
Trigger: ACTTTGGGAACATCTAAGCAATGTAAGAGAGAGGTG...CCGTGAAAAAGACCTTACACACCACCAAGAACTTCCGAATGGGCGTGAATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATATCAAGTGGACGACGTaGTTCTCAAAGATTTCATGC +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYIKWTT*FSKISC
Trigger: GCATGAAATCTTTGAGAACAACGTCGTCCACTTGAT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATAAGGTTGGCCTCATCTaGGGGTTGAATTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHKVGLI*GLNCQH
Trigger: GTGCTGGCAATTCAACCCCAAGATGAGGCCAACCTT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATCTCCGCATGGATACTTaGCACACACATCAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHLRMDT*HTHQPC
Trigger: ACACGGCTGATGTGTGTGCAAAGTATCCATGCGGAG...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATCACCTCTCTCTTACATaGCTTAGATGTTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYHLSLT*LRCSQS
Trigger: ACTTTGGGAACATCTAAGCAATGTAAGAGAGAGGTG...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATAGTTCACTGTGTTCTTaGAGCAGCTGTGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHSSLCS*SSCGGS
Trigger: AGAACCACCACAGCTGCTCAAAGAACACAGTGAACT...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTAATGGGTTTTGGATaGGAATTTCCCTCACATGCT +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFLMGFG*EFPSHA
Trigger: AGCATGTGAGGGAAATTCCAATCCAAAACCCATTAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATCCAATAATATCAGCTaGAGGTCAGTCAAACCCCAA +
Preference number: 5 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRSNNIS*RSVKPQ
Trigger: TTGGGGTTTGACTGACCTCAAGCTGATATTATTGGA...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TTAGCACTGGGACTACAGCACATCCATTTACCGGATGACCAGCGCAAGTCATATAATGTCAAAGGAGGTTaGCAACCCAATAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LALGLQHIHLPDDQRKSYNVKGG*QPNSCL
Trigger: CAAACAGCTATTGGGTTGCAAACCTCCTTTGACATT...ATATGACTTGCGCTGGTCATCCGGTAAATGGATGTGCTGTAGTCCCAGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAAAATGTCAAAGGAGGTTaGCAACCCAATAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKNVKGG*QPNSCL
Trigger: CAAACAGCTATTGGGTTGCAAACCTCCTTTGACATT...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp CCACAGCTTCTCTCAATCATCCTCAGCCTATATCCAGACAAGCAGCAGTGCTTCTTTTCTGATGCGTATTaGACATCACTGATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: PQLLSIILSLYPDKQQCFFSDAY*TSLMQR
Trigger: TCTCTGCATCAGTGATGTCAAATACGCATCAGAAAA...GAAGCACTGCTGCTTGTCTGGATATAGGCTGAGGATGATTGAGAGAAGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATGACCTATGCAGACCCTaGTGTCAGTTCCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHDLCRP*CQFPQL
Trigger: AAGCTGTGGGAACTGACACAAGGGTCTGCATAGGTC...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp ATCAGCTTGAGGTCAGTCAAACCCCAACACAGAGGTCCAAGGTGTTGTTGCAAATCCTCAACAAAACCATaGTTTCTGAAGAGCCTAAGG +
Preference number: 5 (lower is better)
Translates to: ISLRSVKPQHRGPRCCCKSSTKP*FLKSLR
Trigger: CCTTAGGCTCTTCAGAAACAATGGTTTTGTTGAGGA...TTTGCAACAACACCTTGGACCTCTGTGTTGGGGTTTGACTGACCTCAAGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp AGCCATCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATGTACATGGTGCTACTaGGCTCTTGTAGGAAAACAT +
Preference number: 5 (lower is better)
Translates to: SHLSPKEGTPCWVTPYIRCTWCY*ALVGKH
Trigger: ATGTTTTCCTACAAGAGCCAAGTAGCACCATGTACA...TCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 90 bp GATTATTTGCTCTTCCTGATAAAATTCCCCTCGAAATTTCGAAACTaGAAGATCTCTTCCTCCACCCAGGAAAGGGCTCCATTCAGACTC +
Preference number: 5 (lower is better)
Translates to: DYLLFLIKFPSKFRN*KISSSTQERAPFRL
Trigger: GAGTCTGAATGGAGCCCTTTCCTGGGTGGAGGAAGAGATCTTGCAGTTTCGAAATTTCGAGGGGAATTTTATCAGGAAGAGCAAATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598216.1
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATTCGTCCTTGAGCAGGTaGACAATCTCCAGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHSSLSR*TISRKV
Trigger: AACCTTCCTGGAGATTGTCAACCTGCTCAAGGACGA...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGCAGGACTAGTTAAATaGGTAACCAAACGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHAGLVK*VTKRVH
Trigger: GTGGACTCGTTTGGTTACCAATTTAACTAGTCCTGC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATGTTCTTAATCAAGAATaGAGAGGGCTTGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHVLNQE*RGLGGC
Trigger: GCAACCTCCAAGCCCTCTCAATTCTTGATTAAGAAC...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp TCTCTCACCAAAGGAAGGTACACCTTGCTGGGTTACCCCATATATCAGATACATTTTTCTGATGCGTATTaGACATCACTGATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SLTKGRYTLLGYPIYQIHFSDAY*TSLMQR
Trigger: TCTCTGCATCAGTGATGTCAAATACGCATCAGAAAA...ATGTATCTGATATATGGGGTAACCCAGCAAGGTGTACCTTCCTTTGGTGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS-3UTR CAA 90 bp GATTGGAATTTCCCTCACATGCTCCCATCCCACTTGGAGAATTTAAAAAGACATATGGGCGATGATTTTTaGATGAACCAAAGTGATGAG +
Preference number: 5 (lower is better)
Translates to: DWNFPHMLPSHLENLKRHMGDDF*MNQSDE
Trigger: CTCATCACTTTGGTTCATCAAAAAATCATCGCCCAT...ATGTCTTTTTAAATTCTCCAAGTGGGATGGGAGCATGTGAGGGAAATTCCAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 72 bp CGGATCAGAGCGCGCGGCGCTGGCCCGCGGGGGTCATaGTCCGAGGCGGCCACCCAAGAGGCGCTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: RIRARGAGPRGS*SEAATQEALGA
Trigger: GGCCCCCAGCGCCTCTTGGGTGGCCGCCTCGGAGCATGACCCCCGCGGGCCAGCGCCGCGCGCTCTGATCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS CCA 72 bp GGACAGAGGGACGCGCGGACCGACGGACTAGCTGACTaGCGGGCGGGCACCTGGGCTGGCGGGTGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GQRDARTDGLAD*RAGTWAGGWRA
Trigger: CGCCCGCCACCCGCCAGCCCAGGTGCCCGCCCGCCAGTCAGCTAGTCCGTCGGTCCGCGCGTCCCTCTGTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS TCA 72 bp TCCGGGACAGAGGGACGCGCGGACCGACGGACTAGCTaGCTGGCGGGCGGGCACCTGGGCTGGCGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SGTEGRADRRTS*LAGGHLGWRVA
Trigger: CGCCACCCGCCAGCCCAGGTGCCCGCCCGCCAGTCAGCTAGTCCGTCGGTCCGCGCGTCCCTCTGTCCCGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS CCA 72 bp CCGGGACTGTCTCTCGGCTCTCGGCCCCGCGCGCTCTaGGTCGCGATCTGCGGGCTCCGGGACAGAGGGACG +
Preference number: 6 (lower is better)
Translates to: PGLSLGSRPRAL*VAICGLRDRGT
Trigger: CGTCCCTCTGTCCCGGAGCCCGCAGATCGCGACCCAGAGCGCGCGGGGCCGAGAGCCGAGAGACAGTCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS CCA 72 bp GGGGGTCATGCTCCGAGGCGGCCACCCAAGAGGCGCTaGGGGCCGCGCGTCCTTCTCTTCCACGCCCGCGAC +
Preference number: 6 (lower is better)
Translates to: GGHAPRRPPKRR*GPRVLLFHARD
Trigger: GTCGCGGGCGTGGAAGAGAAGGACGCGCGGCCCCCAGCGCCTCTTGGGTGGCCGCCTCGGAGCATGACCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS TCA 72 bp GGGAAGGGCGCGCGCGGCTTCGCCAGCTACAAATACTaGGCGGAGGCCCTTGCGGTGGTGGCCCCGACCCCC +
Preference number: 6 (lower is better)
Translates to: GKGARGFASYKY*AEALAVVAPTP
Trigger: GGGGGTCGGGGCCACCACCGCAAGGGCCTCCGCTCAGTATTTGTAGCTGGCGAAGCCGCGCGCGCCCTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302850.10
CDS CCA 72 bp ATATCCATGCCGGGACACACCTCTCCGGGGTACAGGTaGCCCGCGGCGCCCAGTAGCAGCGCGGCCACCGCC +
Preference number: 6 (lower is better)
Translates to: ISMPGHTSPGYR*PAAPSSSAATA
Trigger: GGCGGTGGCCGCGCTGCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGAGGTGTGTCCCGGCATGGATAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 72 bp GGAGGTGGCCCGGATTCGCACGCTGTAGTTCCCCGGTaGCAGCCCACGCAGCCTGCAGCCCCGTTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: GGGPDSHAVVPR*QPTQPAAPFQS
Trigger: GCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGCGTGCGAATCCGGGCCACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 72 bp GGCAGGTCTCCACACACCTGCCGTCCAGGTAGAAGTTaGGGCAGGCCACGCACTTGGTGGGGTCGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: GRSPHTCRPGRS*GRPRTWWGRRA
Trigger: AGCCCGACGACCCCACCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp GCACGCTGTAGTTCCCCGGTGACAGCCCACGCAGCCTaGAGCCCCGTTCCAGAGCGAAGTGCTTGCGGGAGA +
Preference number: 6 (lower is better)
Translates to: ARCSSPVTAHAA*SPVPERSACGR
Trigger: TCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 72 bp GGTCTCCGTGAGCCATCAGCTCCATCACCACCAGCGTaGGCTGGCCCTTGGACACCACTCCCAGGAGGCGCA +
Preference number: 6 (lower is better)
Translates to: GLREPSAPSPPA*AGPWTPLPGGA
Trigger: TGCGCCTCCTGGGAGTGGTGTCCAAGGGCCAGCCCACGCTGGTGGTGATGGAGCTGATGGCTCACGGAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000593970.1
ENST00000601099.1
CDS TCA 72 bp TTGCGGCAGGCCACGCACTTGGTGGGGTCGTCGGGCTaGGAACAGTTGCCCAGGCACTCGCTGTGGCAACAG +
Preference number: 6 (lower is better)
Translates to: LRQATHLVGSSG*EQLPRHSLWQQ
Trigger: CTGTTGCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCCGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp AGTGGTAGTACGGGGGCGGGCAGGTCTCCACACACCTaGCGTCCAGGTAGAAGTTGCGGCAGGCCACGCACT +
Preference number: 6 (lower is better)
Translates to: SGSTGAGRSPHT*RPGRSCGRPRT
Trigger: AGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGACCTGCCCGCCCCCGTACTACCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp AGCCCACGCAGCCTGCAGCCCCGTTCCAGAGCGAAGTaGTTGCGGGAGACGCAGAGATGCAGCTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: SPRSLQPRSRAK*LRETQRCSSSS
Trigger: TGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 72 bp CGTCCAGGTAGAAGTTGCGGCAGGCCACGCACTTGGTaGGGTCGTCGGGCTGAGAACAGTTGCCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: RPGRSCGRPRTW*GRRAENSCPGT
Trigger: AGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACCAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 72 bp CAAAAGGCCTGTGCTCCTCCGGACTCGTGGGCACGCTaGTCGAGGAAGTGTTGGGGAAAGCTGCCACCGTGG +
Preference number: 6 (lower is better)
Translates to: QKACAPPDSWAR*SRKCWGKLPPW
Trigger: CCACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACAGGCCTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CCA 72 bp CAGCACCCTGTGGCCTGGATGCAGCGTGCTCAGCCCTaGTCTAGGAGAGCAGACATACCTGCCCGGACAGCA +
Preference number: 6 (lower is better)
Translates to: QHPVAWMQRAQP*SRRADIPARTA
Trigger: TGCTGTCCGGGCAGGTATGTCTGCTCTCCTAGACCAGGGCTGAGCACGCTGCATCCAGGCCACAGGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CAA 72 bp CCACGCAGCCTGCAGCCCCGTTCCAGAGCGAAGTGCTaGCGGGAGACGCAGAGATGCAGCTCCTCATCACCA +
Preference number: 6 (lower is better)
Translates to: PRSLQPRSRAKC*RETQRCSSSSP
Trigger: TGGTGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CAA 90 bp GGTGACAGCCCACGCAGCCTGCAGCCCCGTTCCAGAGCGAAGTGCTaGCGGGAGACGCAGAGATGCAGCTCCTCATCACCATATCGCCGA +
Preference number: 6 (lower is better)
Translates to: GDSPRSLQPRSRAKC*RETQRCSSSSPYRR
Trigger: TCGGCGATATGGTGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 72 bp GGAACTCAATCCGCTCTCGGAGACTGGCTGACTCGTTaGCCGTCTTCACCGCCACGCGGGTCTCTGCCTCAC +
Preference number: 6 (lower is better)
Translates to: GTQSALGDWLTR*PSSPPRGSLPH
Trigger: GTGAGGCAGAGACCCGCGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTCTCCGAGAGCGGATTGAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 72 bp CACGCAGCCTGCAGCCCCGTTCCAGAGCGAAGTGCTTaGGGGAGACGCAGAGATGCAGCTCCTCATCACCAT +
Preference number: 6 (lower is better)
Translates to: HAACSPVPERSA*GRRRDAAPHHH
Trigger: ATGGTGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 72 bp GTCACCGAGTCGATGGTCTTCTCGCCTTCTAGGAGGTaGCACACCTTGGGACAGGGACCCAGGCATGGGGTG +
Preference number: 6 (lower is better)
Translates to: VTESMVFSPSRR*HTLGQGPRHGV
Trigger: CACCCCATGCCTGGGTCCCTGTCCCAAGGTGTGCCACCTCCTAGAAGGCGAGAAGACCATCGACTCGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp AACTGCCCGTTGATGACGGTGGCGGGGCAGTTGGTCTaGCCCTTCGCGGTACCCGGACAGATGTCTCCACAC +
Preference number: 6 (lower is better)
Translates to: NCPLMTVAGQLV*PFAVPGQMSPH
Trigger: GTGTGGAGACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTCATCAACGGGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 90 bp CGTTCGACAAACTGCCCGTTGATGACGGTGGCGGGGCAGTTGGTCTaGCCCTTCGCGGTACCCGGACAGATGTCTCCACACTCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: RSTNCPLMTVAGQLV*PFAVPGQMSPHSSL
Trigger: CAACGAGGAGTGTGGAGACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTCATCAACGGGCAGTTTGTCGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 72 bp TGTCATCAGCCTTGGCTTCAGGCATGGTCCTCGCACTaGCGTAGGCTGCCACACTGCACCGTTCCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: CHQPWLQAWSSH*RRLPHCTVPQG
Trigger: CCCCTGAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGCCTGAAGCCAAGGCTGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS GCA 72 bp CCAGGCACTCGCTGTGGCAACAGAGGCCTTCGGCGGTaGAGCCGTGTGACTTACAGATGGTCGGGCAAACTT +
Preference number: 6 (lower is better)
Translates to: PGTRCGNRGLRR*SRVTYRWSGKL
Trigger: AAGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCTGTTGCCACAGCGAGTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp CTTGGCTTCAGGCATGGTCCTCGCACTGACGTAGGCTaGCACACTGCACCGTTCCTCAGGGGTGTCCTGGTT +
Preference number: 6 (lower is better)
Translates to: LGFRHGPRTDVG*HTAPFLRGVLV
Trigger: AACCAGGACACCCCTGAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGCCTGAAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS GCA 72 bp TCACGTAGAAATAGGTGGGTTCCGTCCAAGAGCCGTTaGCCGCAAGGGAGGTGGCCCGGATTCGCACGCTGT +
Preference number: 6 (lower is better)
Translates to: SRRNRWVPSKSR*PQGRWPGFARC
Trigger: ACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGGAACCCACCTATTTCTACGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS GCA 72 bp CGGCCACCGTCACATTCCCAACATCGCCAAGGGACCTaGGTTTCCGAGATGGCCTGGGGACGAAAACCACGT +
Preference number: 6 (lower is better)
Translates to: RPPSHSQHRQGT*VSEMAWGRKPR
Trigger: ACGTGGTTTTCGTCCCCAGGCCATCTCGGAAACGCAGGTCCCTTGGCGATGTTGGGAATGTGACGGTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341500.9
CDS CCA 72 bp ATCCTCGGAGCTCCTGGGCAGACGTCACCGAGTCGATaGTCTTCTCGCCTTCTAGGAGGTGGCACACCTTGG +
Preference number: 6 (lower is better)
Translates to: ILGAPGQTSPSR*SSRLLGGGTPW
Trigger: CCAAGGTGTGCCACCTCCTAGAAGGCGAGAAGACCATCGACTCGGTGACGTCTGCCCAGGAGCTCCGAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 72 bp AGACTCCCGTTGATGACGGTGCATCCTCGGAGCTCCTaGGCAGACGTCACCGAGTCGATGGTCTTCTCGCCT +
Preference number: 6 (lower is better)
Translates to: RLPLMTVHPRSS*ADVTESMVFSP
Trigger: AGGCGAGAAGACCATCGACTCGGTGACGTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 72 bp CCCGCCCCCGCCACGGTAGGCACTGTTAGGAAGGATTaGACCGAGGCAAGGTCAGAATCCGCCCGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: PAPATVGTVRKD*TEARSESARFS
Trigger: AGAAAAACGGGCGGATTCTGACCTTGCCTCGGTCCAATCCTTCCTAACAGTGCCTACCGTGGCGGGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 72 bp CCCTGGTGTCTATGTCACACACAGCACCCTGTGGCCTaGATGCAGCGTGCTCAGCCCTGGTCTAGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: PWCLCHTQHPVA*MQRAQPWSRRA
Trigger: TGCTCTCCTAGACCAGGGCTGAGCACGCTGCATCCAGGCCACAGGGTGCTGTGTGTGACATAGACACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CCA 72 bp TCCCTCCCTGGTGTCTATGTCACACACAGCACCCTGTaGCCTGGATGCAGCGTGCTCAGCCCTGGTCTAGGA +
Preference number: 6 (lower is better)
Translates to: SLPGVYVTHSTL*PGCSVLSPGLG
Trigger: TCCTAGACCAGGGCTGAGCACGCTGCATCCAGGCCACAGGGTGCTGTGTGTGACATAGACACCAGGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CAA 72 bp TCGACAAACTGCCCGTTGATGACGGTGGCGGGGCAGTaGGTCTTGCCCTTCGCGGTACCCGGACAGATGTCT +
Preference number: 6 (lower is better)
Translates to: STNCPLMTVAGQ*VLPFAVPGQMS
Trigger: AGACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTCATCAACGGGCAGTTTGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp AGGAACTCAATCCGCTCTCGGAGACTGGCTGACTCGTaGACCGTCTTCACCGCCACGCGGGTCTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: RNSIRSRRLADS*TVFTATRVSAS
Trigger: TGAGGCAGAGACCCGCGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTCTCCGAGAGCGGATTGAGTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CAA 90 bp CAACATCGTTCGACAAACTGCCCGTTGATGACGGTGGCGGGGCAGTaGGTCTTGCCCTTCGCGGTACCCGGACAGATGTCTCCACACTCC +
Preference number: 6 (lower is better)
Translates to: QHRSTNCPLMTVAGQ*VLPFAVPGQMSPHS
Trigger: GGAGTGTGGAGACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTCATCAACGGGCAGTTTGTCGAACGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 90 bp GACTCGTTGACCGTCTTCACCGCCACGCGGGTCTCTGCCTCACCCTaGATGATGTCCCTGGCATTGCCCTCATACACCATGCCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: DSLTVFTATRVSASP*MMSLALPSYTMPKE
Trigger: CTCCTTCGGCATGGTGTATGAGGGCAATGCCAGGGACATCATCAAGGGTGAGGCAGAGACCCGCGTGGCGGTGAAGACGGTCAACGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS TCA 72 bp GCTGTGGCAACAGAGGCCTTCGGCGGTGCAGCCGTGTaGCTTACAGATGGTCGGGCAAACTTTCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: AVATEAFGGAAV*LTDGRANFLAV
Trigger: CACTGCCAGAAAGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCTGTTGCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 72 bp TACCCGGAGGGACACTCAGGGATGCACTTGTTGTTGTaGATGACGTACTGGTGGCAGCCCTGCCTCCGCGAG +
Preference number: 6 (lower is better)
Translates to: YPEGHSGMHLLL*MTYWWQPCLRE
Trigger: CTCGCGGAGGCAGGGCTGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTCCGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 72 bp GGGTCTTCACAAAGATGGCATACTGGGTCCAGGGCTTaGGACCCCGCATCAGCCACCCTGGGTGGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: GSSQRWHTGSRA*DPASATLGGSV
Trigger: CACAGAACCACCCAGGGTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
ENST00000600492.1
CDS GCA 72 bp AGCGACTCCTTGTTCACCACCTTCTCAAAAGGCCTGTaGTCCTCCGGACTCGTGGGCACGCTGGTCGAGGAA +
Preference number: 6 (lower is better)
Translates to: SDSLFTTFSKGL*SSGLVGTLVEE
Trigger: TTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACAGGCCTTTTGAGAAGGTGGTGAACAAGGAGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS GCA 72 bp GGTGTCTATGTCACACACAGCACCCTGTGGCCTGGATaGAGCGTGCTCAGCCCTGGTCTAGGAGAGCAGACA +
Preference number: 6 (lower is better)
Translates to: GVYVTHSTLWPG*SVLSPGLGEQT
Trigger: TGTCTGCTCTCCTAGACCAGGGCTGAGCACGCTGCATCCAGGCCACAGGGTGCTGTGTGTGACATAGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CCA 72 bp GACCCCGCATCAGCCACCCTGGGTGGTTCTGTGATTTaGGGTCGTTGGACCTCAGGGGTGGGTCAATGTCTA +
Preference number: 6 (lower is better)
Translates to: DPASATLGGSVI*GRWTSGVGQCL
Trigger: TAGACATTGACCCACCCCTGAGGTCCAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
ENST00000600492.1
CDS CCA 72 bp TCCGTGATTCGACTCACCAGGGTTCTCCTCCCTCCCTaGTGTCTATGTCACACACAGCACCCTGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SVIRLTRVLLPP*CLCHTQHPVAW
Trigger: CCAGGCCACAGGGTGCTGTGTGTGACATAGACACCAGGGAGGGAGGAGAACCCTGGTGAGTCGAATCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CCA 72 bp AGGAGGCGCACCTGCAGAGCAAGCAACCAGGGTTCTTaGAGGAGGGTCCGTGATTCGACTCACCAGGGTTCT +
Preference number: 6 (lower is better)
Translates to: RRRTCRASNQGS*RRVRDSTHQGS
Trigger: AGAACCCTGGTGAGTCGAATCACGGACCCTCCTCCAAGAACCCTGGTTGCTTGCTCTGCAGGTGCGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601099.1
CDS CAA 72 bp ACCGTCTTCACCGCCACGCGGGTCTCTGCCTCACCCTaGATGATGTCCCTGGCATTGCCCTCATACACCATG +
Preference number: 6 (lower is better)
Translates to: TVFTATRVSASP*MMSLALPSYTM
Trigger: CATGGTGTATGAGGGCAATGCCAGGGACATCATCAAGGGTGAGGCAGAGACCCGCGTGGCGGTGAAGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CAA 90 bp GCTGCCAGATTGTTGCCTCCTCGAATGTTGATGATCAGACTCCCGTaGATGACGGTGCATCCTCGGAGCTCCTGGGCAGACGTCACCGAG +
Preference number: 6 (lower is better)
Translates to: AARLLPPRMLMIRLP*MTVHPRSSWADVTE
Trigger: CTCGGTGACGTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCTGATCATCAACATTCGAGGAGGCAACAATCTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 90 bp AAGGTGACCAGGGTCTTCACAAAGATGGCATACTGGGTCCAGGGCTaGAGACCCCGCATCAGCCACCCTGGGTGGTTCTGTGATTTGGGG +
Preference number: 6 (lower is better)
Translates to: KVTRVFTKMAYWVQG*RPRISHPGWFCDLG
Trigger: CCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
ENST00000600492.1
CDS TCA 72 bp CGGAGGGACACTCAGGGATGCACTTGTTGTTGTGAATaGCGTACTGGTGGCAGCCCTGCCTCCGCGAGTTCT +
Preference number: 6 (lower is better)
Translates to: RRDTQGCTCCCE*RTGGSPASASS
Trigger: AGAACTCGCGGAGGCAGGGCTGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 72 bp GGACCACGCCAAAGGACCACATGTCAGAAGAAGTGGTaGAGACCCCATCCTTCAGGGACTCCGGTGCCATCC +
Preference number: 6 (lower is better)
Translates to: GPRQRTTCQKKW*RPHPSGTPVPS
Trigger: GGATGGCACCGGAGTCCCTGAAGGATGGGGTCTTCACCACTTCTTCTGACATGTGGTCCTTTGGCGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 72 bp TGGTGGCAGCCCTGCCTCCGCGAGTTCTTGCATTTGTaGTGCAGGTCCTGGCAGAAGCTGAAGTTCACACAG +
Preference number: 6 (lower is better)
Translates to: WWQPCLREFLHL*CRSWQKLKFTQ
Trigger: CTGTGTGAACTTCAGCTTCTGCCAGGACCTGCACCACAAATGCAAGAACTCGCGGAGGCAGGGCTGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp ATCAGCCACCCTGGGTGGTTCTGTGATTTGGGGTCGTaGGACCTCAGGGGTGGGTCAATGTCTACCACCGTC +
Preference number: 6 (lower is better)
Translates to: ISHPGWFCDLGS*DLRGGSMSTTV
Trigger: GACGGTGGTAGACATTGACCCACCCCTGAGGTCCAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
ENST00000600492.1
CDS CAA 90 bp ACCTCTCGGTCCCTAAGTAATGACCTTCCACCAACACCAAGCCAATaGGCACCCACTAAGAGAGCCCAGCGCCAAGTCCTGACCTGGGGA +
Preference number: 6 (lower is better)
Translates to: TSRSLSNDLPPTPSQ*APTKRAQRQVLTWG
Trigger: TCCCCAGGTCAGGACTTGGCGCTGGGCTCTCTTAGTGGGTGCCAATTGGCTTGGTGTTGGTGGAAGGTCATTACTTAGGGACCGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598216.1
CDS CCA 72 bp AGAGGCCTTCGGCGGTGCAGCCGTGTGACTTACAGATaGTCGGGCAAACTTTCTGGCAGTGACTATGAGTCC +
Preference number: 6 (lower is better)
Translates to: RGLRRCSRVTYR*SGKLSGSDYES
Trigger: GGACTCATAGTCACTGCCAGAAAGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 72 bp GAAAAGGTGACCAGGGTCTTCACAAAGATGGCATACTaGGTCCAGGGCTTGAGACCCCGCATCAGCCACCCT +
Preference number: 6 (lower is better)
Translates to: EKVTRVFTKMAY*VQGLRPRISHP
Trigger: AGGGTGGCTGATGCGGGGTCTCAAGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
ENST00000600492.1
CDS CCA 72 bp GCACCCACTAAGAGAGCCCAGCGCCAAGTCCTGACCTaGGGACGAAAACCACGTTGTGCAGGTAATCCTCAA +
Preference number: 6 (lower is better)
Translates to: APTKRAQRQVLT*GRKPRCAGNPQ
Trigger: TTGAGGATTACCTGCACAACGTGGTTTTCGTCCCCAGGTCAGGACTTGGCGCTGGGCTCTCTTAGTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598216.1
CDS CAA 72 bp TACTGGTGGCAGCCCTGCCTCCGCGAGTTCTTGCATTaGTGGTGCAGGTCCTGGCAGAAGCTGAAGTTCACA +
Preference number: 6 (lower is better)
Translates to: YWWQPCLREFLH*WCRSWQKLKFT
Trigger: TGTGAACTTCAGCTTCTGCCAGGACCTGCACCACAAATGCAAGAACTCGCGGAGGCAGGGCTGCCACCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp GTGAAGTGTCGCAAGCCGGAGATGACCAGCGACTCCTaGTTCACCACCTTCTCAAAAGGCCTGTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: VKCRKPEMTSDS*FTTFSKGLCSS
Trigger: GGAGGAGCACAGGCCTTTTGAGAAGGTGGTGAACAAGGAGTCGCTGGTCATCTCCGGCTTGCGACACTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CAA 90 bp CCTTCGATGACAGAGCAATTCTCCAGCTCATGCAACCTAGTGAGGTaGTTCCGGATATCCATGCCGGGACACACCTCTCCGGGGTACAGG +
Preference number: 6 (lower is better)
Translates to: PSMTEQFSSSCNLVR*FRISMPGHTSPGYR
Trigger: CCTGTACCCCGGAGAGGTGTGTCCCGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTGGAGAATTGCTCTGTCATCGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 72 bp TCTTGGCCCCATAGGTCCGGCGTTCATCCGAAAAGGTaGCCAGGGTCTTCACAAAGATGGCATACTGGGTCC +
Preference number: 6 (lower is better)
Translates to: SWPHRSGVHPKR*PGSSQRWHTGS
Trigger: GGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTTTTCGGATGAACGCCGGACCTATGGGGCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
ENST00000600492.1
CDS TCA 72 bp TACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTTaGATGCAGGGCCAACAGCTTACAGCGGAGCTGATG +
Preference number: 6 (lower is better)
Translates to: YWWQLSRVVLVT*MQGQQLTAELM
Trigger: CATCAGCTCCGCTGTAAGCTGTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS TCA 72 bp AATTGGCACCCACTAAGAGAGCCCAGCGCCAAGTCCTaGCCTGGGGACGAAAACCACGTTGTGCAGGTAATC +
Preference number: 6 (lower is better)
Translates to: NWHPLREPSAKS*PGDENHVVQVI
Trigger: GATTACCTGCACAACGTGGTTTTCGTCCCCAGGTCAGGACTTGGCGCTGGGCTCTCTTAGTGGGTGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598216.1
CDS CCA 72 bp ACTCTGGTTGTGCTTCTGAGAATCTTCAGACTCGAATaGTGGAGACCAGGTCCTCGAGGGCAGCTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: TLVVLLRIFRLE*WRPGPRGQLQP
Trigger: GGGCTGAAGCTGCCCTCGAGGACCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp TTGTTGCCTCCTCGAATGTTGATGATCAGACTCCCGTaGATGACGGTGCATCCTCGGAGCTCCTGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: LLPPRMLMIRLP*MTVHPRSSWAD
Trigger: GTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCTGATCATCAACATTCGAGGAGGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 90 bp CGAGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTaGAATGCAGGGCCAACAGCTTACAGCGGAGCTGATGACTGGACT +
Preference number: 6 (lower is better)
Translates to: RVTLLVAALTGGSGY*NAGPTAYSGADDWT
Trigger: AGTCCAGTCATCAGCTCCGCTGTAAGCTGTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS TCA 72 bp GCACAGAGGGGTTGGTGGCATCTGTCTGGACATAAATaGTGTCACTCTTGGCCCCATAGGTCCGGCGTTCAT +
Preference number: 6 (lower is better)
Translates to: AQRGWWHLSGHK*CHSWPHRSGVH
Trigger: ATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGACAGATGCCACCAACCCCTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
ENST00000600492.1
CDS TCA 72 bp TGGAAACACATCACTGGCACTGAGATACTCAGGGTTTaGAGAAGCGTAAAGCGGTCCCAGCGGCCCATCTGG +
Preference number: 6 (lower is better)
Translates to: WKHITGTEILRV*RSVKRSQRPIW
Trigger: CCAGATGGGCCGCTGGGACCGCTTTACGCTTCTTCAAACCCTGAGTATCTCAGTGCCAGTGATGTGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 72 bp CTGGTTGTGCTTCTGAGAATCTTCAGACTCGAATGGTaGAGACCAGGTCCTCGAGGGCAGCTTCAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: LVVLLRIFRLEW*RPGPRGQLQPF
Trigger: AAAGGGCTGAAGCTGCCCTCGAGGACCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 72 bp GCCGATAACTCACTTCATACAGCACGATCAGACCATTaGGCTCCTTCGGCTCCTGCCACATCAAGTGGACGA +
Preference number: 6 (lower is better)
Translates to: ADNSLHTARSDH*APSAPATSSGR
Trigger: TCGTCCACTTGATGTGGCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGCTGTATGAAGTGAGTTATCGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CCA 72 bp AGTGACATTACTGGTGGCAGCTCTCACGGGTGGTTCTaGTTACTTGAATGCAGGGCCAACAGCTTACAGCGG +
Preference number: 6 (lower is better)
Translates to: SDITGGSSHGWF*LLECRANSLQR
Trigger: CCGCTGTAAGCTGTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS CAA 72 bp ACAGAGCAATTCTCCAGCTCATGCAACCTAGTGAGGTaGTTCCGGATATCCATGCCGGGACACACCTCTCCG +
Preference number: 6 (lower is better)
Translates to: TEQFSSSCNLVR*FRISMPGHTSP
Trigger: CGGAGAGGTGTGTCCCGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTGGAGAATTGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp GGCTCCTTCGGCTCCTGCCACATCAAGTGGACGACGTaGTTCTCAAAGATTTCATGCGTCACAGGGCCAACA +
Preference number: 6 (lower is better)
Translates to: GSFGSCHIKWTT*FSKISCVTGPT
Trigger: TGTTGGCCCTGTGACGCATGAAATCTTTGAGAACAACGTCGTCCACTTGATGTGGCAGGAGCCGAAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000597211.1
CDS CAA 72 bp TTACTGGTGGCAGCTCTCACGGGTGGTTCTGGTTACTaGAATGCAGGGCCAACAGCTTACAGCGGAGCTGAT +
Preference number: 6 (lower is better)
Translates to: LLVAALTGGSGY*NAGPTAYSGAD
Trigger: ATCAGCTCCGCTGTAAGCTGTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS TCA 72 bp CCGGCCGAATCCTCATACTCACTCTGGTTGTGCTTCTaGGAATCTTCAGACTCGAATGGTGGAGACCAGGTC +
Preference number: 6 (lower is better)
Translates to: PAESSYSLWLCF*ESSDSNGGDQV
Trigger: GACCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGTGAGTATGAGGATTCGGCCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp TGGACCGAGGCAAGGTCAGAATCCGCCCGTTTTTCTTaGCTCCGTTCATGTGTGTGTAAGGGATGTGTTCCT +
Preference number: 6 (lower is better)
Translates to: WTEARSESARFS*LRSCVCKGCVP
Trigger: AGGAACACATCCCTTACACACACATGAACGGAGGCAAGAAAAACGGGCGGATTCTGACCTTGCCTCGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302850.10
ENST00000341500.9
CDS CCA 72 bp TCCCCATTGGTCTTCAGGGCAATGTCGTTTCTCTCCTaGCGCCCCTTGGTTCCTGAAACTTCTTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: SPLVFRAMSFLS*RPLVPETSSIL
Trigger: CAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACATTGCCCTGAAGACCAATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CCA 72 bp GCTTCGAGTGACATTACTGGTGGCAGCTCTCACGGGTaGTTCTGGTTACTTGAATGCAGGGCCAACAGCTTA +
Preference number: 6 (lower is better)
Translates to: ASSDITGGSSHG*FWLLECRANSL
Trigger: TAAGCTGTTGGCCCTGCATTCAAGTAACCAGAACCACCCGTGAGAGCTGCCACCAGTAATGTCACTCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600492.1
CDS CAA 72 bp TCTAGCTCAGCTGCCAGATTGTTGCCTCCTCGAATGTaGATGATCAGACTCCCGTTGATGACGGTGCATCCT +
Preference number: 6 (lower is better)
Translates to: SSSAARLLPPRM*MIRLPLMTVHP
Trigger: AGGATGCACCGTCATCAACGGGAGTCTGATCATCAACATTCGAGGAGGCAACAATCTGGCAGCTGAGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp AAGTGTCCTTCGATGACAGAGCAATTCTCCAGCTCATaGAACCTAGTGAGGTTGTTCCGGATATCCATGCCG +
Preference number: 6 (lower is better)
Translates to: KCPSMTEQFSSS*NLVRLFRISMP
Trigger: CGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTGGAGAATTGCTCTGTCATCGAAGGACACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp TTAAGTAACTCATTTTCACAGGATGCCTGGTCCCCATaGGTCTTCAGGGCAATGTCGTTTCTCTCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: LSNSFSQDAWSP*VFRAMSFLSWR
Trigger: GCGCCAGGAGAGAAACGACATTGCCCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAATGAGTTACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 90 bp CGGCGGATTTTTAGATACCCTGAAATTTCTTCAATGAGGCCGAGGTaGGCTTCTAGCTCAGCTGCCAGATTGTTGCCTCCTCGAATGTTG +
Preference number: 6 (lower is better)
Translates to: RRIFRYPEISSMRPR*ASSSAARLLPPRML
Trigger: CAACATTCGAGGAGGCAACAATCTGGCAGCTGAGCTAGAAGCCAACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp GGGAAACTGAGGTCTCGGAAATCTTCGGGCCTCGTTTaGAACATCAAGAGTATCTGCAAGTGTCCTTCGATG +
Preference number: 6 (lower is better)
Translates to: GKLRSRKSSGLV*NIKSICKCPSM
Trigger: CATCGAAGGACACTTGCAGATACTCTTGATGTTCAAAACGAGGCCCGAAGATTTCCGAGACCTCAGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 90 bp GGGTCGTTATGTTTTCAAAGCAGAAAGCCAGACGAACCTCCAATTTaGACAGTAAAATCATGGGCGACCATGCAGTTTCTCGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: GSLCFQSRKPDEPPI*TVKSWATMQFLAAR
Trigger: CCTGGCAGCGAGAAACTGCATGGTCGCCCATGATTTTACTGTCAAAATTGGAGGTTCGTCTGGCTTTCTGCTTTGAAAACATAACGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593970.1
CDS CAA 90 bp ATGAGTTTGGGGAAACTGAGGTCTCGGAAATCTTCGGGCCTCGTTTaGAACATCAAGAGTATCTGCAAGTGTCCTTCGATGACAGAGCAA +
Preference number: 6 (lower is better)
Translates to: MSLGKLRSRKSSGLV*NIKSICKCPSMTEQ
Trigger: TTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAAAACGAGGCCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS TCA 72 bp ATCGGCGGATTTTTAGATACCCTGAAATTTCTTCAATaGGGCCGAGGTTGGCTTCTAGCTCAGCTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: IGGFLDTLKFLQ*GRGWLLAQLPD
Trigger: ATCTGGCAGCTGAGCTAGAAGCCAACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp CTCTTCCTGATAAAATTCCCCTCGAAATTTCGAAACTaGAAGATCTCTTCCTCCACCCAGGAAAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LFLIKFPSKFRN*KISSSTQERAP
Trigger: TGGAGCCCTTTCCTGGGTGGAGGAAGAGATCTTGCAGTTTCGAAATTTCGAGGGGAATTTTATCAGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598216.1
CDS CAA 72 bp TTTAGATACCCTGAAATTTCTTCAATGAGGCCGAGGTaGGCTTCTAGCTCAGCTGCCAGATTGTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: FRYPEISSMRPR*ASSSAARLLPP
Trigger: AGGAGGCAACAATCTGGCAGCTGAGCTAGAAGCCAACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS GCA 72 bp AAATCTTCGGGCCTCGTTTTGAACATCAAGAGTATCTaGAAGTGTCCTTCGATGACAGAGCAATTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: KSSGLVLNIKSI*KCPSMTEQFSS
Trigger: GCTGGAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAAAACGAGGCCCGAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302850.10
ENST00000341500.9
ENST00000598216.1
CDS CAA 72 bp TGTTTTCAAAGCAGAAAGCCAGACGAACCTCCAATTTaGACAGTAAAATCATGGGCGACCATGCAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: CFQSRKPDEPPI*TVKSWATMQFL
Trigger: GAGAAACTGCATGGTCGCCCATGATTTTACTGTCAAAATTGGAGGTTCGTCTGGCTTTCTGCTTTGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593970.1