RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INSC (Homo sapiens)

Ensembl gene IDs: ENSG00000188487

Ensembl transcript IDs: ENST00000379554.7, ENST00000379556.8, ENST00000424273.5, ENST00000447214.6, ENST00000525218.1, ENST00000526102.1, ENST00000528567.5, ENST00000530161.5

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCAGAGTAAGAAGGAGTCCACCAGCCGAGGCTGGACCAACTGCTaGAAGTCAGAGTCCTGGAGGCCTTCAGGGCAGACCCCAGCCAAT +
Preference number: 1 (lower is better)
Translates to: LQSKKESTSRGWTNC*KSESWRPSGQTPAN
Trigger: ATTGGCTGGGGTCTGCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGGTGGACTCCTTCTTACTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
3UTR GCA 90 bp ATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTaGAGAGTAAGAAGGAGTCCACCAGCCGAGGCTGGACCAACTGCT +
Preference number: 1 (lower is better)
Translates to: ISSPTLTTQNSPPCC*RVRRSPPAEAGPTA
Trigger: AGCAGTTGGTCCAGCCTCGGCTGGTGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
3UTR TCA 90 bp TCACTGAGTGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTaGGTGGGCATGAGCTGGCTTCAGCACACCACTGCTTTCAAGTAT +
Preference number: 1 (lower is better)
Translates to: SLSAELGRNSHSCPL*VGMSWLQHTTAFKY
Trigger: ATACTTGAAAGCAGTGGTGTGCTGAAGCCAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCACTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR TCA 90 bp CAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGAGGTaGACAGGAGGTTACACAAAAGCAAAGAAGCCAAAGGAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: QSFNKPHLRILFTRR*TGGYTKAKKPKEAG
Trigger: CCCTGCTTCCTTTGGCTTCTTTGCTTTTGTGTAACCTCCTGTTCACCTCCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR CAA 90 bp ATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTaGCTGCAGAGTAAGAAGGAGTCCACCAGCCGAGGCTGGACCAAC +
Preference number: 2 (lower is better)
Translates to: MYFFAHTHYTKLSSM*LQSKKESTSRGWTN
Trigger: GTTGGTCCAGCCTCGGCTGGTGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
3UTR-3UTR TCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGCTATTCACCAGGAGGTaGACAGGAGGTTACACAAAA +
Preference number: 2 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKLFTRR*TGGYTK
Trigger: TTTTGTGTAACCTCCTGTTCACCTCCTGGTGAATAG...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACTCAGATGTGTTCACTaGTGCATAGTCAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: INKKMRRAGMYSDVFTGALRCVH*CIVRGG
Trigger: ACCCCCTCTGACTATGCACCAGTGAACACATCTGAG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
3UTR-3UTR CCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCTCAGATGTGTTCACTaGTGCATAGTCAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRLRCVH*CIVRGG
Trigger: ACCCCCTCTGACTATGCACCAGTGAACACATCTGAG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR TCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGCTTTGGGTGTATTTTTaGAAGTCACTTTGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELLWVYF*KSLWFL
Trigger: GAGAAACCAAAGTGACTTTCAAAAATACACCCAAAG...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR GCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGATGTGTTCACTGGTaGATAGTCAGAGGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLRCVHW*IVRGGV
Trigger: CACACCCCCTCTGACTATGCACCAGTGAACACATCT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTAGATGTGTTCACTGGTaGATAGTCAGAGGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIRCVHW*IVRGGV
Trigger: CACACCCCCTCTGACTATGCACCAGTGAACACATCT...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
3UTR-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAGAAGATGAGGAGAGCTaGTATGTACTCAGATGTGTT +
Preference number: 2 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAEDEES*YVLRCV
Trigger: AACACATCTGAGTACATACCAGCTCTCCTCATCTTC...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
3UTR-3UTR CCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGGAAGATGAGGAGAGCTaGTATGTACTCAGATGTGTT +
Preference number: 2 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLEDEES*YVLRCV
Trigger: AACACATCTGAGTACATACCAGCTCTCCTCATCTTC...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR CCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGGGTTGGAAAAGTTTTTaGGGAATGAAACCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLGWKSF*GMKPGK
Trigger: CTTCCCAGGTTTCATTCCCCAAAAACTTTTCCAACC...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTGAAGATGAGGAGAGCTaGTATGTACTCAGATGTGTT +
Preference number: 2 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIEDEES*YVLRCV
Trigger: AACACATCTGAGTACATACCAGCTCTCCTCATCTTC...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
3UTR-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAAGTGGAATCACCCATaGCAATTTGTCATATTTGTC +
Preference number: 2 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLKWNHP*QFVIFV
Trigger: GACAAATATGACAAATTGTCATGGGTGATTCCACTT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR GCA 72 bp CCCACACTCACTACACAAAACTCTCCTCCATGTTGCTaGAGAGTAAGAAGGAGTCCACCAGCCGAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: PTLTTQNSPPCC*RVRRSPPAEAG
Trigger: TCCAGCCTCGGCTGGTGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
3UTR TCA 72 bp GCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTaGGTGGGCATGAGCTGGCTTCAGCACACCACTGCT +
Preference number: 3 (lower is better)
Translates to: AELGRNSHSCPL*VGMSWLQHTTA
Trigger: AGCAGTGGTGTGCTGAAGCCAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR GCA 72 bp GAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTaGATAGTCAGAGGGGGTGTGAGAACAGCCAAATGT +
Preference number: 3 (lower is better)
Translates to: EESWYVLRCVHW*IVRGGVRTAKC
Trigger: ACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
3UTR CCA 72 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTaGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAA +
Preference number: 3 (lower is better)
Translates to: DEESWYVLRCVH*CIVRGGVRTAK
Trigger: TTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
3UTR TCA 72 bp GAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATaGGCTGGCTTCAGCACACCACTGCTTTCAAGTATA +
Preference number: 3 (lower is better)
Translates to: EEILTVVPCEWA*AGFSTPLLSSI
Trigger: TATACTTGAAAGCAGTGGTGTGCTGAAGCCAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR GCA 72 bp GAAGTAGCTCATGGCTACCAACGCAAGGTCACTGAGTaGAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: EVAHGYQRKVTE*RVRKKFSQLSL
Trigger: AAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCACTCAGTGACCTTGCGTTGGTAGCCATGAGCTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR CAA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGAAACTTGCTAGGCAGTaGAAATCCTCTGGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKKLARQ*KSSGSK
Trigger: TTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTTT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR CAA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACAAACTTGCTAGGCAGTaGAAATCCTCTGGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHKLARQ*KSSGSK
Trigger: TTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTTT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAAACTCTCCTCCATGTaGCTGCAGAGTAAGAAGGAG +
Preference number: 3 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAKLSSM*LQSKKE
Trigger: CTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
3UTR TCA 72 bp AGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTaGAAGTCACTTTGGTTTCTCACTAAGTCACTCAGA +
Preference number: 3 (lower is better)
Translates to: RKQGFWCLWVYF*KSLWFLTKSLR
Trigger: TCTGAGTGACTTAGTGAGAAACCAAAGTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR TCA 72 bp AATAAGCCTCATCTGAGGATTCTATTCACCAGGAGGTaGACAGGAGGTTACACAAAAGCAAAGAAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: NKPHLRILFTRR*TGGYTKAKKPK
Trigger: CTTTGGCTTCTTTGCTTTTGTGTAACCTCCTGTTCACCTCCTGGTGAATAGAATCCTCAGATGAGGCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
3UTR-3UTR CAA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGGGGTTTCTGGTGCCTTaGGGTGTATTTTTGAAAGTC +
Preference number: 3 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLGFLVP*GVFLKV
Trigger: GACTTTCAAAAATACACCCAAAGGCACCAGAAACCC...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCAGACGGGACATGCAGCTaGGCCGCACGGCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: QPRLDQLLKVRVLEAFRADGTCS*AARPPV
Trigger: CACGGGAGGCCGTGCGGCTCAGCTGCATGTCCCGTC...TGCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCCCTCCTGGGTCAGGCTaGACAGGTTCCCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGPPGSG*TGSLWW
Trigger: CCACCACAGGGAACCTGTTCAGCCTGACCCAGGAGG...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCAGCCCGTGTGGCCTCTaGGTGGCTGTTGTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGSPCGL*VAVVGQ
Trigger: CTGACCGACAACAGCCACTCAGAGGCCACACGGGCT...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp CAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCACGTTTGAGCAGCAGCTaGAGGGGGTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QPRLDQLLKVRVLEAFRARLSSS*RGSPGP
Trigger: TGGCCCTGGAGACCCCCTGCAGCTGCTGCTCAAACG...TGCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCAAGGGAGCCCCCTCCTaGGTCAGGCTGAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGKGAPS*VRLNRF
Trigger: GAACCTGTTCAGCCTGACCCAGGAGGGGGCTCCCTT...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp CAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCAAGCGTGCGGAGCGCCTaGGGGTACAAGCACCGGAAA +
Preference number: 4 (lower is better)
Translates to: QPRLDQLLKVRVLEAFRASVRSA*GYKHRK
Trigger: TTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCT...TGCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp AGTCCACCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCATCTGGGTCTCGGCTaGGACGAGCCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPPAEAGPTAESQSPGGLHLGLG*DEPGSL
Trigger: CAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATG...AAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGGTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCACGAGCCAGGGTCACTaGAGCTTTCTGCTGGACTCG +
Preference number: 4 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGTSQGH*SFLLDS
Trigger: CGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGT...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGCGAGCGGCCAGTGGTaGCGGGGCGCAGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVASGQW*RGAAGA
Trigger: AGCTCCAGCTGCGCCCCGCCACCACTGGCCGCTCGC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379556.8
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGACGGGACATGCAGCTaGGCCGCACGGCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVDGTCS*AARPPV
Trigger: CACGGGAGGCCGTGCGGCTCAGCTGCATGTCCCGTC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGCTGACCCGGCAGGGTaGCGGAGTCCAGGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGADPAG*RSPGGD
Trigger: GTCGCCACCTGGACTCCGTCACCCTGCCGGGTCAGC...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCTGCTCATTCTCAACCTaGAGGCACCTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGCSFST*RHLSVT
Trigger: AGTCACAGAGAGGTGCCTTCAGGTTGAGAATGAGCA...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGCCAGCTCCAGCAGCTaGCCAAAGTGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVASSSS*PKCWPS
Trigger: GCTGGGCCAGCACTTTGGTCAGCTGCTGGAGCTGGC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGGACGGGACATGCAGCTaGGCCGCACGGCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKDGTCS*AARPPV
Trigger: CACGGGAGGCCGTGCGGCTCAGCTGCATGTCCCGTC...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGCATGCTGTGCACCCGTaGCCAGCGGTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMHAVHP*PAVLGQ
Trigger: CTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATG...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAACGCACGCTCATGCTGTaGACCCGTGCCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQRTLML*TRAQRS
Trigger: GGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCG...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAACGTGCCCAGCGGTCCTaGGCCAGCTTCTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQRAQRS*ASFCPI
Trigger: GATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACG...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAGGTGACGGGCAGGTGTaGGGAGGTGACCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQGDGQV*GGDLGH
Trigger: GTGGCCCAGGTCACCTCCCCACACCTGCCCGTCACC...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGATCAGGTGTAGCCGCTaGCCCGGCAGGGTGACGGAG +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGIRCSR*PGRVTE
Trigger: CTCCGTCACCCTGCCGGGTCAGCGGCTACACCTGAT...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCAGCACTGTACTCGCTaGCCATGGAGCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVQHCTR*PWSGHG
Trigger: GCCATGCCCGCTCCATGGTCAGCGAGTACAGTGCTG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGGCCAGCTCCAGCAGCTaGCCAAAGTGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMASSSS*PKCWPS
Trigger: GCTGGGCCAGCACTTTGGTCAGCTGCTGGAGCTGGC...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCCTCCTGGGTCAGGCTaGACAGGTTCCCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVPPGSG*TGSLWW
Trigger: CCACCACAGGGAACCTGTTCAGCCTGACCCAGGAGG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCCCCCATTTTCCTGAATaGTGTCAGAGGCACACTGTT +
Preference number: 4 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGPHFPE*CQRHTV
Trigger: AACAGTGTGCCTCTGACATCATTCAGGAAAATGGGG...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCATCTGGGTCTCGGCTaGGACGAGCCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVHLGLG*DEPGSL
Trigger: CAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAATGCTTGCAGCGGTCGTaGCCGGCACAGCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQCLQRS*PAQHSL
Trigger: GAGGCTGTGCTGTGCCGGTCACGACCGCTGCAAGCA...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379554.7
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGTCCTGGGCCAGCTTCTaGCCGATCCTGCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVSWASF*PILRSS
Trigger: AGAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGA...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGCGCACGCTCATGCTGTaGACCCGTGCCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELRTLML*TRAQRS
Trigger: GGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCG...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGTCAGACGCACGCTCATaGTGTGCACCCGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVSDARS*CAPVPS
Trigger: GCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGA...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGAGATGGAGGCCAGCGTaGGGAGCGCCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMRWRPA*GAPGGT
Trigger: TGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGAGATGGAGGCCAGCGTaGGGAGCGCCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGRWRPA*GAPGGT
Trigger: TGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCT...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp CCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAAGAAGGAGTGGTGACGGGCAGGTGTaGGGAGGTGACCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PTLTTQNSPPCCCRVRRSGDGQV*GGDLGH
Trigger: GTGGCCCAGGTCACCTCCCCACACCTGCCCGTCACC...ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp AGTCCACCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCCAGGAGAACACGGATaGCATTCAACTGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPPAEAGPTAESQSPGGLPGEHG*HSTAGA
Trigger: TGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGG...AAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGGTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGCAGCACTGTACTCGCTaGCCATGGAGCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGQHCTR*PWSGHG
Trigger: GCCATGCCCGCTCCATGGTCAGCGAGTACAGTGCTG...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGAAGGCACCTCTCTGTaGCTGCCGAGAGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGEGTSL*LPRAPS
Trigger: GCTCGGAGCTCTCGGCAGTCACAGAGAGGTGCCTTC...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGAGCCCGTGTGGCCTCTaGGTGGCTGTTGTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMSPCGL*VAVVGQ
Trigger: CTGACCGACAACAGCCACTCAGAGGCCACACGGGCT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGAGGGCCAGGGCCACCTaGCAGGATGAGGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELRARAT*QDEVTL
Trigger: CAGGGTGACCTCATCCTGGCAGGTGGCCCTGGCCCT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTACGCACGCTCATGCTGTaGACCCGTGCCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: ISSPTLTTQNSPPCCCRVRTLML*TRAQRS
Trigger: GGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCG...TACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTCAGACGCACGCTCATaGTGTGCACCCGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMSDARS*CAPVPS
Trigger: GCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGA...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGAGATGGAGGCCAGCGTaGGGAGCGCCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKRWRPA*GAPGGT
Trigger: TGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCCGCACGGCCTCCCGTaGCACATCTGGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISPHGLP*HIWVSA
Trigger: AGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGTGGCCGCCTCTCCATTaGCAGGGGGCCGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELWPPLH*QGAVSW
Trigger: CCATGAGACGGCCCCCTGGCAATGGAGAGGCGGCCA...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379554.7
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCCGTGCCCAGCGGTCCTaGGCCAGCTTCTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFRAQRS*ASFCPI
Trigger: GATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACG...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAACCATGGAGCGGGCATaGCAGGTCAGACGCACGCTC +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQTMERA*QVRRTL
Trigger: GAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGGT...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAAGCGTGCGGAGCGCCTaGGGGTACAAGCACCGGAAA +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQSVRSA*GYKHRK
Trigger: TTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCT...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCAGCCTCAGCCCGTGTaGCCTCTGAGTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVQPQPV*PLSGCC
Trigger: ACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACGGTGACGGGCAGGTGTaGGGAGGTGACCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHGDGQV*GGDLGH
Trigger: GTGGCCCAGGTCACCTCCCCACACCTGCCCGTCACC...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGCTCCCGTGCCACATCTaGGTCTCGGCTGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGLPCHI*VSAETS
Trigger: GCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAG...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTATCAGGTGTAGCCGCTaGCCCGGCAGGGTGACGGAG +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISIRCSR*PGRVTE
Trigger: CTCCGTCACCCTGCCGGGTCAGCGGCTACACCTGAT...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACATCAGGTGTAGCCGCTaGCCCGGCAGGGTGACGGAG +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHIRCSR*PGRVTE
Trigger: CTCCGTCACCCTGCCGGGTCAGCGGCTACACCTGAT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGGAAGGCACCTCTCTGTaGCTGCCGAGAGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELEGTSL*LPRAPS
Trigger: GCTCGGAGCTCTCGGCAGTCACAGAGAGGTGCCTTC...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCGCCAGCTCCAGCAGCTaGCCAAAGTGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFASSSS*PKCWPS
Trigger: GCTGGGCCAGCACTTTGGTCAGCTGCTGGAGCTGGC...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGCACCCTCCTTGGCTATaGTGCGGCACAAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKHPPWL*CGTREP
Trigger: GGGCTCCCTTGTGCCGCATCATAGCCAAGGAGGGTG...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGAGCCCGTGTGGCCTCTaGGTGGCTGTTGTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELSPCGL*VAVVGQ
Trigger: CTGACCGACAACAGCCACTCAGAGGCCACACGGGCT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGCATCTGGGTCTCGGCTaGGACGAGCCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELHLGLG*DEPGSL
Trigger: CAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATG...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCTACGCAGAGCAGCCTTaGATGTGCCAAAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGYAEQP*MCQNKN
Trigger: GTTTTTATTTTGGCACATTCAAGGCTGCTCTGCGTA...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACAGGGCCAGGGCCACCTaGCAGGATGAGGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHRARAT*QDEVTL
Trigger: CAGGGTGACCTCATCCTGGCAGGTGGCCCTGGCCCT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGAGTGCTGGCCCAGCATaGTCAGGGTCTCACTCACGC +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMSAGPA*SGSHSR
Trigger: GCGTGAGTGAGACCCTGAGCATGCTGGGCCAGCACT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAGACTCGCTCACAGGCTaGCACTTCAGCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQDSLTG*HFSRSP
Trigger: GGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTC...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp CAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTCCGCACGGCCTCCCGTaGCACATCTGGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QPNVFLRPHSLHKTLLHVPHGLP*HIWVSA
Trigger: AGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGG...AACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCAAGCACGGCGTCACTaGTGTTCCTCTCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVQARRH*CSSLMG
Trigger: CCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCCGTGCCCAGCGGTCCTaGGCCAGCTTCTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: CENSQMYFFAHTHYTKLSRAQRS*ASFCPI
Trigger: GATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACG...GGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp AGTCCACCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTACAGGTTCCCTGTGGTaGACTCTGTGGTGTAGATAT +
Preference number: 4 (lower is better)
Translates to: SPPAEAGPTAESQSPGGLTGSLW*TLWCRY
Trigger: ATATCTACACCACAGAGTCCACCACAGGGAACCTGT...AAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCGTGTGGCCTCTGAGTaGCTGTTGTCGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVRVASE*LLSVRM
Trigger: CATCCTGACCGACAACAGCCACTCAGAGGCCACACG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGAAGCTACTGAGGTGCTaGGTGACGGGCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGKLLRC*VTGRCG
Trigger: CCCACACCTGCCCGTCACCCAGCACCTCAGTAGCTT...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGAAGCTACTGAGGTGCTaGGTGACGGGCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMKLLRC*VTGRCG
Trigger: CCCACACCTGCCCGTCACCCAGCACCTCAGTAGCTT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp AGTCCACCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTACATGTTTGCCAAGATaGTCACAATCTGGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: SPPAEAGPTAESQSPGGLTCLPR*SQSGPE
Trigger: CTCGGGACCAGATTGTGACCATCTTGGCAAACATGT...AAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGCTCCCGTGCCACATCTaGGTCTCGGCTGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKLPCHI*VSAETS
Trigger: GCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAG...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp CCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAAGAAGGAGTCTCCCGTGCCACATCTaGGTCTCGGCTGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: PTLTTQNSPPCCCRVRRSLPCHI*VSAETS
Trigger: GCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAG...ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGCACCTGGACCTTCGCTaGCCGCCTCTCCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKHLDLR*PPLHCQ
Trigger: CTGGCAATGGAGAGGCGGCCAGCGAAGGTCCAGGTG...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379554.7
3UTR CAA 72 bp TTCGCCCACACTCACTACACAAAACTCTCCTCCATGTaGCTGCAGAGTAAGAAGGAGTCCACCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: FAHTHYTKLSSM*LQSKKESTSRG
Trigger: GCCTCGGCTGGTGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp CAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTATCAGGTGTAGCCGCTaGCCCGGCAGGGTGACGGAG +
Preference number: 4 (lower is better)
Translates to: QPNVFLRPHSLHKTLLHVIRCSR*PGRVTE
Trigger: CTCCGTCACCCTGCCGGGTCAGCGGCTACACCTGAT...AACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGCATCCAGCGCTGGACTaGGTCCACCTGCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKHPALD*VHLHQV
Trigger: CACCTGATGCAGGTGGACTCAGTCCAGCGCTGGATG...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACGAAGGCACCTCTCTGTaGCTGCCGAGAGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHEGTSL*LPRAPS
Trigger: GCTCGGAGCTCTCGGCAGTCACAGAGAGGTGCCTTC...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp GGGTGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCGAAGGCACCTCTCTGTaGCTGCCGAGAGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GCENSQMYFFAHTHYTKLEGTSL*LPRAPS
Trigger: GCTCGGAGCTCTCGGCAGTCACAGAGAGGTGCCTTC...GAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACCACCCTCCTTGGCTATaGTGCGGCACAAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHHPPWL*CGTREP
Trigger: GGGCTCCCTTGTGCCGCATCATAGCCAAGGAGGGTG...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAAGAAGGAGTCCTGCCGGCAAACCTTaGAGAGTGCTACGACCCCAC +
Preference number: 4 (lower is better)
Translates to: PTLTTQNSPPCCCRVRRSPAGKP*RVLRPH
Trigger: GTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGG...ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACAGCCCGTGTGGCCTCTaGGTGGCTGTTGTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHSPCGL*VAVVGQ
Trigger: CTGACCGACAACAGCCACTCAGAGGCCACACGGGCT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGCTGATGGGCTTGGCCTaGAGGACACACATGCACTCG +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMLMGLA*RTHMHS
Trigger: CGAGTGCATGTGTGTCCTGCAGGCCAAGCCCATCAG...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGCTGATGGGCTTGGCCTaGAGGACACACATGCACTCG +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGLMGLA*RTHMHS
Trigger: CGAGTGCATGTGTGTCCTGCAGGCCAAGCCCATCAG...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCGTTTGAGCAGCAGCTaGAGGGGGTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISRLSSS*RGSPGP
Trigger: TGGCCCTGGAGACCCCCTGCAGCTGCTGCTCAAACG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACTCCTGGGCCAGCTTCTaGCCGATCCTGCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHSWASF*PILRSS
Trigger: AGAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGA...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp CAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTAGATGGAGGCCAGCGTaGGGAGCGCCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: QPNVFLRPHSLHKTLLHVRWRPA*GAPGGT
Trigger: TGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCT...AACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGAGGAAGCTACTGAGGTaGTGGGTGACGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMRKLLR*WVTGRC
Trigger: ACACCTGCCCGTCACCCAGCACCTCAGTAGCTTCCT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGCGGATGGCATTCAACTaGAGGAGCATCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMRMAFN*RSISQA
Trigger: GGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCG...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGCGTGTCCACTCTCTaGTTGTCACTGCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGGVSTL*LSLQAS
Trigger: GGAAGCCTGCAGTGACAAGCAGAGAGTGGACACGCC...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp CCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAAGAAGGAGTGACTCGCTCACAGGCTaGCACTTCAGCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PTLTTQNSPPCCCRVRRSDSLTG*HFSRSP
Trigger: GGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTC...ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGTCACTGCAGCTTTCTaGTGGACTCGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVVTAAF*WTRSQA
Trigger: AGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGAC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAGTGCGAGCGGCCAGTaGTGGCGGGGCGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGASASGQ*WRGAAG
Trigger: TCCAGCTGCGCCCCGCCACCACTGGCCGCTCGCACT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379556.8
CDS-3UTR CCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTACCATGGAGCGGGCATaGCAGGTCAGACGCACGCTC +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISTMERA*QVRRTL
Trigger: GAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGGT...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGAAGGGAGCCCCCTCCTaGGTCAGGCTGAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELKGAPS*VRLNRF
Trigger: GAACCTGTTCAGCCTGACCCAGGAGGGGGCTCCCTT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCAGCGTGCGGAGCGCCTaGGGGTACAAGCACCGGAAA +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFSVRSA*GYKHRK
Trigger: TTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAATCCACCTTCTCCAGCTaGTGGACACCCTCTTCCACG +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQSTFSS*WTPSST
Trigger: CGTGGAAGAGGGTGTCCACCAGCTGGAGAAGGTGGA...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGCAGCCTCAGCCCGTGTaGCCTCTGAGTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELQPQPV*PLSGCC
Trigger: ACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTG...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGACTGCAGCTTTCTGCTaGACTCGCTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGTAAFC*TRSQAA
Trigger: GGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGT...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACCTCCCGTGCCACATCTaGGTCTCGGCTGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHLPCHI*VSAETS
Trigger: GCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAG...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACCATCCAGCGCTGGACTaGGTCCACCTGCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHHPALD*VHLHQV
Trigger: CACCTGATGCAGGTGGACTCAGTCCAGCGCTGGATG...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCCATCCAGCGCTGGACTaGGTCCACCTGCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFHPALD*VHLHQV
Trigger: CACCTGATGCAGGTGGACTCAGTCCAGCGCTGGATG...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp CAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGCACTGTACTCGCTaGCCATGGAGCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: QMYFFAHTHYTKLSSMLLQHCTR*PWSGHG
Trigger: GCCATGCCCGCTCCATGGTCAGCGAGTACAGTGCTG...CAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCCACCCTCCTTGGCTATaGTGCGGCACAAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CENSQMYFFAHTHYTKLSHPPWL*CGTREP
Trigger: GGGCTCCCTTGTGCCGCATCATAGCCAAGGAGGGTG...GGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCCCTGCCGGCAAACCTTaGAGAGTGCTACGACCCCAC +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFPAGKP*RVLRPH
Trigger: GTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGG...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCCTGCCGGCAAACCTTaGAGAGTGCTACGACCCCAC +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISPAGKP*RVLRPH
Trigger: GTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTGGCAGGGGAATCACTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISGRGIT*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGTGATTCCCCTGCC...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424273.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGCGACCTCCAGGCAGTaGCATCATGTTGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVATSRQ*HHVDPN
Trigger: ATTGGGATCAACATGATGGCACTGCCTGGAGGTCGC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGCTGATGGGCTTGGCCTaGAGGACACACATGCACTCG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELLMGLA*RTHMHS
Trigger: CGAGTGCATGTGTGTCCTGCAGGCCAAGCCCATCAG...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGATGAGGTCACCCTGTaGATCCTCTTCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVDEVTL*ILFQAD
Trigger: ATCAGCCTGGAAGAGGATGCACAGGGTGACCTCATC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACATGCTGTGCACCCGTaGCCAGCGGTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAHAVHP*PAVLGQ
Trigger: CTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGGCACCTCTCTGTGACTaGCGAGAGCTCCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMAPLCD*RELRAF
Trigger: AAATGCTCGGAGCTCTCGGCAGTCACAGAGAGGTGC...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGCAAACCTTGAAGAGTaGTACGACCCCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVANLEE*YDPTLL
Trigger: AAGGAGGGTGGGGTCGTAGCACTCTTCAAGGTTTGC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGAGGAAGCTACTGAGGTaGTGGGTGACGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKRKLLR*WVTGRC
Trigger: ACACCTGCCCGTCACCCAGCACCTCAGTAGCTTCCT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGGGCGTGTCCACTCTCTaGTTGTCACTGCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELGVSTL*LSLQAS
Trigger: GGAAGCCTGCAGTGACAAGCAGAGAGTGGACACGCC...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCGACTCGCTCACAGGCTaGCACTTCAGCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFDSLTG*HFSRSP
Trigger: GGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTC...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTGACTCGCTCACAGGCTaGCACTTCAGCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISDSLTG*HFSRSP
Trigger: GGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTC...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGGTCACTGCAGCTTTCTaGTGGACTCGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMVTAAF*WTRSQA
Trigger: AGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGAC...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGACGAGCCAGGGTCACTaGAGCTTTCTGCTGGACTCG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKTSQGH*SFLLDS
Trigger: CGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGACGAGCCAGGGTCACTaGAGCTTTCTGCTGGACTCG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELTSQGH*SFLLDS
Trigger: CGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGCAAGCACGGCGTCACTaGTGTTCCTCTCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKQARRH*CSSLMG
Trigger: CCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTG...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACAAGGGAGCCCCCTCCTaGGTCAGGCTGAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHKGAPS*VRLNRF
Trigger: GAACCTGTTCAGCCTGACCCAGGAGGGGGCTCCCTT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCAAGGGAGCCCCCTCCTaGGTCAGGCTGAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFKGAPS*VRLNRF
Trigger: GAACCTGTTCAGCCTGACCCAGGAGGGGGCTCCCTT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACAAGCTACTGAGGTGCTaGGTGACGGGCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHKLLRC*VTGRCG
Trigger: CCCACACCTGCCCGTCACCCAGCACCTCAGTAGCTT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGGCTGACCCGGCAGGGTaGCGGAGTCCAGGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLADPAG*RSPGGD
Trigger: GTCGCCACCTGGACTCCGTCACCCTGCCGGGTCAGC...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTCATCCAGCGCTGGACTaGGTCCACCTGCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: QPNVFLRPHSLHKTLLHVHPALD*VHLHQV
Trigger: CACCTGATGCAGGTGGACTCAGTCCAGCGCTGGATG...AACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTTGTGTCAAAGAACGTaGTGTTGGCAAGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMLCQRT*CWQGPQ
Trigger: CTGCGGCCCTTGCCAACATCACGTTCTTTGACACAA...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCAACATGAGGGCTCATaGAGTAGCTCATGGCTACCA +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVQHEGS*SSSWLP
Trigger: TGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGGCACCTCTCTGTGACTaGCGAGAGCTCCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELAPLCD*RELRAF
Trigger: AAATGCTCGGAGCTCTCGGCAGTCACAGAGAGGTGC...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGGCAAACCTTGAAGAGTaGTACGACCCCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMANLEE*YDPTLL
Trigger: AAGGAGGGTGGGGTCGTAGCACTCTTCAAGGTTTGC...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAACACCGGAAACTGTCCTaGCGGCAAACCTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQHRKLS*RQTLKS
Trigger: ACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTG...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCGGATGGCATTCAACTaGAGGAGCATCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISRMAFN*RSISQA
Trigger: GGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGGTCACTGCAGCTTTCTaGTGGACTCGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELVTAAF*WTRSQA
Trigger: AGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGAC...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTACGAGCCAGGGTCACTaGAGCTTTCTGCTGGACTCG +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISTSQGH*SFLLDS
Trigger: CGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGT...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCAAGCACGGCGTCACTaGTGTTCCTCTCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISQARRH*CSSLMG
Trigger: CCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGTCTTCCATCCAGCGCTaGACTGAGTCCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELSSIQR*TESTCI
Trigger: GATGCAGGTGGACTCAGTCCAGCGCTGGATGGAAGA...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCCACCTTCTCCAGCTaGTGGACACCCTCTTCCACG +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFSTFSS*WTPSST
Trigger: CGTGGAAGAGGGTGTCCACCAGCTGGAGAAGGTGGA...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCCGTGTGGCCTCTGAGTaGCTGTTGTCGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFRVASE*LLSVRM
Trigger: CATCCTGACCGACAACAGCCACTCAGAGGCCACACG...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCGTGTGGCCTCTGAGTaGCTGTTGTCGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISRVASE*LLSVRM
Trigger: CATCCTGACCGACAACAGCCACTCAGAGGCCACACG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCACTGCAGCTTTCTGCTaGACTCGCTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFTAAFC*TRSQAA
Trigger: GGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCTCAGATGTGTTCACTaGTGCATAGTCAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVLRCVH*CIVRGG
Trigger: ACCCCCTCTGACTATGCACCAGTGAACACATCTGAG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGGCAGTGCCATCATGTTaGTCCCAATCTGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMAVPSC*SQSAAK
Trigger: CTTTGCTGCAGATTGGGATCAACATGATGGCACTGC...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGACTCGCACTCGGTCATaGGCTTCAGATCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELTRTRS*ASDLPS
Trigger: GGATGGAAGATCTGAAGCTCATGACCGAGTGCGAGT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCAGCACTGTACTCGCTaGCCATGGAGCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRQHCTR*PWSGHG
Trigger: GCCATGCCCGCTCCATGGTCAGCGAGTACAGTGCTG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAATGCTCATTCTCAACCTaGAGGCACCTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQCSFST*RHLSVT
Trigger: AGTCACAGAGAGGTGCCTTCAGGTTGAGAATGAGCA...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGCACGCAGGCCTTCATTaGCTTCAGGACATGCTCATT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMHAGLH*LQDMLI
Trigger: AATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTG...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGCACGCAGGCCTTCATTaGCTTCAGGACATGCTCATT +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGHAGLH*LQDMLI
Trigger: AATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTG...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCCCCATTTTCCTGAATaGTGTCAGAGGCACACTGTT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVPHFPE*CQRHTV
Trigger: AACAGTGTGCCTCTGACATCATTCAGGAAAATGGGG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTGGACCCCATTTTCCTaGATGATGTCAGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMWTPFS*MMSEAH
Trigger: GTGTGCCTCTGACATCATTCAGGAAAATGGGGTCCA...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCACAGTTGTCCCTTGTaGGTGGGCATGAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISHSCPL*VGMSWL
Trigger: AAGCCAGCTCATGCCCACTCACAAGGGACAACTGTG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGCAACATGAGGGCTCATaGAGTAGCTCATGGCTACCA +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGQHEGS*SSSWLP
Trigger: TGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTG...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGGATGAGGTCACCCTGTaGATCCTCTTCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKDEVTL*ILFQAD
Trigger: ATCAGCCTGGAAGAGGATGCACAGGGTGACCTCATC...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCGTTTGAGCAGCAGCTaGAGGGGGTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRRLSSS*RGSPGP
Trigger: TGGCCCTGGAGACCCCCTGCAGCTGCTGCTCAAACG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACGTTTGAGCAGCAGCTaGAGGGGGTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGARLSSS*RGSPGP
Trigger: TGGCCCTGGAGACCCCCTGCAGCTGCTGCTCAAACG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGTCCTGGGCCAGCTTCTaGCCGATCCTGCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRSWASF*PILRSS
Trigger: AGAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGA...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGTCAGACGCACGCTCATaGTGTGCACCCGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRSDARS*CAPVPS
Trigger: GCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGA...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATCAGACGCACGCTCATaGTGTGCACCCGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGASDARS*CAPVPS
Trigger: GCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGA...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGCACCGGAAACTGTCCTaGCGGCAAACCTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKHRKLS*RQTLKS
Trigger: ACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTG...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp CAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTAGGAAGCTACTGAGGTaGTGGGTGACGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QPNVFLRPHSLHKTLLHVRKLLR*WVTGRC
Trigger: ACACCTGCCCGTCACCCAGCACCTCAGTAGCTTCCT...AACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAACCATGGAGCGGGCATaGCAGGTCAGACGCACGCTC +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGATMERA*QVRRTL
Trigger: GAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGGT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCTGTGGTGGACTCTGTaGTGTAGATATTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVLWWTL*CRYCLR
Trigger: CCTCAGACAATATCTACACCACAGAGTCCACCACAG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAGCGTGCGGAGCGCCTaGGGGTACAAGCACCGGAAA +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGASVRSA*GYKHRK
Trigger: TTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACCCTGATGAGGCCTCTTaGCACAGTTTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHPDEAS*HSLTRA
Trigger: AGCCCTCGTCAAACTGTGCCAAGAGGCCTCATCAGG...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp TGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCACTGCAGCTTTCTGCTaGACTCGCTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CENSQMYFFAHTHYTKLSTAAFC*TRSQAA
Trigger: GGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGT...GGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
3UTR CAA 72 bp GTCACTGAGTGCAGAGTTAGGAAGAAATTCTCACAGTaGTCCCTTGTGAGTGGGCATGAGCTGGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VTECRVRKKFSQ*SLVSGHELASA
Trigger: TGCTGAAGCCAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCACTCAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGGCAGTGCCATCATGTTaGTCCCAATCTGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELAVPSC*SQSAAK
Trigger: CTTTGCTGCAGATTGGGATCAACATGATGGCACTGC...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACACTCGCACTCGGTCATaGGCTTCAGATCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHTRTRS*ASDLPS
Trigger: GGATGGAAGATCTGAAGCTCATGACCGAGTGCGAGT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACTTGTGTCAAAGAACGTaGTGTTGGCAAGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHLCQRT*CWQGPQ
Trigger: CTGCGGCCCTTGCCAACATCACGTTCTTTGACACAA...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTTTGTGTCAAAGAACGTaGTGTTGGCAAGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISLCQRT*CWQGPQ
Trigger: CTGCGGCCCTTGCCAACATCACGTTCTTTGACACAA...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTATTGTGTCAAAGAACGTaGTGTTGGCAAGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ISSPTLTTQNSPPCCCRVLCQRT*CWQGPQ
Trigger: CTGCGGCCCTTGCCAACATCACGTTCTTTGACACAA...TACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGTGGACCCCATTTTCCTaGATGATGTCAGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKWTPFS*MMSEAH
Trigger: GTGTGCCTCTGACATCATTCAGGAAAATGGGGTCCA...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTGATGAGGTCACCCTGTaGATCCTCTTCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISDEVTL*ILFQAD
Trigger: ATCAGCCTGGAAGAGGATGCACAGGGTGACCTCATC...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCGCACGCTCATGCTGTaGACCCGTGCCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIRTLML*TRAQRS
Trigger: GGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCGCACCTCTCTGTGACTaGCGAGAGCTCCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: CENSQMYFFAHTHYTKLSAPLCD*RELRAF
Trigger: AAATGCTCGGAGCTCTCGGCAGTCACAGAGAGGTGC...GGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAGTGCTGGCCCAGCATaGTCAGGGTCTCACTCACGC +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGASAGPA*SGSHSR
Trigger: GCGTGAGTGAGACCCTGAGCATGCTGGGCCAGCACT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAAATTTTTCTCACCAGTaGCTGAACCTCCCGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQNFSHQ*LNLPCQ
Trigger: CTGACACGGGAGGTTCAGGCACTGGTGAGAAAAATT...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTGCAAACCTTGAAGAGTaGTACGACCCCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISANLEE*YDPTLL
Trigger: AAGGAGGGTGGGGTCGTAGCACTCTTCAAGGTTTGC...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCACCGGAAACTGTCCTaGCGGCAAACCTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISHRKLS*RQTLKS
Trigger: ACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCCGCACGGCCTCCCGTaGCACATCTGGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIPHGLP*HIWVSA
Trigger: AGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAACTCTCCTCCATGTTaGTGCAGAGTAAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVNSPPC*CRVRRS
Trigger: ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTT...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGAGATGTGTTCACTGGTaGATAGTCAGAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKRCVHW*IVRGGV
Trigger: CACACCCCCTCTGACTATGCACCAGTGAACACATCT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCGCAAGGTCACTGAGTaGAGAGTTAGGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVRKVTE*RVRKKF
Trigger: GAATTTCTTCCTAACTCTGCACTCAGTGACCTTGCG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGGGCTCCAGCCTTGGCTaGAGCGACTCCAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRGSSLG*SDSKSP
Trigger: AGGAGACTTGGAGTCGCTGCAGCCAAGGCTGGAGCC...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379554.7
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCGTGCCCAGCGGTCCTaGGCCAGCTTCTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIRAQRS*ASFCPI
Trigger: GATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACAGCCTCAGCCCGTGTaGCCTCTGAGTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAQPQPV*PLSGCC
Trigger: ACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp CAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTCCTGATGAGGCCTCTTaGCACAGTTTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QPNVFLRPHSLHKTLLHVPDEAS*HSLTRA
Trigger: AGCCCTCGTCAAACTGTGCCAAGAGGCCTCATCAGG...AACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACCCAGGAGAACACGGATaGCATTCAACTGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHPGEHG*HSTAGA
Trigger: TGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGG...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCCCAGGAGAACACGGATaGCATTCAACTGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFPGEHG*HSTAGA
Trigger: TGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGG...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGAGGAGTCCCAGACCTTaGTTTTTCAGACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKRSPRP*FFRQHA
Trigger: GGCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGACTCGCACTCGGTCATaGGCTTCAGATCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: QMYFFAHTHYTKLSSMLLTRTRS*ASDLPS
Trigger: GGATGGAAGATCTGAAGCTCATGACCGAGTGCGAGT...CAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTTGCTCATTCTCAACCTaGAGGCACCTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISCSFST*RHLSVT
Trigger: AGTCACAGAGAGGTGCCTTCAGGTTGAGAATGAGCA...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACCACGCAGGCCTTCATTaGCTTCAGGACATGCTCATT +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHHAGLH*LQDMLI
Trigger: AATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTG...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCACGCAGGCCTTCATTaGCTTCAGGACATGCTCATT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISHAGLH*LQDMLI
Trigger: AATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTGCCAGCTCCAGCAGCTaGCCAAAGTGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIASSSS*PKCWPS
Trigger: GCTGGGCCAGCACTTTGGTCAGCTGCTGGAGCTGGC...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGCCTCCTGGGTCAGGCTaGACAGGTTCCCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLPPGSG*TGSLWW
Trigger: CCACCACAGGGAACCTGTTCAGCCTGACCCAGGAGG...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGCACCCTCCTTGGCTATaGTGCGGCACAAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLHPPWL*CGTREP
Trigger: GGGCTCCCTTGTGCCGCATCATAGCCAAGGAGGGTG...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTTGGACCCCATTTTCCTaGATGATGTCAGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISWTPFS*MMSEAH
Trigger: GTGTGCCTCTGACATCATTCAGGAAAATGGGGTCCA...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGAACTTGCTAGGCAGTTaGAATCCTCTGGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMNLLGS*NPLVPK
Trigger: CTTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAACTATTCACCAGGAGGTaGACAGGAGGTTACACAAAA +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQLFTRR*TGGYTK
Trigger: TTTTGTGTAACCTCCTGTTCACCTCCTGGTGAATAG...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCAACATGAGGGCTCATaGAGTAGCTCATGGCTACCA +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISQHEGS*SSSWLP
Trigger: TGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGATGTTGATCCCAATCTaGAGCAAAGCCTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELMLIPI*SKACLQ
Trigger: CTGCAAGCAGGCTTTGCTGCAGATTGGGATCAACAT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTAGGGCCAGGGCCACCTaGCAGGATGAGGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIRARAT*QDEVTL
Trigger: CAGGGTGACCTCATCCTGGCAGGTGGCCCTGGCCCT...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGAATTTTTCTCACCAGTaGCTGAACCTCCCGTGTCAG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKNFSHQ*LNLPCQ
Trigger: CTGACACGGGAGGTTCAGGCACTGGTGAGAAAAATT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379554.7
ENST00000379556.8
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACGGATGGCATTCAACTaGAGGAGCATCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGARMAFN*RSISQA
Trigger: GGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAGGCGTGTCCACTCTCTaGTTGTCACTGCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAGVSTL*LSLQAS
Trigger: GGAAGCCTGCAGTGACAAGCAGAGAGTGGACACGCC...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGTCTCCTCCATGTTGCTaGAGAGTAAGAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKSPPCC*RVRRSP
Trigger: TGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGA...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGAACTCTCCTCCATGTTaGTGCAGAGTAAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGNSPPC*CRVRRS
Trigger: ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTT...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp GGGTGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCAGATGTGTTCACTGGTaGATAGTCAGAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GCENSQMYFFAHTHYTKLRCVHW*IVRGGV
Trigger: CACACCCCCTCTGACTATGCACCAGTGAACACATCT...GAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGCGCAAGGTCACTGAGTaGAGAGTTAGGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGRKVTE*RVRKKF
Trigger: GAATTTCTTCCTAACTCTGCACTCAGTGACCTTGCG...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGACCATGGAGCGGGCATaGCAGGTCAGACGCACGCTC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLTMERA*QVRRTL
Trigger: GAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGGT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATCCACCTTCTCCAGCTaGTGGACACCCTCTTCCACG +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGASTFSS*WTPSST
Trigger: CGTGGAAGAGGGTGTCCACCAGCTGGAGAAGGTGGA...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGACATGTTTGCCAAGATaGTCACAATCTGGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELTCLPR*SQSGPE
Trigger: CTCGGGACCAGATTGTGACCATCTTGGCAAACATGT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGACATGTTTGCCAAGATaGTCACAATCTGGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKTCLPR*SQSGPE
Trigger: CTCGGGACCAGATTGTGACCATCTTGGCAAACATGT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCAGGAGTCCCAGACCTTaGTTTTTCAGACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFRSPRP*FFRQHA
Trigger: GGCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGACTGCAGCTTTCTGCTaGACTCGCTCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRTAAFC*TRSQAA
Trigger: GGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGT...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCTCAGATGTGTTCACTaGTGCATAGTCAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISLRCVH*CIVRGG
Trigger: ACCCCCTCTGACTATGCACCAGTGAACACATCTGAG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGTTTCTCACCAGTGCCTaGGAGGCTGAGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRFLTSA*EAEAGE
Trigger: TTCCCCTGCCTCAGCCTCCCAGGCACTGGTGAGAAA...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424273.5
CDS-3UTR TCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCCTCCTGGGTCAGGCTaGACAGGTTCCCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIPPGSG*TGSLWW
Trigger: CCACCACAGGGAACCTGTTCAGCCTGACCCAGGAGG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCATCTGGGTCTCGGCTaGGACGAGCCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIHLGLG*DEPGSL
Trigger: CAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGAACTTGCTAGGCAGTTaGAATCCTCTGGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKNLLGS*NPLVPK
Trigger: CTTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTT...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGAACTTGCTAGGCAGTTaGAATCCTCTGGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELNLLGS*NPLVPK
Trigger: CTTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTT...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCACAGTTGTCCCTTGTaGGTGGGCATGAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRHSCPL*VGMSWL
Trigger: AAGCCAGCTCATGCCCACTCACAAGGGACAACTGTG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTATGTTGATCCCAATCTaGAGCAAAGCCTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISMLIPI*SKACLQ
Trigger: CTGCAAGCAGGCTTTGCTGCAGATTGGGATCAACAT...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTTCCTGGGCCAGCTTCTaGCCGATCCTGCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFISWASF*PILRSS
Trigger: AGAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGA...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCAATTTTTCTCACCAGTaGCTGAACCTCCCGTGTCAG +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFNFSHQ*LNLPCQ
Trigger: CTGACACGGGAGGTTCAGGCACTGGTGAGAAAAATT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000528567.5
CDS-3UTR GCA 90 bp GGGTGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCTCCTCCATGTTGCTaGAGAGTAAGAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GCENSQMYFFAHTHYTKLSPPCC*RVRRSP
Trigger: TGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGA...GAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGTCTTCCATCCAGCGCTaGACTGAGTCCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRSSIQR*TESTCI
Trigger: GATGCAGGTGGACTCAGTCCAGCGCTGGATGGAAGA...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCTGTGGTGGACTCTGTaGTGTAGATATTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISLWWTL*CRYCLR
Trigger: CCTCAGACAATATCTACACCACAGAGTCCACCACAG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTACTGTGGTGGACTCTGTaGTGTAGATATTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISSPTLTTQNSPPCCCRVLWWTL*CRYCLR
Trigger: CCTCAGACAATATCTACACCACAGAGTCCACCACAG...TACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACACAGGTTCCCTGTGGTaGACTCTGTGGTGTAGATAT +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHTGSLW*TLWCRY
Trigger: ATATCTACACCACAGAGTCCACCACAGGGAACCTGT...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCCTGATGAGGCCTCTTaGCACAGTTTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRPDEAS*HSLTRA
Trigger: AGCCCTCGTCAAACTGTGCCAAGAGGCCTCATCAGG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCACATGTTTGCCAAGATaGTCACAATCTGGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFTCLPR*SQSGPE
Trigger: CTCGGGACCAGATTGTGACCATCTTGGCAAACATGT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp CAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGAGGAGTCCCAGACCTTaGTTTTTCAGACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: QMYFFAHTHYTKLSSMLLRSPRP*FFRQHA
Trigger: GGCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCT...CAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CCA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGAAGATGAGGAGAGCTaGTATGTACTCAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGEDEES*YVLRCV
Trigger: AACACATCTGAGTACATACCAGCTCTCCTCATCTTC...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGGAAGATGAGGAGAGCTaGTATGTACTCAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMEDEES*YVLRCV
Trigger: AACACATCTGAGTACATACCAGCTCTCCTCATCTTC...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAGAAGATGAGGAGAGCTaGTATGTACTCAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQEDEES*YVLRCV
Trigger: AACACATCTGAGTACATACCAGCTCTCCTCATCTTC...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAAGTGGAATCACCCATaGCAATTTGTCATATTTGTC +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVKWNHP*QFVIFV
Trigger: GACAAATATGACAAATTGTCATGGGTGATTCCACTT...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGCTTTGGGTGTATTTTTaGAAGTCACTTTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVLWVYF*KSLWFL
Trigger: GAGAAACCAAAGTGACTTTCAAAAATACACCCAAAG...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACCTATTCACCAGGAGGTaGACAGGAGGTTACACAAAA +
Preference number: 4 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHLFTRR*TGGYTK
Trigger: TTTTGTGTAACCTCCTGTTCACCTCCTGGTGAATAG...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGGCGACCTCCAGGCAGTaGCATCATGTTGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRATSRQ*HHVDPN
Trigger: ATTGGGATCAACATGATGGCACTGCCTGGAGGTCGC...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGGATGAGGTCACCCTGTaGATCCTCTTCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRDEVTL*ILFQAD
Trigger: ATCAGCCTGGAAGAGGATGCACAGGGTGACCTCATC...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTAGTGCTGGCCCAGCATaGTCAGGGTCTCACTCACGC +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFISAGPA*SGSHSR
Trigger: GCGTGAGTGAGACCCTGAGCATGCTGGGCCAGCACT...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCACCGGAAACTGTCCTaGCGGCAAACCTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRHRKLS*RQTLKS
Trigger: ACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGAAGCTACTGAGGTaGTGGGTGACGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLRKLLR*WVTGRC
Trigger: ACACCTGCCCGTCACCCAGCACCTCAGTAGCTTCCT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGCGGATGGCATTCAACTaGAGGAGCATCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLRMAFN*RSISQA
Trigger: GGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCG...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCGCAAGGTCACTGAGTaGAGAGTTAGGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISRKVTE*RVRKKF
Trigger: GAATTTCTTCCTAACTCTGCACTCAGTGACCTTGCG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCAGCCTCAGCCCGTGTaGCCTCTGAGTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIQPQPV*PLSGCC
Trigger: ACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACCAGGAGAACACGGATaGCATTCAACTGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAPGEHG*HSTAGA
Trigger: TGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGGGTTGGAAAAGTTTTTaGGGAATGAAACCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKGWKSF*GMKPGK
Trigger: CTTCCCAGGTTTCATTCCCCAAAAACTTTTCCAACC...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCAGGAAGCAGGGTTTCTaGTGCCTTTGGGTGTATTTT +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFRKQGF*CLWVYF
Trigger: AAAATACACCCAAAGGCACCAGAAACCCTGCTTCCT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATGCTCATTCTCAACCTaGAGGCACCTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGACSFST*RHLSVT
Trigger: AGTCACAGAGAGGTGCCTTCAGGTTGAGAATGAGCA...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGCACAGTTGTCCCTTGTaGGTGGGCATGAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLHSCPL*VGMSWL
Trigger: AAGCCAGCTCATGCCCACTCACAAGGGACAACTGTG...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGGCACCTCTCTGTGACTaGCGAGAGCTCCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLAPLCD*RELRAF
Trigger: AAATGCTCGGAGCTCTCGGCAGTCACAGAGAGGTGC...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCAAGCACGGCGTCACTaGTGTTCCTCTCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIQARRH*CSSLMG
Trigger: CCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAGATGTGTTCACTGGTaGATAGTCAGAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGARCVHW*IVRGGV
Trigger: CACACCCCCTCTGACTATGCACCAGTGAACACATCT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGTCTTCCATCCAGCGCTaGACTGAGTCCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLSSIQR*TESTCI
Trigger: GATGCAGGTGGACTCAGTCCAGCGCTGGATGGAAGA...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCGTGTGGCCTCTGAGTaGCTGTTGTCGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIRVASE*LLSVRM
Trigger: CATCCTGACCGACAACAGCCACTCAGAGGCCACACG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGCCTGATGAGGCCTCTTaGCACAGTTTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLPDEAS*HSLTRA
Trigger: AGCCCTCGTCAAACTGTGCCAAGAGGCCTCATCAGG...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCGAAGATGAGGAGAGCTaGTATGTACTCAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFEDEES*YVLRCV
Trigger: AACACATCTGAGTACATACCAGCTCTCCTCATCTTC...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCGGTTGGAAAAGTTTTTaGGGAATGAAACCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFGWKSF*GMKPGK
Trigger: CTTCCCAGGTTTCATTCCCCAAAAACTTTTCCAACC...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTTCATGGCTCCAGCCTTaGCTGCAGCGACTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFISWLQP*LQRLQV
Trigger: GACTTGGAGTCGCTGCAGCCAAGGCTGGAGCCATGA...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379554.7
CDS-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGACTCGCACTCGGTCATaGGCTTCAGATCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLTRTRS*ASDLPS
Trigger: GGATGGAAGATCTGAAGCTCATGACCGAGTGCGAGT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACCCCATTTTCCTGAATaGTGTCAGAGGCACACTGTT +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAPHFPE*CQRHTV
Trigger: AACAGTGTGCCTCTGACATCATTCAGGAAAATGGGG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp CCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAAGAAGGAGTAAGTGGAATCACCCATaGCAATTTGTCATATTTGTC +
Preference number: 4 (lower is better)
Translates to: PTLTTQNSPPCCCRVRRSKWNHP*QFVIFV
Trigger: GACAAATATGACAAATTGTCATGGGTGATTCCACTT...ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTGTCACTGCAGCTTTCTaGTGGACTCGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIVTAAF*WTRSQA
Trigger: AGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGAC...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGTCTCCTCCATGTTGCTaGAGAGTAAGAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRSPPCC*RVRRSP
Trigger: TGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGA...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGAAAAAGCGAAAGCTGTaGTTTATAGCATCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMKKRKL*FIASVN
Trigger: ATTCACAGATGCTATAAAGCACAGCTTTCGCTTTTT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACTGTGGTGGACTCTGTaGTGTAGATATTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGALWWTL*CRYCLR
Trigger: CCTCAGACAATATCTACACCACAGAGTCCACCACAG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGATCTGTGAATTTCTGTaGTGTAAATACTCCCACTAT +
Preference number: 4 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMICEFL*CKYSHY
Trigger: ATAGTGGGAGTATTTACACCACAGAAATTCACAGAT...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGTGGACCCCATTTTCCTaGATGATGTCAGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLWTPFS*MMSEAH
Trigger: GTGTGCCTCTGACATCATTCAGGAAAATGGGGTCCA...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTAAGTGGAATCACCCATaGCAATTTGTCATATTTGTC +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISKWNHP*QFVIFV
Trigger: GACAAATATGACAAATTGTCATGGGTGATTCCACTT...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGAACTTGCTAGGCAGTTaGAATCCTCTGGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRNLLGS*NPLVPK
Trigger: CTTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTT...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCTATTCACCAGGAGGTaGACAGGAGGTTACACAAAA +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRLFTRR*TGGYTK
Trigger: TTTTGTGTAACCTCCTGTTCACCTCCTGGTGAATAG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTATCCCCAGATTTTTGTaGTACTTTCAAGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISIPRFL*YFQAVK
Trigger: TTTCACTGCTTGAAAGTATCACAAAAATCTGGGGAT...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAACTCTCCTCCATGTTaGTGCAGAGTAAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGANSPPC*CRVRRS
Trigger: ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAGGAAGCAGGGTTTCTaGTGCCTTTGGGTGTATTTT +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGARKQGF*CLWVYF
Trigger: AAAATACACCCAAAGGCACCAGAAACCCTGCTTCCT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTGCAGTGCCATCATGTTaGTCCCAATCTGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIAVPSC*SQSAAK
Trigger: CTTTGCTGCAGATTGGGATCAACATGATGGCACTGC...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR GCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGATGTTGATCCCAATCTaGAGCAAAGCCTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLMLIPI*SKACLQ
Trigger: CTGCAAGCAGGCTTTGCTGCAGATTGGGATCAACAT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGACAGGTTCCCTGTGGTaGACTCTGTGGTGTAGATAT +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLTGSLW*TLWCRY
Trigger: ATATCTACACCACAGAGTCCACCACAGGGAACCTGT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTAGGAGTCCCAGACCTTaGTTTTTCAGACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIRSPRP*FFRQHA
Trigger: GGCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCT...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCATCTGTGAATTTCTGTaGTGTAAATACTCCCACTAT +
Preference number: 4 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFICEFL*CKYSHY
Trigger: ATAGTGGGAGTATTTACACCACAGAAATTCACAGAT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTTCTCCTCCATGTTGCTaGAGAGTAAGAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFISPPCC*RVRRSP
Trigger: TGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGA...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTACAGGTTCCCTGTGGTaGACTCTGTGGTGTAGATAT +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFITGSLW*TLWCRY
Trigger: ATATCTACACCACAGAGTCCACCACAGGGAACCTGT...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAAGTGGAATCACCCATaGCAATTTGTCATATTTGTC +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAKWNHP*QFVIFV
Trigger: GACAAATATGACAAATTGTCATGGGTGATTCCACTT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR TCA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGCTTTGGGTGTATTTTTaGAAGTCACTTTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRLWVYF*KSLWFL
Trigger: GAGAAACCAAAGTGACTTTCAAAAATACACCCAAAG...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAAAAAGCGAAAGCTGTaGTTTATAGCATCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAKKRKL*FIASVN
Trigger: ATTCACAGATGCTATAAAGCACAGCTTTCGCTTTTT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTGGTTGGAAAAGTTTTTaGGGAATGAAACCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIGWKSF*GMKPGK
Trigger: CTTCCCAGGTTTCATTCCCCAAAAACTTTTCCAACC...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGCTTTGGGTGTATTTTTaGAAGTCACTTTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLLWVYF*KSLWFL
Trigger: GAGAAACCAAAGTGACTTTCAAAAATACACCCAAAG...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR TCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTATCCCCAGATTTTTGTaGTACTTTCAAGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIIPRFL*YFQAVK
Trigger: TTTCACTGCTTGAAAGTATCACAAAAATCTGGGGAT...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR GCA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAAAAAGCGAAAGCTGTaGTTTATAGCATCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLKKRKL*FIASVN
Trigger: ATTCACAGATGCTATAAAGCACAGCTTTCGCTTTTT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CCA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTATCTGTGAATTTCTGTaGTGTAAATACTCCCACTAT +
Preference number: 4 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIICEFL*CKYSHY
Trigger: ATAGTGGGAGTATTTACACCACAGAAATTCACAGAT...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS GCA 90 bp GGAGCGGGCATGGCAGGTCAGACGCACGCTCATGCTGTGCACCCGTaGCCAGCGGTCCTGGGCCAGCTTCTGCCCGATCCTGCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GAGMAGQTHAHAVHP*PAVLGQLLPDPAQL
Trigger: GAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGACCTGCCATGCCCGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp CTGACCATGGAGCGGGCATGGCAGGTCAGACGCACGCTCATGCTGTaGACCCGTGCCCAGCGGTCCTGGGCCAGCTTCTGCCCGATCCTG +
Preference number: 5 (lower is better)
Translates to: LTMERAWQVRRTLML*TRAQRSWASFCPIL
Trigger: CAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp CCAGCTGGTGGACACCCTCTTCCACGCAGCAGATGGAGGCCAGCGTaGGGAGCGCCTGGGGGTACAAGCACCGGAAACTGTCCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: PAGGHPLPRSRWRPA*GAPGGTSTGNCPAG
Trigger: GCCGGCAGGACAGTTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCTGCTGCGTGGAAGAGGGTGTCCACCAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp AAGCTACTGAGGTGCTGGGTGACGGGCAGGTGTGGGGAGGTGACCTaGGCCACCACAGCCGCAGCCTCAGCCCGTGTGGCCTCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: KLLRCWVTGRCGEVT*ATTAAASARVASEW
Trigger: CCACTCAGAGGCCACACGGGCTGAGGCTGCGGCTGTGGTGGCCCAGGTCACCTCCCCACACCTGCCCGTCACCCAGCACCTCAGTAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp GAGCTCGATGAGACGGGACATGCAGCTGAGCCGCACGGCCTCCCGTaGCACATCTGGGTCTCGGCTGAGACGAGCCAGGGTCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: ELDETGHAAEPHGLP*HIWVSAETSQGHCS
Trigger: GCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGGCTCAGCTGCATGTCCCGTCTCATCGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp CCGTTTGAGCAGCAGCTGCAGGGGGTCTCCAGGGCCAGGGCCACCTaGCAGGATGAGGTCACCCTGTGCATCCTCTTCCAGGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: PFEQQLQGVSRARAT*QDEVTLCILFQADG
Trigger: CCCATCAGCCTGGAAGAGGATGCACAGGGTGACCTCATCCTGGCAGGTGGCCCTGGCCCTGGAGACCCCCTGCAGCTGCTGCTCAAACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp CAGGTCAGACGCACGCTCATGCTGTGCACCCGTGCCCAGCGGTCCTaGGCCAGCTTCTGCCCGATCCTGCGCAGCTCTGTGCTAATGACC +
Preference number: 5 (lower is better)
Translates to: QVRRTLMLCTRAQRS*ASFCPILRSSVLMT
Trigger: GGTCATTAGCACAGAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp ACCTGGGCCACCACAGCCGCAGCCTCAGCCCGTGTGGCCTCTGAGTaGCTGTTGTCGGTCAGGATGTCGGCCAAGCACAGAACGCCATCC +
Preference number: 5 (lower is better)
Translates to: TWATTAAASARVASE*LLSVRMSAKHRTPS
Trigger: GGATGGCGTTCTGTGCTTGGCCGACATCCTGACCGACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTGCGGCTGTGGTGGCCCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp GAGACGGGACATGCAGCTGAGCCGCACGGCCTCCCGTGCCACATCTaGGTCTCGGCTGAGACGAGCCAGGGTCACTGCAGCTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: ETGHAAEPHGLPCHI*VSAETSQGHCSFLL
Trigger: CAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGGCTCAGCTGCATGTCCCGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp ACGCTCATGCTGTGCACCCGTGCCCAGCGGTCCTGGGCCAGCTTCTaGCCGATCCTGCGCAGCTCTGTGCTAATGACCCAACCCCGTTTG +
Preference number: 5 (lower is better)
Translates to: TLMLCTRAQRSWASF*PILRSSVLMTQPRL
Trigger: CAAACGGGGTTGGGTCATTAGCACAGAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp GCCAGCGTGCGGAGCGCCTGGGGGTACAAGCACCGGAAACTGTCCTaGCGGCAAACCTTGAAGAGTGCTACGACCCCACCCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ASVRSAWGYKHRKLS*RQTLKSATTPPSLA
Trigger: AGCCAAGGAGGGTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp GAGTTCCTGCTGACAGCACTGTACTCGCTGACCATGGAGCGGGCATaGCAGGTCAGACGCACGCTCATGCTGTGCACCCGTGCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: EFLLTALYSLTMERA*QVRRTLMLCTRAQR
Trigger: CCGCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGGTCAGCGAGTACAGTGCTGTCAGCAGGAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp GCTGTCACGATCTCCTCCATGCTCTCCAGGAAGCTACTGAGGTGCTaGGTGACGGGCAGGTGTGGGGAGGTGACCTGGGCCACCACAGCC +
Preference number: 5 (lower is better)
Translates to: AVTISSMLSRKLLRC*VTGRCGEVTWATTA
Trigger: GGCTGTGGTGGCCCAGGTCACCTCCCCACACCTGCCCGTCACCCAGCACCTCAGTAGCTTCCTGGAGAGCATGGAGGAGATCGTGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp CTCCCGTGCCACATCTGGGTCTCGGCTGAGACGAGCCAGGGTCACTaGAGCTTTCTGCTGGACTCGCTCACAGGCTGCCACTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LPCHIWVSAETSQGH*SFLLDSLTGCHFSR
Trigger: CCTGCTGAAGTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp ACACCCTCTTCCACGCAGCAGATGGAGGCCAGCGTGCGGAGCGCCTaGGGGTACAAGCACCGGAAACTGTCCTGCCGGCAAACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TPSSTQQMEASVRSA*GYKHRKLSCRQTLK
Trigger: CTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCTGCTGCGTGGAAGAGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp CTGACCCGGCAGGGTGACGGAGTCCAGGTGGCGACCTCCAGGCAGTaGCATCATGTTGATCCCAATCTGCAGCAAAGCCTGCTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LTRQGDGVQVATSRQ*HHVDPNLQQSLLAA
Trigger: CGCTGCAAGCAGGCTTTGCTGCAGATTGGGATCAACATGATGGCACTGCCTGGAGGTCGCCACCTGGACTCCGTCACCCTGCCGGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 90 bp AGCAGCCAGGCAGGCCACAAGCACGGCGTCACTGCTGTTCCTCTCTaGTGGGGATCTGCAGAGCTCGATGAGACGGGACATGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SSQAGHKHGVTAVPL*WGSAELDETGHAAE
Trigger: CTCAGCTGCATGTCCCGTCTCATCGAGCTCTGCAGATCCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTGTGGCCTGCCTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000530161.5
CDS GCA 90 bp ACATCTGGGTCTCGGCTGAGACGAGCCAGGGTCACTGCAGCTTTCTaGTGGACTCGCTCACAGGCTGCCACTTCAGCAGGAGTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: TSGSRLRRARVTAAF*WTRSQAATSAGVPD
Trigger: GTCTGGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 90 bp TCTGGGTCTCGGCTGAGACGAGCCAGGGTCACTGCAGCTTTCTGCTaGACTCGCTCACAGGCTGCCACTTCAGCAGGAGTCCCAGACCTT +
Preference number: 5 (lower is better)
Translates to: SGSRLRRARVTAAFC*TRSQAATSAGVPDL
Trigger: AAGGTCTGGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 90 bp CATAGCCAGGCAGGCCACAAGCACGGCGTCACTGCTGTTCCTCTCTaGTGGGGATCTGCAGAGCTCGATGAGACGGGACATGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: HSQAGHKHGVTAVPL*WGSAELDETGHAAE
Trigger: CTCAGCTGCATGTCCCGTCTCATCGAGCTCTGCAGATCCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTGTGGCCTGCCTGGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS GCA 90 bp GTGTCAGGGCCAGCTCCAGCAGCTGACCAAAGTGCTGGCCCAGCATaGTCAGGGTCTCACTCACGCAGGCCTTCATTGACTTCAGGACAT +
Preference number: 5 (lower is better)
Translates to: VSGPAPAADQSAGPA*SGSHSRRPSLTSGH
Trigger: ATGTCCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCATGCTGGGCCAGCACTTTGGTCAGCTGCTGGAGCTGGCCCTGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS-3UTR CAA 90 bp CCAGCCGAGGCTGGACCAACTGCTGAAAGTCAGAGTCCTGGAGGCCTTCAGGGCTCACGCAGGCCTTCATaGACTTCAGGACATGCTCAT +
Preference number: 5 (lower is better)
Translates to: PAEAGPTAESQSPGGLQGSRRPS*TSGHAH
Trigger: ATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTGA...GCCCTGAAGGCCTCCAGGACTCTGACTTTCAGCAGTTGGTCCAGCCTCGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS GCA 90 bp ACGAGCCAGGGTCACTGCAGCTTTCTGCTGGACTCGCTCACAGGCTaGCACTTCAGCAGGAGTCCCAGACCTTGGTTTTTCAGACAGCAT +
Preference number: 5 (lower is better)
Translates to: TSQGHCSFLLDSLTG*HFSRSPRPWFFRQH
Trigger: ATGCTGTCTGAAAAACCAAGGTCTGGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 90 bp GTGCTGGCCCAGCATGCTCAGGGTCTCACTCACGCAGGCCTTCATTaGCTTCAGGACATGCTCATTCTCAACCTGAAGGCACCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: VLAQHAQGLTHAGLH*LQDMLILNLKAPLC
Trigger: ACAGAGAGGTGCCTTCAGGTTGAGAATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCATGCTGGGCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 90 bp CATTCAACTGCAGGAGCATCTCGCAGGCCATTGTGTCAAAGAACGTaGTGTTGGCAAGGGCCGCAGAGGCCAGTAGGAAGACTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: HSTAGASRRPLCQRT*CWQGPQRPVGRLPL
Trigger: CAGGGGAAGTCTTCCTACTGGCCTCTGCGGCCCTTGCCAACATCACGTTCTTTGACACAATGGCCTGCGAGATGCTCCTGCAGTTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 90 bp CAATCTGGTCCCGAGTGTAAGGCGTGTCCACTCTCTGCTTGTCACTaGAGGCTTCCAGGAGAACACGGATGGCATTCAACTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: QSGPECKACPLSACH*RLPGEHGWHSTAGA
Trigger: TGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGGAAGCCTGCAGTGACAAGCAGAGAGTGGACACGCCTTACACTCGGGACCAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS-3UTR CAA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGTCCAGGCTGATGGGCTaGGCCTGCAGGACACACATG +
Preference number: 5 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVSRLMG*ACRTHM
Trigger: CATGTGTGTCCTGCAGGCCAAGCCCATCAGCCTGGA...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGGCCTCTGAGTGGCTGTaGTCGGTCAGGATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMASEWL*SVRMSA
Trigger: GGCCGACATCCTGACCGACAACAGCCACTCAGAGGC...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAACGACCCCACCCTCCTaGGCTATGATGCGGCACAAG +
Preference number: 5 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQTTPPS*AMMRHK
Trigger: CTTGTGCCGCATCATAGCCAAGGAGGGTGGGGTCGT...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS CCA 90 bp TGTCCACTCTCTGCTTGTCACTGCAGGCTTCCAGGAGAACACGGATaGCATTCAACTGCAGGAGCATCTCGCAGGCCATTGTGTCAAAGA +
Preference number: 5 (lower is better)
Translates to: CPLSACHCRLPGEHG*HSTAGASRRPLCQR
Trigger: TCTTTGACACAATGGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGGAAGCCTGCAGTGACAAGCAGAGAGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS-3UTR CAA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGTCCTGCCGGCAAACCTaGAAGAGTGCTACGACCCCA +
Preference number: 5 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGSCRQT*KSATTP
Trigger: TGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGA...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS GCA 90 bp TGCTTGTCACTGCAGGCTTCCAGGAGAACACGGATGGCATTCAACTaGAGGAGCATCTCGCAGGCCATTGTGTCAAAGAACGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: CLSLQASRRTRMAFN*RSISQAIVSKNVML
Trigger: CAACATCACGTTCTTTGACACAATGGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGGAAGCCTGCAGTGACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS-3UTR CAA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCACGACCCCACCCTCCTaGGCTATGATGCGGCACAAG +
Preference number: 5 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFTTPPS*AMMRHK
Trigger: CTTGTGCCGCATCATAGCCAAGGAGGGTGGGGTCGT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGGCCTCTTGGCACAGTTaGACGAGGGCTGTCACGATC +
Preference number: 5 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKASWHS*TRAVTI
Trigger: GATCGTGACAGCCCTCGTCAAACTGTGCCAAGAGGC...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp ATGGCCAATTTCAACATGAGGGCTCATGAAGTAGCTCATGGCTACCAACGCAAGTCAAAGAACGTGATGTaGGCAAGGGCCGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: MANFNMRAHEVAHGYQRKSKNVM*ARAAEA
Trigger: GGCCTCTGCGGCCCTTGCCAACATCACGTTCTTTGA...CTTGCGTTGGTAGCCATGAGCTACTTCATGAGCCCTCATGTTGAAATTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS TCA 90 bp GCTGAACAGGTTCCCTGTGGTGGACTCTGTGGTGTAGATATTGTCTaGGGCATCAATTTTTCTCACCAGTGCCTGAACCTCCCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: AEQVPCGGLCGVDIV*GINFSHQCLNLPCQ
Trigger: CTGACACGGGAGGTTCAGGCACTGGTGAGAAAAATTGATGCCTCAGACAATATCTACACCACAGAGTCCACCACAGGGAACCTGTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS-3UTR CAA 90 bp GAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGGGCAGTGCCATCATGTaGATCCCAATCTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: ESWYVLRCVHWCIVRGGVGSAIM*IPICSK
Trigger: TTTGCTGCAGATTGGGATCAACATGATGGCACTGCC...CACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAGCCTCTTGGCACAGTTaGACGAGGGCTGTCACGATC +
Preference number: 5 (lower is better)
Translates to: ISSPTLTTQNSPPCCCRVASWHS*TRAVTI
Trigger: GATCGTGACAGCCCTCGTCAAACTGTGCCAAGAGGC...TACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CAA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTTCAAAGAACGTGATGTaGGCAAGGGCCGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISSKNVM*ARAAEA
Trigger: GGCCTCTGCGGCCCTTGCCAACATCACGTTCTTTGA...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACTCAAAGAACGTGATGTaGGCAAGGGCCGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHSKNVM*ARAAEA
Trigger: GGCCTCTGCGGCCCTTGCCAACATCACGTTCTTTGA...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAACAGGAGTCCCAGACCTaGGTTTTTCAGACAGCATGC +
Preference number: 5 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQQESQT*VFQTAC
Trigger: GCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCTG...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp TGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAATCACGCAGGCCTTCATaGACTTCAGGACATGCTCAT +
Preference number: 5 (lower is better)
Translates to: CTQMCSLVHSQRGCENSQSRRPS*TSGHAH
Trigger: ATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTGA...TTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAGCCTCTGAGTGGCTGTaGTCGGTCAGGATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAASEWL*SVRMSA
Trigger: GGCCGACATCCTGACCGACAACAGCCACTCAGAGGC...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp TGTGAGAACAGCCAAATGTATTTCTTCGCCCACACTCACTACACAAAACTCTCCTCAAAGAACGTGATGTaGGCAAGGGCCGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: CENSQMYFFAHTHYTKLSSKNVM*ARAAEA
Trigger: GGCCTCTGCGGCCCTTGCCAACATCACGTTCTTTGA...GGAGAGTTTTGTGTAGTGAGTGTGGGCGAAGAAATACATTTGGCTGTTCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CAA 90 bp TGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCTCAGGAGTCCCAGACCTaGGTTTTTCAGACAGCATGC +
Preference number: 5 (lower is better)
Translates to: CVHWCIVRGGVRTAKCISQESQT*VFQTAC
Trigger: GCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCTG...AGAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACTCACGCAGGCCTTCATaGACTTCAGGACATGCTCAT +
Preference number: 5 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHSRRPS*TSGHAH
Trigger: ATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTGA...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGTCCTGCCGGCAAACCTaGAAGAGTGCTACGACCCCA +
Preference number: 5 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRSCRQT*KSATTP
Trigger: TGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGA...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATCCTGCCGGCAAACCTaGAAGAGTGCTACGACCCCA +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGASCRQT*KSATTP
Trigger: TGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGA...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGGCCTCTGAGTGGCTGTaGTCGGTCAGGATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLASEWL*SVRMSA
Trigger: GGCCGACATCCTGACCGACAACAGCCACTCAGAGGC...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAGCCTCTTGGCACAGTTaGACGAGGGCTGTCACGATC +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAASWHS*TRAVTI
Trigger: GATCGTGACAGCCCTCGTCAAACTGTGCCAAGAGGC...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGCTAGGACAGACATGTTaGCCAAGATGGTCACAATCT +
Preference number: 5 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGLGQTC*PRWSQS
Trigger: AGATTGTGACCATCTTGGCAAACATGTCTGTCCTAG...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGCTAGGACAGACATGTTaGCCAAGATGGTCACAATCT +
Preference number: 5 (lower is better)
Translates to: TQMCSLVHSQRGCENSQMLGQTC*PRWSQS
Trigger: AGATTGTGACCATCTTGGCAAACATGTCTGTCCTAG...CATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACATCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAAGAAGGAGTCCACCAGCCCTAGGACAGACATGTTaGCCAAGATGGTCACAATCT +
Preference number: 5 (lower is better)
Translates to: TTQNSPPCCCRVRRSPPALGQTC*PRWSQS
Trigger: AGATTGTGACCATCTTGGCAAACATGTCTGTCCTAG...GGCTGGTGGACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CAA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTGCCTCTGAGTGGCTGTaGTCGGTCAGGATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIASEWL*SVRMSA
Trigger: GGCCGACATCCTGACCGACAACAGCCACTCAGAGGC...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ATGTGTTCACTGGTGCATAGTCAGAGGGGGTGTGAGAACAGCCAAATGTATTTCAAACTCTCCTCCATGTaGCTGCAGAGTAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: MCSLVHSQRGCENSQMYFKLSSM*LQSKKE
Trigger: CTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTT...GAAATACATTTGGCTGTTCTCACACCCCCTCTGACTATGCACCAGTGAACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp GATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATAGTCAGAGGGAAACTTGCTAGGCAGTaGAAATCCTCTGGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: DEESWYVLRCVHWCIVRGKLARQ*KSSGSK
Trigger: TTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTTT...CCCTCTGACTATGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGGGGTTTCTGGTGCCTTaGGGTGTATTTTTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELGFLVP*GVFLKV
Trigger: GACTTTCAAAAATACACCCAAAGGCACCAGAAACCC...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGGCCTCTTGGCACAGTTaGACGAGGGCTGTCACGATC +
Preference number: 5 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLASWHS*TRAVTI
Trigger: GATCGTGACAGCCCTCGTCAAACTGTGCCAAGAGGC...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCACAGGAGTCCCAGACCTaGGTTTTTCAGACAGCATGC +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAQESQT*VFQTAC
Trigger: GCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCTG...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp CCCACACTCACTACACAAAACTCTCCTCCATGTTGCTGCAGAGTAAGAAGGAGTAAACTTGCTAGGCAGTaGAAATCCTCTGGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: PTLTTQNSPPCCCRVRRSKLARQ*KSSGSK
Trigger: TTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTTT...ACTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528567.5
CDS-3UTR CAA 90 bp GAAGCCAAAGGAAGCAGGGTTTCTGGTGCCTTTGGGTGTATTTTTGAAAGTCACGGGTTTCTGGTGCCTTaGGGTGTATTTTTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: EAKGSRVSGAFGCIFESHGFLVP*GVFLKV
Trigger: GACTTTCAAAAATACACCCAAAGGCACCAGAAACCC...GTGACTTTCAAAAATACACCCAAAGGCACCAGAAACCCTGCTTCCTTTGGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGGGCAGTGCCATCATGTaGATCCCAATCTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRGSAIM*IPICSK
Trigger: TTTGCTGCAGATTGGGATCAACATGATGGCACTGCC...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAGGCAGTGCCATCATGTaGATCCCAATCTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAGSAIM*IPICSK
Trigger: TTTGCTGCAGATTGGGATCAACATGATGGCACTGCC...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp TGCAGAGTTAGGAAGAAATTCTCACAGTTGTCCCTTGTGAGTGGGCATGAGCTGTTTCAAGCAGTGAAATaGGTAAACCAGCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: CRVRKKFSQLSLVSGHELFQAVK*VNQLSL
Trigger: TAGAGAGAGCTGGTTTACCAATTTCACTGCTTGAAA...CAGCTCATGCCCACTCACAAGGGACAACTGTGAGAATTTCTTCCTAACTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp TTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAGGATTCTATTCACCAGGAAACTCTCCTCCATGTaGCTGCAGAGTAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LRRNQSFNKPHLRILFTRKLSSM*LQSKKE
Trigger: CTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTT...CCTGGTGAATAGAATCCTCAGATGAGGCTTATTGAATGATTGATTCCTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCAGGAGTCCCAGACCTaGGTTTTTCAGACAGCATGC +
Preference number: 5 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIQESQT*VFQTAC
Trigger: GCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCTG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAGGGTTTCTGGTGCCTTaGGGTGTATTTTTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAGFLVP*GVFLKV
Trigger: GACTTTCAAAAATACACCCAAAGGCACCAGAAACCC...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTGGCAGTGCCATCATGTaGATCCCAATCTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: KDQRLFDDVALRFCPPFIGSAIM*IPICSK
Trigger: TTTGCTGCAGATTGGGATCAACATGATGGCACTGCC...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp CTGCTTTCAAGTATACTTTTGAGGAGGAATCAATCATTCAATAAGCCTCATCTGAAACTCTCCTCCATGTaGCTGCAGAGTAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LLSSILLRRNQSFNKPHLKLSSM*LQSKKE
Trigger: CTCCTTCTTACTCTGCAGCAACATGGAGGAGAGTTT...CAGATGAGGCTTATTGAATGATTGATTCCTCCTCAAAAGTATACTTGAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCAAAACTTGCTAGGCAGTaGAAATCCTCTGGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAKLARQ*KSSGSK
Trigger: TTTGGAACCAGAGGATTTCAACTGCCTAGCAAGTTT...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS-3UTR CAA 90 bp ATAAATAAGAAGATGAGGAGAGCTGGTATGTACTCAGATGTGTTCACTGGTGCATTTCAAGCAGTGAAATaGGTAAACCAGCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: INKKMRRAGMYSDVFTGAFQAVK*VNQLSL
Trigger: TAGAGAGAGCTGGTTTACCAATTTCACTGCTTGAAA...TGCACCAGTGAACACATCTGAGTACATACCAGCTCTCCTCATCTTCTTATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
CDS-3UTR CAA 90 bp AAGGACCAAAGACTGTTTGATGATGTTGCTCTAAGATTTTGTCCTCCATTTATTCTAGGACAGACATGTTaGCCAAGATGGTCACAATCT +
Preference number: 5 (lower is better)
Translates to: KDQRLFDDVALRFCPPFILGQTC*PRWSQS
Trigger: AGATTGTGACCATCTTGGCAAACATGTCTGTCCTAG...AATAAATGGAGGACAAAATCTTAGAGCAACATCATCAAACAGTCTTTGGTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
CDS CCA 72 bp CGTGCGAGACAGGCTGGTAGTGCGAGCGGCCAGTGGTaGCGGGGCGCAGCTGGAGCTCCAGAGGCCGCGCGC +
Preference number: 6 (lower is better)
Translates to: RARQAGSASGQW*RGAAGAPEAAR
Trigger: GCGCGCGGCCTCTGGAGCTCCAGCTGCGCCCCGCCACCACTGGCCGCTCGCACTACCAGCCTGTCTCGCACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379556.8
CDS GCA 72 bp GAGCGGGCATGGCAGGTCAGACGCACGCTCATGCTGTaGACCCGTGCCCAGCGGTCCTGGGCCAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ERAWQVRRTLML*TRAQRSWASFC
Trigger: GCAGAAGCTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGACCTGCCATGCCCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp CCATGGAGCGGGCATGGCAGGTCAGACGCACGCTCATaGTGTGCACCCGTGCCCAGCGGTCCTGGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: PWSGHGRSDARS*CAPVPSGPGPA
Trigger: AGCTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 72 bp CCACCTGCATCAGGTGTAGCCGCTGACCCGGCAGGGTaGCGGAGTCCAGGTGGCGACCTCCAGGCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: PPASGVAADPAG*RSPGGDLQAVP
Trigger: TGGCACTGCCTGGAGGTCGCCACCTGGACTCCGTCACCCTGCCGGGTCAGCGGCTACACCTGATGCAGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp GAGACGGGACATGCAGCTGAGCCGCACGGCCTCCCGTaGCACATCTGGGTCTCGGCTGAGACGAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: ETGHAAEPHGLP*HIWVSAETSQG
Trigger: ACCCTGGCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGGCTCAGCTGCATGTCCCGTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp CATGCAGCTGAGCCGCACGGCCTCCCGTGCCACATCTaGGTCTCGGCTGAGACGAGCCAGGGTCACTGCAGC +
Preference number: 6 (lower is better)
Translates to: HAAEPHGLPCHI*VSAETSQGHCS
Trigger: GCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGGCTCAGCTGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 72 bp GCCGCACGGCCTCCCGTGCCACATCTGGGTCTCGGCTaGGACGAGCCAGGGTCACTGCAGCTTTCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: AARPPVPHLGLG*DEPGSLQLSAG
Trigger: TCCAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATGTGGCACGGGAGGCCGTGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp ATGGCAGGTCAGACGCACGCTCATGCTGTGCACCCGTaGCCAGCGGTCCTGGGCCAGCTTCTGCCCGATCCT +
Preference number: 6 (lower is better)
Translates to: MAGQTHAHAVHP*PAVLGQLLPDP
Trigger: AGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACGGGTGCACAGCATGAGCGTGCGTCTGACCTGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp TCCACGCAGCAGATGGAGGCCAGCGTGCGGAGCGCCTaGGGGTACAAGCACCGGAAACTGTCCTGCCGGCAA +
Preference number: 6 (lower is better)
Translates to: STQQMEASVRSA*GYKHRKLSCRQ
Trigger: TTGCCGGCAGGACAGTTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCTGCTGCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp AGGGCCAGGGCCACCTGCCAGGATGAGGTCACCCTGTaGATCCTCTTCCAGGCTGATGGGCTTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: RARATCQDEVTL*ILFQADGLGLQ
Trigger: CTGCAGGCCAAGCCCATCAGCCTGGAAGAGGATGCACAGGGTGACCTCATCCTGGCAGGTGGCCCTGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp CTGTGCACCCGTGCCCAGCGGTCCTGGGCCAGCTTCTaGCCGATCCTGCGCAGCTCTGTGCTAATGACCCAA +
Preference number: 6 (lower is better)
Translates to: LCTRAQRSWASF*PILRSSVLMTQ
Trigger: TTGGGTCATTAGCACAGAGCTGCGCAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCACGGGTGCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp GGACACCCTCTTCCACGCAGCAGATGGAGGCCAGCGTaGGGAGCGCCTGGGGGTACAAGCACCGGAAACTGT +
Preference number: 6 (lower is better)
Translates to: GHPLPRSRWRPA*GAPGGTSTGNC
Trigger: ACAGTTTCCGGTGCTTGTACCCCCAGGCGCTCCGCACGCTGGCCTCCATCTGCTGCGTGGAAGAGGGTGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS CAA 72 bp GCCGCAGCCTCAGCCCGTGTGGCCTCTGAGTGGCTGTaGTCGGTCAGGATGTCGGCCAAGCACAGAACGCCA +
Preference number: 6 (lower is better)
Translates to: AAASARVASEWL*SVRMSAKHRTP
Trigger: TGGCGTTCTGTGCTTGGCCGACATCCTGACCGACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CAA 90 bp GCCACCACAGCCGCAGCCTCAGCCCGTGTGGCCTCTGAGTGGCTGTaGTCGGTCAGGATGTCGGCCAAGCACAGAACGCCATCCACCTTC +
Preference number: 6 (lower is better)
Translates to: ATTAAASARVASEWL*SVRMSAKHRTPSTF
Trigger: GAAGGTGGATGGCGTTCTGTGCTTGGCCGACATCCTGACCGACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTGCGGCTGTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS CAA 90 bp GCCACCACAGCCGCAGCCTCAGCCCGTGTGGCCTCTGAGTGGCTGTaGTCGGTCAGGATGTCGGCCAAGCACAGAACGCCATCCACCTTG +
Preference number: 6 (lower is better)
Translates to: ATTAAASARVASEWL*SVRMSAKHRTPSTL
Trigger: CAAGGTGGATGGCGTTCTGTGCTTGGCCGACATCCTGACCGACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTGCGGCTGTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447214.6
ENST00000525218.1
CDS GCA 72 bp CGGAGCGCCTGGGGGTACAAGCACCGGAAACTGTCCTaGCGGCAAACCTTGAAGAGTGCTACGACCCCACCC +
Preference number: 6 (lower is better)
Translates to: RSAWGYKHRKLS*RQTLKSATTPP
Trigger: GGGTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTGCTTGTACCCCCAGGCGCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp ACCACAGCCGCAGCCTCAGCCCGTGTGGCCTCTGAGTaGCTGTTGTCGGTCAGGATGTCGGCCAAGCACAGA +
Preference number: 6 (lower is better)
Translates to: TTAAASARVASE*LLSVRMSAKHR
Trigger: TCTGTGCTTGGCCGACATCCTGACCGACAACAGCCACTCAGAGGCCACACGGGCTGAGGCTGCGGCTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp ATCTCCTCCATGCTCTCCAGGAAGCTACTGAGGTGCTaGGTGACGGGCAGGTGTGGGGAGGTGACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: ISSMLSRKLLRC*VTGRCGEVTWA
Trigger: GGCCCAGGTCACCTCCCCACACCTGCCCGTCACCCAGCACCTCAGTAGCTTCCTGGAGAGCATGGAGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp CACATCTGGGTCTCGGCTGAGACGAGCCAGGGTCACTaGAGCTTTCTGCTGGACTCGCTCACAGGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: HIWVSAETSQGH*SFLLDSLTGCH
Trigger: GTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCGAGACCCAGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp GCAGAGCAGCCAGGCAGGCCACAAGCACGGCGTCACTaGTGTTCCTCTCTGATGGGGATCTGCAGAGCTCGA +
Preference number: 6 (lower is better)
Translates to: AEQPGRPQARRH*CSSLMGICRAR
Trigger: TCGAGCTCTGCAGATCCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTGTGGCCTGCCTGGCTGCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000530161.5
CDS CCA 72 bp CTGACAGCACTGTACTCGCTGACCATGGAGCGGGCATaGCAGGTCAGACGCACGCTCATGCTGTGCACCCGT +
Preference number: 6 (lower is better)
Translates to: LTALYSLTMERA*QVRRTLMLCTR
Trigger: ACGGGTGCACAGCATGAGCGTGCGTCTGACCTGCCATGCCCGCTCCATGGTCAGCGAGTACAGTGCTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp CGGCTGAGACGAGCCAGGGTCACTGCAGCTTTCTGCTaGACTCGCTCACAGGCTGCCACTTCAGCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: RLRRARVTAAFC*TRSQAATSAGV
Trigger: GACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS CAA 90 bp AGCGCCTGGGGGTACAAGCACCGGAAACTGTCCTGCCGGCAAACCTaGAAGAGTGCTACGACCCCACCCTCCTTGGCTATGATGCGGCAC +
Preference number: 6 (lower is better)
Translates to: SAWGYKHRKLSCRQT*KSATTPPSLAMMRH
Trigger: GTGCCGCATCATAGCCAAGGAGGGTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTGCTTGTACCCCCAGGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp TCTCGGCTGAGACGAGCCAGGGTCACTGCAGCTTTCTaGTGGACTCGCTCACAGGCTGCCACTTCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: SRLRRARVTAAF*WTRSQAATSAG
Trigger: TCCTGCTGAAGTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACCCTGGCTCGTCTCAGCCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp TCCTTGGCTATGATGCGGCACAAGGGAGCCCCCTCCTaGGTCAGGCTGAACAGGTTCCCTGTGGTGGACTCT +
Preference number: 6 (lower is better)
Translates to: SLAMMRHKGAPS*VRLNRFPVVDS
Trigger: AGAGTCCACCACAGGGAACCTGTTCAGCCTGACCCAGGAGGGGGCTCCCTTGTGCCGCATCATAGCCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp ACCTTGGCTATGATGCGGCACAAGGGAGCCCCCTCCTaGGTCAGGCTGAACAGGTTCCCTGTGGTGGACTCT +
Preference number: 6 (lower is better)
Translates to: TLAMMRHKGAPS*VRLNRFPVVDS
Trigger: AGAGTCCACCACAGGGAACCTGTTCAGCCTGACCCAGGAGGGGGCTCCCTTGTGCCGCATCATAGCCAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447214.6
ENST00000525218.1
CDS CAA 72 bp AGGTCACCCTGTGCATCCTCTTCCAGGCTGATGGGCTaGGCCTGCAGGACACACATGCACTCGCACTCGGTC +
Preference number: 6 (lower is better)
Translates to: RSPCASSSRLMG*ACRTHMHSHSV
Trigger: GACCGAGTGCGAGTGCATGTGTGTCCTGCAGGCCAAGCCCATCAGCCTGGAAGAGGATGCACAGGGTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 72 bp GCAGGCCACAAGCACGGCGTCACTGCTGTTCCTCTCTaGTGGGGATCTGCAGAGCTCGATGAGACGGGACAT +
Preference number: 6 (lower is better)
Translates to: AGHKHGVTAVPL*WGSAELDETGH
Trigger: ATGTCCCGTCTCATCGAGCTCTGCAGATCCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTGTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp CAGGGTGACGGAGTCCAGGTGGCGACCTCCAGGCAGTaGCATCATGTTGATCCCAATCTGCAGCAAAGCCTG +
Preference number: 6 (lower is better)
Translates to: QGDGVQVATSRQ*HHVDPNLQQSL
Trigger: CAGGCTTTGCTGCAGATTGGGATCAACATGATGGCACTGCCTGGAGGTCGCCACCTGGACTCCGTCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp CCAGCTCCAGCAGCTGACCAAAGTGCTGGCCCAGCATaGTCAGGGTCTCACTCACGCAGGCCTTCATTGACT +
Preference number: 6 (lower is better)
Translates to: PAPAADQSAGPA*SGSHSRRPSLT
Trigger: AGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCATGCTGGGCCAGCACTTTGGTCAGCTGCTGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp GCACCGGAAACTGTCCTGCCGGCAAACCTTGAAGAGTaGTACGACCCCACCCTCCTTGGCTATGATGCGGCA +
Preference number: 6 (lower is better)
Translates to: APETVLPANLEE*YDPTLLGYDAA
Trigger: TGCCGCATCATAGCCAAGGAGGGTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS CAA 72 bp GAGTCCAGGTGGCGACCTCCAGGCAGTGCCATCATGTaGATCCCAATCTGCAGCAAAGCCTGCTTGCAGCGG +
Preference number: 6 (lower is better)
Translates to: ESRWRPPGSAIM*IPICSKACLQR
Trigger: CCGCTGCAAGCAGGCTTTGCTGCAGATTGGGATCAACATGATGGCACTGCCTGGAGGTCGCCACCTGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 72 bp AGTCCAGGTGGCGACCTCCAGGCAGTGCCATCATGTTaGTCCCAATCTGCAGCAAAGCCTGCTTGCAGCGGT +
Preference number: 6 (lower is better)
Translates to: SPGGDLQAVPSC*SQSAAKPACSG
Trigger: ACCGCTGCAAGCAGGCTTTGCTGCAGATTGGGATCAACATGATGGCACTGCCTGGAGGTCGCCACCTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CAA 72 bp GGGTACAAGCACCGGAAACTGTCCTGCCGGCAAACCTaGAAGAGTGCTACGACCCCACCCTCCTTGGCTATG +
Preference number: 6 (lower is better)
Translates to: GYKHRKLSCRQT*KSATTPPSLAM
Trigger: CATAGCCAAGGAGGGTGGGGTCGTAGCACTCTTCAAGGTTTGCCGGCAGGACAGTTTCCGGTGCTTGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp GGTCACTGCAGCTTTCTGCTGGACTCGCTCACAGGCTaGCACTTCAGCAGGAGTCCCAGACCTTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: GHCSFLLDSLTG*HFSRSPRPWFF
Trigger: GAAAAACCAAGGTCTGGGACTCCTGCTGAAGTGGCAGCCTGTGAGCGAGTCCAGCAGAAAGCTGCAGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS CAA 90 bp AGTGCTGGCCCAGCATGCTCAGGGTCTCACTCACGCAGGCCTTCATaGACTTCAGGACATGCTCATTCTCAACCTGAAGGCACCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SAGPACSGSHSRRPS*TSGHAHSQPEGTSL
Trigger: CAGAGAGGTGCCTTCAGGTTGAGAATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCATGCTGGGCCAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CAA 90 bp AACTGCAGGAGCATCTCGCAGGCCATTGTGTCAAAGAACGTGATGTaGGCAAGGGCCGCAGAGGCCAGTAGGAAGACTTCCCCTGATGAG +
Preference number: 6 (lower is better)
Translates to: NCRSISQAIVSKNVM*ARAAEASRKTSPDE
Trigger: CTCATCAGGGGAAGTCTTCCTACTGGCCTCTGCGGCCCTTGCCAACATCACGTTCTTTGACACAATGGCCTGCGAGATGCTCCTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp TCTGCTTGTCACTGCAGGCTTCCAGGAGAACACGGATaGCATTCAACTGCAGGAGCATCTCGCAGGCCATTG +
Preference number: 6 (lower is better)
Translates to: SACHCRLPGEHG*HSTAGASRRPL
Trigger: CAATGGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGGAAGCCTGCAGTGACAAGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CAA 72 bp AGCATCTCGCAGGCCATTGTGTCAAAGAACGTGATGTaGGCAAGGGCCGCAGAGGCCAGTAGGAAGACTTCC +
Preference number: 6 (lower is better)
Translates to: SISQAIVSKNVM*ARAAEASRKTS
Trigger: GGAAGTCTTCCTACTGGCCTCTGCGGCCCTTGCCAACATCACGTTCTTTGACACAATGGCCTGCGAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp CTGCAGGCTTCCAGGAGAACACGGATGGCATTCAACTaGAGGAGCATCTCGCAGGCCATTGTGTCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: LQASRRTRMAFN*RSISQAIVSKN
Trigger: GTTCTTTGACACAATGGCCTGCGAGATGCTCCTGCAGTTGAATGCCATCCGTGTTCTCCTGGAAGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS CCA 72 bp CTCACAGGCTGCCACTTCAGCAGGAGTCCCAGACCTTaGTTTTTCAGACAGCATGCCCATGATAAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: LTGCHFSRSPRP*FFRQHAHDKLD
Trigger: GTCCAGCTTATCATGGGCATGCTGTCTGAAAAACCAAGGTCTGGGACTCCTGCTGAAGTGGCAGCCTGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000447214.6
ENST00000525218.1
ENST00000526102.1
ENST00000528567.5
ENST00000530161.5
CDS CAA 72 bp CCAGCATGCTCAGGGTCTCACTCACGCAGGCCTTCATaGACTTCAGGACATGCTCATTCTCAACCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: PACSGSHSRRPS*TSGHAHSQPEG
Trigger: GCCTTCAGGTTGAGAATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCATGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS TCA 72 bp CAGCATGCTCAGGGTCTCACTCACGCAGGCCTTCATTaGCTTCAGGACATGCTCATTCTCAACCTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: QHAQGLTHAGLH*LQDMLILNLKA
Trigger: TGCCTTCAGGTTGAGAATGAGCATGTCCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379554.7
ENST00000379556.8
ENST00000424273.5
ENST00000525218.1
ENST00000528567.5
ENST00000530161.5
CDS GCA 72 bp AAGGCAAGGCTGTTGTCCAGCCTCATTAGCAAGTTTTaGCAAATAGGAGAGTGGGTCTCCATCCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: KARLLSSLISKF*QIGEWVSILAS
Trigger: GGAAGCCAGGATGGAGACCCACTCTCCTATTTGGCAAAACTTGCTAATGAGGCTGGACAACAGCCTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447214.6
CDS CCA 72 bp TCCAGCCTCATTAGCAAGTTTTGCCAAATAGGAGAGTaGGTCTCCATCCTGGCTTCCCATTCCCTTCGCATC +
Preference number: 6 (lower is better)
Translates to: SSLISKFCQIGE*VSILASHSLRI
Trigger: GATGCGAAGGGAATGGGAAGCCAGGATGGAGACCCACTCTCCTATTTGGCAAAACTTGCTAATGAGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447214.6