RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INPPL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165458

Ensembl transcript IDs: ENST00000298229.7, ENST00000320683.7, ENST00000535985.1, ENST00000537656.1, ENST00000537755.1, ENST00000538339.1, ENST00000538751.5, ENST00000540329.5, ENST00000540973.1, ENST00000541303.5, ENST00000541544.1, ENST00000541752.1, ENST00000541756.5, ENST00000543234.1, ENST00000544806.1, ENST00000545355.5

Found 904 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCCTaGCGCCGTGCATCCCCAGAGCAGGGCAGCACAGACCAGGAGACA +
Preference number: 1 (lower is better)
Translates to: PCPGLRPARNLPPPP*RRASPEQGSTDQET
Trigger: TGTCTCCTGGTCTGTGCTGCCCTGCTCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR GCA 90 bp ACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTaGGAGGAACCTCCCTCCCCCACCCTGCCGCCGTGCATCCCCAGA +
Preference number: 1 (lower is better)
Translates to: TAQEAACKTLSRAET*EEPPSPTLPPCIPR
Trigger: TCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR TCA 90 bp CCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTaGGACCTGCGAGGAACCTCCCTCCCCCACCCTGCCGCCGTGCAT +
Preference number: 1 (lower is better)
Translates to: PYDCPGGCLQDPVPG*DLRGTSLPHPAAVH
Trigger: ATGCACGGCGGCAGGGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR GCA 90 bp CGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCCTGCCGCCGTaGATCCCCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAAC +
Preference number: 1 (lower is better)
Translates to: RAETCEEPPSPTLPP*IPRAGQHRPGDSEN
Trigger: GTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR TCA 90 bp CTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTaGAAGTGGGGGCCCAGACGTACCCAAATGGACCCCCACAGGCAC +
Preference number: 1 (lower is better)
Translates to: LLRCGSGPVEGRRNW*KWGPRRTQMDPHRH
Trigger: GTGCCTGTGGGGGTCCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR GCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTaGTTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGGCGTGAAGAC +
Preference number: 1 (lower is better)
Translates to: LLKTSRRNPYDCPGG*LQDPVPGVGSWRED
Trigger: GTCTTCACGCCAGCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR GCA 90 bp TGGGCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGG +
Preference number: 1 (lower is better)
Translates to: WALVAGRGSEFTASW*LRYHLLSCRVSRRR
Trigger: CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR CCA 90 bp AGCTGGGCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGG +
Preference number: 1 (lower is better)
Translates to: SWALVAGRGSEFTAS*CLRYHLLSCRVSRR
Trigger: CCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR TCA 90 bp CAGGACAGCACCAGAGTAACCAGGGTCCTCGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTA +
Preference number: 1 (lower is better)
Translates to: QDSTRVTRVLGNHGN*PSVLSLKGEGQDAL
Trigger: TAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACCGAGGACCCTGGTTACTCTGGTGCTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
3UTR GCA 90 bp TTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGGCGTGAAGACCACTaGACTTTGAGGAAGTTGATGTTGTCACTGCTCTGGGCATCATTC +
Preference number: 1 (lower is better)
Translates to: LQDPVPGVGSWREDH*TLRKLMLSLLWASF
Trigger: GAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGGGACAGGGTCTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR CCA 90 bp AATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTGGTAGCAGGGAGGGGCTCTGAGTTC +
Preference number: 1 (lower is better)
Translates to: NRQRDTALTLITFQP*GHSWALVAGRGSEF
Trigger: GAACTCAGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
3UTR GCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTaGCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCGTGGGCAGC +
Preference number: 1 (lower is better)
Translates to: IKLNLLKTSRRNPYD*PGGCLQDPVPGVGS
Trigger: GCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR CCA 90 bp CGTGAAGACCACTGCACTTTGAGGAAGTTGATGTTGTCACTGCTCTaGGCATCATTCTCAAAGCTCTTCTTGTATTCCTCCAGGCAGGTA +
Preference number: 1 (lower is better)
Translates to: REDHCTLRKLMLSLL*ASFSKLFLYSSRQV
Trigger: TACCTGCCTGGAGGAATACAAGAAGAGCTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACTCCCTCCCCCACCCTaGCGCCGTGCATCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRLPPPP*RRASPE
Trigger: CTCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAG...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACACCCCCAGCGGGGGTaGGGAGGTCTTAGCGGAGCT +
Preference number: 2 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKHPQRG*GGLSGA
Trigger: AGCTCCGCTAAGACCTCCCCACCCCCGCTGGGGGTG...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR TCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: PARSSGYSFISGRTPAPTSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCCCAGACGTACCCAAATaGACCCCCACAGGCACCCCT +
Preference number: 2 (lower is better)
Translates to: QARWKAAETGESGGPDVPPDVPK*TPTGTP
Trigger: AGGGGTGCCTGTGGGGGTCCATTTGGGTACGTCTGG...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCGGGCGTGGGCAGCTaGCGTGAAGACCACTGCACT +
Preference number: 2 (lower is better)
Translates to: DITPQPLRLPRRLLARPCPGVGS*REDHCT
Trigger: AGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGG...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR-3UTR CCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGGAGCTCCTCCGCTGTaGTTCAGGCCCGGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPGAPPL*FRPGGR
Trigger: CCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR TCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: DITPQPLRLPRRLLARPCSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR TCA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR-3UTR TCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTAGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: VQARWKAAETGESGGPDVGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR TCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: PSVLSLKGEGQDALIRALSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR TCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR TCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGTCCGCTATCACTTGCTaGGCTGCAGGGTGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RWKAAETGESGGPDVPKWSAITC*AAGCPE
Trigger: TTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGA...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541756.5
3UTR-3UTR GCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAATTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 2 (lower is better)
Translates to: RSSSAVVQARWKAAETGELGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: DALIRALQMIGQRGMQIPPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAGGCATTGCAAATGATTaGGCAGCGGGGAATGCAGAT +
Preference number: 2 (lower is better)
Translates to: RSSSAVVQARWKAAETGEGIAND*AAGNAD
Trigger: ATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCC...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGATTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 2 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRLGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTAATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: VQARWKAAETGESGGPDVITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAGGCATTGCAAATGATTaGGCAGCGGGGAATGCAGAT +
Preference number: 2 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRGIAND*AAGNAD
Trigger: ATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCC...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR CAA 90 bp GACCCTGTCCCGGGCGTGGGCAGCTGGCGTGAAGACCACTGCACTTaGAGGAAGTTGATGTTGTCACTGCTCTGGGCATCATTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: DPVPGVGSWREDHCT*RKLMLSLLWASFSK
Trigger: CTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGGGACAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR-3UTR GCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACGCAACCCTTACGACTaGCCAGGAGGCTGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: IEDITPQPLRLPRRLLARRNPYD*PGGCLQ
Trigger: TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCG...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTG +
Preference number: 2 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPEFTAS*CLRYHL
Trigger: CAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
3UTR CAA 90 bp CCGGGCGTGGGCAGCTGGCGTGAAGACCACTGCACTTTGAGGAAGTaGATGTTGTCACTGCTCTGGGCATCATTCTCAAAGCTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: PGVGSWREDHCTLRK*MLSLLWASFSKLFL
Trigger: CAAGAAGAGCTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: DALIRALQMIGQRGMQIPGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PINRQRDTALTLITFQPWPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
3UTR-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: PSVLSLKGEGQDALIRALITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTCCAGACGTACCCAAATaGACCCCCACAGGCACCCCT +
Preference number: 2 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSPDVPK*TPTGTP
Trigger: AGGGGTGCCTGTGGGGGTCCATTTGGGTACGTCTGG...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR TCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAATTAGGGCATTGCAAATaGTTGGGCAGCGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQLGHCK*LGSGEC
Trigger: GCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAA...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR GCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCTTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTG +
Preference number: 2 (lower is better)
Translates to: DALIRALQMIGQRGMQIPFTASW*LRYHLL
Trigger: CAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAA...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541756.5
3UTR-3UTR TCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR GCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACTTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 2 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHLGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR GCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCAATAATATTAAGGTaGTCTCCCTCCCCAGACCCA +
Preference number: 2 (lower is better)
Translates to: IEDITPQPLRLPRRLLARPIILR*SPSPDP
Trigger: TGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGG...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAATGTTGTCACTGCTCTaGGCATCATTCTCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: IEDITPQPLRLPRRLLARMLSLL*ASFSKL
Trigger: GAGCTTTGAGAATGATGCCCAGAGCAGTGACAACAT...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR-3UTR TCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAAAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR GCA 72 bp GGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCCTaGCGCCGTGCATCCCCAGAGCAGGGCAGCACAGAC +
Preference number: 3 (lower is better)
Translates to: GLRPARNLPPPP*RRASPEQGSTD
Trigger: GTCTGTGCTGCCCTGCTCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CAA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCTGCCCAGGAGGCTGCTaGCAAGACCCTGTCCCGGGC +
Preference number: 3 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTCPGGC*QDPVPG
Trigger: GCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCA...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR CCA 72 bp CGGGGGTGGGGAGGTCTTAGCGGAGCTCCTCCGCTGTaGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTG +
Preference number: 3 (lower is better)
Translates to: RGWGGLSGAPPL*FRPGGRPQKLV
Trigger: CACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACCTCCCCACCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR GCA 72 bp ACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTaGTTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: TSRRNPYDCPGG*LQDPVPGVGSW
Trigger: CCAGCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR-3UTR CAA 90 bp GCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: ASWCLRYHLLSCRVSRRRGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR TCA 72 bp TGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTaGAAGTGGGGGCCCAGACGTACCCAAATGGACCCC +
Preference number: 3 (lower is better)
Translates to: CGSGPVEGRRNW*KWGPRRTQMDP
Trigger: GGGGTCCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR GCA 72 bp GTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: VAGRGSEFTASW*LRYHLLSCRVS
Trigger: GGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR GCA 72 bp CCTGTCCCGGGCGTGGGCAGCTGGCGTGAAGACCACTaGACTTTGAGGAAGTTGATGTTGTCACTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: PVPGVGSWREDH*TLRKLMLSLLW
Trigger: CCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR CCA 72 bp TTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: LVAGRGSEFTAS*CLRYHLLSCRV
Trigger: CACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR-3UTR CAA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CAA 90 bp TTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGTTGAGGAAGTTGATGTaGTCACTGCTCTGGGCATCA +
Preference number: 3 (lower is better)
Translates to: LRLPRRLLARPCPGRGQLLRKLM*SLLWAS
Trigger: TGATGCCCAGAGCAGTGACAACATCAACTTCCTCAA...CAGCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR TCA 72 bp ACCAGAGTAACCAGGGTCCTCGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: TRVTRVLGNHGN*PSVLSLKGEGQ
Trigger: CTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACCGAGGACCCTGGTTACTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
3UTR TCA 72 bp CTTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGGCGTaGAGACCACTGCACTTTGAGGAAGTTGATGTTGTC +
Preference number: 3 (lower is better)
Translates to: LARPCPGRGQLA*RPLHFEEVDVV
Trigger: GACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGGGACAGGGTCTTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
3UTR TCA 72 bp AGTTCACAGCTTCGTGGTGCCTCCGCTATCACTTGCTaGGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAG +
Preference number: 3 (lower is better)
Translates to: SSQLRGASAITC*AAGCPEGGACE
Trigger: CTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
3UTR CCA 72 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTGGTAGCAGGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: RDTALTLITFQP*GHSWALVAGRG
Trigger: GCCCCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
3UTR GCA 72 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTaGCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGC +
Preference number: 3 (lower is better)
Translates to: NLLKTSRRNPYD*PGGCLQDPVPG
Trigger: GCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CAA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR-3UTR CAA 90 bp ATCCAAATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: IQIKLNLLKTSRRNPYDCGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...GCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTATTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298229.7
3UTR CCA 72 bp CACTGCACTTTGAGGAAGTTGATGTTGTCACTGCTCTaGGCATCATTCTCAAAGCTCTTCTTGTATTCCTCC +
Preference number: 3 (lower is better)
Translates to: HCTLRKLMLSLL*ASFSKLFLYSS
Trigger: GGAGGAATACAAGAAGAGCTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR TCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCGCCTGGGAGGAGCGCTaGGCGTGCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTAWEER*ACRPSR
Trigger: CCTGCTGGGCCTGCACGCTCAGCGCTCCTCCCAGGC...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCGCAGCCAGGCACTCATaGCTGCCTCGCCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTAARHS*LPRPAR
Trigger: GCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGC...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCCGAGGGTGCCGGTGGTaGCCAAGCTGTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSRGCRW*PSCGAG
Trigger: GCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCG...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGCTGGCCCGCCCGCCCTaGAGGCACGGAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLLARPP*RHGASS
Trigger: AGAGGAGGCTCCGTGCCTGCAGGGCGGGCGGGCCAG...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCGGGAGTCTCAGGAGCTaGCAGGGGACTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTGSLRS*QGTAGP
Trigger: GGGCCCAGCAGTCCCCTGCCAGCTCCTGAGACTCCC...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCTGCGGCTCCCTGACCTaGGCTCCTGGCTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLCGSLT*APGSLG
Trigger: CCCGAGGGAGCCAGGAGCCCAGGTCAGGGAGCCGCA...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCTCCGGGGGCAGCAGCTaGTGCGGGACCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTSGGSS*CGTPSR
Trigger: CCTTGAAGGGGTCCCGCACCAGCTGCTGCCCCCGGA...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCCTTGGGAGGTGGTaGGCCACGGGCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPGLGRW*ATGLSP
Trigger: GGGGCTGAGGCCCGTGGCCCACCACCTCCCAAGGCC...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCGGGGCCCGGGCTTaGGGATCCGTGGGCCGGACA +
Preference number: 4 (lower is better)
Translates to: INPSPVLGLFLHFRTDTRPGARA*GSVGRT
Trigger: TGTCCGGCCCACGGATCCTCAAGCCCGGGCCCCGGG...GCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298229.7
CDS-3UTR TCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCGGGCGTACAGGCCGATaGGCTCACCCAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSGRTGR*AHPGSG
Trigger: TCCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCC...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGCAGCCAGGCACTCATaGCTGCCTCGCCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLAARHS*LPRPAR
Trigger: GCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGC...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAACCCACCCTGCCGCCGTaGATCCCCAGAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGEPTLPP*IPRAGQ
Trigger: CTGCCCTGCTCTGGGGATGCACGGCGGCAGGGTGGG...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCGGCCTTACGTGTGGATaGCTGCGGAGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTGLTCG*LRSWGC
Trigger: GCACCCCCAGCTCCGCAGCCATCCACACGTAAGGCC...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
3UTR CAA 72 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTaGCAAGACCCTGTCCCGGGCGTGGGCAGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGC*QDPVPGVGSWR
Trigger: ACGCCAGCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR TCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCGTGCAGCCTCCGGCATaGGGTAGCGAGGGTACGGGT +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAVQPPA*GSEGTG
Trigger: ACCCGTACCCTCGCTACCTCATGCCGGAGGCTGCAC...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAGGCAGGAGGCCTCTGTaGAGGCTGGCTTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGEGRRPL*RLACGS
Trigger: GGAGCCGCAAGCCAGCCTTCACAGAGGCCTCCTGCC...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCCCAGGTCTTCCTGGATaGTCTCCCGGATGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSPGLPG*SPGCGV
Trigger: CACCCCGCATCCGGGAGAGCATCCAGGAAGACCTGG...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTCTGGCCCGCCCGCCCTaGAGGCACGGAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPLARPP*RHGASS
Trigger: AGAGGAGGCTCCGTGCCTGCAGGGCGGGCGGGCCAG...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCTGGCCCGCCCGCCCTaGAGGCACGGAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: INPSPVLGLFLHFRTDTRLARPP*RHGASS
Trigger: AGAGGAGGCTCCGTGCCTGCAGGGCGGGCGGGCCAG...GCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAACTCCCTCCCCCACCCTaGCGCCGTGCATCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKLPPPP*RRASPE
Trigger: CTCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAG...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCGCCCAGGAGGCTGCTTaGAAGACCCTGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLAQEAA*KTLSRA
Trigger: AGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGC...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCGCGCACACAAGGCCCTaGTTGGGCTGGGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPAHTRP*LGWAYR
Trigger: CCTGTACGCCCAGCCCAACCAGGGCCTTGTGTGCGC...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAGGGTACGGGTGAGGTaGGGCAGGTGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPRVRVR*GRWLAP
Trigger: TGGAGCCAGCCACCTGCCCCACCTCACCCGTACCCT...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCGGATGGCTGCGGAGCTaGGGGTGCTGTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSGWLRS*GCCGAH
Trigger: ATGAGCTCCACAGCACCCCCAGCTCCGCAGCCATCC...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCGTGGTCCAGTCCTCCTaGGAGTCCCGCTGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAVVQSS*ESRCLR
Trigger: GCGGAGACAGCGGGACTCCCAGGAGGACTGGACCAC...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCTGCCCAGGCGCTCCGTaGGCACCCGCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPCPGAP*APAPSW
Trigger: CCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCA...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTATGCGGCTCCCTGACCTaGGCTCCTGGCTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVCGSLT*APGSLG
Trigger: CCCGAGGGAGCCAGGAGCCCAGGTCAGGGAGCCGCA...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCGGCCGCCACCCCTTCTaGTTCAGGAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPGRHPF*FRSSLW
Trigger: CCAGAGGGAGCTCCTGAACCAGAAGGGGTGGCGGCC...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATGGCCTTGGGAGGTGGTaGGCCACGGGCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYGLGRW*ATGLSP
Trigger: GGGGCTGAGGCCCGTGGCCCACCACCTCCCAAGGCC...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCGGGCAGTGGAGGCCTTaGATGGGCCTTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLGQWRP*MGLGRW
Trigger: CCACCTCCCAAGGCCCATCCAAGGCCTCCACTGCCC...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCAGCGCTCCAAGCCGATaGCCCGCAGCCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: RLLARPCPGLRPARNLPPSAPSR*PAARHS
Trigger: TGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCT...GGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGCACCCCCAGCGGGGGTaGGGAGGTCTTAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLHPQRG*GGLSGA
Trigger: AGCTCCGCTAAGACCTCCCCACCCCCGCTGGGGGTG...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAAGACCCTGTCCCGGGCGTGGGCAGCTGGCGTGAAGACCACTGCACTTTGAGGACCCTGTCCCGGGCGTaGGCAGCTGGCGTGAAGACC +
Preference number: 4 (lower is better)
Translates to: QDPVPGVGSWREDHCTLRTLSRA*AAGVKT
Trigger: GGTCTTCACGCCAGCTGCCCACGCCCGGGACAGGGT...CCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGGGACAGGGTCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR TCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGGCGTACAGGCCGATaGGCTCACCCAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPGRTGR*AHPGSG
Trigger: TCCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCC...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCGGATGCGGTCGTGCGTaGAGGTGGTCCAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAGCGRA*RWSSPP
Trigger: AGGAGGACTGGACCACCTTCACGCACGACCGCATCC...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GCCTCCTCCAAGTCCTCCTCGGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGGCCTGGGAGGAGCGCTaGGCGTGCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASSKSSSVMSLRNSRSSQAWEER*ACRPSR
Trigger: CCTGCTGGGCCTGCACGCTCAGCGCTCCTCCCAGGC...CTGGGACGACCTGGAGTTTCTCAGTGACATCACCGAGGAGGACTTGGAGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR TCA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGTGGAGGGAAGCTaGGGGGCCGGCCATAGTCCG +
Preference number: 4 (lower is better)
Translates to: SSSAVVQARWKAAETGESGVEGS*GAGHSP
Trigger: CGGACTATGGCCGGCCCCTCAGCTTCCCTCCACCCC...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAAAGAAGGAGGCGCTTGTaGGCCGGGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKRRRRL*AGSCTP
Trigger: TGGGGTGCAGGACCCGGCTCACAAGCGCCTCCTTCT...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCTGCGGAGCTGGGGGTaGTGTGGAGCTCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLLARPCPGLRPARNLPPLRSWG*CGAHVL
Trigger: CAGGACATGAGCTCCACAGCACCCCCAGCTCCGCAG...GGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCCTGCGGAGCTGGGGGTaGTGTGGAGCTCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPLRSWG*CGAHVL
Trigger: CAGGACATGAGCTCCACAGCACCCCCAGCTCCGCAG...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATAGAGCCGCTCACGGGTaGCCAGGCGCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNRAAHG*PGAPWA
Trigger: TGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCT...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAACGAGGGTGCCGGTGGTaGCCAAGCTGTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKRGCRW*PSCGAG
Trigger: GCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCG...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTCCAGGCACTCATGCCTaGCTCGCCCAGCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPPGTHA*LAQPAG
Trigger: GCCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGG...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGCCCACCCTGCCGCCGTaGATCCCCAGAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWPTLPP*IPRAGQ
Trigger: CTGCCCTGCTCTGGGGATGCACGGCGGCAGGGTGGG...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCTCCCTCCCCCACCCTaGCGCCGTGCATCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCLPPPP*RRASPE
Trigger: CTCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAG...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAGGGCTTGAGGATCCGTaGGCCGGACAGAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRGLEDP*AGQSRG
Trigger: TCCCCGGCTCTGTCCGGCCCACGGATCCTCAAGCCC...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298229.7
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAGCTCACCCAGGGTCTaGAAGCGGCGCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPSSPRV*KRRTGT
Trigger: TGTGCCTGTGCGCCGCTTCCAGACCCTGGGTGAGCT...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCACACAAGGCCCTGGTTaGGCTGGGCGTACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLTQGPG*AGRTGR
Trigger: TCGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGT...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAGGGCAGAAATGCTGGTaGAGCCAGAGCGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGEGQKCW*SQSAGA
Trigger: TGCCCCCGCGCTCTGGCTCCACCAGCATTTCTGCCC...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAAGGGCAGAAATGCTGGTaGAGCCAGAGCGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKGQKCW*SQSAGA
Trigger: TGCCCCCGCGCTCTGGCTCCACCAGCATTTCTGCCC...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCGGTGCTCAGCCCATTaGGAGCACTCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTRCSAH*EHSQQL
Trigger: CAGCTGCTGAGAGTGCTCCCAATGGGCTGAGCACCG...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCGAGCTGGGGGTGCTGTaGAGCTCATGTCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTELGVL*SSCPVG
Trigger: CCCTACAGGACATGAGCTCCACAGCACCCCCAGCTC...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCAGGCCTGCACGGGGATaGTCTTGGCCTTACGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSRPARG*SWPYVW
Trigger: CCACACGTAAGGCCAAGACCATCCCCGTGCAGGCCT...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAATGCCCAGGCGCTCCGTaGGCACCCGCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKCPGAP*APAPSW
Trigger: CCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCA...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCTGACCTGGGCTCCTaGCTCCCTCGGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPPDLGS*LPRDTE
Trigger: CTCTGTGTCCCGAGGGAGCCAGGAGCCCAGGTCAGG...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCTGCGGCTCCCTGACCTaGGCTCCTGGCTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: INPSPVLGLFLHFRTDTRCGSLT*APGSLG
Trigger: CCCGAGGGAGCCAGGAGCCCAGGTCAGGGAGCCGCA...GCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCGGGCCTCCCCGTTGGTaGCGGTTTCTCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSGPPRW*RFLWFF
Trigger: GAAGAACCAGAGAAACCGCCACCAACGGGGAGGCCC...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGGCCGCCACCCCTTCTaGTTCAGGAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLGRHPF*FRSSLW
Trigger: CCAGAGGGAGCTCCTGAACCAGAAGGGGTGGCGGCC...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTTCACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGGGCCTTGGGAGGTGGTaGGCCACGGGCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VHSFVVPPLSLAELQGVQGLGRW*ATGLSP
Trigger: GGGGCTGAGGCCCGTGGCCCACCACCTCCCAAGGCC...CTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAGTGGAGGCCTTGGATaGGCCTTGGGAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPSGGLG*ALGGGG
Trigger: CCCACCACCTCCCAAGGCCCATCCAAGGCCTCCACT...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCCCCAGGAAAGTGCTaGCTGGTGAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRPPGKC*LVRGLG
Trigger: CCCCAGGCCCCTCACCAGCCAGCACTTTCCTGGGGG...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTCTCCCGGATGCGGGGTaGAGGGAAGCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPLPDAG*REAEGP
Trigger: CGGCCCCTCAGCTTCCCTCCACCCCGCATCCGGGAG...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCAGATGTCAAAGGCATTaGGCTGCCGGTCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGARCQRH*AAGRPA
Trigger: CGCTGGGCGACCGGCAGCTCAATGCCTTTGACATCT...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCCGTGGGCAGCTGGCGTaGAGACCACTGCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPRGQLA*RPLHFE
Trigger: CTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACG...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGGACCCTGTCCCGGGCTaGGACCTGCGAGGAACCTCC +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWDPVPG*DLRGTS
Trigger: GGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTC...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGCAGTGGGGGCAGAAATaGTGGTGGAGCCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLQWGQK*WWSQSA
Trigger: CGCGCTCTGGCTCCACCAGCATTTCTGCCCCCACTG...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298229.7
ENST00000538751.5
CDS-3UTR GCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCGGTCCAGCCCATAGCTaGCTTTCAGGTAGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTGPAHS*LSGSRA
Trigger: CGCACGACTACCTGAAAGGCAGCTATGGGCTGGACC...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCCCAGGGTGTTGGCGATaGCAGTCTTCACACTGGACG +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSPGCWR*QSSHWT
Trigger: CGTCCAGTGTGAAGACTGGCATCGCCAACACCCTGG...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGAGCGTCTTGGCCATCTaGAGCACCGAGCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPSVLAI*STEQDR
Trigger: CCGGTCCTGCTCGGTGCTGCAGATGGCCAAGACGCT...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCGCACGGAGCCTCCTCTaGCAGGTCTTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RLLARPCPGLRPARNLPPARSLL*QVFLDA
Trigger: AGCATCCAGGAAGACCTGGCAGAGGAGGCTCCGTGC...GGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAAGGCCCTGGTTGGGCTaGGCGTACAGGCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKRPWLG*AYRPMS
Trigger: GCTCATCGGCCTGTACGCCCAGCCCAACCAGGGCCT...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCGAGCTGGGGGTGCTGTaGAGCTCATGTCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPELGVL*SSCPVG
Trigger: CCCTACAGGACATGAGCTCCACAGCACCCCCAGCTC...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCTCTTGGCCTTACGTGTaGATGGCTGCGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGASWPYV*MAAELG
Trigger: CCCCAGCTCCGCAGCCATCCACACGTAAGGCCAAGA...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGCCTCTGGCTTCAACCTaGGGGTCAAGGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLPLAST*GSRAPP
Trigger: GGGAGGAGCCCTTGACCCCCAGGTTGAAGCCAGAGG...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGTTCTTGGTGGCAGATaGGACAGGGGCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPVLGGR*DRGPGR
Trigger: CCTGCCAGGGCCCCTGTCCCATCTGCCACCAAGAAC...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCACTTTGTTCTTGGTaGCAGATGGGACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTPLCSW*QMGQGP
Trigger: GGGCCCCTGTCCCATCTGCCACCAAGAACAAAGTGG...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCGTGGTGCCCAAGCTGTaGAGCAGGCACTGTAATGGC +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTVVPKL*SRHCNG
Trigger: GCCATTACAGTGCCTGCTCCACAGCTTGGGCACCAC...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCTGGAGGTGGAAAGTCTaGAGGGGGCAGTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLWRWKV*RGQCAS
Trigger: GGAGGCACACTGCCCCCTCCAGACTTTCCACCTCCA...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGGGCCTTGGGAGGTGGTaGGCCACGGGCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALGLGRW*ATGLSP
Trigger: GGGGCTGAGGCCCGTGGCCCACCACCTCCCAAGGCC...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTGCCTTGGATGGGCCTTaGGAGGTGGTGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCALDGP*EVVGHG
Trigger: CCCGTGGCCCACCACCTCCCAAGGCCCATCCAAGGC...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGGCCTTGGATGGGCCTTaGGAGGTGGTGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLALDGP*EVVGHG
Trigger: CCCGTGGCCCACCACCTCCCAAGGCCCATCCAAGGC...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGAGTGGAGGCCTTGGATaGGCCTTGGGAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLSGGLG*ALGGGG
Trigger: CCCACCACCTCCCAAGGCCCATCCAAGGCCTCCACT...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGGGCAGTGGAGGCCTTaGATGGGCCTTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKGQWRP*MGLGRW
Trigger: CCACCTCCCAAGGCCCATCCAAGGCCTCCACTGCCC...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCACCGGTCATCCCCACTaGCCACTTCCCCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPTGHPH*PLPPGK
Trigger: CTTTCCTGGGGGAAGTGGCCAGTGGGGATGACCGGT...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACTCATCCTCCCCATCTaGGGCATCCCGGTCATCCGG +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVLILPI*GIPVIR
Trigger: CCGGATGACCGGGATGCCTCAGATGGGGAGGATGAG...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTAGGATGCGGTCGTGCGTaGAGGTGGTCCAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVGCGRA*RWSSPP
Trigger: AGGAGGACTGGACCACCTTCACGCACGACCGCATCC...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCGCCTGGGAGGAGCGCTaGGCGTGCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAAWEER*ACRPSR
Trigger: CCTGCTGGGCCTGCACGCTCAGCGCTCCTCCCAGGC...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCCCTATTGGGCAGGAATaGCCAGAACACCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPPIGQE*PEHPRL
Trigger: GAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGG...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCGGCAGGTTCTGCTGCTaGAAAAGGCGGGTCACCATG +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAGRFCC*KRRVTM
Trigger: CATGGTGACCCGCCTTTTGCAGCAGCAGAACCTGCC...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCTGTGGCAGGTTCTGCTaGTGCAAAAGGCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPCGRFC*CKRRVT
Trigger: GGTGACCCGCCTTTTGCAGCAGCAGAACCTGCCACA...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACTGCGGAGCTGGGGGTaGTGTGGAGCTCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRLRSWG*CGAHVL
Trigger: CAGGACATGAGCTCCACAGCACCCCCAGCTCCGCAG...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTATGGCGGATGCGGTCGTaGGTGAAGGTGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVWRMRS*VKVVQS
Trigger: GGACTGGACCACCTTCACGCACGACCGCATCCGCCA...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCCGAAGGAAGACCTTGTaGTTCTCCCGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSRRKTL*FSRSRL
Trigger: CAACCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCG...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACTTCCCCCAGGAAAGTaGTGGCTGGTGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRLPPGK*WLVRGL
Trigger: CAGGCCCCTCACCAGCCAGCACTTTCCTGGGGGAAG...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAACTTCCCCCAGGAAAGTaGTGGCTGGTGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKLPPGK*WLVRGL
Trigger: CAGGCCCCTCACCAGCCAGCACTTTCCTGGGGGAAG...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAGCCGGAGCGTCTTGGCCATCTaGAGCACCGAGCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: PLSLAELQGVQKEALVSRSVLAI*STEQDR
Trigger: CCGGTCCTGCTCGGTGCTGCAGATGGCCAAGACGCT...CCGGCTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATGCGCACACAAGGCCCTaGTTGGGCTGGGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYAHTRP*LGWAYR
Trigger: CCTGTACGCCCAGCCCAACCAGGGCCTTGTGTGCGC...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTATCCCGGTCATCCGGTaGGTCCGGCTCTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: SSSAVVQARWKAAETGESIPVIR*VRLSLT
Trigger: GGTGAGCGAGAGCCGGACCCACCGGATGACCGGGAT...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGGGGCAGAAATGCTGGTaGAGCCAGAGCGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FVVPPLSLAELQGVQKEAGQKCW*SQSAGA
Trigger: TGCCCCCGCGCTCTGGCTCCACCAGCATTTCTGCCC...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTTGGGGGCAGAAATGCTaGTGGAGCCAGAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCWGQKC*WSQSAG
Trigger: CCCCGCGCTCTGGCTCCACCAGCATTTCTGCCCCCA...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298229.7
ENST00000538751.5
CDS-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAGACTGCTGGGCCCAGTaGGGGCAGAAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRDCWAQ*GQKCWW
Trigger: CCACCAGCATTTCTGCCCCCACTGGGCCCAGCAGTC...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298229.7
ENST00000538751.5
CDS-3UTR CCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGTGGGGCAGGTGGCTaGCTCCACCCCTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNGGAGG*LHPSQL
Trigger: AAGCTGTGAGGGGTGGAGCCAGCCACCTGCCCCACC...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTAGGGTACGGGTGAGGTaGGGCAGGTGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVPPLSLAELQGVQKEALRVRVR*GRWLAP
Trigger: TGGAGCCAGCCACCTGCCCCACCTCACCCGTACCCT...AAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp GTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGGCCTTACGTGTGGATaGCTGCGGAGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: VVPPLSLAELQGVQKEALGLTCG*LRSWGC
Trigger: GCACCCCCAGCTCCGCAGCCATCCACACGTAAGGCC...AAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGTCTTGGCCTTACGTGTaGATGGCTGCGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPSWPYV*MAAELG
Trigger: CCCCAGCTCCGCAGCCATCCACACGTAAGGCCAAGA...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCATGAGCTGCAACAGCTaGCAGAAGGCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLMSCNS*QKASRF
Trigger: GAAGCGGGAGGCCTTCTGCCAGCTGTTGCAGCTCAT...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCGCTCATAGCGGTAGGTaGGTGGGAAGGAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTAHSGR*VGRRSP
Trigger: AGGAGATCTCCTTCCCACCCACCTACCGCTATGAGC...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCAAGGTCAGGAACTGTTaGGCCGTGCTGCCGATCATG +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTKVRNC*AVLPIM
Trigger: CATGATCGGCAGCACGGCCCAACAGTTCCTGACCTT...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTCTGGCTTCAACCTaGGGGTCAAGGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRPLAST*GSRAPP
Trigger: GGGAGGAGCCCTTGACCCCCAGGTTGAAGCCAGAGG...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCATGGAGGTGGAAAGTCTaGAGGGGGCAGTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPWRWKV*RGQCAS
Trigger: GGAGGCACACTGCCCCCTCCAGACTTTCCACCTCCA...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCGTAAAGGATCCAGGCTaGGGGGCAGGAAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLVKDPG*GAGRWL
Trigger: CAGCCATCTTCCTGCCCCCCAGCCTGGATCCTTTAC...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAAGTGGAGGCCTTGGATaGGCCTTGGGAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKSGGLG*ALGGGG
Trigger: CCCACCACCTCCCAAGGCCCATCCAAGGCCTCCACT...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGGGGCAGTGGAGGCCTTaGATGGGCCTTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ASWCLRYHLLSCRVSRRRGQWRP*MGLGRW
Trigger: CCACCTCCCAAGGCCCATCCAAGGCCTCCACTGCCC...CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGCCCCCAGGAAAGTGCTaGCTGGTGAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HSFVVPPLSLAELQGVQKPPGKC*LVRGLG
Trigger: CCCCAGGCCCCTCACCAGCCAGCACTTTCCTGGGGG...CTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGTCTGCCAGGTCTTCCTaGATGCTCTCCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLSARSS*MLSRMR
Trigger: CCGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGA...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAGCGCTCCAAGCCGATaGCCCGCAGCCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPSAPSR*PAARHS
Trigger: TGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCT...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: INPSPVLGLFLHFRTDTRPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...GCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCCATCCACGCTCAGCGTaGACTTCTGTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTHPRSA*TSVTSQ
Trigger: TTGGGAAGTCACAGAAGTTCACGCTGAGCGTGGATG...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCATGAAGTCCTTGCGCTaGGTCCGGTCCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLMKSLR*VRSFSF
Trigger: GAAGGAGAAGGACCGGACTCAGCGCAAGGACTTCAT...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGGGCAGGAGGCCTCTGTaGAGGCTGGCTTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALGRRPL*RLACGS
Trigger: GGAGCCGCAAGCCAGCCTTCACAGAGGCCTCCTGCC...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTGGCCGCAGAAACTGGTaGAAGTGGGGGCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCGRRNW*KWGPRR
Trigger: ACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCC...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGCCATTATGCACCAGGCCCTCGACCCTGTCCCGGGCTaGGACCTGCGAGGAACCTCC +
Preference number: 4 (lower is better)
Translates to: GDVTEKLQVVPAIMHQALDPVPG*DLRGTS
Trigger: GGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTC...GAGGGCCTGGTGCATAATGGCTGGGACGACCTGGAGTTTCTCAGTGACATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp GCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCACAGGCACACCCTaGGAGGTCTGCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASWCLRYHLLSCRVSRRRRTGTP*EVCTAK
Trigger: CTTGGCTGTGCAGACCTCGCAGGGTGTGCCTGTGCG...CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCTTGTCCACCTCACTGTaGAGCCTCCGGCATGAGGTA +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLLSTSL*SLRHEV
Trigger: TACCTCATGCCGGAGGCTGCACAGTGAGGTGGACAA...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGAGGCTCTCTAGTTCCTaGTCCCCTGTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLRLSSS*SPVCGR
Trigger: CCTGCCACAGACAGGGGAGCAGGAACTAGAGAGCCT...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGTTCACCTCAAAGGCCTaGACGGGGATGGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLFTSKA*TGMVLA
Trigger: GGCCAAGACCATCCCCGTGCAGGCCTTTGAGGTGAA...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCACCAGGGTGTTGGCGATaGCAGTCTTCACACTGGACG +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPPGCWR*QSSHWT
Trigger: CGTCCAGTGTGAAGACTGGCATCGCCAACACCCTGG...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTAGAGCCGCTCACGGGTaGCCAGGCGCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTRAAHG*PGAPWA
Trigger: TGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCT...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAGCTCTCCCACACGAGGGTaGCGGTGGTGCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PPLSLAELQGVQKEALVSSPTRG*RWCPSC
Trigger: ACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGA...GCTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCCAGGTCTTCCTGGATaGTCTCCCGGATGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: FVVPPLSLAELQGVQKEAPGLPG*SPGCGV
Trigger: CACCCCGCATCCGGGAGAGCATCCAGGAAGACCTGG...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCGCAGCCAGGCACTCATaGCTGCCTCGCCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAAARHS*LPRPAR
Trigger: GCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGC...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACTCCCTCCCCCACCCTaGCGCCGTGCATCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARLPPPP*RRASPE
Trigger: CTCTGGGGATGCACGGCGGCAGGGTGGGGGAGGGAG...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCACGCAACCCTTACGACTaGCCAGGAGGCTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPRNPYD*PGGCLQ
Trigger: TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCG...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGAGCACCCCTTCCTCCTaGCAGCAAGCTCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: FVVPPLSLAELQGVQKEASTPSS*QQAQHP
Trigger: GGGGTGCTGAGCTTGCTGGCAGGAGGAAGGGGTGCT...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCTCCTCCAAGTCCTCCTCGGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGAGGCCCTGGTTGGGCTaGGCGTACAGGCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: ASSKSSSVMSLRNSRSSQRPWLG*AYRPMS
Trigger: GCTCATCGGCCTGTACGCCCAGCCCAACCAGGGCCT...CTGGGACGACCTGGAGTTTCTCAGTGACATCACCGAGGAGGACTTGGAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGACACAAGGCCCTGGTTaGGCTGGGCGTACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWTQGPG*AGRTGR
Trigger: TCGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGT...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGCACTCTCAGCAGCTaGAGCTGTGGGAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGESTLSS*SCGSLR
Trigger: CCTGAGACTCCCACAGCTCCAGCTGCTGAGAGTGCT...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGGTGGGGCAGGTGGCTaGCTCCACCCCTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPGGAGG*LHPSQL
Trigger: AAGCTGTGAGGGGTGGAGCCAGCCACCTGCCCCACC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGAAAGGCGGGTCACCATaGGCGAGCTCTGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPKGGSP*ASSAGQ
Trigger: TTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTT...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATGGATGGCTGCGGAGCTaGGGGTGCTGTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYGWLRS*GCCGAH
Trigger: ATGAGCTCCACAGCACCCCCAGCTCCGCAGCCATCC...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGTGGTCCAGTCCTCCTaGGAGTCCCGCTGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPVVQSS*ESRCLR
Trigger: GCGGAGACAGCGGGACTCCCAGGAGGACTGGACCAC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAATGGGACTTAATGAGCTaGCGGATGCGGTCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGEWDLMS*RMRSCV
Trigger: CACGCACGACCGCATCCGCCAGCTCATTAAGTCCCA...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCATGGGACTTAATGAGCTaGCGGATGCGGTCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPWDLMS*RMRSCV
Trigger: CACGCACGACCGCATCCGCCAGCTCATTAAGTCCCA...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCTTGTTCTGGACACGCTaGGACTTAATGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTLFWTR*DLMSWR
Trigger: CCGCCAGCTCATTAAGTCCCAGCGTGTCCAGAACAA...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCATAGCGGTAGGTGGGTaGGAAGGAGATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPIAVGG*EGDLLL
Trigger: GAGGAGGAGATCTCCTTCCCACCCACCTACCGCTAT...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAACCATGAGGGCACATTaGTCCGGACCCCAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGETMRAH*SGPQLA
Trigger: AGCCAACTGGGGTCCGGACCAATGTGCCCTCATGGT...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGGAGAACTTGGTGCGGCTaGCTGTCTTCACAATGGCCT +
Preference number: 4 (lower is better)
Translates to: YDCPGGCLQDPVPGVGSWRTWCG*LSSQWP
Trigger: AGGCCATTGTGAAGACAGCCAGCCGCACCAAGTTCT...CCAGCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR CCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCGTGAGCAGGAGGTGCTaGTCCTGCAGGTACTCGATA +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAVSRRC*SCRYSI
Trigger: TATCGAGTACCTGCAGGACCAGCACCTCCTGCTCAC...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCGTGAGCAGGAGGTGCTaGTCCTGCAGGTACTCGATA +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLVSRRC*SCRYSI
Trigger: TATCGAGTACCTGCAGGACCAGCACCTCCTGCTCAC...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGTGCCCAGGCGCTCCGTaGGCACCCGCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALCPGAP*APAPSW
Trigger: CCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCA...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCGTTCTTCAAATAACCTaGAGAGCGGGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTVLQIT*RAGRRP
Trigger: AGGCCTCCTGCCCGCTCTCCAGGTTATTTGAAGAAC...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTGTTCTTGGTGGCAGATaGGACAGGGGCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCVLGGR*DRGPGR
Trigger: CCTGCCAGGGCCCCTGTCCCATCTGCCACCAAGAAC...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAGCGTTCTTGGTGGCAGATaGGACAGGGGCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLSLAELQGVQKEALVSVLGGR*DRGPGR
Trigger: CCTGCCAGGGCCCCTGTCCCATCTGCCACCAAGAAC...GCTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCTCGCTCAGCGTCTTaGCCATCTGCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCPRSAS*PSAAPS
Trigger: GCTCGGTGCTGCAGATGGCCAAGACGCTGAGCGAGG...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTCCTCGCTCAGCGTCTTaGCCATCTGCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPPRSAS*PSAAPS
Trigger: GCTCGGTGCTGCAGATGGCCAAGACGCTGAGCGAGG...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCACAGGGTTAATGATGTaGCCGGTCCACTTCCACCCT +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTTGLMM*PVHFHP
Trigger: AGGGTGGAAGTGGACCGGCCACATCATTAACCCTGT...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGTCACCCCCAGGCTaGGGTCTAAGACCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKLSPPG*GLRPKA
Trigger: TGCTTTGGGTCTTAGACCCCAGCCTGGGGGTGACAG...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGACTGCTGGGCCCAGTaGGCAGAAATGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKDCWAQ*AEMLVE
Trigger: CTCCACCAGCATTTCTGCCCACTGGGCCCAGCAGTC...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR TCA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAAATGAAGTCCTTGCGCTaGGTCCGGTCCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKMKSLR*VRSFSF
Trigger: GAAGGAGAAGGACCGGACTCAGCGCAAGGACTTCAT...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCTGCCGATCATGGATTTaGGTGCAACCACACACTCCC +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPCRSWI*VQPHTP
Trigger: GGGAGTGTGTGGTTGCACTCAAATCCATGATCGGCA...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTAGCCTGGGAGGAGCGCTaGGCGTGCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLAWEER*ACRPSR
Trigger: CCTGCTGGGCCTGCACGCTCAGCGCTCCTCCCAGGC...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGGGGTGGAGGGAAGCTaGGGGGCCGGCCATAGTCCG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWGVEGS*GAGHSP
Trigger: CGGACTATGGCCGGCCCCTCAGCTTCCCTCCACCCC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCGGGGTGGAGGGAAGCTaGGGGGCCGGCCATAGTCCG +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPGVEGS*GAGHSP
Trigger: CGGACTATGGCCGGCCCCTCAGCTTCCCTCCACCCC...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAGCCGGCCTATTGGGCAGGAATaGCCAGAACACCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PLSLAELQGVQKEALVSRPIGQE*PEHPRL
Trigger: GAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGG...CCGGCTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTACTCGGACCAGGAAGCTaGCATCGCGGCCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLLGPGS*HRGPPG
Trigger: CCCGGGCGGGCCGCGATGGCAGCTTCCTGGTCCGAG...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298229.7
CDS-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAGTCTGTGGCAGGTTCTaGTGCTGCAAAAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRVCGRF*CCKRRV
Trigger: GACCCGCCTTTTGCAGCAGCAGAACCTGCCACAGAC...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAGCCGGTTCACCTCAAAGGCCTaGACGGGGATGGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PLSLAELQGVQKEALVSRFTSKA*TGMVLA
Trigger: GGCCAAGACCATCCCCGTGCAGGCCTTTGAGGTGAA...CCGGCTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCTCGTCCTGCTTGGAGTaGTTGTTCTTCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTSSCLE*LFFMSC
Trigger: GCAGCTCATGAAGAACAAGCACTCCAAGCAGGACGA...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCTGGCTTGACCAGCACTaGCACCTTGATATTCCACAG +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTWLDQH*HLDIPQ
Trigger: CTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCA...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTTCAAAGGCATTGAGCTaGCGGTCGCCCAGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCSKALS*RSPSES
Trigger: GCTCTCGCTGGGCGACCGGCAGCTCAATGCCTTTGA...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGTCAAAGGCATTGAGCTaGCGGTCGCCCAGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: FVVPPLSLAELQGVQKEASKALS*RSPSES
Trigger: GCTCTCGCTGGGCGACCGGCAGCTCAATGCCTTTGA...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGTTGGCTTCTGCTTGTaGCAGGCATATGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPVGFCL*QAYVSR
Trigger: CCGGGACACATATGCCTGGCACAAGCAGAAGCCAAC...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCACCCCAGTTGGCTTCTaGTTGTGCCAGGCATATGTG +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGATPVGF*LCQAYV
Trigger: CACATATGCCTGGCACAAGCAGAAGCCAACTGGGGT...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAACTGTGAGCAGGAGGTaGTGGTCCTGCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRTVSRR*WSCRYS
Trigger: CGAGTACCTGCAGGACCAGCACCTCCTGCTCACAGT...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAACTGTGAGCAGGAGGTaGTGGTCCTGCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKTVSRR*WSCRYS
Trigger: CGAGTACCTGCAGGACCAGCACCTCCTGCTCACAGT...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCGGGGGCTTTGCTCTTTaGTCCTGCCTCATCCTTATC +
Preference number: 4 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAGGFAL*SCLILI
Trigger: GATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCC...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGGCACGGAGCCTCCTCTaGCAGGTCTTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWARSLL*QVFLDA
Trigger: AGCATCCAGGAAGACCTGGCAGAGGAGGCTCCGTGC...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCAGCCAGGCACTCATaGCTGCCTCGCCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWAARHS*LPRPAR
Trigger: GCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCTATCACTTGCTGAGCTaGAGGGTGTCCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPYHLLS*RVSRRR
Trigger: CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATA...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGCCCACCCTGCCGCCGTaGATCCCCAGAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWPTLPP*IPRAGQ
Trigger: CTGCCCTGCTCTGGGGATGCACGGCGGCAGGGTGGG...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTCCCGGGCTGAGACCTaGGAGGAACCTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWASRAET*EEPPSP
Trigger: GGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGGCCCAGGAGGCTGCTTaGAAGACCCTGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALAQEAA*KTLSRA
Trigger: AGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGC...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAACCACCTGCCCAGGCTaGACAGGGTTAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPTTCPG*TGLMMW
Trigger: CCACATCATTAACCCTGTGCAGCCTGGGCAGGTGGT...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGCGGCTCAGGTCGCGGTaGTACCAGGAGGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWRLRSR*YQEGAW
Trigger: CCAGGCCCCCTCCTGGTACCACCGCGACCTGAGCCG...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298229.7
CDS-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGACACAAGGCCCTGGTTaGGCTGGGCGTACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPTQGPG*AGRTGR
Trigger: TCGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGT...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTGGGAGTCTCAGGAGCTaGCAGGGGACTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTGSLRS*QGTAGP
Trigger: GGGCCCAGCAGTCCCCTGCCAGCTCCTGAGACTCCC...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTCGGTGCTCAGCCCATTaGGAGCACTCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSSAVVQARWKAAETGESRCSAH*EHSQQL
Trigger: CAGCTGCTGAGAGTGCTCCCAATGGGCTGAGCACCG...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCGGTGCTCAGCCCATTaGGAGCACTCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCRCSAH*EHSQQL
Trigger: CAGCTGCTGAGAGTGCTCCCAATGGGCTGAGCACCG...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAATGGGCGAGCTCTGCTaGTCAAACACCTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPMGELC*SNTLDR
Trigger: CCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCAT...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGTCTTGGCCTTACGTGTaGATGGCTGCGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FVVPPLSLAELQGVQKEASWPYV*MAAELG
Trigger: CCCCAGCTCCGCAGCCATCCACACGTAAGGCCAAGA...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTAACCATGAGGGCACATTaGTCCGGACCCCAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVTMRAH*SGPQLA
Trigger: AGCCAACTGGGGTCCGGACCAATGTGCCCTCATGGT...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACCAAACACGGGGGAATaGTCGCTGGTGACGATGTCA +
Preference number: 4 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKPNTGE*SLVTMS
Trigger: TGACATCGTCACCAGCGACCATTCCCCCGTGTTTGG...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAGAACTTGGTGCGGCTaGCTGTCTTCACAATGGCCT +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPRTWCG*LSSQWP
Trigger: AGGCCATTGTGAAGACAGCCAGCCGCACCAAGTTCT...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAGTGAGCAGGAGGTGCTaGTCCTGCAGGTACTCGATA +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPVSRRC*SCRYSI
Trigger: TATCGAGTACCTGCAGGACCAGCACCTCCTGCTCAC...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCAAGGTCAGGAACTGTTaGGCCGTGCTGCCGATCATG +
Preference number: 4 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPKVRNC*AVLPIM
Trigger: CATGATCGGCAGCACGGCCCAACAGTTCCTGACCTT...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTCTCCTCGCCACGGTaGGATAGGAAGGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKVSSPR*DRKVRN
Trigger: GTTCCTGACCTTCCTATCCCACCGTGGCGAGGAGAC...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAGTCTCCTCGCCACGGTaGGATAGGAAGGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRVSSPR*DRKVRN
Trigger: GTTCCTGACCTTCCTATCCCACCGTGGCGAGGAGAC...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTTGGGGGCCTCCCCGTTaGTGGCGGTTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPWGPPR*WRFLWF
Trigger: GAACCAGAGAAACCGCCACCAACGGGGAGGCCCCCA...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTCCTCTGGCTTCAACCTaGGGGTCAAGGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPPLAST*GSRAPP
Trigger: GGGAGGAGCCCTTGACCCCCAGGTTGAAGCCAGAGG...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAATTCAGGAGCTCCCTCTaGCTTCAACCTGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKFRSSL*LQPGGQ
Trigger: TTGACCCCCAGGTTGAAGCCAGAGGGAGCTCCTGAA...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTCCGGGGGCAGCAGCTaGTGCGGGACCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWASGGSS*CGTPSR
Trigger: CCTTGAAGGGGTCCCGCACCAGCTGCTGCCCCCGGA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAGTGGTGCCCAAGCTGTaGAGCAGGCACTGTAATGGC +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRVVPKL*SRHCNG
Trigger: GCCATTACAGTGCCTGCTCCACAGCTTGGGCACCAC...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTGCCTTGGATGGGCCTTaGGAGGTGGTGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTALDGP*EVVGHG
Trigger: CCCGTGGCCCACCACCTCCCAAGGCCCATCCAAGGC...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGCCATTATGCACCAGGCCCTCCCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GDVTEKLQVVPAIMHQALPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...GAGGGCCTGGTGCATAATGGCTGGGACGACCTGGAGTTTCTCAGTGACATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGCCATTATGCACCAGGCCCTCGGAGCTCCTCCGCTGTaGTTCAGGCCCGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GDVTEKLQVVPAIMHQALGAPPL*FRPGGR
Trigger: CCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC...GAGGGCCTGGTGCATAATGGCTGGGACGACCTGGAGTTTCTCAGTGACATCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTGGGCGTACAGGCCGATaGGCTCACCCAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTGRTGR*AHPGSG
Trigger: TCCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCC...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCGTGCAGCCTCCGGCATaGGGTAGCGAGGGTACGGGT +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAVQPPA*GSEGTG
Trigger: ACCCGTACCCTCGCTACCTCATGCCGGAGGCTGCAC...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAACATCCACGCTCAGCGTaGACTTCTGTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGEHPRSA*TSVTSQ
Trigger: TTGGGAAGTCACAGAAGTTCACGCTGAGCGTGGATG...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAATGAAGTCCTTGCGCTaGGTCCGGTCCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRMKSLR*VRSFSF
Trigger: GAAGGAGAAGGACCGGACTCAGCGCAAGGACTTCAT...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCCTTGATATTCCACAGTaGTTGCATGGCAATCGGGCG +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPLDIPQ*LHGNRA
Trigger: CGCCCGATTGCCATGCAATCACTGTGGAATATCAAG...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCTCTCATTTCCCGAGGTaGGGTGACAATTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: PARSSGYSFISGRTPAPTSHFPR*GDNSQS
Trigger: GCTTTGTGAATTGTCACCTCACCTCGGGAAATGAGA...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGAATCCGGTCACACCATaGGGGCACATTGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWNPVTP*GHIGPD
Trigger: GTCCGGACCAATGTGCCCTCATGGTGTGACCGGATT...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCGGCAGGAGGCCTCTGTaGAGGCTGGCTTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPGRRPL*RLACGS
Trigger: GGAGCCGCAAGCCAGCCTTCACAGAGGCCTCCTGCC...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCAGAAGGAGGCGCTTGTaGGCCGGGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWARRRRL*AGSCTP
Trigger: TGGGGTGCAGGACCCGGCTCACAAGCGCCTCCTTCT...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp TCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTCCGCTATCACTTGCTaGGCTGCAGGGTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SWCLRYHLLSCRVSRRRRSAITC*AAGCPE
Trigger: TTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGA...GCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGACCCTGTCCCGGGCTaGGACCTGCGAGGAACCTCC +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWDPVPG*DLRGTS
Trigger: GGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCGCACAGGCACACCCTaGGAGGTCTGCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALRTGTP*EVCTAK
Trigger: CTTGGCTGTGCAGACCTCGCAGGGTGTGCCTGTGCG...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTGGTCCAGCCCATAGCTaGCTTTCAGGTAGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCGPAHS*LSGSRA
Trigger: CGCACGACTACCTGAAAGGCAGCTATGGGCTGGACC...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTGGCAGGTTCTGCTGCTaGAAAAGGCGGGTCACCATG +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPGRFCC*KRRVTM
Trigger: CATGGTGACCCGCCTTTTGCAGCAGCAGAACCTGCC...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATTGTGGCAGGTTCTGCTaGTGCAAAAGGCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNCGRFC*CKRRVT
Trigger: GGTGACCCGCCTTTTGCAGCAGCAGAACCTGCCACA...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGAGGCTCTCTAGTTCCTaGTCCCCTGTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLRLSSS*SPVCGR
Trigger: CCTGCCACAGACAGGGGAGCAGGAACTAGAGAGCCT...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAACTGATACGGTTCTCGTaGTCTGGCTTGACCAGCACT +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGELIRFS*SGLTST
Trigger: AGTGCTGGTCAAGCCAGAGCACGAGAACCGTATCAG...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATCCAGGGTGTTGGCGATaGCAGTCTTCACACTGGACG +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNPGCWR*QSSHWT
Trigger: CGTCCAGTGTGAAGACTGGCATCGCCAACACCCTGG...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCGGGGGCTTTGCTCTTTaGTCCTGCCTCATCCTTATC +
Preference number: 4 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPGGFAL*SCLILI
Trigger: GATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCC...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCCGAGGGTGCCGGTGGTaGCCAAGCTGTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPRGCRW*PSCGAG
Trigger: GCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCG...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATCCAGGCACTCATGCCTaGCTCGCCCAGCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNPGTHA*LAQPAG
Trigger: GCCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGG...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCTCCCGGGCTGAGACCTaGGAGGAACCTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPSRAET*EEPPSP
Trigger: GGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGA...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCGCCCAGGAGGCTGCTTaGAAGACCCTGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAAQEAA*KTLSRA
Trigger: AGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGC...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAATTCCCTAAAACCACCTaGCCAGGCTGCACAGGGTTA +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGEFPKTT*PGCTGL
Trigger: TAACCCTGTGCAGCCTGGGCAGGTGGTTTTAGGGAA...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTAGGCCCTGGTTGGGCTaGGCGTACAGGCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTRPWLG*AYRPMS
Trigger: GCTCATCGGCCTGTACGCCCAGCCCAACCAGGGCCT...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAATCCCGGTCATCCGGTaGGTCCGGCTCTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARIPVIR*VRLSLT
Trigger: GGTGAGCGAGAGCCGGACCCACCGGATGACCGGGAT...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTAAAGGCGGGTCACCATaGGCGAGCTCTGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SSSAVVQARWKAAETGESKGGSP*ASSAGQ
Trigger: TTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTT...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCCTGCACGGGGATaGTCTTGGCCTTACGTGTGG +
Preference number: 4 (lower is better)
Translates to: TASWCLRYHLLSCRVSRRRPARG*SWPYVW
Trigger: CCACACGTAAGGCCAAGACCATCCCCGTGCAGGCCT...CCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp CCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAGCCGGTGTTCCCCAGGGTGTTaGCGATGCCAGTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PLSLAELQGVQKEALVSRCSPGC*RCQSSH
Trigger: GTGTGAAGACTGGCATCGCCAACACCCTGGGGAACA...CCGGCTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAATAGCGGTAGGTGGGTaGGAAGGAGATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKIAVGG*EGDLLL
Trigger: GAGGAGGAGATCTCCTTCCCACCCACCTACCGCTAT...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGGGCCTCCCCGTTGGTaGCGGTTTCTCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPGPPRW*RFLWFF
Trigger: GAAGAACCAGAGAAACCGCCACCAACGGGGAGGCCC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGTCCGGGGGCAGCAGCTaGTGCGGGACCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWSGGSS*CGTPSR
Trigger: CCTTGAAGGGGTCCCGCACCAGCTGCTGCCCCCGGA...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGCCATTATGCACCAGGCCCTCACACGAGGGTGCCGGTaGTGCCCAAGCTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GDVTEKLQVVPAIMHQALTRGCR*CPSCGA
Trigger: TGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGT...GAGGGCCTGGTGCATAATGGCTGGGACGACCTGGAGTTTCTCAGTGACATCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp ACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGTGGAGGTGGAAAGTCTaGAGGGGGCAGTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TASWCLRYHLLSCRVSRRWRWKV*RGQCAS
Trigger: GGAGGCACACTGCCCCCTCCAGACTTTCCACCTCCA...CCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGTAAAGGATCCAGGCTaGGGGGCAGGAAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSAVVQARWKAAETGESVKDPG*GAGRWL
Trigger: CAGCCATCTTCCTGCCCCCCAGCCTGGATCCTTTAC...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGGCCTTGGATGGGCCTTaGGAGGTGGTGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMALDGP*EVVGHG
Trigger: CCCGTGGCCCACCACCTCCCAAGGCCCATCCAAGGC...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGCCCCCAGGAAAGTGCTaGCTGGTGAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWPPGKC*LVRGLG
Trigger: CCCCAGGCCCCTCACCAGCCAGCACTTTCCTGGGGG...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTACTCCCGGATGCGGGGTaGAGGGAAGCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLLPDAG*REAEGP
Trigger: CGGCCCCTCAGCTTCCCTCCACCCCGCATCCGGGAG...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAACACCCCCAGCGGGGGTaGGGAGGTCTTAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQHPQRG*GGLSGA
Trigger: AGCTCCGCTAAGACCTCCCCACCCCCGCTGGGGGTG...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTGGTGTTGCCTATTaGGCAGGAATGACCAGAACA +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLPGVAY*AGMTRT
Trigger: TGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGG...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAACCAGACCCTTCGATGTaGACCAGGATGTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: RSSSAVVQARWKAAETGEPDPSM*TRMSRF
Trigger: AAAACGTGACATCCTGGTTCACATCGAAGGGTCTGG...TTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCTTGATATTCCACAGTaGTTGCATGGCAATCGGGCG +
Preference number: 4 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPLDIPQ*LHGNRA
Trigger: CGCCCGATTGCCATGCAATCACTGTGGAATATCAAG...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCAGATCTCCTCCTCACTaGATCGAAGGAAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: PRRLLARPCPGLRPARNLRSPPH*IEGRPC
Trigger: ACAAGGTCTTCCTTCGATTCAGTGAGGAGGAGATCT...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGGGGAATGGTCGCTGGTaGCGATGTCATCAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLGNGRW*RCHQCN
Trigger: GTTGCACTGATGACATCGTCACCAGCGACCATTCCC...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR TCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAATGCCGATCATGGATTTaGGTGCAACCACACACTCCC +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKCRSWI*VQPHTP
Trigger: GGGAGTGTGTGGTTGCACTCAAATCCATGATCGGCA...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTCCTTCATGGAGCCTCTaGTATTGCCTGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SSSAVVQARWKAAETGESPSWSL*YCLSPR
Trigger: GCGAGGAGACAGGCAATATCAGAGGCTCCATGAAGG...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACGGGCAGGAAGATGGCTaGGTCCGGCAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHGQEDG*VRQWWR
Trigger: CCTCCACCACTGCCGGACTCAGCCATCTTCCTGCCC...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAGAAGGAGGCGCTTGTaGGCCGGGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPRRRRL*AGSCTP
Trigger: TGGGGTGCAGGACCCGGCTCACAAGCGCCTCCTTCT...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGCTGGCACTTTATGGCTaGGATCCTGCCCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: TASWCLRYHLLSCRVSRRLALYG*DPAPPQ
Trigger: TTGGGGTGGGGCAGGATCTCAGCCATAAAGTGCCAG...CCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAGCCCCTCCCCCACCTaGGAAACTCCAGGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPSPSPT*ETPGRP
Trigger: GGGACGACCTGGAGTTTCTCAGGTGGGGGAGGGGCT...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320683.7
CDS-3UTR TCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAAACAGGCTGGGAAGTaGGATGGGCAAGGGGATCCT +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPKQAGK*DGQGDP
Trigger: AGGATCCCCTTGCCCATCTCACTTCCCAGCCTGTTT...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320683.7
CDS-3UTR GCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGTGTGGCAGGTTCTGCTaGTGCAAAAGGCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPCGRFC*CKRRVT
Trigger: GGTGACCCGCCTTTTGCAGCAGCAGAACCTGCCACA...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTAATGTCGGGCTCGTCCTaGTTGGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVMSGSS*LECLFF
Trigger: GAAGAACAAGCACTCCAAGCAGGACGAGCCCGACAT...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATAGGAGGTGCTGGTCCTaGAGGTACTCGATATCAGCC +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNRRCWS*RYSISA
Trigger: GGCTGATATCGAGTACCTGCAGGACCAGCACCTCCT...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCGATCATGGATTTGAGTaGAACCACACACTCCCCATA +
Preference number: 4 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTDHGFE*NHTLPI
Trigger: TATGGGGAGTGTGTGGTTGCACTCAAATCCATGATC...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGATCTCCCACACGAGGGTaGCGGTGGTGCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARSPTRG*RWCPSC
Trigger: ACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGA...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTCTCCCACACGAGGGTaGCGGTGGTGCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTSPTRG*RWCPSC
Trigger: ACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCCTTCCCCCAGGAAAGTaGTGGCTGGTGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWALPPGK*WLVRGL
Trigger: CAGGCCCCTCACCAGCCAGCACTTTCCTGGGGGAAG...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCCCAGGTCTTCCTGGATaGTCTCCCGGATGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAPGLPG*SPGCGV
Trigger: CACCCCGCATCCGGGAGAGCATCCAGGAAGACCTGG...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGGCACGGAGCCTCCTCTaGCAGGTCTTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALARSLL*QVFLDA
Trigger: AGCATCCAGGAAGACCTGGCAGAGGAGGCTCCGTGC...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTCCAGGCACTCATGCCTaGCTCGCCCAGCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSPGTHA*LAQPAG
Trigger: GCCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGG...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCCCAATAATATTAAGGTaGTCTCCCTCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: QARWKAAETGESGGPDVPPIILR*SPSPDP
Trigger: TGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGG...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGCCACCCTCCTGGTGTTaGCTATTGGGCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLPPSWC*LLGRND
Trigger: GTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGG...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTCCCAGTGGGCAGAAATaGTGGTGGAGCCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTPSGQK*WWSQSA
Trigger: CGCGCTCTGGCTCCACCAGCATTTCTGCCCACTGGG...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTGACTGCTGGGCCCAGTaGGGGCAGAAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTDCWAQ*GQKCWW
Trigger: CCACCAGCATTTCTGCCCCCACTGGGCCCAGCAGTC...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298229.7
ENST00000538751.5
CDS-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGAAAGGCGGGTCACCATaGGCGAGCTCTGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPKGGSP*ASSAGQ
Trigger: TTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTT...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGGCCTTACGTGTGGATaGCTGCGGAGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQGLTCG*LRSWGC
Trigger: GCACCCCCAGCTCCGCAGCCATCCACACGTAAGGCC...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACTGGACGTACTGACATaGCTGATACGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVLDVLT*LIRFSC
Trigger: GCACGAGAACCGTATCAGCCATGTCAGTACGTCCAG...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTCCAAACACGGGGGAATaGTCGCTGGTGACGATGTCA +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPPNTGE*SLVTMS
Trigger: TGACATCGTCACCAGCGACCATTCCCCCGTGTTTGG...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCGTGGGCAGATGTTGTCACTGCTCTaGGCATCATTCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PLRLPRRLLARPCPGRGQMLSLL*ASFSKL
Trigger: GAGCTTTGAGAATGATGCCCAGAGCAGTGACAACAT...CTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR CCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAACCTGACCTGGGCTCCTaGCTCCCTCGGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQPDLGS*LPRDTE
Trigger: CTCTGTGTCCCGAGGGAGCCAGGAGCCCAGGTCAGG...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTTCACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGCCACTTTGTTCTTGGTaGCAGATGGGACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VHSFVVPPLSLAELQGVQPLCSW*QMGQGP
Trigger: GGGCCCCTGTCCCATCTGCCACCAAGAACAAAGTGG...CTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATTGGCCACTTTGTTCTTaGTGGCAGATGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNWPLCS*WQMGQG
Trigger: CCCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCA...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCACACGAGGGTGCCGGTaGTGCCCAAGCTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWATRGCR*CPSCGA
Trigger: TGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGT...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGTGGAGGTGGAAAGTCTaGAGGGGGCAGTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALWRWKV*RGQCAS
Trigger: GGAGGCACACTGCCCCCTCCAGACTTTCCACCTCCA...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGTAAAGGATCCAGGCTaGGGGGCAGGAAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPVKDPG*GAGRWL
Trigger: CAGCCATCTTCCTGCCCCCCAGCCTGGATCCTTTAC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGTAAAGGATCCAGGCTaGGGGGCAGGAAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: HSFVVPPLSLAELQGVQKVKDPG*GAGRWL
Trigger: CAGCCATCTTCCTGCCCCCCAGCCTGGATCCTTTAC...CTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp TCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTG +
Preference number: 4 (lower is better)
Translates to: SWCLRYHLLSCRVSRRRREFTAS*CLRYHL
Trigger: CAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTC...GCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGGCATTGCAAATGATTaGGCAGCGGGGAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLGIAND*AAGNAD
Trigger: ATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCC...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGCTCGCGGTCGCCCACTaGGTTCTCCTGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMLAVAH*VLLGPK
Trigger: TTTGGGACCCAGGAGAACTCAGTGGGCGACCGCGAG...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGGGAATGGTCGCTGGTaGCGATGTCATCAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPGNGRW*RCHQCN
Trigger: GTTGCACTGATGACATCGTCACCAGCGACCATTCCC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGGGGCAGGAAGATGGCTaGGTCCGGCAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLGQEDG*VRQWWR
Trigger: CCTCCACCACTGCCGGACTCAGCCATCTTCCTGCCC...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGTCCGCTATCACTTGCTaGGCTGCAGGGTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HSFVVPPLSLAELQGVQKSAITC*AAGCPE
Trigger: TTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGA...CTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTTTAGGGCATTGCAAATaGTTGGGCAGCGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPLGHCK*LGSGEC
Trigger: GCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAA...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCGGCCGCAGAAACTGGTaGAAGTGGGGGCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPGRRNW*KWGPRR
Trigger: ACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCC...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCGCACAGGCACACCCTaGGAGGTCTGCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHRTGTP*EVCTAK
Trigger: CTTGGCTGTGCAGACCTCGCAGGGTGTGCCTGTGCG...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGCAGTGGGGGCAGAAATaGTGGTGGAGCCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMQWGQK*WWSQSA
Trigger: CGCGCTCTGGCTCCACCAGCATTTCTGCCCCCACTG...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298229.7
ENST00000538751.5
CDS-3UTR GCA 90 bp GCCTCCTCCAAGTCCTCCTCGGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGACCATGGGCGAGCTCTaGTGGTCAAACACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ASSKSSSVMSLRNSRSSQTMGEL*WSNTLD
Trigger: GTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGT...CTGGGACGACCTGGAGTTTCTCAGTGACATCACCGAGGAGGACTTGGAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTATTGTTCTTCATGAGCTaGAACAGCTGGCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVLFFMS*NSWQKA
Trigger: GGCCTTCTGCCAGCTGTTGCAGCTCATGAAGAACAA...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGATCGTCCTGCTTGGAGTaGTTGTTCTTCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRSSCLE*LFFMSC
Trigger: GCAGCTCATGAAGAACAAGCACTCCAAGCAGGACGA...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGTTGGCTTCTGCTTGTaGCAGGCATATGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPVGFCL*QAYVSR
Trigger: CCGGGACACATATGCCTGGCACAAGCAGAAGCCAAC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGTGAGCACCCCAGTTGGCTTCTaGTTGTGCCAGGCATATGTG +
Preference number: 4 (lower is better)
Translates to: PPLSLAELQGVQKEALVSTPVGF*LCQAYV
Trigger: CACATATGCCTGGCACAAGCAGAAGCCAACTGGGGT...GCTCACAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp TTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGTCACAATGGCCTCGATaGTCTCAAACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: LRLPRRLLARPCPGRGQLSQWPR*SQTQCR
Trigger: CCTACATTGAGTTTGAGAGCATCGAGGCCATTGTGA...CAGCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR GCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGAGGAGGTGCTGGTCCTaGAGGTACTCGATATCAGCC +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPRRCWS*RYSISA
Trigger: GGCTGATATCGAGTACCTGCAGGACCAGCACCTCCT...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCCTTCCCCCAGGAAAGTaGTGGCTGGTGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPLPPGK*WLVRGL
Trigger: CAGGCCCCTCACCAGCCAGCACTTTCCTGGGGGAAG...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGAGCGTCTTGGCCATCTaGAGCACCGAGCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWSVLAI*STEQDR
Trigger: CCGGTCCTGCTCGGTGCTGCAGATGGCCAAGACGCT...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTGCACGGAGCCTCCTCTaGCAGGTCTTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTARSLL*QVFLDA
Trigger: AGCATCCAGGAAGACCTGGCAGAGGAGGCTCCGTGC...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCCAGGCACTCATGCCTaGCTCGCCCAGCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGPGTHA*LAQPAG
Trigger: GCCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGG...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGTATCACTTGCTGAGCTaGAGGGTGTCCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWYHLLS*RVSRRR
Trigger: CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATA...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATTTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNFTASW*LRYHLL
Trigger: CAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAA...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCACCAATAATATTAAGGTaGTCTCCCTCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPPIILR*SPSPDP
Trigger: TGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGG...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTGTATTCCTCCAGGCAGGTAGAGTAGAACTCGATGAAGAACTTGGTGCGGCTGCCCAGGAGGCTGCTTaGAAGACCCTGTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: LVFLQAGRVELDEELGAAAQEAA*KTLSRA
Trigger: CGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGC...AGCCGCACCAAGTTCTTCATCGAGTTCTACTCTACCTGCCTGGAGGAATACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR GCA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATGTGATGTCACTCCTCTaGCAGGTCTTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYVMSLL*QVFLDA
Trigger: AGCATCCAGGAAGACCTGGCAGAGGAGTGACATCAC...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541752.1
CDS-3UTR CCA 90 bp TTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGCTCACCCAGGGTCTaGAAGCGGCGCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: FIEDITPQPLRLPRRLLASSPRV*KRRTGT
Trigger: TGTGCCTGTGCGCCGCTTCCAGACCCTGGGTGAGCT...TGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCGCGCACACAAGGCCCTaGTTGGGCTGGGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCAHTRP*LGWAYR
Trigger: CCTGTACGCCCAGCCCAACCAGGGCCTTGTGTGCGC...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTATGGGGGCAGAAATGCTaGTGGAGCCAGAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLWGQKC*WSQSAG
Trigger: CCCCGCGCTCTGGCTCCACCAGCATTTCTGCCCCCA...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298229.7
ENST00000538751.5
CDS-3UTR CCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTATAGCGGTAGGTGGGTaGGAAGGAGATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPIAVGG*EGDLLL
Trigger: GAGGAGGAGATCTCCTTCCCACCCACCTACCGCTAT...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAGGTCCGGACCCCAGTTaGCTTCTGCTTGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FIEDITPQPLRLPRRLLAGPDPS*LLLVPG
Trigger: GCCTGGCACAAGCAGAAGCCAACTGGGGTCCGGACC...TGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCAGAACTTGGTGCGGCTaGCTGTCTTCACAATGGCCT +
Preference number: 4 (lower is better)
Translates to: INPSPVLGLFLHFRTDTRRTWCG*LSSQWP
Trigger: AGGCCATTGTGAAGACAGCCAGCCGCACCAAGTTCT...GCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCGTTCTTCAAATAACCTaGAGAGCGGGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: INPSPVLGLFLHFRTDTRVLQIT*RAGRRP
Trigger: AGGCCTCCTGCCCGCTCTCCAGGTTATTTGAAGAAC...GCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACTGGGGGCCTCCCCGTTaGTGGCGGTTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHWGPPR*WRFLWF
Trigger: GAACCAGAGAAACCGCCACCAACGGGGAGGCCCCCA...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCCACTTTGTTCTTGGTaGCAGATGGGACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALPLCSW*QMGQGP
Trigger: GGGCCCCTGTCCCATCTGCCACCAAGAACAAAGTGG...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGTGGCCACTTTGTTCTTaGTGGCAGATGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: TASWCLRYHLLSCRVSRRWPLCS*WQMGQG
Trigger: CCCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCA...CCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp TTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAACACGAGGGTGCCGGTaGTGCCCAAGCTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FIEDITPQPLRLPRRLLATRGCR*CPSCGA
Trigger: TGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGT...TGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTAGGGCAGTGGAGGCCTTaGATGGGCCTTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLGQWRP*MGLGRW
Trigger: CCACCTCCCAAGGCCCATCCAAGGCCTCCACTGCCC...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAACCGGTCATCCCCACTaGCCACTTCCCCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARTGHPH*PLPPGK
Trigger: CTTTCCTGGGGGAAGTGGCCAGTGGGGATGACCGGT...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTCTGCCAGGTCTTCCTaGATGCTCTCCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWASARSS*MLSRMR
Trigger: CCGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGGGAGCTCCTCCGCTGTaGTTCAGGCCCGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLGAPPL*FRPGGR
Trigger: CCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACAGGGAGCTCTTTTGTaGCCTCCACAGCTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVQGALL*PPQLSK
Trigger: TTTAGACAGCTGTGGAGGCCACAAAAGAGCTCCCTG...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCCGGGCGTGGGCAGCTaGCGTGAAGACCACTGCACT +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLPGVGS*REDHCT
Trigger: AGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGG...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR TCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCATCCACGCTCAGCGTaGACTTCTGTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPHPRSA*TSVTSQ
Trigger: TTGGGAAGTCACAGAAGTTCACGCTGAGCGTGGATG...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTCCAGACCCTTCGATGTaGACCAGGATGTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPPDPSM*TRMSRF
Trigger: AAAACGTGACATCCTGGTTCACATCGAAGGGTCTGG...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCTCGCGGTCGCCCACTaGGTTCTCCTGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLLAVAH*VLLGPK
Trigger: TTTGGGACCCAGGAGAACTCAGTGGGCGACCGCGAG...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGTTTCCCGAGGTGAGGTaGCAATTCACAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPFPEVR*QFTKPN
Trigger: ATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAA...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGCAAACTCTTTCCTGCTaGTGTAGTTCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLQTLSC*CSSGSP
Trigger: AGGAGATCCTGAACTACATCAGCAGGAAAGAGTTTG...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTAAGATCTCCTCCTCACTaGATCGAAGGAAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: VQARWKAAETGESGGPDVRSPPH*IEGRPC
Trigger: ACAAGGTCTTCCTTCGATTCAGTGAGGAGGAGATCT...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTTGCCGATCATGGATTTaGGTGCAACCACACACTCCC +
Preference number: 4 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPCRSWI*VQPHTP
Trigger: GGGAGTGTGTGGTTGCACTCAAATCCATGATCGGCA...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATCATCCTTATCAATGCTaGTCCACTCGTAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNHPYQC*STRRAA
Trigger: AGCGGCTCTACGAGTGGATCAGCATTGATAAGGATG...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCCTGGCACTTTATGGCTaGGATCCTGCCCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWALALYG*DPAPPQ
Trigger: TTGGGGTGGGGCAGGATCTCAGCCATAAAGTGCCAG...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGACCATGGGCGAGCTCTaGTGGTCAAACACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALTMGEL*WSNTLD
Trigger: GTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGT...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGGGGCCTTCTTCTGGATaGCTGACAGGAAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWGPSSG*LTGSPL
Trigger: TAAAGGACTTCCTGTCAGGCATCCAGAAGAAGGCCC...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTGGGCCTTCTTCTGGATaGCTGACAGGAAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: DITPQPLRLPRRLLARPCGPSSG*LTGSPL
Trigger: TAAAGGACTTCCTGTCAGGCATCCAGAAGAAGGCCC...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTCTGATACGGTTCTCGTaGTCTGGCTTGACCAGCACT +
Preference number: 4 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPLIRFS*SGLTST
Trigger: AGTGCTGGTCAAGCCAGAGCACGAGAACCGTATCAG...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTACTGTGAGCAGGAGGTaGTGGTCCTGCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTTVSRR*WSCRYS
Trigger: CGAGTACCTGCAGGACCAGCACCTCCTGCTCACAGT...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAAAGAGCCGCTCACGGGTaGCCAGGCGCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQRAAHG*PGAPWA
Trigger: TGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCT...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATCTGGCCCGCCCGCCCTaGAGGCACGGAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNLARPP*RHGASS
Trigger: AGAGGAGGCTCCGTGCCTGCAGGGCGGGCGGGCCAG...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGTATCACTTGCTGAGCTaGAGGGTGTCCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TASWCLRYHLLSCRVSRRYHLLS*RVSRRR
Trigger: CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATA...CCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp CACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGTTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: HSFVVPPLSLAELQGVQKFTASW*LRYHLL
Trigger: CAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAA...CTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTTTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPLGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTTTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 4 (lower is better)
Translates to: VVPPLSLAELQGVQKEALLGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...AAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp TCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCCCAATAATATTAAGGTaGTCTCCCTCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: SWCLRYHLLSCRVSRRRRPIILR*SPSPDP
Trigger: TGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGG...GCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR GCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATAGCACCCCTTCCTCCTaGCAGCAAGCTCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNSTPSS*QQAQHP
Trigger: GGGGTGCTGAGCTTGCTGGCAGGAGGAAGGGGTGCT...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATAGCTCACCCAGGGTCTaGAAGCGGCGCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNSSPRV*KRRTGT
Trigger: TGTGCCTGTGCGCCGCTTCCAGACCCTGGGTGAGCT...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTGGTGGGGCAGGTGGCTaGCTCCACCCCTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSGGAGG*LHPSQL
Trigger: AAGCTGTGAGGGGTGGAGCCAGCCACCTGCCCCACC...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACAGGCCTGCACGGGGATaGTCTTGGCCTTACGTGTGG +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHRPARG*SWPYVW
Trigger: CCACACGTAAGGCCAAGACCATCCCCGTGCAGGCCT...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGTCCACAGTGATTGCATaGCAATCGGGCGGTAATCCA +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWSTVIA*QSGGNP
Trigger: TGGATTACCGCCCGATTGCCATGCAATCACTGTGGA...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGTGTTCCCCAGGGTGTTaGCGATGCCAGTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALCSPGC*RCQSSH
Trigger: GTGTGAAGACTGGCATCGCCAACACCCTGGGGAACA...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGATGGCTGTCTTCACAATaGCCTCGATGCTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRWLSSQ*PRCSQT
Trigger: AGTTTGAGAGCATCGAGGCCATTGTGAAGACAGCCA...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAATGTTGTCACTGCTCTaGGCATCATTCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPMLSLL*ASFSKL
Trigger: GAGCTTTGAGAATGATGCCCAGAGCAGTGACAACAT...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTTGAGCGTGGGCAGCTaGCGTGAAGACCACTGCACT +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWALSVGS*REDHCT
Trigger: AGTGCAGTGGTCTTCACGCCAGCTGCCCACGCTCAA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCGTGGTGCCCAAGCTGTaGAGCAGGCACTGTAATGGC +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAVVPKL*SRHCNG
Trigger: GCCATTACAGTGCCTGCTCCACAGCTTGGGCACCAC...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCCCCCAGGAAAGTGCTaGCTGGTGAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGPPGKC*LVRGLG
Trigger: CCCCAGGCCCCTCACCAGCCAGCACTTTCCTGGGGG...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACTCCCGGATGCGGGGTaGAGGGAAGCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQLPDAG*REAEGP
Trigger: CGGCCCCTCAGCTTCCCTCCACCCCGCATCCGGGAG...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCTCCCGGATGCGGGGTaGAGGGAAGCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPLPDAG*REAEGP
Trigger: CGGCCCCTCAGCTTCCCTCCACCCCGCATCCGGGAG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGCTCCCGGATGCGGGGTaGAGGGAAGCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWLPDAG*REAEGP
Trigger: CGGCCCCTCAGCTTCCCTCCACCCCGCATCCGGGAG...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACTCTGCCAGGTCTTCCTaGATGCTCTCCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHSARSS*MLSRMR
Trigger: CCGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGA...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTAGCGCTCCAAGCCGATaGCCCGCAGCCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSSAPSR*PAARHS
Trigger: TGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCT...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGGTGGTTCAGGCCCGGTaGAAGGCCGCAGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMVVQAR*KAAETG
Trigger: ACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCAC...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATCCTGGTGTTGCCTATTaGGCAGGAATGACCAGAACA +
Preference number: 4 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYPGVAY*AGMTRT
Trigger: TGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGG...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCTCCTCCAAGTCCTCCTCGGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGACAGGGTTAATGATGTaGCCGGTCCACTTCCACCCT +
Preference number: 4 (lower is better)
Translates to: ASSKSSSVMSLRNSRSSQTGLMM*PVHFHP
Trigger: AGGGTGGAAGTGGACCGGCCACATCATTAACCCTGT...CTGGGACGACCTGGAGTTTCTCAGTGACATCACCGAGGAGGACTTGGAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGAATCCGGTCACACCATaGGGGCACATTGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWNPVTP*GHIGPD
Trigger: GTCCGGACCAATGTGCCCTCATGGTGTGACCGGATT...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATCCGGTCACACCATaGGGGCACATTGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPNPVTP*GHIGPD
Trigger: GTCCGGACCAATGTGCCCTCATGGTGTGACCGGATT...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTGCAGCCGCCGCTGCCTaGAGCGCCGGCCTCAACTTG +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFAAAAA*SAGLNL
Trigger: CAAGTTGAGGCCGGCGCTGCAGGCAGCGGCGGCTGC...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298229.7
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGTTCACCTCAAAGGCCTaGACGGGGATGGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWFTSKA*TGMVLA
Trigger: GGCCAAGACCATCCCCGTGCAGGCCTTTGAGGTGAA...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGATGTCGGGCTCGTCCTaGTTGGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALMSGSS*LECLFF
Trigger: GAAGAACAAGCACTCCAAGCAGGACGAGCCCGACAT...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGTGGCTTGACCAGCACTaGCACCTTGATATTCCACAG +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPWLDQH*HLDIPQ
Trigger: CTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCA...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATTCAAAGGCATTGAGCTaGCGGTCGCCCAGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNSKALS*RSPSES
Trigger: GCTCTCGCTGGGCGACCGGCAGCTCAATGCCTTTGA...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAAGGAGGTGCTGGTCCTaGAGGTACTCGATATCAGCC +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARRRCWS*RYSISA
Trigger: GGCTGATATCGAGTACCTGCAGGACCAGCACCTCCT...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGATCATGGATTTGAGTaGAACCACACACTCCCCATA +
Preference number: 4 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKDHGFE*NHTLPI
Trigger: TATGGGGAGTGTGTGGTTGCACTCAAATCCATGATC...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCGAGGGTGCCGGTGGTaGCCAAGCTGTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPRGCRW*PSCGAG
Trigger: GCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTCTCCCACACGAGGGTaGCGGTGGTGCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSSPTRG*RWCPSC
Trigger: ACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGA...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGGAGTCTCAGGAGCTaGCAGGGGACTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWGSLRS*QGTAGP
Trigger: GGGCCCAGCAGTCCCCTGCCAGCTCCTGAGACTCCC...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTGGATGGCTGCGGAGCTaGGGGTGCTGTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSGWLRS*GCCGAH
Trigger: ATGAGCTCCACAGCACCCCCAGCTCCGCAGCCATCC...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGCCATTATGCACCAGGCCCTCTTGTTCTGGACACGCTaGGACTTAATGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GDVTEKLQVVPAIMHQALLFWTR*DLMSWR
Trigger: CCGCCAGCTCATTAAGTCCCAGCGTGTCCAGAACAA...GAGGGCCTGGTGCATAATGGCTGGGACGACCTGGAGTTTCTCAGTGACATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAATGAGCTGCAACAGCTaGCAGAAGGCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQMSCNS*QKASRF
Trigger: GAAGCGGGAGGCCTTCTGCCAGCTGTTGCAGCTCAT...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCGCTCATAGCGGTAGGTaGGTGGGAAGGAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAAHSGR*VGRRSP
Trigger: AGGAGATCTCCTTCCCACCCACCTACCGCTATGAGC...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGGTCTCCTCGCCACGGTaGGATAGGAAGGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMVSSPR*DRKVRN
Trigger: GTTCCTGACCTTCCTATCCCACCGTGGCGAGGAGAC...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCGGGCCTCCCCGTTGGTaGCGGTTTCTCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCGPPRW*RFLWFF
Trigger: GAAGAACCAGAGAAACCGCCACCAACGGGGAGGCCC...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCACCACTTTGTTCTTGGTaGCAGATGGGACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FIEDITPQPLRLPRRLLAPLCSW*QMGQGP
Trigger: GGGCCCCTGTCCCATCTGCCACCAAGAACAAAGTGG...TGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTGGCCACTTTGTTCTTaGTGGCAGATGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAWPLCS*WQMGQG
Trigger: CCCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGGTGGTGCCCAAGCTGTaGAGCAGGCACTGTAATGGC +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMVVPKL*SRHCNG
Trigger: GCCATTACAGTGCCTGCTCCACAGCTTGGGCACCAC...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HSFVVPPLSLAELQGVQKITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...CTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CACAGCTTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGGCATTGCAAATGATTaGGCAGCGGGGAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: HSFVVPPLSLAELQGVQKGIAND*AAGNAD
Trigger: ATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCC...CTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTAGTGGTTCAGGCCCGGTaGAAGGCCGCAGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLVVQAR*KAAETG
Trigger: ACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCAC...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCGTGGTTCAGGCCCGGTaGAAGGCCGCAGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCVVQAR*KAAETG
Trigger: ACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCAC...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCGGAGCTCCTCCGCTGTaGTTCAGGCCCGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGGAPPL*FRPGGR
Trigger: CCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCACCCCCAGCGGGGGTaGGGAGGTCTTAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPHPQRG*GGLSGA
Trigger: AGCTCCGCTAAGACCTCCCCACCCCCGCTGGGGGTG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCTGTCACCCCCAGGCTaGGGTCTAAGACCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHLSPPG*GLRPKA
Trigger: TGCTTTGGGTCTTAGACCCCAGCCTGGGGGTGACAG...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTTTTCCCGAGGTGAGGTaGCAATTCACAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SSSAVVQARWKAAETGESFPEVR*QFTKPN
Trigger: ATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAA...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGTTTCCCGAGGTGAGGTaGCAATTCACAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RWKAAETGESGGPDVPKWFPEVR*QFTKPN
Trigger: ATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAA...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGGGAATGGTCGCTGGTaGCGATGTCATCAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWGNGRW*RCHQCN
Trigger: GTTGCACTGATGACATCGTCACCAGCGACCATTCCC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CTTGTATTCCTCCAGGCAGGTAGAGTAGAACTCGATGAAGAACTTGGTGCGGCTCGTGGGCAGCTGGCGTaGAGACCACTGCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: LVFLQAGRVELDEELGAARGQLA*RPLHFE
Trigger: CTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACG...AGCCGCACCAAGTTCTTCATCGAGTTCTACTCTACCTGCCTGGAGGAATACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR TCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTCGTGGGCAGCTGGCGTaGAGACCACTGCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSRGQLA*RPLHFE
Trigger: CTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACG...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCACCTTCATGGAGCCTCTaGTATTGCCTGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: FIEDITPQPLRLPRRLLAPSWSL*YCLSPR
Trigger: GCGAGGAGACAGGCAATATCAGAGGCTCCATGAAGG...TGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGGCAGGAAGATGGCTaGGTCCGGCAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWGQEDG*VRQWWR
Trigger: CCTCCACCACTGCCGGACTCAGCCATCTTCCTGCCC...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAAGGGCAGGAAGATGGCTaGGTCCGGCAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQGQEDG*VRQWWR
Trigger: CCTCCACCACTGCCGGACTCAGCCATCTTCCTGCCC...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGAGAAGGAGGCGCTTGTaGGCCGGGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWRRRRL*AGSCTP
Trigger: TGGGGTGCAGGACCCGGCTCACAAGCGCCTCCTTCT...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAATCCGCTATCACTTGCTaGGCTGCAGGGTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQSAITC*AAGCPE
Trigger: TTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGA...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCGGCCGCAGAAACTGGTaGAAGTGGGGGCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGGRRNW*KWGPRR
Trigger: ACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCC...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTAGTCGTGCGAGACGGTaGTCAGCCCATTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSSRARR*SAHWEH
Trigger: GTGCTCCCAATGGGCTGAGCACCGTCTCGCACGACT...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACTTGTCCACCTCACTGTaGAGCCTCCGGCATGAGGTA +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHLSTSL*SLRHEV
Trigger: TACCTCATGCCGGAGGCTGCACAGTGAGGTGGACAA...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCGGCAGGTTCTGCTGCTaGAAAAGGCGGGTCACCATG +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCGRFCC*KRRVTM
Trigger: CATGGTGACCCGCCTTTTGCAGCAGCAGAACCTGCC...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTAGTCTGTGGCAGGTTCTaGTGCTGCAAAAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLVCGRF*CCKRRV
Trigger: GACCCGCCTTTTGCAGCAGCAGAACCTGCCACAGAC...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCCTGATACGGTTCTCGTaGTCTGGCTTGACCAGCACT +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWALIRFS*SGLTST
Trigger: AGTGCTGGTCAAGCCAGAGCACGAGAACCGTATCAG...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGATTTGCTCTTTGCTCCTaGCTCATCCTTATCAATGCT +
Preference number: 4 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRFALCS*LILINA
Trigger: AGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAA...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTFTASW*LRYHLL
Trigger: CAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCCGCAACCCTTACGACTaGCCAGGAGGCTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCRNPYD*PGGCLQ
Trigger: TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCG...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCCCACCCTCCTGGTGTTaGCTATTGGGCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPPPSWC*LLGRND
Trigger: GTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGG...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGATCCCGGTCATCCGGTaGGTCCGGCTCTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWIPVIR*VRLSLT
Trigger: GGTGAGCGAGAGCCGGACCCACCGGATGACCGGGAT...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGAGCACTCTCAGCAGCTaGAGCTGTGGGAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLSTLSS*SCGSLR
Trigger: CCTGAGACTCCCACAGCTCCAGCTGCTGAGAGTGCT...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGTGGGACTTAATGAGCTaGCGGATGCGGTCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLWDLMS*RMRSCV
Trigger: CACGCACGACCGCATCCGCCAGCTCATTAAGTCCCA...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGACACCCAGCTTGTTCTaGACACGCTGGGACTTAATG +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALTPSLF*TRWDLM
Trigger: CATTAAGTCCCAGCGTGTCCAGAACAAGCTGGGTGT...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGTCCACAGTGATTGCATaGCAATCGGGCGGTAATCCA +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALSTVIA*QSGGNP
Trigger: TGGATTACCGCCCGATTGCCATGCAATCACTGTGGA...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACTGGACGTACTGACATaGCTGATACGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARLDVLT*LIRFSC
Trigger: GCACGAGAACCGTATCAGCCATGTCAGTACGTCCAG...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGGCTCATAGCGGTAGGTaGGTGGGAAGGAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMAHSGR*VGRRSP
Trigger: AGGAGATCTCCTTCCCACCCACCTACCGCTATGAGC...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGCCTGACCTGGGCTCCTaGCTCCCTCGGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWPDLGS*LPRDTE
Trigger: CTCTGTGTCCCGAGGGAGCCAGGAGCCCAGGTCAGG...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCTTCAGGAGCTCCCTCTaGCTTCAACCTGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPFRSSL*LQPGGQ
Trigger: TTGACCCCCAGGTTGAAGCCAGAGGGAGCTCCTGAA...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAAAGCGCTCCAAGCCGATaGCCCGCAGCCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQSAPSR*PAARHS
Trigger: TGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCT...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGGGCATTGCAAATGATTaGGCAGCGGGGAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALGIAND*AAGNAD
Trigger: ATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCC...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCGGGGTATGGTCACTGTaGCCTCGTCCAGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGGVWSL*PRPGSS
Trigger: GGAAGACCCTGGACGAGGTCACAGTGACCATACCCC...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCTCGCGGTCGCCCACTaGGTTCTCCTGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPLAVAH*VLLGPK
Trigger: TTTGGGACCCAGGAGAACTCAGTGGGCGACCGCGAG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAATTCACAAAGCCAAATaGGGTGCCATTAAACATGAA +
Preference number: 4 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPIHKAK*GAIKHE
Trigger: TTCATGTTTAATGGCACCTCATTTGGCTTTGTGAAT...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATCATAAGAATTGCAGATaGTGTGAGTTTCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNHKNCR*CEFQGR
Trigger: CCTACCCTGAAACTCACATCATCTGCAATTCTTATG...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGTAGGCAGGGTTATTaGAGCTGTTCTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FIEDITPQPLRLPRRLLASRQGY*SCSWVG
Trigger: CCCCACCCAAGAACAGCTTCAATAACCCTGCCTACT...TGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTAGAAGGAGGCGCTTGTaGGCCGGGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFRRRRL*AGSCTP
Trigger: TGGGGTGCAGGACCCGGCTCACAAGCGCCTCCTTCT...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATTCCGCTATCACTTGCTaGGCTGCAGGGTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNSAITC*AAGCPE
Trigger: TTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGA...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACTTAGGGCATTGCAAATaGTTGGGCAGCGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHLGHCK*LGSGEC
Trigger: GCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAA...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGACCATGGGCGAGCTCTaGTGGTCAAACACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLTMGEL*WSNTLD
Trigger: GTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGT...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAATGGCGGATGCGGTCGTaGGTGAAGGTGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQWRMRS*VKVVQS
Trigger: GGACTGGACCACCTTCACGCACGACCGCATCCGCCA...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGTGGCGGATGCGGTCGTaGGTGAAGGTGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWWRMRS*VKVVQS
Trigger: GGACTGGACCACCTTCACGCACGACCGCATCCGCCA...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTGTTCTTCATGAGCTaGAACAGCTGGCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTLFFMS*NSWQKA
Trigger: GGCCTTCTGCCAGCTGTTGCAGCTCATGAAGAACAA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGATGTCGGGCTCGTCCTaGTTGGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMMSGSS*LECLFF
Trigger: GAAGAACAAGCACTCCAAGCAGGACGAGCCCGACAT...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTTCACAATGGCCTCGATaGTCTCAAACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPSQWPR*SQTQCR
Trigger: CCTACATTGAGTTTGAGAGCATCGAGGCCATTGTGA...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGATCATGGATTTGAGTaGAACCACACACTCCCCATA +
Preference number: 4 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPDHGFE*NHTLPI
Trigger: TATGGGGAGTGTGTGGTTGCACTCAAATCCATGATC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATTTTGCTCTTTGCTCCTaGCTCATCCTTATCAATGCT +
Preference number: 4 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNFALCS*LILINA
Trigger: AGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAA...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGGGGGCTTTGCTCTTTaGTCCTGCCTCATCCTTATC +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWGGFAL*SCLILI
Trigger: GATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCCAGGTCTTCCTGGATaGTCTCCCGGATGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPPGLPG*SPGCGV
Trigger: CACCCCGCATCCGGGAGAGCATCCAGGAAGACCTGG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCTATCACTTGCTGAGCTaGAGGGTGTCCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPYHLLS*RVSRRR
Trigger: CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATA...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWALGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGTTCCCTAAAACCACCTaGCCAGGCTGCACAGGGTTA +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWFPKTT*PGCTGL
Trigger: TAACCCTGTGCAGCCTGGGCAGGTGGTTTTAGGGAA...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTAGCACTCTCAGCAGCTaGAGCTGTGGGAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSSTLSS*SCGSLR
Trigger: CCTGAGACTCCCACAGCTCCAGCTGCTGAGAGTGCT...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAGGGTACGGGTGAGGTaGGGCAGGTGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNRVRVR*GRWLAP
Trigger: TGGAGCCAGCCACCTGCCCCACCTCACCCGTACCCT...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGTGACTTCCCAATCTTaGTCAGGTCACCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQVTSQS*SGHPGS
Trigger: TGACCCTGGGTGACCTGACCAAGATTGGGAAGTCAC...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCTTGTTCTGGACACGCTaGGACTTAATGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPLFWTR*DLMSWR
Trigger: CCGCCAGCTCATTAAGTCCCAGCGTGTCCAGAACAA...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAACACCCAGCTTGTTCTaGACACGCTGGGACTTAATG +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARTPSLF*TRWDLM
Trigger: CATTAAGTCCCAGCGTGTCCAGAACAAGCTGGGTGT...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGCTGGACGTACTGACATaGCTGATACGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMLDVLT*LIRFSC
Trigger: GCACGAGAACCGTATCAGCCATGTCAGTACGTCCAG...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTATGTTGTCACTGCTCTaGGCATCATTCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPMLSLL*ASFSKL
Trigger: GAGCTTTGAGAATGATGCCCAGAGCAGTGACAACAT...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCAAGGTCAGGAACTGTTaGGCCGTGCTGCCGATCATG +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCKVRNC*AVLPIM
Trigger: CATGATCGGCAGCACGGCCCAACAGTTCCTGACCTT...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCGTTCTTCAAATAACCTaGAGAGCGGGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPVLQIT*RAGRRP
Trigger: AGGCCTCCTGCCCGCTCTCCAGGTTATTTGAAGAAC...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTGGCCGCCACCCCTTCTaGTTCAGGAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFGRHPF*FRSSLW
Trigger: CCAGAGGGAGCTCCTGAACCAGAAGGGGTGGCGGCC...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCGTTCTTGGTGGCAGATaGGACAGGGGCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPVLGGR*DRGPGR
Trigger: CCTGCCAGGGCCCCTGTCCCATCTGCCACCAAGAAC...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCTCGCTCAGCGTCTTaGCCATCTGCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQPRSAS*PSAAPS
Trigger: GCTCGGTGCTGCAGATGGCCAAGACGCTGAGCGAGG...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWEFTAS*CLRYHL
Trigger: CAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTG +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQEFTAS*CLRYHL
Trigger: CAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTC...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWAITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAACAGCGTGAACTTCTGTaGCTTCCCAATCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQQRELL*LPNLGQ
Trigger: CTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTG...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCAGCGTGAACTTCTGTaGCTTCCCAATCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHQRELL*LPNLGQ
Trigger: CTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTG...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATGGATGCGGTCGTGCGTaGAGGTGGTCCAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNGCGRA*RWSSPP
Trigger: AGGAGGACTGGACCACCTTCACGCACGACCGCATCC...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTCTCATTTCCCGAGGTaGGGTGACAATTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTSHFPR*GDNSQS
Trigger: GCTTTGTGAATTGTCACCTCACCTCGGGAAATGAGA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTCTCATTTCCCGAGGTaGGGTGACAATTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: RDTALTLITFQPWGHSWASHFPR*GDNSQS
Trigger: GCTTTGTGAATTGTCACCTCACCTCGGGAAATGAGA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGAGATGTCAAAGGCATTaGGCTGCCGGTCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWRCQRH*AAGRPA
Trigger: CGCTGGGCGACCGGCAGCTCAATGCCTTTGACATCT...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGCGTGGGCAGCTGGCGTaGAGACCACTGCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWRGQLA*RPLHFE
Trigger: CTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACG...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCCATCCTTATCAATGCTaGTCCACTCGTAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPHPYQC*STRRAA
Trigger: AGCGGCTCTACGAGTGGATCAGCATTGATAAGGATG...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATAGTAGGCAGGGTTATTaGAGCTGTTCTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNSRQGY*SCSWVG
Trigger: CCCCACCCAAGAACAGCTTCAATAACCCTGCCTACT...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAAAGCAGGGAGGGGCTCTaGGTTCACAGCTTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQSREGL*VHSFVV
Trigger: CACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCT...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR TCA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTATTAGGGCATTGCAAATaGTTGGGCAGCGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLLGHCK*LGSGEC
Trigger: GCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAA...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGCCAAGTCCTCCTCGGTaGTGTCACTGTGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWPSPPR*CHCGVK
Trigger: TTTTACTCCACAGTGACATCACCGAGGAGGACTTGG...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320683.7
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGCTCCATCAGGCAGAATaGGATACGTGTGCACATGCT +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWLHQAE*DTCAHA
Trigger: AGCATGTGCACACGTATCGCATTCTGCCTGATGGAG...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACACACCCTGCGAGGTCTaGACAGCCAAGAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHTPCEV*TAKKSS
Trigger: AGAAGATTTCTTGGCTGTGCAGACCTCGCAGGGTGT...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTGTCCACCTCACTGTaGAGCCTCCGGCATGAGGTA +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSLSTSL*SLRHEV
Trigger: TACCTCATGCCGGAGGCTGCACAGTGAGGTGGACAA...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGGGGCCTTCTTCTGGATaGCTGACAGGAAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMGPSSG*LTGSPL
Trigger: TAAAGGACTTCCTGTCAGGCATCCAGAAGAAGGCCC...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAATTGTTCTTCATGAGCTaGAACAGCTGGCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQLFFMS*NSWQKA
Trigger: GGCCTTCTGCCAGCTGTTGCAGCTCATGAAGAACAA...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGTTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWLGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTATGGGCGAGCTCTGCTaGTCAAACACCTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSMGELC*SNTLDR
Trigger: CCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCAT...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCGAGCTGGGGGTGCTGTaGAGCTCATGTCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPELGVL*SSCPVG
Trigger: CCCTACAGGACATGAGCTCCACAGCACCCCCAGCTC...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATGTGACTTCCCAATCTTaGTCAGGTCACCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNVTSQS*SGHPGS
Trigger: TGACCCTGGGTGACCTGACCAAGATTGGGAAGTCAC...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCACACCCAGCTTGTTCTaGACACGCTGGGACTTAATG +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPTPSLF*TRWDLM
Trigger: CATTAAGTCCCAGCGTGTCCAGAACAAGCTGGGTGT...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTGGTCCGGACCCCAGTTaGCTTCTGCTTGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFGPDPS*LLLVPG
Trigger: GCCTGGCACAAGCAGAAGCCAACTGGGGTCCGGACC...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTCCAAACACGGGGGAATaGTCGCTGGTGACGATGTCA +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSPNTGE*SLVTMS
Trigger: TGACATCGTCACCAGCGACCATTCCCCCGTGTTTGG...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGATGGCTGTCTTCACAATaGCCTCGATGCTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: IEDITPQPLRLPRRLLARWLSSQ*PRCSQT
Trigger: AGTTTGAGAGCATCGAGGCCATTGTGAAGACAGCCA...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCTTGAGCGTGGGCAGCTaGCGTGAAGACCACTGCACT +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGLSVGS*REDHCT
Trigger: AGTGCAGTGGTCTTCACGCCAGCTGCCCACGCTCAA...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTTGGGGGCCTCCCCGTTaGTGGCGGTTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFWGPPR*WRFLWF
Trigger: GAACCAGAGAAACCGCCACCAACGGGGAGGCCCCCA...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTAGTGGAGGCCTTGGATaGGCCTTGGGAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFSGGLG*ALGGGG
Trigger: CCCACCACCTCCCAAGGCCCATCCAAGGCCTCCACT...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCACCGGTCATCCCCACTaGCCACTTCCCCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPTGHPH*PLPPGK
Trigger: CTTTCCTGGGGGAAGTGGCCAGTGGGGATGACCGGT...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGATAACTTTTCAACCCTaGGGCCATAGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMITFQP*GHSWAL
Trigger: CAAGGCCCAGCTATGGCCCCAGGGTTGAAAAGTTAT...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCCAGACGTACCCAAATaGACCCCCACAGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPPDVPK*TPTGTP
Trigger: AGGGGTGCCTGTGGGGGTCCATTTGGGTACGTCTGG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCAGACGTACCCAAATaGACCCCCACAGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQPDVPK*TPTGTP
Trigger: AGGGGTGCCTGTGGGGGTCCATTTGGGTACGTCTGG...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATCAGCGTGAACTTCTGTaGCTTCCCAATCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNQRELL*LPNLGQ
Trigger: CTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTG...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCATAAGAATTGCAGATaGTGTGAGTTTCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PSVLSLKGEGQDALIRALHKNCR*CEFQGR
Trigger: CCTACCCTGAAACTCACATCATCTGCAATTCTTATG...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTCCGCTATCACTTGCTaGGCTGCAGGGTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGSAITC*AAGCPE
Trigger: TTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGA...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGCTGGCACTTTATGGCTaGGATCCTGCCCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWLALYG*DPAPPQ
Trigger: TTGGGGTGGGGCAGGATCTCAGCCATAAAGTGCCAG...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCCTCCATCAGGCAGAATaGGATACGTGTGCACATGCT +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCLHQAE*DTCAHA
Trigger: AGCATGTGCACACGTATCGCATTCTGCCTGATGGAG...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCACACCCTGCGAGGTCTaGACAGCCAAGAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCTPCEV*TAKKSS
Trigger: AGAAGATTTCTTGGCTGTGCAGACCTCGCAGGGTGT...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAGTCGTGCGAGACGGTaGTCAGCCCATTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNSRARR*SAHWEH
Trigger: GTGCTCCCAATGGGCTGAGCACCGTCTCGCACGACT...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTCACAATGGCCTCGATaGTCTCAAACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTSQWPR*SQTQCR
Trigger: CCTACATTGAGTTTGAGAGCATCGAGGCCATTGTGA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCATGAGCTGCAACAGCTaGCAGAAGGCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPMSCNS*QKASRF
Trigger: GAAGCGGGAGGCCTTCTGCCAGCTGTTGCAGCTCAT...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGTCCGGACCCCAGTTaGCTTCTGCTTGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGGPDPS*LLLVPG
Trigger: GCCTGGCACAAGCAGAAGCCAACTGGGGTCCGGACC...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAATCCGGGGGCAGCAGCTaGTGCGGGACCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKSGGSS*CGTPSR
Trigger: CCTTGAAGGGGTCCCGCACCAGCTGCTGCCCCCGGA...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGGCCACTTTGTTCTTaGTGGCAGATGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGWPLCS*WQMGQG
Trigger: CCCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCA...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAACACGAGGGTGCCGGTaGTGCCCAAGCTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGTRGCR*CPSCGA
Trigger: TGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGT...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTACCGGTCATCCCCACTaGCCACTTCCCCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFTGHPH*PLPPGK
Trigger: CTTTCCTGGGGGAAGTGGCCAGTGGGGATGACCGGT...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTTCTGCCAGGTCTTCCTaGATGCTCTCCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFSARSS*MLSRMR
Trigger: CCGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGA...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATTCTGCCAGGTCTTCCTaGATGCTCTCCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNSARSS*MLSRMR
Trigger: CCGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGA...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGTCGGTGATGTCACTGTaGAGTAAAACAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QRDTALTLITFQPWGHSWSVMSL*SKTGWE
Trigger: TTCCCAGCCTGTTTTACTCCACAGTGACATCACCGA...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320683.7
CDS-3UTR CCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAGGGAGCTCTTTTGTaGCCTCCACAGCTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLQGALL*PPQLSK
Trigger: TTTAGACAGCTGTGGAGGCCACAAAAGAGCTCCCTG...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
3UTR CAA 72 bp GGCAGCTGGCGTGAAGACCACTGCACTTTGAGGAAGTaGATGTTGTCACTGCTCTGGGCATCATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GSWREDHCTLRK*MLSLLWASFSK
Trigger: CTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR GCA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTGGCTTGACCAGCACTaGCACCTTGATATTCCACAG +
Preference number: 4 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSWLDQH*HLDIPQ
Trigger: CTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCA...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACGAAGGAAGACCTTGTaGTTCTCCCGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQRRKTL*FSRSRL
Trigger: CAACCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCG...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATCGCAACCCTTACGACTaGCCAGGAGGCTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNRNPYD*PGGCLQ
Trigger: TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCG...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCATGGGCGAGCTCTGCTaGTCAAACACCTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPMGELC*SNTLDR
Trigger: CCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCAT...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GATGCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCTTCTTGGAGATGAACTaGGAGGTAACTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: DALIRALQMIGQRGMQIPFLEMN*EVTPTS
Trigger: TGAGGTTGGAGTTACCTCCCAGTTCATCTCCAAGAA...GGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCAGAACTTGGTGCGGCTaGCTGTCTTCACAATGGCCT +
Preference number: 4 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGRTWCG*LSSQWP
Trigger: AGGCCATTGTGAAGACAGCCAGCCGCACCAAGTTCT...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGATGTTGTCACTGCTCTaGGCATCATTCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VLSLKGEGQDALIRALQMMLSLL*ASFSKL
Trigger: GAGCTTTGAGAATGATGCCCAGAGCAGTGACAACAT...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTTCAGGAGCTCCCTCTaGCTTCAACCTGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPFRSSL*LQPGGQ
Trigger: TTGACCCCCAGGTTGAAGCCAGAGGGAGCTCCTGAA...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTG +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGEFTAS*CLRYHL
Trigger: CAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTC...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAACCCTGGGGCCATAGCTaGGCCTTGGTAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKPWGHS*ALVAGR
Trigger: CCTCCCTGCTACCAAGGCCCAGCTATGGCCCCAGGG...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCCAGACCCTTCGATGTaGACCAGGATGTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGPDPSM*TRMSRF
Trigger: AAAACGTGACATCCTGGTTCACATCGAAGGGTCTGG...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCCTTGATATTCCACAGTaGTTGCATGGCAATCGGGCG +
Preference number: 4 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGLDIPQ*LHGNRA
Trigger: CGCCCGATTGCCATGCAATCACTGTGGAATATCAAG...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCCAAACTCTTTCCTGCTaGTGTAGTTCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCQTLSC*CSSGSP
Trigger: AGGAGATCCTGAACTACATCAGCAGGAAAGAGTTTG...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGTCTGTGGCAGGTTCTaGTGCTGCAAAAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGVCGRF*CCKRRV
Trigger: GACCCGCCTTTTGCAGCAGCAGAACCTGCCACAGAC...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAAACCCCAGTTGGCTTCTaGTTGTGCCAGGCATATGTG +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQTPVGF*LCQAYV
Trigger: CACATATGCCTGGCACAAGCAGAAGCCAACTGGGGT...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATTCACAATGGCCTCGATaGTCTCAAACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNSQWPR*SQTQCR
Trigger: CCTACATTGAGTTTGAGAGCATCGAGGCCATTGTGA...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAACCAGGTCTTCCTGGATaGTCTCCCGGATGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKPGLPG*SPGCGV
Trigger: CACCCCGCATCCGGGAGAGCATCCAGGAAGACCTGG...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAATATCACTTGCTGAGCTaGAGGGTGTCCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQYHLLS*RVSRRR
Trigger: CCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATA...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAATTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQFTASW*LRYHLL
Trigger: CAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAA...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGTTCACAGCTTCGTGGTaGCTCCGCTATCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWFTASW*LRYHLL
Trigger: CAGCAAGTGATAGCGGAGGCACCACGAAGCTGTGAA...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCTTGGGCAGCGGGGAATaGAGATCCCCAATAAATAGG +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGLGSGE*RSPINR
Trigger: CCTATTTATTGGGGATCTGCATTCCCCGCTGCCCAA...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATTGTTCCCCAGGGTGTTaGCGATGCCAGTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNCSPGC*RCQSSH
Trigger: GTGTGAAGACTGGCATCGCCAACACCCTGGGGAACA...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGTTCTTGGAGATGAACTaGGAGGTAACTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLFLEMN*EVTPTS
Trigger: TGAGGTTGGAGTTACCTCCCAGTTCATCTCCAAGAA...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAACCTCGCTCAGCGTCTTaGCCATCTGCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKPRSAS*PSAAPS
Trigger: GCTCGGTGCTGCAGATGGCCAAGACGCTGAGCGAGG...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGAGTTCACAGCTTCGTaGTGCCTCCGCTATCACTTG +
Preference number: 4 (lower is better)
Translates to: PINRQRDTALTLITFQPWEFTAS*CLRYHL
Trigger: CAAGTGATAGCGGAGGCACCACGAAGCTGTGAACTC...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCGGCATTGCAAATGATTaGGCAGCGGGGAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGGIAND*AAGNAD
Trigger: ATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCC...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCTGGAGTAAAACAGGCTaGGAAGTGAGATGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: INRQRDTALTLITFQPWGWSKTG*EVRWAR
Trigger: CCTTGCCCATCTCACTTCCCAGCCTGTTTTACTCCA...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320683.7
3UTR CAA 72 bp TGGCGTGAAGACCACTGCACTTTGAGGAAGTTGATGTaGTCACTGCTCTGGGCATCATTCTCAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: WREDHCTLRKLM*SLLWASFSKLF
Trigger: GAAGAGCTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR TCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAAGGGGTATGGTCACTGTaGCCTCGTCCAGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKGVWSL*PRPGSS
Trigger: GGAAGACCCTGGACGAGGTCACAGTGACCATACCCC...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAAAGATGTCAAAGGCATTaGGCTGCCGGTCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKRCQRH*AAGRPA
Trigger: CGCTGGGCGACCGGCAGCTCAATGCCTTTGACATCT...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp GCCCTAATTAGGGCATTGCAAATGATTGGGCAGCGGGGAATGCAGATCCCCAATCATAAGAATTGCAGATaGTGTGAGTTTCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ALIRALQMIGQRGMQIPNHKNCR*CEFQGR
Trigger: CCTACCCTGAAACTCACATCATCTGCAATTCTTATG...ATTGGGGATCTGCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAATTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCATCCTTATCAATGCTaGTCCACTCGTAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPHPYQC*STRRAA
Trigger: AGCGGCTCTACGAGTGGATCAGCATTGATAAGGATG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAGTAGGCAGGGTTATTaGAGCTGTTCTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNSRQGY*SCSWVG
Trigger: CCCCACCCAAGAACAGCTTCAATAACCCTGCCTACT...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATTTAGGGCATTGCAAATaGTTGGGCAGCGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNLGHCK*LGSGEC
Trigger: GCATTCCCCGCTGCCCAATCATTTGCAATGCCCTAA...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGTAACCATGGCAACTaGCCTTCCGTCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGGNHGN*PSVLSL
Trigger: TAGGCTCAGGACGGAAGGTCAGTTGCCATGGTTACC...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGACGAAGGAAGACCTTGTaGTTCTCCCGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGRRKTL*FSRSRL
Trigger: CAACCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCG...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAATCCACAGTGATTGCATaGCAATCGGGCGGTAATCCA +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQSTVIA*QSGGNP
Trigger: TGGATTACCGCCCGATTGCCATGCAATCACTGTGGA...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TTAAATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACATTCACAAAGCCAAATaGGGTGCCATTAAACATGAA +
Preference number: 4 (lower is better)
Translates to: LNKPQPGPRAIPSFPDGHIHKAK*GAIKHE
Trigger: TTCATGTTTAATGGCACCTCATTTGGCTTTGTGAAT...GTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAATTCACAAAGCCAAATaGGGTGCCATTAAACATGAA +
Preference number: 4 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQIHKAK*GAIKHE
Trigger: TTCATGTTTAATGGCACCTCATTTGGCTTTGTGAAT...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCCAAACTCTTTCCTGCTaGTGTAGTTCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGQTLSC*CSSGSP
Trigger: AGGAGATCCTGAACTACATCAGCAGGAAAGAGTTTG...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR TCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCAGATCTCCTCCTCACTaGATCGAAGGAAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPRSPPH*IEGRPC
Trigger: ACAAGGTCTTCCTTCGATTCAGTGAGGAGGAGATCT...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAAGGTCCAGCCCATAGCTaGCTTTCAGGTAGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKGPAHS*LSGSRA
Trigger: CGCACGACTACCTGAAAGGCAGCTATGGGCTGGACC...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAAAGGCTCTCTAGTTCCTaGTCCCCTGTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKRLSSS*SPVCGR
Trigger: CCTGCCACAGACAGGGGAGCAGGAACTAGAGAGCCT...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTTCGTCCTGCTTGGAGTaGTTGTTCTTCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFSSCLE*LFFMSC
Trigger: GCAGCTCATGAAGAACAAGCACTCCAAGCAGGACGA...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGCTGTCTTCACAATaGCCTCGATGCTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TPINRQRDTALTLITFQPWLSSQ*PRCSQT
Trigger: AGTTTGAGAGCATCGAGGCCATTGTGAAGACAGCCA...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAACACCCTGCGAGGTCTaGACAGCCAAGAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGTPCEV*TAKKSS
Trigger: AGAAGATTTCTTGGCTGTGCAGACCTCGCAGGGTGT...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAAACCACCTGCCCAGGCTaGACAGGGTTAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKTTCPG*TGLMMW
Trigger: CCACATCATTAACCCTGTGCAGCCTGGGCAGGTGGT...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAATTCTTGGAGATGAACTaGGAGGTAACTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: GTPINRQRDTALTLITFQFLEMN*EVTPTS
Trigger: TGAGGTTGGAGTTACCTCCCAGTTCATCTCCAAGAA...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp TCAATCCAAATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTTGAGCGTGGGCAGCTaGCGTGAAGACCACTGCACT +
Preference number: 4 (lower is better)
Translates to: SIQIKLNLLKTSRRNPYDLSVGS*REDHCT
Trigger: AGTGCAGTGGTCTTCACGCCAGCTGCCCACGCTCAA...GTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTATTTGGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298229.7
CDS-3UTR TCA 90 bp TCAATCCAAATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACCCTTCATGGAGCCTCTaGTATTGCCTGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SIQIKLNLLKTSRRNPYDPSWSL*YCLSPR
Trigger: GCGAGGAGACAGGCAATATCAGAGGCTCCATGAAGG...GTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTATTTGGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298229.7
CDS-3UTR CCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAAGTGACTTCCCAATCTTaGTCAGGTCACCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKVTSQS*SGHPGS
Trigger: TGACCCTGGGTGACCTGACCAAGATTGGGAAGTCAC...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAACTCCATCAGGCAGAATaGGATACGTGTGCACATGCT +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKLHQAE*DTCAHA
Trigger: AGCATGTGCACACGTATCGCATTCTGCCTGATGGAG...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR GCA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTTTTGCTCTTTGCTCCTaGCTCATCCTTATCAATGCT +
Preference number: 4 (lower is better)
Translates to: IGTPINRQRDTALTLITFFALCS*LILINA
Trigger: AGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAA...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGATTCTTGGAGATGAACTaGGAGGTAACTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGFLEMN*EVTPTS
Trigger: TGAGGTTGGAGTTACCTCCCAGTTCATCTCCAAGAA...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CCA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAATGGCTGTCTTCACAATaGCCTCGATGCTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKWLSSQ*PRCSQT
Trigger: AGTTTGAGAGCATCGAGGCCATTGTGAAGACAGCCA...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS GCA 90 bp AGCACTCCGCCGCGCAGGCCGCCTCGTTCACCGCGCAGCCGCCGCTaGCTGCAGCGCCGGCCTCAACCCGCCCCGCGCCTCGGTCCCGGA +
Preference number: 5 (lower is better)
Translates to: STPPRRPPRSPRSRR*LQRRPQPAPRLGPG
Trigger: TCCGGGACCGAGGCGCGGGGCGGGTTGAGGCCGGCGCTGCAGGCAGCGGCGGCTGCGCGGTGAACGAGGCGGCCTGCGCGGCGGAGTGCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540973.1
CDS GCA 90 bp CCTCCTCATAGCGCTCCAAGCCGATGGCCCGCAGCCAGGCACTCATaGCTGCCTCGCCCAGCCCGCTGGCCCGCCCGCCCTGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: PPHSAPSRWPAARHS*LPRPARWPARPAGT
Trigger: CGTGCCTGCAGGGCGGGCGGGCCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCTATGAGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp GCAGGGCGCACACAAGGCCCTGGTTGGGCTGGGCGTACAGGCCGATaGGCTCACCCAGGGTCTGGAAGCGGCGCACAGGCACACCCTGCG +
Preference number: 5 (lower is better)
Translates to: AGRTQGPGWAGRTGR*AHPGSGSGAQAHPA
Trigger: CGCAGGGTGTGCCTGTGCGCCGCTTCCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGTGCGCCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541544.1
ENST00000541756.5
CDS CCA 90 bp ATGAGCTGGCGGATGCGGTCGTGCGTGAAGGTGGTCCAGTCCTCCTaGGAGTCCCGCTGTCTCCGCAGCAGCACCAGCCGCCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: MSWRMRSCVKVVQSS*ESRCLRSSTSRPPS
Trigger: GGAGGGTGGGCGGCTGGTGCTGCTGCGGAGACAGCGGGACTCCCAGGAGGACTGGACCACCTTCACGCACGACCGCATCCGCCAGCTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 90 bp CCCAGCCATTATGCACCAGGCCCTCCTCATAGCGCTCCAAGCCGATaGCCCGCAGCCAGGCACTCATGCCTGCCTCGCCCAGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PSHYAPGPPHSAPSR*PAARHSCLPRPARW
Trigger: CCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCTATGAGGAGGGCCTGGTGCATAATGGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp CCAAGGGACAGGGGCAGGGAGGGGACCTGCACACTGGGAAGTACCTaGGGCATCCCGGTCATCCGGTGGGTCCGGCTCTCGCTCACCCTC +
Preference number: 5 (lower is better)
Translates to: PRDRGREGTCTLGST*GIPVIRWVRLSLTL
Trigger: GAGGGTGAGCGAGAGCCGGACCCACCGGATGACCGGGATGCCTCAGGTACTTCCCAGTGTGCAGGTCCCCTCCCTGCCCCTGTCCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541544.1
CDS CCA 90 bp CCCTGGTTGGGCTGGGCGTACAGGCCGATGAGCTCACCCAGGGTCTaGAAGCGGCGCACAGGCACACCCTGCGAGGTCTGCACAGCCAAG +
Preference number: 5 (lower is better)
Translates to: PWLGWAYRPMSSPRV*KRRTGTPCEVCTAK
Trigger: CTTGGCTGTGCAGACCTCGCAGGGTGTGCCTGTGCGCCGCTTCCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCCAGCCCAACCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541544.1
ENST00000541756.5
CDS CCA 90 bp TCACTGTGCAGCCTCCGGCATGAGGTAGCGAGGGTACGGGTGAGGTaGGGCAGGTGGCTGGCTCCACCCCTCACAGCTTCCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLCSLRHEVARVRVR*GRWLAPPLTASRSS
Trigger: GCTGGACCTGGAAGCTGTGAGGGGTGGAGCCAGCCACCTGCCCCACCTCACCCGTACCCTCGCTACCTCATGCCGGAGGCTGCACAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 90 bp AGCGTGCAGGCCCAGCAGGGGCATAGTCCACCTCGCTCAGCGTCTTaGCCATCTGCAGCACCGAGCAGGACCGGTCATCCCCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: SVQAQQGHSPPRSAS*PSAAPSRTGHPHWP
Trigger: TGGCCAGTGGGGATGACCGGTCCTGCTCGGTGCTGCAGATGGCCAAGACGCTGAGCGAGGTGGACTATGCCCCTGCTGGGCCTGCACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CAA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAACGCCCACAGCCCCCTaGTTCCCCAGGGTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPTPTAP*FPRVLA
Trigger: CGCCAACACCCTGGGGAACAAGGGGGCTGTGGGCGT...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCACGCCCACAGCCCCCTaGTTCCCCAGGGTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPTPTAP*FPRVLA
Trigger: CGCCAACACCCTGGGGAACAAGGGGGCTGTGGGCGT...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGTGCCCAGGAGGCTGCTaGCAAGACCCTGTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPCPGGC*QDPVPG
Trigger: GCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCA...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAACACACAAGGCCCTGGTaGGGCTGGGCGTACAGGCCG +
Preference number: 5 (lower is better)
Translates to: GAPPLWFRPGGRPQKLVKHTRPW*GWAYRP
Trigger: CGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGTG...TTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCAGATCCGTAAGCTCCTaGAGGCCCCCGCGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGARSVSS*RPPRSR
Trigger: CCTACTGCGCGGGGGCCTCAAGGAGCTTACGGATCT...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS CCA 90 bp TCTCGCTCACCCTCTACAGGAAGAAGCAGGGCGCACACAAGGCCCTaGTTGGGCTGGGCGTACAGGCCGATGAGCTCACCCAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SRSPSTGRSRAHTRP*LGWAYRPMSSPRVW
Trigger: CCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGTGCGCCCTGCTTCTTCCTGTAGAGGGTGAGCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541544.1
CDS-3UTR CAA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCGAGATGTCAAAGGCATaGAGCTGCCGGTCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PRRLLARPCPGLRPARNLEMSKA*SCRSPS
Trigger: GCTGGGCGACCGGCAGCTCAATGCCTTTGACATCTC...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCTTCTCCCGCTCCAGGTaGAGCTGGTCCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPFSRSR*SWSTLR
Trigger: CCTCAGGGTGGACCAGCTCAACCTGGAGCGGGAGAA...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCTGGTCCGGACCCCAGTaGGCTTCTGCTTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPWSGPQ*ASACAR
Trigger: CCTGGCACAAGCAGAAGCCAACTGGGGTCCGGACCA...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGCACCATGAGGGCACATaGGTCCGGACCCCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: SRRNPYDCPGGCLQDPVPHHEGT*VRTPVG
Trigger: GCCAACTGGGGTCCGGACCAATGTGCCCTCATGGTG...CGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACACCATGAGGGCACATaGGTCCGGACCCCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKHHEGT*VRTPVG
Trigger: GCCAACTGGGGTCCGGACCAATGTGCCCTCATGGTG...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTATCTGTGAAGGCTGGCTaGCGGCTCCCTGACCTGGGC +
Preference number: 5 (lower is better)
Translates to: VQARWKAAETGESGGPDVSVKAG*RLPDLG
Trigger: GCCCAGGTCAGGGAGCCGCAAGCCAGCCTTCACAGA...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCCCCAGCTGTGACTTCCCAATCTaGGTCAGGTCACCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RSSGYSFISGRTPAPTPSCDFPI*VRSPRV
Trigger: GACCCTGGGTGACCTGACCAAGATTGGGAAGTCACA...GCTGGGGGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCGTGGGCAGCTGGCAACTCGATGAAGAACTaGGTGCGGCTGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TTAQEAACKTLSRAWAAGNSMKN*VRLAVF
Trigger: GAAGACAGCCAGCCGCACCAAGTTCTTCATCGAGTT...GCCAGCTGCCCACGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR CAA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCGAAGGTCAGGAACTGTaGGGCCGTGCTGCCGATCAT +
Preference number: 5 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAEGQEL*GRAADH
Trigger: ATGATCGGCAGCACGGCCCAACAGTTCCTGACCTTC...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATTCTGTGAAGGCTGGCTaGCGGCTCCCTGACCTGGGC +
Preference number: 5 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYSVKAG*RLPDLG
Trigger: GCCCAGGTCAGGGAGCCGCAAGCCAGCCTTCACAGA...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGTGCCTCCGCTATCACTaGCTGAGCTGCAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLCLRYH*LSCRVS
Trigger: GGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCA...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CAA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCCAACAGGGAGCTCTTTaGTGGCCTCCACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTQQGAL*WPPQLS
Trigger: AGACAGCTGTGGAGGCCACAAAAGAGCTCCCTGTTG...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp TCTCTGGTTCTTCAAATAACCTGGAGAGCGGGCAGGAGGCCTCTGTaGAGGCTGGCTTGCGGCTCCCTGACCTGGGCTCCTGGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SLVLQITWRAGRRPL*RLACGSLTWAPGSL
Trigger: GAGGGAGCCAGGAGCCCAGGTCAGGGAGCCGCAAGCCAGCCTTCACAGAGGCCTCCTGCCCGCTCTCCAGGTTATTTGAAGAACCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
ENST00000545355.5
CDS TCA 90 bp AGGTGGAAAGTCTGGAGGGGGCAGTGTGCCTCCAGACTCCTCATCTaGAGAACTCCCCTCTCCCACACGAGGGTGCCGGTGGTGCCCAAG +
Preference number: 5 (lower is better)
Translates to: RWKVWRGQCASRLLI*RTPLSHTRVPVVPK
Trigger: CTTGGGCACCACCGGCACCCTCGTGTGGGAGAGGGGAGTTCTTCAGATGAGGAGTCTGGAGGCACACTGCCCCCTCCAGACTTTCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CCA 90 bp GGGGTCTCTGGAGACAGGCCTGCGGGAGGGTCATGGGCTAGGGTATaGGAGCGGGAACAGGCCTCAGGTGAATGGGATGGGTGTAAAGAG +
Preference number: 5 (lower is better)
Translates to: GVSGDRPAGGSWARV*EREQASGEWDGCKE
Trigger: CTCTTTACACCCATCCCATTCACCTGAGGCCTGTTCCCGCTCCCATACCCTAGCCCATGACCCTCCCGCAGGCCTGTCTCCAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537755.1
ENST00000541303.5
CDS CCA 90 bp CCTGTAGGGCCTTCAGGGCCTGCTGCTGCAAAAGGCGGGTCACCATaGGCGAGCTCTGCTGGTCAAACACCTTGGACAGGATCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: PVGPSGPAAAKGGSP*ASSAGQTPWTGSPG
Trigger: GCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGGCCCTGAAGGCCCTACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540329.5
CDS-3UTR CAA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCTTCTCGTGCTCTGGCTaGACCAGCACTGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPFSCSG*TSTATL
Trigger: CAAGGTGGCAGTGCTGGTCAAGCCAGAGCACGAGAA...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCAATCGAAGGAAGACCTaGTGCTTCTCCCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PRRLLARPCPGLRPARNLNRRKT*CFSRSR
Trigger: CCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCGATT...GAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTTGGTCCGGACCCCAGTaGGCTTCTGCTTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSAVVQARWKAAETGESWSGPQ*ASACAR
Trigger: CCTGGCACAAGCAGAAGCCAACTGGGGTCCGGACCA...ACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGCACCATGAGGGCACATaGGTCCGGACCCCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: WCLRYHLLSCRVSRRRRLHHEGT*VRTPVG
Trigger: GCCAACTGGGGTCCGGACCAATGTGCCCTCATGGTG...CAAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCTGGGGGCCTCCCCGTaGGTGGCGGTTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPLGASP*VAVSLV
Trigger: AACCAGAGAAACCGCCACCAACGGGGAGGCCCCCAG...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCATGGCCACTTTGTTCTaGGTGGCAGATGGGACAGGG +
Preference number: 5 (lower is better)
Translates to: RLLARPCPGLRPARNLPPMATLF*VADGTG
Trigger: CCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCAT...GGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCATGGCCACTTTGTTCTaGGTGGCAGATGGGACAGGG +
Preference number: 5 (lower is better)
Translates to: PLWFRPGGRPQKLVKVGAMATLF*VADGTG
Trigger: CCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCAT...GGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp GGCCGGTCCACTTCCACCCTCCTGGTGTTGCCTATTGGGCAGGAATaGCCAGAACACCCCCGTCTCCCCACCAGACCTACACAGACTCCA +
Preference number: 5 (lower is better)
Translates to: GRSTSTLLVLPIGQE*PEHPRLPTRPTQTP
Trigger: TGGAGTCTGTGTAGGTCTGGTGGGGAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGGAAGTGGACCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS GCA 90 bp GGCAGGTTCTGCTGCTGCAAAAGGCGGGTCACCATGGGCGAGCTCTaGTGGTCAAACACCTTGGACAGGATCTCCAGGCCTGACAGGACC +
Preference number: 5 (lower is better)
Translates to: GRFCCCKRRVTMGEL*WSNTLDRISRPDRT
Trigger: GGTCCTGTCAGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGAACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000541756.5
CDS GCA 90 bp CCTCCAGACTCCTCATCTGAAGAACTCCCCTCTCCCACACGAGGGTaGCGGTGGTGCCCAAGCTGTGGAGCAGGCACTGTAATGGCCACT +
Preference number: 5 (lower is better)
Translates to: PPDSSSEELPSPTRG*RWCPSCGAGTVMAT
Trigger: AGTGGCCATTACAGTGCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGAGGGGAGTTCTTCAGATGAGGAGTCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS GCA 90 bp CTGAGTCCGGCAGTGGTGGAGGTGGAAAGTCTGGAGGGGGCAGTGTaGCTCCAGACTCCTCATCTGAAGAACTCCCCTCTCCCACACGAG +
Preference number: 5 (lower is better)
Translates to: LSPAVVEVESLEGAV*LQTPHLKNSPLPHE
Trigger: CTCGTGTGGGAGAGGGGAGTTCTTCAGATGAGGAGTCTGGAGGCACACTGCCCCCTCCAGACTTTCCACCTCCACCACTGCCGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS GCA 90 bp TTCAGGGCCTGCTGCTGCAAAAGGCGGGTCACCATGGGCGAGCTCTaGTGGTCAAACACCTTGGACAGGATCTCCAGGCCTGACAGGACC +
Preference number: 5 (lower is better)
Translates to: FRACCCKRRVTMGEL*WSNTLDRISRPDRT
Trigger: GGTCCTGTCAGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGGCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540329.5
CDS CCA 90 bp CCCCTGTCTGTGGCAGGTTCTGCTGCTGCAAAAGGCGGGTCACCATaGGCGAGCTCTGCTGGTCAAACACCTTGGACAGGATCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: PLSVAGSAAAKGGSP*ASSAGQTPWTGSPG
Trigger: GCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGAACCTGCCACAGACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000541756.5
CDS CCA 90 bp TGGTCTTGGCCTTACGTGTGGATGGCTGCGGAGCTGGGGGTGCTGTaGAGCTCATGTCCTGTAGGGCCTTCAGGGCCTTCTTCTGGATGC +
Preference number: 5 (lower is better)
Translates to: WSWPYVWMAAELGVL*SSCPVGPSGPSSGC
Trigger: GCATCCAGAAGAAGGCCCTGAAGGCCCTACAGGACATGAGCTCCACAGCACCCCCAGCTCCGCAGCCATCCACACGTAAGGCCAAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS CCA 90 bp GGGTCATGGGCTAGGGTATGGGAGCGGGAACAGGCCTCAGGTGAATaGGATGGGTGTAAAGAGACCATGGGAAAGGCGCCCCCTCACCGA +
Preference number: 5 (lower is better)
Translates to: GSWARVWEREQASGE*DGCKETMGKAPPHR
Trigger: TCGGTGAGGGGGCGCCTTTCCCATGGTCTCTTTACACCCATCCCATTCACCTGAGGCCTGTTCCCGCTCCCATACCCTAGCCCATGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537755.1
ENST00000541303.5
CDS CCA 90 bp AGGGCCTGCTGCTGCAAAAGGCGGGTCACCATGGGCGAGCTCTGCTaGTCAAACACCTTGGACAGGATCTCCAGGCCTGACAGGACCTTG +
Preference number: 5 (lower is better)
Translates to: RACCCKRRVTMGELC*SNTLDRISRPDRTL
Trigger: CAAGGTCCTGTCAGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540329.5
CDS CCA 90 bp TGGTCTTGGCCTTACGTGTGGATGGCTGCGGAGCTGGGGGTGCTGTaGAGCTCATGTCCTGTAGGGCCTTCAGGGCCTGCTGCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: WSWPYVWMAAELGVL*SSCPVGPSGPAAAK
Trigger: TTTTGCAGCAGCAGGCCCTGAAGGCCCTACAGGACATGAGCTCCACAGCACCCCCAGCTCCGCAGCCATCCACACGTAAGGCCAAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540329.5
CDS-3UTR CAA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGAACACAACACCCAGCTaGTTCTGGACACGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLNTTPS*FWTRWD
Trigger: GTCCCAGCGTGTCCAGAACAAGCTGGGTGTTGTGTT...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCCCACCACCAGCACTGCCACCTaGATATTCCACAGTGATTGC +
Preference number: 5 (lower is better)
Translates to: ACKTLSRAETCEEPPSPTTSTAT*IFHSDC
Trigger: GCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGT...GGTGGGGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGGAGATGTCAAAGGCATaGAGCTGCCGGTCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: FVVPPLSLAELQGVQKEAEMSKA*SCRSPS
Trigger: GCTGGGCGACCGGCAGCTCAATGCCTTTGACATCTC...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp AAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTTTCTCCCGCTCCAGGTaGAGCTGGTCCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: KTSRRNPYDCPGGCLQDPFSRSR*SWSTLR
Trigger: CCTCAGGGTGGACCAGCTCAACCTGGAGCGGGAGAA...AGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTAGACACAGAGGGGGCTTaGCTCTTTGCTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: VQARWKAAETGESGGPDVDTEGA*LFAPAS
Trigger: TGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTC...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGTGCCTCCGCTATCACTaGCTGAGCTGCAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: FVVPPLSLAELQGVQKEACLRYH*LSCRVS
Trigger: GGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCA...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CAA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCAACAGGGAGCTCTTTaGTGGCCTCCACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPQQGAL*WPPQLS
Trigger: AGACAGCTGTGGAGGCCACAAAAGAGCTCCCTGTTG...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCTCCTGGTGTTGCCTATaGGGCAGGAATGACCAGAAC +
Preference number: 5 (lower is better)
Translates to: QARWKAAETGESGGPDVPSWCCL*GRNDQN
Trigger: GTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGA...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS GCA 90 bp CCTGGGCTCCTGGCTCCCTCGGGACACAGAGGGGGCTTTGCTCTTTaGTCCTGCCTCATCCTTATCAATGCTGATCCACTCGTAGAGCCG +
Preference number: 5 (lower is better)
Translates to: PGLLAPSGHRGGFAL*SCLILINADPLVEP
Trigger: CGGCTCTACGAGTGGATCAGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTCCCGAGGGAGCCAGGAGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 90 bp AGAACTCCCCTCTCCCACACGAGGGTGCCGGTGGTGCCCAAGCTGTaGAGCAGGCACTGTAATGGCCACTTTGTTCTTGGTGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: RTPLSHTRVPVVPKL*SRHCNGHFVLGGRW
Trigger: CCATCTGCCACCAAGAACAAAGTGGCCATTACAGTGCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGAGGGGAGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CCA 90 bp AGCGGGAACAGGCCTCAGGTGAATGGGATGGGTGTAAAGAGACCATaGGAAAGGCGCCCCCTCACCGAGCCGTCTTCTCATTTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: SGNRPQVNGMGVKRP*ERRPLTEPSSHFPR
Trigger: CCTCGGGAAATGAGAAGACGGCTCGGTGAGGGGGCGCCTTTCCCATGGTCTCTTTACACCCATCCCATTCACCTGAGGCCTGTTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537755.1
ENST00000541303.5
ENST00000544806.1
CDS-3UTR CAA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGCACACAAGGCCCTGGTaGGGCTGGGCGTACAGGCCG +
Preference number: 5 (lower is better)
Translates to: QRDTALTLITFQPWGHSWHTRPW*GWAYRP
Trigger: CGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGTG...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCAGGATGTCACGTTTTTaGGAGGTGGTACACTTCCCA +
Preference number: 5 (lower is better)
Translates to: PARSSGYSFISGRTPAPTRMSRF*EVVHFP
Trigger: TGGGAAGTGTACCACCTCCAAAAAACGTGACATCCT...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGAGATCCGTAAGCTCCTaGAGGCCCCCGCGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: PSVLSLKGEGQDALIRALRSVSS*RPPRSR
Trigger: CCTACTGCGCGGGGGCCTCAAGGAGCTTACGGATCT...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTTTCTCGTGCTCTGGCTaGACCAGCACTGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: VVPPLSLAELQGVQKEALFSCSG*TSTATL
Trigger: CAAGGTGGCAGTGCTGGTCAAGCCAGAGCACGAGAA...AAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp AATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGGAGATGTCAAAGGCATaGAGCTGCCGGTCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: NKPQPGPRAIPSFPDGHPEMSKA*SCRSPS
Trigger: GCTGGGCGACCGGCAGCTCAATGCCTTTGACATCTC...CGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGAAATCGAAGGAAGACCTaGTGCTTCTCCCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRNRRKT*CFSRSR
Trigger: CCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCGATT...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTTCAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCAGTTGGCTTCTGCTaGTGCCAGGCATATGTGTCC +
Preference number: 5 (lower is better)
Translates to: VQARWKAAETGESGGPDVPVGFC*CQAYVS
Trigger: GGACACATATGCCTGGCACAAGCAGAAGCCAACTGG...TACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAACTCGATGAAGAACTaGGTGCGGCTGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: RPGGRPQKLVKVGAQTYPNSMKN*VRLAVF
Trigger: GAAGACAGCCAGCCGCACCAAGTTCTTCATCGAGTT...TGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCCCACCTTGAGGAAGTTGATGTaGTCACTGCTCTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: PARSSGYSFISGRTPAPTLRKLM*SLLWAS
Trigger: TGATGCCCAGAGCAGTGACAACATCAACTTCCTCAA...GGTGGGGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTTCAGCCAGAATTGGTTaGAGCGTGGGCAGCTGGCGT +
Preference number: 5 (lower is better)
Translates to: DITPQPLRLPRRLLARPCSARIG*SVGSWR
Trigger: ACGCCAGCTGCCCACGCTCAAACCAATTCTGGCTGA...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATTCAGCCAGAATTGGTTaGAGCGTGGGCAGCTGGCGT +
Preference number: 5 (lower is better)
Translates to: PGGRPQKLVKVGAQTYPNSARIG*SVGSWR
Trigger: ACGCCAGCTGCCCACGCTCAAACCAATTCTGGCTGA...ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTTCAGCCAGAATTGGTTaGAGCGTGGGCAGCTGGCGT +
Preference number: 5 (lower is better)
Translates to: VVPPLSLAELQGVQKEALSARIG*SVGSWR
Trigger: ACGCCAGCTGCCCACGCTCAAACCAATTCTGGCTGA...AAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTGACACAGAGGGGGCTTaGCTCTTTGCTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPDTEGA*LFAPAS
Trigger: TGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTC...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGCTTGACACAGAGGGGGCTTaGCTCTTTGCTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: VVPPLSLAELQGVQKEALDTEGA*LFAPAS
Trigger: TGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTC...AAGCGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTCTGGGGGCCTCCCCGTaGGTGGCGGTTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTLGASP*VAVSLV
Trigger: AACCAGAGAAACCGCCACCAACGGGGAGGCCCCCAG...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAGGCCCGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCACTGTAATGGCCACTTaGTTCTTGGTGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: QARWKAAETGESGGPDVPTVMAT*FLVADG
Trigger: CCCATCTGCCACCAAGAACAAAGTGGCCATTACAGT...GGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGTGCCCAGGAGGCTGCTaGCAAGACCCTGTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: QRDTALTLITFQPWGHSWCPGGC*QDPVPG
Trigger: GCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCA...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAATGCCCAGGAGGCTGCTaGCAAGACCCTGTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQCPGGC*QDPVPG
Trigger: GCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCA...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS GCA 90 bp CTCCTGGCTCCCTCGGGACACAGAGGGGGCTTTGCTCTTTGCTCCTaGCTCATCCTTATCAATGCTGATCCACTCGTAGAGCCGCTCACG +
Preference number: 5 (lower is better)
Translates to: LLAPSGHRGGFALCS*LILINADPLVEPLT
Trigger: CGTGAGCGGCTCTACGAGTGGATCAGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTCCCGAGGGAGCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 90 bp CCAGGTCCAGCCCATAGCTGCCTTTCAGGTAGTCGTGCGAGACGGTaGTCAGCCCATTGGGAGCACTTTGGGGAGGGGTTAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: PGPAHSCLSGSRARR*SAHWEHFGEGLRSQ
Trigger: CTGACTTCTTAACCCCTCCCCAAAGTGCTCCCAATGGGCTGAGCACCGTCTCGCACGACTACCTGAAAGGCAGCTATGGGCTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537656.1
CDS CCA 90 bp GCAAAAGGCGGGTCACCATGGGCGAGCTCTGCTGGTCAAACACCTTaGACAGGATCTCCAGGCCTGACAGGACCTTGTCCACCTCACTGT +
Preference number: 5 (lower is better)
Translates to: AKGGSPWASSAGQTP*TGSPGLTGPCPPHC
Trigger: ACAGTGAGGTGGACAAGGTCCTGTCAGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 90 bp AGGTTCTGCTGCTGCAAAAGGCGGGTCACCATGGGCGAGCTCTGCTaGTCAAACACCTTGGACAGGATCTCCAGGCCTGACAGGACCTTG +
Preference number: 5 (lower is better)
Translates to: RFCCCKRRVTMGELC*SNTLDRISRPDRTL
Trigger: CAAGGTCCTGTCAGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000541756.5
CDS CCA 90 bp CGCACCTTCATGGAGCCTCTGATATTGCCTGTCTCCTCGCCACGGTaGGATAGGAAGGTCAGGAACTGTTGGGCCGTGCTGCCGATCATG +
Preference number: 5 (lower is better)
Translates to: RTFMEPLILPVSSPR*DRKVRNCWAVLPIM
Trigger: CATGATCGGCAGCACGGCCCAACAGTTCCTGACCTTCCTATCCCACCGTGGCGAGGAGACAGGCAATATCAGAGGCTCCATGAAGGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 90 bp AGGCTGCACAGGGTTAATGATGTGGCCGGTCCACTTCCACCCTCCTaGTGTTGCCTATTGGGCAGGAATGACCAGAACACCCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: RLHRVNDVAGPLPPS*CCLLGRNDQNTPVS
Trigger: GGAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGGAAGTGGACCGGCCACATCATTAACCCTGTGCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CGGTGGAAGGCCGCAGAAACTGGTGAAAGTGGGGGCCCAGACGTACCCAAATGGAACACAACACCCAGCTaGTTCTGGACACGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RWKAAETGESGGPDVPKWNTTPS*FWTRWD
Trigger: GTCCCAGCGTGTCCAGAACAAGCTGGGTGTTGTGTT...CCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGGCCTTCCACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATAACACAACACCCAGCTaGTTCTGGACACGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYNTTPS*FWTRWD
Trigger: GTCCCAGCGTGTCCAGAACAAGCTGGGTGTTGTGTT...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAATCCTGCTTGGAGTGCTaGTTCTTCATGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKSCLEC*FFMSCN
Trigger: GTTGCAGCTCATGAAGAACAAGCACTCCAAGCAGGA...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCAGATCCGTAAGCTCCTaGAGGCCCCCGCGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: RDTALTLITFQPWGHSWARSVSS*RPPRSR
Trigger: CCTACTGCGCGGGGGCCTCAAGGAGCTTACGGATCT...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCGATGTCCAAGTAGTTTaGGTTCCTCCGAGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: KPQPGPRAIPSFPDGHPPDVQVV*VPPSRL
Trigger: AAGACGGCTCGGAGGAACCAAAACTACTTGGACATC...GGGCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTCTCCCGCTCCAGGTaGAGCTGGTCCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTFSRSR*SWSTLR
Trigger: CCTCAGGGTGGACCAGCTCAACCTGGAGCGGGAGAA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GCCTTGGTAGCAGGGAGGGGCTCTGAGTTCACAGCTTCGTGGTGCCTCCGCTATAATCGAAGGAAGACCTaGTGCTTCTCCCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ALVAGRGSEFTASWCLRYNRRKT*CFSRSR
Trigger: CCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCGATT...ATAGCGGAGGCACCACGAAGCTGTGAACTCAGAGCCCCTCCCTGCTACCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp ATAAACCCCAGCCCGGTCCTCGGGCTATTCCTTCATTTCCGGACGGACACCCGCCCAGTTGGCTTCTGCTaGTGCCAGGCATATGTGTCC +
Preference number: 5 (lower is better)
Translates to: INPSPVLGLFLHFRTDTRPVGFC*CQAYVS
Trigger: GGACACATATGCCTGGCACAAGCAGAAGCCAACTGG...GCGGGTGTCCGTCCGGAAATGAAGGAATAGCCCGAGGACCGGGCTGGGGTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTGGTCCGGACCCCAGTaGGCTTCTGCTTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTWSGPQ*ASACAR
Trigger: CCTGGCACAAGCAGAAGCCAACTGGGGTCCGGACCA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGACCTGCGAGGAACCTCCCTCCCTGCACTTTGAGGAAGTaGATGTTGTCACTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RLLARPCPGLRPARNLPPCTLRK*MLSLLW
Trigger: CCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCA...GGGAGGGAGGTTCCTCGCAGGTCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTCGTGGTGCCTCCGCTATCACTTGCTGAGCTGCAGGGTGTCCAGAAGGAGGCGATGGCCACTTTGTTCTaGGTGGCAGATGGGACAGGG +
Preference number: 5 (lower is better)
Translates to: FVVPPLSLAELQGVQKEAMATLF*VADGTG
Trigger: CCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCAT...CGCCTCCTTCTGGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCACCACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CAA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGTGCCTCCGCTATCACTaGCTGAGCTGCAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PSVLSLKGEGQDALIRALCLRYH*LSCRVS
Trigger: GGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCA...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: QRDTALTLITFQPWGHSWGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS TCA 90 bp CTCCATCAGGCAGAATGCGATACGTGTGCACATGCTTCTGATACCTaGTGCCAAGGCAGGGCCAGAATCTGTCACCCCCAGGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: LHQAECDTCAHASDT*CQGRARICHPQAGV
Trigger: GACCCCAGCCTGGGGGTGACAGATTCTGGCCCTGCCTTGGCATCAGGTATCAGAAGCATGTGCACACGTATCGCATTCTGCCTGATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS GCA 90 bp TCCTCATCTGAAGAACTCCCCTCTCCCACACGAGGGTGCCGGTGGTaGCCAAGCTGTGGAGCAGGCACTGTAATGGCCACTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SSSEELPSPTRGCRW*PSCGAGTVMATLFL
Trigger: CAAGAACAAAGTGGCCATTACAGTGCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGAGGGGAGTTCTTCAGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CCA 90 bp TTGCCTGTCTCCTCGCCACGGTGGGATAGGAAGGTCAGGAACTGTTaGGCCGTGCTGCCGATCATGGATTTGAGTGCAACCACACACTCC +
Preference number: 5 (lower is better)
Translates to: LPVSSPRWDRKVRNC*AVLPIMDLSATTHS
Trigger: GGAGTGTGTGGTTGCACTCAAATCCATGATCGGCAGCACGGCCCAACAGTTCCTGACCTTCCTATCCCACCGTGGCGAGGAGACAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 90 bp TTAATGATGTGGCCGGTCCACTTCCACCCTCCTGGTGTTGCCTATTaGGCAGGAATGACCAGAACACCCCCGTCTCCCCACCAGACCTAC +
Preference number: 5 (lower is better)
Translates to: LMMWPVHFHPPGVAY*AGMTRTPPSPHQTY
Trigger: GTAGGTCTGGTGGGGAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGGAAGTGGACCGGCCACATCATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS CCA 90 bp GGTTTCCCTAAAACCACCTGCCCAGGCTGCACAGGGTTAATGATGTaGCCGGTCCACTTCCACCCTCCTGGTGTTGCCTATTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: GFPKTTCPGCTGLMM*PVHFHPPGVAYWAG
Trigger: TCCTGCCCAATAGGCAACACCAGGAGGGTGGAAGTGGACCGGCCACATCATTAACCCTGTGCAGCCTGGGCAGGTGGTTTTAGGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS CCA 90 bp CATAGCTGCCTTTCAGGTAGTCGTGCGAGACGGTGCTCAGCCCATTaGGAGCACTTTGGGGAGGGGTTAAGAAGTCAGTGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: HSCLSGSRARRCSAH*EHFGEGLRSQWRSC
Trigger: GCAGGACCTCCACTGACTTCTTAACCCCTCCCCAAAGTGCTCCCAATGGGCTGAGCACCGTCTCGCACGACTACCTGAAAGGCAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537656.1
CDS-3UTR CAA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCAGGCCTGACAGGACCTaGTCCACCTCACTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RDTALTLITFQPWGHSWARPDRT*STSLCS
Trigger: GCTGCACAGTGAGGTGGACAAGGTCCTGTCAGGCCT...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCCCGGGCTGAGATCCTGCTTGGAGTGCTaGTTCTTCATGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: QPLRLPRRLLARPCPGLRSCLEC*FFMSCN
Trigger: GTTGCAGCTCATGAAGAACAAGCACTCCAAGCAGGA...TCTCAGCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAACTGAGGATGTCACGTTTTTaGGAGGTGGTACACTTCCCA +
Preference number: 5 (lower is better)
Translates to: LSGAPPLWFRPGGRPQKLRMSRF*EVVHFP
Trigger: TGGGAAGTGTACCACCTCCAAAAAACGTGACATCCT...CAGTTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GGTCTTAGCGGAGCTCCTCCGCTGTGGTTCAGGCCCGGTGGAAGGCCGCAGAAATTGAGGAAGTTGATGTaGTCACTGCTCTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: GLSGAPPLWFRPGGRPQKLRKLM*SLLWAS
Trigger: TGATGCCCAGAGCAGTGACAACATCAACTTCCTCAA...TTTCTGCGGCCTTCCACCGGGCCTGAACCACAGCGGAGGAGCTCCGCTAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GACCCTGTCCCGGGCGTGGGCAGCTGGCGTGAAGACCACTGCACTTTGAGGAAGTGCACTTTGAGGAAGTaGATGTTGTCACTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: DPVPGVGSWREDHCTLRKCTLRK*MLSLLW
Trigger: CCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCA...CTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGGGACAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR CAA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTCTGCCGATCATGGATTaGAGTGCAACCACACACTCC +
Preference number: 5 (lower is better)
Translates to: DITPQPLRLPRRLLARPCLPIMD*SATTHS
Trigger: GGAGTGTGTGGTTGCACTCAAATCCATGATCGGCAG...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTGCCTCCGCTATCACTaGCTGAGCTGCAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: RDTALTLITFQPWGHSWACLRYH*LSCRVS
Trigger: GGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS GCA 90 bp AAGTCCTTTAGCACTGACAGCTTCAGCACCAGGCTCTCTAGTTCCTaGTCCCCTGTCTGTGGCAGGTTCTGCTGCTGCAAAAGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: KSFSTDSFSTRLSSS*SPVCGRFCCCKRRV
Trigger: GACCCGCCTTTTGCAGCAGCAGAACCTGCCACAGACAGGGGAGCAGGAACTAGAGAGCCTGGTGCTGAAGCTGTCAGTGCTAAAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGACGGTGCTCAGCCCATaGGGAGCACTCTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VLSLKGEGQDALIRALQMTVLSP*GALSAA
Trigger: AGCTGCTGAGAGTGCTCCCAATGGGCTGAGCACCGT...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGAGGCCTGACAGGACCTaGTCCACCTCACTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: VLSLKGEGQDALIRALQMRPDRT*STSLCS
Trigger: GCTGCACAGTGAGGTGGACAAGGTCCTGTCAGGCCT...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTGATGTCCAAGTAGTTTaGGTTCCTCCGAGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPDVQVV*VPPSRL
Trigger: AAGACGGCTCGGAGGAACCAAAACTACTTGGACATC...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAGAAGGTCAGGAACTGTaGGGCCGTGCTGCCGATCAT +
Preference number: 5 (lower is better)
Translates to: IEDITPQPLRLPRRLLAREGQEL*GRAADH
Trigger: ATGATCGGCAGCACGGCCCAACAGTTCCTGACCTTC...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGATGGCCACTTTGTTCTaGGTGGCAGATGGGACAGGG +
Preference number: 5 (lower is better)
Translates to: PSVLSLKGEGQDALIRALMATLF*VADGTG
Trigger: CCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCAT...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGACCCTGTACTGTAATGGCCACTTaGTTCTTGGTGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: DITPQPLRLPRRLLARPCTVMAT*FLVADG
Trigger: CCCATCTGCCACCAAGAACAAAGTGGCCATTACAGT...ACAGGGTCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCCCAACCCCCTCAGCTaGGTTTCCCTAAAACCACCT +
Preference number: 5 (lower is better)
Translates to: PSVLSLKGEGQDALIRALPNPLS*VSLKPP
Trigger: AGGTGGTTTTAGGGAAACCAAGCTGAGGGGGTTGGG...CAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp AAGGCCTCCCGCTTCCGGGCACTGACAAAGATGAAGTCCTTGCGCTaGGTCCGGTCCTTCTCCTTCTCAAACACAACACCCAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: KASRFRALTKMKSLR*VRSFSFSNTTPSLF
Trigger: GAACAAGCTGGGTGTTGTGTTTGAGAAGGAGAAGGACCGGACTCAGCGCAAGGACTTCATCTTTGTCAGTGCCCGGAAGCGGGAGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS CCA 90 bp TCCTTCTCCTTCTCAAACACAACACCCAGCTTGTTCTGGACACGCTaGGACTTAATGAGCTGGCGGATGCGGTCGTGCGTGAAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: SFSFSNTTPSLFWTR*DLMSWRMRSCVKVV
Trigger: GACCACCTTCACGCACGACCGCATCCGCCAGCTCATTAAGTCCCAGCGTGTCCAGAACAAGCTGGGTGTTGTGTTTGAGAAGGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 90 bp ACCAGCACTGCCACCTTGATATTCCACAGTGATTGCATGGCAATCTaGGTAGAGAGTGCATGGTCACCACTGCCCTGCTGCACCCACTGC +
Preference number: 5 (lower is better)
Translates to: TSTATLIFHSDCMAI*VESAWSPLPCCTHC
Trigger: GCAGTGGGTGCAGCAGGGCAGTGGTGACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS-3UTR CAA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCACACAAGGCCCTGGTaGGGCTGGGCGTACAGGCCG +
Preference number: 5 (lower is better)
Translates to: TPINRQRDTALTLITFQPHTRPW*GWAYRP
Trigger: CGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGTG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTGTGACTTCCCAATCTaGGTCAGGTCACCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTCDFPI*VRSPRV
Trigger: GACCCTGGGTGACCTGACCAAGATTGGGAAGTCACA...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGATTGTTCCCCAGGGTGTaGGCGATGCCAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: IEDITPQPLRLPRRLLARLFPRV*AMPVFT
Trigger: TGTGAAGACTGGCATCGCCAACACCCTGGGGAACAA...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCATGGCAACTGACCTTCCGTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTTTTGAGAGCCCTTTCTaGGAGATGAACTGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: PWQLTFRPEPKRRGAGCPFESPF*EMNWEV
Trigger: TACCTCCCAGTTCATCTCCAAGAAAGGGCTCTCAAA...AGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGACGGAAGGTCAGTTGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCGGGCGTGGGCAGCTGGCGTGAAGACCACTGCACTTTGAGGAAGTTGATGTTGCCTGGTCTGAAGTCTTaGAGAGCCCTTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: PGVGSWREDHCTLRKLMLPGLKS*RALSWR
Trigger: TCTCCAAGAAAGGGCTCTCAAAGACTTCAGACCAGG...CAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR CAA 90 bp GCCTCCTCCAAGTCCTCCTCGGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGACTGTAATGGCCACTTaGTTCTTGGTGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: ASSKSSSVMSLRNSRSSQTVMAT*FLVADG
Trigger: CCCATCTGCCACCAAGAACAAAGTGGCCATTACAGT...CTGGGACGACCTGGAGTTTCTCAGTGACATCACCGAGGAGGACTTGGAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCGGCCATAGCTGGGCCTaGGTAGCAGGGAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: INRQRDTALTLITFQPWGGHSWA*VAGRGS
Trigger: AGAGCCCCTCCCTGCTACCAAGGCCCAGCTATGGCC...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CAA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCCCCAACCCCCTCAGCTaGGTTTCCCTAAAACCACCT +
Preference number: 5 (lower is better)
Translates to: RDTALTLITFQPWGHSWAPNPLS*VSLKPP
Trigger: AGGTGGTTTTAGGGAAACCAAGCTGAGGGGGTTGGG...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp CTTTTGTGTCCATCACAGGGTAGGAAGGCTTGCCACCCCTCTTCCTaGCGGACTGGAGAGAAATGGTTCCTCTCGTGGCATGAAGGACTC +
Preference number: 5 (lower is better)
Translates to: LLCPSQGRKACHPSS*RTGEKWFLSWHEGL
Trigger: GAGTCCTTCATGCCACGAGAGGAACCATTTCTCTCCAGTCCGTCAGGAAGAGGGGTGGCAAGCCTTCCTACCCTGTGATGGACACAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS TCA 90 bp CTCGTGCTCTGGCTTGACCAGCACTGCCACCTTGATATTCCACAGTaGTTGCATGGCAATCTGGGTAGAGAGTGCATGGTCACCACTGCC +
Preference number: 5 (lower is better)
Translates to: LVLWLDQHCHLDIPQ*LHGNLGRECMVTTA
Trigger: GGCAGTGGTGACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCAGAGCACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS GCA 90 bp TGCTCTGGCTTGACCAGCACTGCCACCTTGATATTCCACAGTGATTaGATGGCAATCTGGGTAGAGAGTGCATGGTCACCACTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CSGLTSTATLIFHSD*MAIWVESAWSPLPC
Trigger: GCAGGGCAGTGGTGACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS CCA 90 bp TTGATATTCCACAGTGATTGCATGGCAATCTGGGTAGAGAGTGCATaGTCACCACTGCCCTGCTGCACCCACTGCCTGCATTTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: LIFHSDCMAIWVESA*SPLPCCTHCLHFPL
Trigger: CAGGGGGAAATGCAGGCAGTGGGTGCAGCAGGGCAGTGGTGACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTGGAATATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS-3UTR CAA 90 bp GCCTCCTCCAAGTCCTCCTCGGTGATGTCACTGAGAAACTCCAGGTCGTCCCAGAGGATGTCACGTTTTTaGGAGGTGGTACACTTCCCA +
Preference number: 5 (lower is better)
Translates to: ASSKSSSVMSLRNSRSSQRMSRF*EVVHFP
Trigger: TGGGAAGTGTACCACCTCCAAAAAACGTGACATCCT...CTGGGACGACCTGGAGTTTCTCAGTGACATCACCGAGGAGGACTTGGAGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541756.5
CDS-3UTR CAA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGTTGTTCCCCAGGGTGTaGGCGATGCCAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: QRDTALTLITFQPWGHSWLFPRV*AMPVFT
Trigger: TGTGAAGACTGGCATCGCCAACACCCTGGGGAACAA...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTACGCCCACAGCCCCCTaGTTCCCCAGGGTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: IGTPINRQRDTALTLITFTPTAP*FPRVLA
Trigger: CGCCAACACCCTGGGGAACAAGGGGGCTGTGGGCGT...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGGAAGGTCAGGAACTGTaGGGCCGTGCTGCCGATCAT +
Preference number: 5 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLEGQEL*GRAADH
Trigger: ATGATCGGCAGCACGGCCCAACAGTTCCTGACCTTC...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGATGGAGCCTCTGATATaGCCTGTCTCCTCGCCACGG +
Preference number: 5 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLMEPLI*PVSSPR
Trigger: CCGTGGCGAGGAGACAGGCAATATCAGAGGCTCCAT...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTCTGTGAAGGCTGGCTaGCGGCTCCCTGACCTGGGC +
Preference number: 5 (lower is better)
Translates to: TPINRQRDTALTLITFQPSVKAG*RLPDLG
Trigger: GCCCAGGTCAGGGAGCCGCAAGCCAGCCTTCACAGA...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCCTGGGGGCCTCCCCGTaGGTGGCGGTTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: TPINRQRDTALTLITFQPLGASP*VAVSLV
Trigger: AACCAGAGAAACCGCCACCAACGGGGAGGCCCCCAG...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp AAATCTTCTCCATCAGGCAGAATGCGATACGTGTGCACATGCTTCTaGTACCTGATGCCAAGGCAGGGCCAGAATCTGTCACCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: KSSPSGRMRYVCTCF*YLMPRQGQNLSPPG
Trigger: GCCTGGGGGTGACAGATTCTGGCCCTGCCTTGGCATCAGGTATCAGAAGCATGTGCACACGTATCGCATTCTGCCTGATGGAGAAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS GCA 90 bp CATGGTCACCACTGCCCTGCTGCACCCACTGCCTGCATTTCCCCCTaGACTATAAATAGACTTTTGTGTCCATCACAGGGTAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: HGHHCPAAPTACISP*TINRLLCPSQGRKA
Trigger: AGCCTTCCTACCCTGTGATGGACACAAAAGTCTATTTATAGTGCAGGGGGAAATGCAGGCAGTGGGTGCAGCAGGGCAGTGGTGACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS-3UTR CAA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCAGGCCTGACAGGACCTaGTCCACCTCACTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: INRQRDTALTLITFQPWGRPDRT*STSLCS
Trigger: GCTGCACAGTGAGGTGGACAAGGTCCTGTCAGGCCT...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGATCCTGCTTGGAGTGCTaGTTCTTCATGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: IEDITPQPLRLPRRLLARSCLEC*FFMSCN
Trigger: GTTGCAGCTCATGAAGAACAAGCACTCCAAGCAGGA...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAGAACCAGCACTGCCACCTaGATATTCCACAGTGATTGC +
Preference number: 5 (lower is better)
Translates to: IEDITPQPLRLPRRLLARTSTAT*IFHSDC
Trigger: GCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGT...TCTTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAGAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTCCTGGTCTGAAGTCTTaGAGAGCCCTTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: PEQGSTDQETVRTKQTGTPGLKS*RALSWR
Trigger: TCTCCAAGAAAGGGCTCTCAAAGACTTCAGACCAGG...AGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAAACTCGATGAAGAACTaGGTGCGGCTGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FIEDITPQPLRLPRRLLANSMKN*VRLAVF
Trigger: GAAGACAGCCAGCCGCACCAAGTTCTTCATCGAGTT...TGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTTGAGGAAGTTGATGTTGTCACTGCTCTGGGCATCATTCTCAAAGCTCTTCTTTGCCCAGGAGGCTGCTaGCAAGACCCTGTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: FEEVDVVTALGIILKALLCPGGC*QDPVPG
Trigger: GCCCGGGACAGGGTCTTGCAAGCAGCCTCCTGGGCA...AAGAAGAGCTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS TCA 90 bp AAGGCGCCCCCTCACCGAGCCGTCTTCTCATTTCCCGAGGTGAGGTaGCAATTCACAAAGCCAAATGAGGTGCCATTAAACATGAAGGAG +
Preference number: 5 (lower is better)
Translates to: KAPPHRAVFSFPEVR*QFTKPNEVPLNMKE
Trigger: CTCCTTCATGTTTAATGGCACCTCATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAATGAGAAGACGGCTCGGTGAGGGGGCGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537755.1
ENST00000544806.1
CDS GCA 90 bp CCAGTCTTCACACTGGACGTACTGACATGGCTGATACGGTTCTCGTaGTCTGGCTTGACCAGCACTGCCACCTTGATATTCCACAGTGAT +
Preference number: 5 (lower is better)
Translates to: PVFTLDVLTWLIRFS*SGLTSTATLIFHSD
Trigger: ATCACTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCAGAGCACGAGAACCGTATCAGCCATGTCAGTACGTCCAGTGTGAAGACTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537755.1
ENST00000538751.5
ENST00000541756.5
ENST00000544806.1
CDS-3UTR CAA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTGTGACTTCCCAATCTaGGTCAGGTCACCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSCDFPI*VRSPRV
Trigger: GACCCTGGGTGACCTGACCAAGATTGGGAAGTCACA...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGATGTCCAAGTAGTTTaGGTTCCTCCGAGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: QRDTALTLITFQPWGHSWDVQVV*VPPSRL
Trigger: AAGACGGCTCGGAGGAACCAAAACTACTTGGACATC...CCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GTCCTGAGCCTAAAAGGCGAGGGGCAGGATGCCCTAATTAGGGCATTGCAAATGCCTGGTCTGAAGTCTTaGAGAGCCCTTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: VLSLKGEGQDALIRALQMPGLKS*RALSWR
Trigger: TCTCCAAGAAAGGGCTCTCAAAGACTTCAGACCAGG...CATTTGCAATGCCCTAATTAGGGCATCCTGCCCCTCGCCTTTTAGGCTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCCATAGCTGGGCCTGCACTTTGAGGAAGTaGATGTTGTCACTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RDTALTLITFQPWGHSWACTLRK*MLSLLW
Trigger: CCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCA...GGCCCAGCTATGGCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAATGCCTCCGCTATCACTaGCTGAGCTGCAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GTPINRQRDTALTLITFQCLRYH*LSCRVS
Trigger: GGACACCCTGCAGCTCAGCAAGTGATAGCGGAGGCA...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS TCA 90 bp CTCCCATCACTCTGTCCGGGAGGCTCTGACCATAAGAATTGCAGATaGTGTGAGTTTCAGGGTAGGATTTCCACAGAATCCGGTCACACC +
Preference number: 5 (lower is better)
Translates to: LPSLCPGGSDHKNCR*CEFQGRISTESGHT
Trigger: GGTGTGACCGGATTCTGTGGAAATCCTACCCTGAAACTCACATCATCTGCAATTCTTATGGTCAGAGCCTCCCGGACAGAGTGATGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545355.5
CDS-3UTR CAA 90 bp ATAGGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTACGGTGCTCAGCCCATaGGGAGCACTCTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: IGTPINRQRDTALTLITFTVLSP*GALSAA
Trigger: AGCTGCTGAGAGTGCTCCCAATGGGCTGAGCACCGT...AAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGACCAGCACTGCCACCTaGATATTCCACAGTGATTGC +
Preference number: 5 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLTSTAT*IFHSDC
Trigger: GCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGT...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTTCTCGTGCTCTGGCTaGACCAGCACTGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: TPINRQRDTALTLITFQPFSCSG*TSTATL
Trigger: CAAGGTGGCAGTGCTGGTCAAGCCAGAGCACGAGAA...GGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCCCAGTTGGCTTCTGCTaGTGCCAGGCATATGTGTCC +
Preference number: 5 (lower is better)
Translates to: KLNLLKTSRRNPYDCPGGPVGFC*CQAYVS
Trigger: GGACACATATGCCTGGCACAAGCAGAAGCCAACTGG...GCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp AATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCCTGGTCTGAAGTCTTaGAGAGCCCTTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: NLLKTSRRNPYDCPGGCLPGLKS*RALSWR
Trigger: TCTCCAAGAAAGGGCTCTCAAAGACTTCAGACCAGG...CAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ACCAACCCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTAACTCGATGAAGAACTaGGTGCGGCTGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TNPNNIKVLSLPRPTQNSNSMKN*VRLAVF
Trigger: GAAGACAGCCAGCCGCACCAAGTTCTTCATCGAGTT...ACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTTGCAATTGAGGAAGTTGATGTaGTCACTGCTCTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: LLKTSRRNPYDCPGGCLQLRKLM*SLLWAS
Trigger: TGATGCCCAGAGCAGTGACAACATCAACTTCCTCAA...TTGCAAGCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS TCA 90 bp CGTCTTCTCATTTCCCGAGGTGAGGTGACAATTCACAAAGCCAAATaGGGTGCCATTAAACATGAAGGAGACGCCCACAGCCCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: RLLISRGEVTIHKAK*GAIKHEGDAHSPLV
Trigger: AACAAGGGGGCTGTGGGCGTCTCCTTCATGTTTAATGGCACCTCATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAATGAGAAGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537755.1
ENST00000538751.5
ENST00000541756.5
ENST00000544806.1
CDS-3UTR CAA 90 bp GAGCAGGGCAGCACAGACCAGGAGACAGTGAGAACTAAGCAAACTGGCACTTTATTTGAGAGCCCTTTCTaGGAGATGAACTGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: EQGSTDQETVRTKQTGTLFESPF*EMNWEV
Trigger: TACCTCCCAGTTCATCTCCAAGAAAGGGCTCTCAAA...TAAAGTGCCAGTTTGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAGGCTGCTGCACTTTGAGGAAGTaGATGTTGTCACTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LNLLKTSRRNPYDCPGGCCTLRK*MLSLLW
Trigger: CCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCA...GCAGCCTCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATATGGAGCCTCTGATATaGCCTGTCTCCTCGCCACGG +
Preference number: 5 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNMEPLI*PVSSPR
Trigger: CCGTGGCGAGGAGACAGGCAATATCAGAGGCTCCAT...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGCTGCCGATCATGGATTaGAGTGCAACCACACACTCC +
Preference number: 5 (lower is better)
Translates to: PINRQRDTALTLITFQPWLPIMD*SATTHS
Trigger: GGAGTGTGTGGTTGCACTCAAATCCATGATCGGCAG...CCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGAATGGAGCCTCTGATATaGCCTGTCTCCTCGCCACGG +
Preference number: 5 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGMEPLI*PVSSPR
Trigger: CCGTGGCGAGGAGACAGGCAATATCAGAGGCTCCAT...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGATTGTTCCCCAGGGTGTaGGCGATGCCAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGLFPRV*AMPVFT
Trigger: TGTGAAGACTGGCATCGCCAACACCCTGGGGAACAA...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp ATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAACCCTGGGGCTTTGAGAGCCCTTTCTaGGAGATGAACTGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: INRQRDTALTLITFQPWGFESPF*EMNWEV
Trigger: TACCTCCCAGTTCATCTCCAAGAAAGGGCTCTCAAA...GCCCCAGGGTTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp GGCACCCCAATAAATAGGCAGAGAGATACTGCCCTGACCCTCATAACTTTTCAAACTGTAATGGCCACTTaGTTCTTGGTGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: GTPINRQRDTALTLITFQTVMAT*FLVADG
Trigger: CCCATCTGCCACCAAGAACAAAGTGGCCATTACAGT...TTGAAAAGTTATGAGGGTCAGGGCAGTATCTCTCTGCCTATTTATTGGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS-3UTR CAA 90 bp ATAAAACTTAATTTATTGAAGACATCACGCCGCAACCCTTACGACTGCCCAGGACTGCCGATCATGGATTaGAGTGCAACCACACACTCC +
Preference number: 5 (lower is better)
Translates to: IKLNLLKTSRRNPYDCPGLPIMD*SATTHS
Trigger: GGAGTGTGTGGTTGCACTCAAATCCATGATCGGCAG...TCCTGGGCAGTCGTAAGGGTTGCGGCGTGATGTCTTCAATAAATTAAGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp CCCAATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATTTGAGGAAGTTGATGTaGTCACTGCTCTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: PNNIKVLSLPRPTQNSLNLRKLM*SLLWAS
Trigger: TGATGCCCAGAGCAGTGACAACATCAACTTCCTCAA...ATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS-3UTR CAA 90 bp TTTGAGGAAGTTGATGTTGTCACTGCTCTGGGCATCATTCTCAAAGCTCTTCTTTTTGAGAGCCCTTTCTaGGAGATGAACTGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: FEEVDVVTALGIILKALLFESPF*EMNWEV
Trigger: TACCTCCCAGTTCATCTCCAAGAAAGGGCTCTCAAA...AAGAAGAGCTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535985.1
CDS-3UTR CAA 90 bp AATAATATTAAGGTGCTCTCCCTCCCCAGACCCACACAGAACAGTTTAAATAAATCCTGGTGTTGCCTATaGGGCAGGAATGACCAGAAC +
Preference number: 5 (lower is better)
Translates to: NNIKVLSLPRPTQNSLNKSWCCL*GRNDQN
Trigger: GTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGA...TTTATTTAAACTGTTCTGTGTGGGTCTGGGGAGGGAGAGCACCTTAATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS GCA 72 bp CCGCGCAGGCCGCCTCGTTCACCGCGCAGCCGCCGCTaGCTGCAGCGCCGGCCTCAACTCCCGGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: PRRPPRSPRSRR*LQRRPQLPGCS
Trigger: GGAGCAGCCCGGGAGTTGAGGCCGGCGCTGCAGGCAGCGGCGGCTGCGCGGTGAACGAGGCGGCCTGCGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543234.1
CDS CCA 72 bp CCGCCCCGCGCCTCGGTCCCGGAGCCGCTGGCCCACTaGGTGACCTCGGGCAAGTCGCGGCGCGGGGTTGAG +
Preference number: 6 (lower is better)
Translates to: PPRASVPEPLAH*VTSGKSRRGVE
Trigger: CTCAACCCCGCGCCGCGACTTGCCCGAGGTCACCCAGTGGGCCAGCGGCTCCGGGACCGAGGCGCGGGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540973.1
CDS TCA 72 bp CCCGCGCCTCGGTCCCGGAGCCGCTGGCCCACTGGGTaGCCTCGGGCAAGTCGCGGCGCGGGGTTGAGCGTC +
Preference number: 6 (lower is better)
Translates to: PAPRSRSRWPTG*PRASRGAGLSV
Trigger: GACGCTCAACCCCGCGCCGCGACTTGCCCGAGGTCACCCAGTGGGCCAGCGGCTCCGGGACCGAGGCGCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540973.1
CDS GCA 72 bp CTCCAAGCCGATGGCCCGCAGCCAGGCACTCATGCCTaGCTCGCCCAGCCCGCTGGCCCGCCCGCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LQADGPQPGTHA*LAQPAGPPALQ
Trigger: CTGCAGGGCGGGCGGGCCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGCGGGCCATCGGCTTGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS GCA 72 bp AGCGCTCCAAGCCGATGGCCCGCAGCCAGGCACTCATaGCTGCCTCGCCCAGCCCGCTGGCCCGCCCGCCCT +
Preference number: 6 (lower is better)
Translates to: SAPSRWPAARHS*LPRPARWPARP
Trigger: AGGGCGGGCGGGCCAGCGGGCTGGGCGAGGCAGGCATGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS GCA 72 bp ATGCCTGCCTCGCCCAGCCCGCTGGCCCGCCCGCCCTaGAGGCACGGAGCCTCCTCTGCCAGGTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: MPASPSPLARPP*RHGASSARSSW
Trigger: CCAGGAAGACCTGGCAGAGGAGGCTCCGTGCCTGCAGGGCGGGCGGGCCAGCGGGCTGGGCGAGGCAGGCAT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS CCA 72 bp GGCTGGGCGTACAGGCCGATGAGCTCACCCAGGGTCTaGAAGCGGCGCACAGGCACACCCTGCGAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: GWAYRPMSSPRV*KRRTGTPCEVC
Trigger: GCAGACCTCGCAGGGTGTGCCTGTGCGCCGCTTCCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541544.1
ENST00000541756.5
CDS CCA 72 bp CGGATGCGGTCGTGCGTGAAGGTGGTCCAGTCCTCCTaGGAGTCCCGCTGTCTCCGCAGCAGCACCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RMRSCVKVVQSS*ESRCLRSSTSR
Trigger: GCGGCTGGTGCTGCTGCGGAGACAGCGGGACTCCCAGGAGGACTGGACCACCTTCACGCACGACCGCATCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS TCA 72 bp AGGGGCAGGGAGGGGACCTGCACACTGGGAAGTACCTaGGGCATCCCGGTCATCCGGTGGGTCCGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: RGREGTCTLGST*GIPVIRWVRLS
Trigger: CGAGAGCCGGACCCACCGGATGACCGGGATGCCTCAGGTACTTCCCAGTGTGCAGGTCCCCTCCCTGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541544.1
CDS CCA 72 bp TGCCAGGTCTTCCTGGATGCTCTCCCGGATGCGGGGTaGAGGGAAGCTGAGGGGCCGGCCATAGTCCGAGGG +
Preference number: 6 (lower is better)
Translates to: CQVFLDALPDAG*REAEGPAIVRG
Trigger: CCCTCGGACTATGGCCGGCCCCTCAGCTTCCCTCCACCCCGCATCCGGGAGAGCATCCAGGAAGACCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS TCA 72 bp ACACAAGGCCCTGGTTGGGCTGGGCGTACAGGCCGATaGGCTCACCCAGGGTCTGGAAGCGGCGCACAGGCA +
Preference number: 6 (lower is better)
Translates to: TQGPGWAGRTGR*AHPGSGSGAQA
Trigger: TGCCTGTGCGCCGCTTCCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541544.1
ENST00000541756.5
CDS CCA 72 bp GGAAGAAGCAGGGCGCACACAAGGCCCTGGTTGGGCTaGGCGTACAGGCCGATGAGCTCACCCAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GRSRAHTRPWLG*AYRPMSSPRVW
Trigger: CCAGACCCTGGGTGAGCTCATCGGCCTGTACGCCCAGCCCAACCAGGGCCTTGTGTGCGCCCTGCTTCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541544.1
ENST00000541756.5
CDS CCA 72 bp GCCCAGCAGGGGCATAGTCCACCTCGCTCAGCGTCTTaGCCATCTGCAGCACCGAGCAGGACCGGTCATCCC +
Preference number: 6 (lower is better)
Translates to: AQQGHSPPRSAS*PSAAPSRTGHP
Trigger: GGGATGACCGGTCCTGCTCGGTGCTGCAGATGGCCAAGACGCTGAGCGAGGTGGACTATGCCCCTGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CCA 72 bp TATGCACCAGGCCCTCCTCATAGCGCTCCAAGCCGATaGCCCGCAGCCAGGCACTCATGCCTGCCTCGCCCA +
Preference number: 6 (lower is better)
Translates to: YAPGPPHSAPSR*PAARHSCLPRP
Trigger: TGGGCGAGGCAGGCATGAGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCTATGAGGAGGGCCTGGTGCATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000320683.7
ENST00000538751.5
ENST00000541756.5
CDS TCA 72 bp CAGGACCTTGTCCACCTCACTGTGCAGCCTCCGGCATaGGGTAGCGAGGGTACGGGTGAGGTGGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: QDLVHLTVQPPA*GSEGTGEVGQV
Trigger: CACCTGCCCCACCTCACCCGTACCCTCGCTACCTCATGCCGGAGGCTGCACAGTGAGGTGGACAAGGTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 72 bp GGCCTGCACGGGGATGGTCTTGGCCTTACGTGTGGATaGCTGCGGAGCTGGGGGTGCTGTGGAGCTCATGTC +
Preference number: 6 (lower is better)
Translates to: GLHGDGLGLTCG*LRSWGCCGAHV
Trigger: GACATGAGCTCCACAGCACCCCCAGCTCCGCAGCCATCCACACGTAAGGCCAAGACCATCCCCGTGCAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 72 bp GGAGACAGGCCTGCGGGAGGGTCATGGGCTAGGGTATaGGAGCGGGAACAGGCCTCAGGTGAATGGGATGGG +
Preference number: 6 (lower is better)
Translates to: GDRPAGGSWARV*EREQASGEWDG
Trigger: CCCATCCCATTCACCTGAGGCCTGTTCCCGCTCCCATACCCTAGCCCATGACCCTCCCGCAGGCCTGTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537755.1
ENST00000541303.5
CDS GCA 72 bp GAAGAACTCCCCTCTCCCACACGAGGGTGCCGGTGGTaGCCAAGCTGTGGAGCAGGCACTGTAATGGCCACT +
Preference number: 6 (lower is better)
Translates to: EELPSPTRGCRW*PSCGAGTVMAT
Trigger: AGTGGCCATTACAGTGCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGAGGGGAGTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CAA 72 bp GAGGGCACATTGGTCCGGACCCCAGTTGGCTTCTGCTaGTGCCAGGCATATGTGTCCCGGGAACCCCGCTCA +
Preference number: 6 (lower is better)
Translates to: EGTLVRTPVGFC*CQAYVSREPRS
Trigger: TGAGCGGGGTTCCCGGGACACATATGCCTGGCACAAGCAGAAGCCAACTGGGGTCCGGACCAATGTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS CAA 72 bp GTGGCCGGTCCACTTCCACCCTCCTGGTGTTGCCTATaGGGCAGGAATGACCAGAACACCCCCGTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: VAGPLPPSWCCL*GRNDQNTPVSP
Trigger: TGGGGAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGGAAGTGGACCGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS CAA 72 bp GCCCAGCGAGAGCAGCCGCAGGATGTCCAAGTAGTTTaGGTTCCTCCTAGGGTGAGGGGTGCGTGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: AQREQPQDVQVV*VPPRVRGAWWG
Trigger: TCCCCACCACGCACCCCTCACCCTAGGAGGAACCAAAACTACTTGGACATCCTGCGGCTGCTCTCGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541303.5
CDS GCA 72 bp TCCTCATCTGAAGAACTCCCCTCTCCCACACGAGGGTaGCGGTGGTGCCCAAGCTGTGGAGCAGGCACTGTA +
Preference number: 6 (lower is better)
Translates to: SSSEELPSPTRG*RWCPSCGAGTV
Trigger: TACAGTGCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGAGGGGAGTTCTTCAGATGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CCA 72 bp CCTTCAGGGCCTGCTGCTGCAAAAGGCGGGTCACCATaGGCGAGCTCTGCTGGTCAAACACCTTGGACAGGA +
Preference number: 6 (lower is better)
Translates to: PSGPAAAKGGSP*ASSAGQTPWTG
Trigger: TCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGGCCCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540329.5
CDS TCA 72 bp GCACCAGCCGCCCACCCTCCACATCCACGCTCAGCGTaGACTTCTGTGACTTCCCAATCTTGGTCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: APAAHPPHPRSA*TSVTSQSWSGH
Trigger: GTGACCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGAGCGTGGATGTGGAGGGTGGGCGGCTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS GCA 72 bp TGCTGCTGCAAAAGGCGGGTCACCATGGGCGAGCTCTaGTGGTCAAACACCTTGGACAGGATCTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: CCCKRRVTMGEL*WSNTLDRISRP
Trigger: AGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS GCA 72 bp TGTGTGAAACGCAGAGAGATGTCAAAGGCATTGAGCTaGCGGTCGCCCAGCGAGAGCAGCCGCAGGATGTCC +
Preference number: 6 (lower is better)
Translates to: CVKRREMSKALS*RSPSESSRRMS
Trigger: GGACATCCTGCGGCTGCTCTCGCTGGGCGACCGGCAGCTCAATGCCTTTGACATCTCTCTGCGTTTCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
CDS GCA 72 bp GCCCATAGCTGCCTTTCAGGTAGTCGTGCGAGACGGTaGTCAGCCCATTGGGAGCACTTTGGGGAGGGGTTA +
Preference number: 6 (lower is better)
Translates to: AHSCLSGSRARR*SAHWEHFGEGL
Trigger: TAACCCCTCCCCAAAGTGCTCCCAATGGGCTGAGCACCGTCTCGCACGACTACCTGAAAGGCAGCTATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537656.1
CDS CCA 72 bp TGCTGCAAAAGGCGGGTCACCATGGGCGAGCTCTGCTaGTCAAACACCTTGGACAGGATCTCCAGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: CCKRRVTMGELC*SNTLDRISRPD
Trigger: GTCAGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 72 bp GTGGCAGGTTCTGCTGCTGCAAAAGGCGGGTCACCATaGGCGAGCTCTGCTGGTCAAACACCTTGGACAGGA +
Preference number: 6 (lower is better)
Translates to: VAGSAAAKGGSP*ASSAGQTPWTG
Trigger: TCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCAGCAGCAGAACCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000541756.5
CDS CCA 72 bp CTCTCCCACACGAGGGTGCCGGTGGTGCCCAAGCTGTaGAGCAGGCACTGTAATGGCCACTTTGTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: LSHTRVPVVPKL*SRHCNGHFVLG
Trigger: ACCAAGAACAAAGTGGCCATTACAGTGCCTGCTCCACAGCTTGGGCACCACCGGCACCCTCGTGTGGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CCA 72 bp GCTAGGGTATGGGAGCGGGAACAGGCCTCAGGTGAATaGGATGGGTGTAAAGAGACCATGGGAAAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: ARVWEREQASGE*DGCKETMGKAP
Trigger: GGGCGCCTTTCCCATGGTCTCTTTACACCCATCCCATTCACCTGAGGCCTGTTCCCGCTCCCATACCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537755.1
ENST00000541303.5
ENST00000544806.1
CDS CAA 72 bp AAGAGGTGTGTGAAACGCAGAGAGATGTCAAAGGCATaGAGCTGCCGGTCGCCCAGCGAGAGCAGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: KRCVKRREMSKA*SCRSPSESSRR
Trigger: CCTGCGGCTGCTCTCGCTGGGCGACCGGCAGCTCAATGCCTTTGACATCTCTCTGCGTTTCACACACCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
CDS CAA 72 bp CTGGGCTCCTGGCTCCCTCGGGACACAGAGGGGGCTTaGCTCTTTGCTCCTGCCTCATCCTTATCAATGCTG +
Preference number: 6 (lower is better)
Translates to: LGSWLPRDTEGA*LFAPASSLSML
Trigger: CAGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTCCCGAGGGAGCCAGGAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
ENST00000545355.5
CDS CAA 72 bp TGCCCAAGCTGTGGAGCAGGCACTGTAATGGCCACTTaGTTCTTGGTGGCAGATGGGACAGGGGCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: CPSCGAGTVMAT*FLVADGTGALA
Trigger: TGCCAGGGCCCCTGTCCCATCTGCCACCAAGAACAAAGTGGCCATTACAGTGCCTGCTCCACAGCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541752.1
ENST00000541756.5
CDS CAA 90 bp TGCAAAAGGCGGGTCACCATGGGCGAGCTCTGCTGGTCAAACACCTaGGACAGGATCTCCAGGCCTGACAGGACCTTGTCCACCTCACTG +
Preference number: 6 (lower is better)
Translates to: CKRRVTMGELCWSNT*DRISRPDRTLSTSL
Trigger: CAGTGAGGTGGACAAGGTCCTGTCAGGCCTGGAGATCCTGTCCAAGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537656.1
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CAA 90 bp GTTAATGATGTGGCCGGTCCACTTCCACCCTCCTGGTGTTGCCTATaGGGCAGGAATGACCAGAACACCCCCGTCTCCCCACCAGACCTA +
Preference number: 6 (lower is better)
Translates to: VNDVAGPLPPSWCCL*GRNDQNTPVSPPDL
Trigger: TAGGTCTGGTGGGGAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGGAAGTGGACCGGCCACATCATTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS TCA 72 bp ACTTCCACCCTCCTGGTGTTGCCTATTGGGCAGGAATaGCCAGAACACCCCCGTCTCCCCACCAGACCTACA +
Preference number: 6 (lower is better)
Translates to: TSTLLVLPIGQE*PEHPRLPTRPT
Trigger: TGTAGGTCTGGTGGGGAGACGGGGGTGTTCTGGTCATTCCTGCCCAATAGGCAACACCAGGAGGGTGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS CCA 72 bp AGGAAGACCTTGTGCTTCTCCCGCTCCAGGTTGAGCTaGTCCACCCTGAGGAGGGGCTCAAACTCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: RKTLCFSRSRLS*STLRRGSNSFL
Trigger: CAGGAAAGAGTTTGAGCCCCTCCTCAGGGTGGACCAGCTCAACCTGGAGCGGGAGAAGCACAAGGTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 72 bp TGTGTCCCGGGAACCCCGCTCATAGCGGTAGGTGGGTaGGAAGGAGATCTCCTCCTCACTGAATCGAAGGAA +
Preference number: 6 (lower is better)
Translates to: CVPGTPLIAVGG*EGDLLLTESKE
Trigger: TTCCTTCGATTCAGTGAGGAGGAGATCTCCTTCCCACCCACCTACCGCTATGAGCGGGGTTCCCGGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 72 bp TCCTCGCCACGGTGGGATAGGAAGGTCAGGAACTGTTaGGCCGTGCTGCCGATCATGGATTTGAGTGCAACC +
Preference number: 6 (lower is better)
Translates to: SSPRWDRKVRNC*AVLPIMDLSAT
Trigger: GGTTGCACTCAAATCCATGATCGGCAGCACGGCCCAACAGTTCCTGACCTTCCTATCCCACCGTGGCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 72 bp ATGGAGCCTCTGATATTGCCTGTCTCCTCGCCACGGTaGGATAGGAAGGTCAGGAACTGTTGGGCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: MEPLILPVSSPR*DRKVRNCWAVL
Trigger: CAGCACGGCCCAACAGTTCCTGACCTTCCTATCCCACCGTGGCGAGGAGACAGGCAATATCAGAGGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 72 bp AGGCCTCAGGTGAATGGGATGGGTGTAAAGAGACCATaGGAAAGGCGCCCCCTCACCGAGCCGTCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: RPQVNGMGVKRP*ERRPLTEPSSH
Trigger: ATGAGAAGACGGCTCGGTGAGGGGGCGCCTTTCCCATGGTCTCTTTACACCCATCCCATTCACCTGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537755.1
ENST00000541303.5
ENST00000544806.1
CDS CCA 72 bp CTAGAGGAGATAGTACCTGTGGCAACCAGGGCGGGATaGATCAGGTTATCTGCCTCTGGGCTGAGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: LEEIVPVATRAG*IRLSASGLRWG
Trigger: ACCCCACCTCAGCCCAGAGGCAGATAACCTGATCCATCCCGCCCTGGTTGCCACAGGTACTATCTCCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537656.1
CDS TCA 72 bp CCATCACAGGGTAGGAAGGCTTGCCACCCCTCTTCCTaGCGGACTGGAGAGAAATGGTTCCTCTCGTGGCAT +
Preference number: 6 (lower is better)
Translates to: PSQGRKACHPSS*RTGEKWFLSWH
Trigger: ATGCCACGAGAGGAACCATTTCTCTCCAGTCCGTCAGGAAGAGGGGTGGCAAGCCTTCCTACCCTGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS GCA 72 bp GAGATCTCCTCCTCACTGAATCGAAGGAAGACCTTGTaGTTCTCCCGCTCCAGGTTGAGCTGGTCCACCCTG +
Preference number: 6 (lower is better)
Translates to: EISSSLNRRKTL*FSRSRLSWSTL
Trigger: CAGGGTGGACCAGCTCAACCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCGATTCAGTGAGGAGGAGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 72 bp CTGGCTCCCTCGGGACACAGAGGGGGCTTTGCTCTTTaGTCCTGCCTCATCCTTATCAATGCTGATCCACTC +
Preference number: 6 (lower is better)
Translates to: LAPSGHRGGFAL*SCLILINADPL
Trigger: GAGTGGATCAGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTCCCGAGGGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 72 bp CCTCAGCTTGGTTTCCCTAAAACCACCTGCCCAGGCTaGACAGGGTTAATGATGTGGCCGGTCCACTTCCAC +
Preference number: 6 (lower is better)
Translates to: PQLGFPKTTCPG*TGLMMWPVHFH
Trigger: GTGGAAGTGGACCGGCCACATCATTAACCCTGTGCAGCCTGGGCAGGTGGTTTTAGGGAAACCAAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538751.5
ENST00000541756.5
CDS CCA 72 bp CCAGCCTCCTCCAAGTCCTCCTCGGTGATGTCACTGTaGAGTAAAACAGGCTGGGAAGTGAGATGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: PASSKSSSVMSL*SKTGWEVRWAR
Trigger: CCTTGCCCATCTCACTTCCCAGCCTGTTTTACTCCACAGTGACATCACCGAGGAGGACTTGGAGGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320683.7
CDS CCA 72 bp CTTTCAGGTAGTCGTGCGAGACGGTGCTCAGCCCATTaGGAGCACTTTGGGGAGGGGTTAAGAAGTCAGTGG +
Preference number: 6 (lower is better)
Translates to: LSGSRARRCSAH*EHFGEGLRSQW
Trigger: CCACTGACTTCTTAACCCCTCCCCAAAGTGCTCCCAATGGGCTGAGCACCGTCTCGCACGACTACCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537656.1
CDS CCA 72 bp CACAGTGATTGCATGGCAATCTGGGTAGAGAGTGCATaGTCACCACTGCCCTGCTGCACCCACTGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: HSDCMAIWVESA*SPLPCCTHCLH
Trigger: ATGCAGGCAGTGGGTGCAGCAGGGCAGTGGTGACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS CAA 90 bp CCCTCCACATCCACGCTCAGCGTGAACTTCTGTGACTTCCCAATCTaGGTCAGGTCACCCAGGGTCACATCTAGCTTCACCTCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: PSTSTLSVNFCDFPI*VRSPRVTSSFTSKA
Trigger: GGCCTTTGAGGTGAAGCTAGATGTGACCCTGGGTGACCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGAGCGTGGATGTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS TCA 72 bp CGCTTCCGGGCACTGACAAAGATGAAGTCCTTGCGCTaGGTCCGGTCCTTCTCCTTCTCAAACACAACACCC +
Preference number: 6 (lower is better)
Translates to: RFRALTKMKSLR*VRSFSFSNTTP
Trigger: GGGTGTTGTGTTTGAGAAGGAGAAGGACCGGACTCAGCGCAAGGACTTCATCTTTGTCAGTGCCCGGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS TCA 72 bp TTCAGGGTAGGATTTCCACAGAATCCGGTCACACCATaGGGGCACATTGGTCCGGACCCCAGTTGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: FRVGFPQNPVTP*GHIGPDPSWLL
Trigger: CAGAAGCCAACTGGGGTCCGGACCAATGTGCCCTCATGGTGTGACCGGATTCTGTGGAAATCCTACCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS TCA 72 bp CGCCCCCTCACCGAGCCGTCTTCTCATTTCCCGAGGTaGGGTGACAATTCACAAAGCCAAATGAGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: RPLTEPSSHFPR*GDNSQSQMRCH
Trigger: ATGGCACCTCATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAATGAGAAGACGGCTCGGTGAGGGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537755.1
ENST00000544806.1
CDS GCA 72 bp CCCTCGGGACACAGAGGGGGCTTTGCTCTTTGCTCCTaGCTCATCCTTATCAATGCTGATCCACTCGTAGAG +
Preference number: 6 (lower is better)
Translates to: PSGHRGGFALCS*LILINADPLVE
Trigger: CTCTACGAGTGGATCAGCATTGATAAGGATGAGGCAGGAGCAAAGAGCAAAGCCCCCTCTGTGTCCCGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
ENST00000545355.5
CDS CCA 72 bp TTCTCAAACACAACACCCAGCTTGTTCTGGACACGCTaGGACTTAATGAGCTGGCGGATGCGGTCGTGCGTG +
Preference number: 6 (lower is better)
Translates to: FSNTTPSLFWTR*DLMSWRMRSCV
Trigger: CACGCACGACCGCATCCGCCAGCTCATTAAGTCCCAGCGTGTCCAGAACAAGCTGGGTGTTGTGTTTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 72 bp CTCCCAGGGTTGCCCATGAAGTCAAGTAGGCTAGTTTaGAGGTGGTGTGTGAGGACAGGGTCCTGGACAAGA +
Preference number: 6 (lower is better)
Translates to: LPGLPMKSSRLV*RWCVRTGSWTR
Trigger: TCTTGTCCAGGACCCTGTCCTCACACACCACCTCCAAACTAGCCTACTTGACTTCATGGGCAACCCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538339.1
CDS CAA 72 bp AAGGAGATCTCCTCCTCACTGAATCGAAGGAAGACCTaGTGCTTCTCCCGCTCCAGGTTGAGCTGGTCCACC +
Preference number: 6 (lower is better)
Translates to: KEISSSLNRRKT*CFSRSRLSWST
Trigger: GGTGGACCAGCTCAACCTGGAGCGGGAGAAGCACAAGGTCTTCCTTCGATTCAGTGAGGAGGAGATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS TCA 72 bp TCCCAAAGACATAGATGTCATGGGGTATGGTCACTGTaGCCTCGTCCAGGGTCTTCCCCAGACCCTTCGATG +
Preference number: 6 (lower is better)
Translates to: SQRHRCHGVWSL*PRPGSSPDPSM
Trigger: CATCGAAGGGTCTGGGGAAGACCCTGGACGAGGTCACAGTGACCATACCCCATGACATCTATGTCTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538339.1
ENST00000538751.5
ENST00000541756.5
CDS TCA 72 bp CTGGGGACAAGGTTAGGGTCAGGAACAGAAGGGTCTTaGATTGGGATAAGAGAGCAGGGGGTCTCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: LGTRLGSGTEGS*IGIREQGVSGD
Trigger: GTCTCCAGAGACCCCCTGCTCTCTTATCCCAATTCAAGACCCTTCTGTTCCTGACCCTAACCTTGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537755.1
ENST00000541303.5
CDS CCA 72 bp TCCTTCTCCTTCTCAAACACAACACCCAGCTTGTTCTaGACACGCTGGGACTTAATGAGCTGGCGGATGCGG +
Preference number: 6 (lower is better)
Translates to: SFSFSNTTPSLF*TRWDLMSWRMR
Trigger: CCGCATCCGCCAGCTCATTAAGTCCCAGCGTGTCCAGAACAAGCTGGGTGTTGTGTTTGAGAAGGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CCA 72 bp GTAACTCCAACCTCAAATGTCCCAAACACGGGGGAATaGTCGCTGGTGACGATGTCATCAGTGCAACCTGGG +
Preference number: 6 (lower is better)
Translates to: VTPTSNVPNTGE*SLVTMSSVQPG
Trigger: CCCAGGTTGCACTGATGACATCGTCACCAGCGACCATTCCCCCGTGTTTGGGACATTTGAGGTTGGAGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545355.5
CDS CCA 72 bp GCCACCTTGATATTCCACAGTGATTGCATGGCAATCTaGGTAGAGAGTGCATGGTCACCACTGCCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ATLIFHSDCMAI*VESAWSPLPCC
Trigger: GCAGCAGGGCAGTGGTGACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTGGAATATCAAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS CAA 72 bp TCCACGCTCAGCGTGAACTTCTGTGACTTCCCAATCTaGGTCAGGTCACCCAGGGTCACATCTAGCTTCACC +
Preference number: 6 (lower is better)
Translates to: STLSVNFCDFPI*VRSPRVTSSFT
Trigger: GGTGAAGCTAGATGTGACCCTGGGTGACCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGAGCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000540329.5
ENST00000541756.5
CDS CAA 72 bp CCTGGGGACAAGGTTAGGGTCAGGAACAGAAGGGTCTaGAATTGGGATAAGAGAGCAGGGGGTCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: PGDKVRVRNRRV*NWDKRAGGLWR
Trigger: TCTCCAGAGACCCCCTGCTCTCTTATCCCAATTCAAGACCCTTCTGTTCCTGACCCTAACCTTGTCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537755.1
ENST00000541303.5
CDS TCA 72 bp TGGCTTGACCAGCACTGCCACCTTGATATTCCACAGTaGTTGCATGGCAATCGGGCGGTAATCCAGATCCGT +
Preference number: 6 (lower is better)
Translates to: WLDQHCHLDIPQ*LHGNRAVIQIR
Trigger: ACGGATCTGGATTACCGCCCGATTGCCATGCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000537755.1
ENST00000538751.5
ENST00000541756.5
CDS TCA 72 bp TCAGGAACTGTTGGGCCGTGCTGCCGATCATGGATTTaGGTGCAACCACACACTCCCCATAGGATTCATAGC +
Preference number: 6 (lower is better)
Translates to: SGTVGPCCRSWI*VQPHTPHRIHS
Trigger: GCTATGAATCCTATGGGGAGTGTGTGGTTGCACTCAAATCCATGATCGGCAGCACGGCCCAACAGTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 72 bp ACACTGGACGTACTGACATGGCTGATACGGTTCTCGTaGTCTGGCTTGACCAGCACTGCCACCTTGATATTC +
Preference number: 6 (lower is better)
Translates to: TLDVLTWLIRFS*SGLTSTATLIF
Trigger: GAATATCAAGGTGGCAGTGCTGGTCAAGCCAGAGCACGAGAACCGTATCAGCCATGTCAGTACGTCCAGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537755.1
ENST00000538751.5
ENST00000541756.5
ENST00000544806.1
CDS GCA 72 bp ACTTGGTGCGGCTGGCTGTCTTCACAATGGCCTCGATaGTCTCAAACTCAATGTAGGCCTGGTCTGAAGTCT +
Preference number: 6 (lower is better)
Translates to: TWCGWLSSQWPR*SQTQCRPGLKS
Trigger: AGACTTCAGACCAGGCCTACATTGAGTTTGAGAGCATCGAGGCCATTGTGAAGACAGCCAGCCGCACCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298229.7
ENST00000535985.1
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 72 bp ATTGGTTTGAGCGTGGGCAGCTGGCGTGAAGACCACTaGACTTTGAGGAAGTTGATGTTGTCACTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: IGLSVGSWREDH*TLRKLMLSLLW
Trigger: CCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCTCAAACCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 72 bp TCCATGGACTTGACTGTGAGCAGGAGGTGCTGGTCCTaGAGGTACTCGATATCAGCCAGAATTGGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: SMDLTVSRRCWS*RYSISARIGLS
Trigger: GCTCAAACCAATTCTGGCTGATATCGAGTACCTGCAGGACCAGCACCTCCTGCTCACAGTCAAGTCCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 72 bp GAACTGTTGGGCCGTGCTGCCGATCATGGATTTGAGTaGAACCACACACTCCCCATAGGATTCATAGCCATC +
Preference number: 6 (lower is better)
Translates to: ELLGRAADHGFE*NHTLPIGFIAI
Trigger: GATGGCTATGAATCCTATGGGGAGTGTGTGGTTGCACTCAAATCCATGATCGGCAGCACGGCCCAACAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS GCA 72 bp CACTGCCCTGCTGCACCCACTGCCTGCATTTCCCCCTaGACTATAAATAGACTTTTGTGTCCATCACAGGGT +
Preference number: 6 (lower is better)
Translates to: HCPAAPTACISP*TINRLLCPSQG
Trigger: ACCCTGTGATGGACACAAAAGTCTATTTATAGTGCAGGGGGAAATGCAGGCAGTGGGTGCAGCAGGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS CAA 90 bp TTGAGCGTGGGCAGCTGGCGTGAAGACCACTGCACTTTGAGGAAGTaGATGTTGTCACTGCTCTGGGCATCATTCTCAAAGCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LSVGSWREDHCTLRK*MLSLLWASFSKLFL
Trigger: CAAGAAGAGCTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS TCA 72 bp TGGCTTGACCAGCACTGCCACCTTGATATTCCACAGTaGTTGCATGGCAATCTGGGTAGAGAGTGCATGGTC +
Preference number: 6 (lower is better)
Translates to: WLDQHCHLDIPQ*LHGNLGRECMV
Trigger: GACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGTCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS CAA 72 bp ACTGCCTGCATTTCCCCCTGCACTATAAATAGACTTTaGTGTCCATCACAGGGTAGGAAGGCTTGCCACCCC +
Preference number: 6 (lower is better)
Translates to: TACISPCTINRL*CPSQGRKACHP
Trigger: GGGGTGGCAAGCCTTCCTACCCTGTGATGGACACAAAAGTCTATTTATAGTGCAGGGGGAAATGCAGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS CAA 90 bp AGAATTGGTTTGAGCGTGGGCAGCTGGCGTGAAGACCACTGCACTTaGAGGAAGTTGATGTTGTCACTGCTCTGGGCATCATTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: RIGLSVGSWREDHCT*RKLMLSLLWASFSK
Trigger: CTTTGAGAATGATGCCCAGAGCAGTGACAACATCAACTTCCTCAAAGTGCAGTGGTCTTCACGCCAGCTGCCCACGCTCAAACCAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
ENST00000545355.5
CDS TCA 72 bp TTTGGTTCCTCCGAGCCGTCTTCTCATTTCCCGAGGTaGGGTGACAATTCACAAAGCCAAATGAGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: FGSSEPSSHFPR*GDNSQSQMRCH
Trigger: ATGGCACCTCATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAATGAGAAGACGGCTCGGAGGAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541756.5
CDS TCA 72 bp CCTCAAATGTCCCAAACACGGGGGAATGGTCGCTGGTaGCGATGTCATCAGTGCAACCATAAGAATTGCAGA +
Preference number: 6 (lower is better)
Translates to: PQMSQTRGNGRW*RCHQCNHKNCR
Trigger: TCTGCAATTCTTATGGTTGCACTGATGACATCGTCACCAGCGACCATTCCCCCGTGTTTGGGACATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298229.7
ENST00000538751.5
ENST00000541303.5
ENST00000541756.5
CDS GCA 72 bp TTGACCAGCACTGCCACCTTGATATTCCACAGTGATTaGATGGCAATCTGGGTAGAGAGTGCATGGTCACCA +
Preference number: 6 (lower is better)
Translates to: LTSTATLIFHSD*MAIWVESAWSP
Trigger: TGGTGACCATGCACTCTCTACCCAGATTGCCATGCAATCACTGTGGAATATCAAGGTGGCAGTGCTGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544806.1
CDS TCA 72 bp ATTTCCCGAGGTGAGGTGACAATTCACAAAGCCAAATaGGGTGCCATTAAACATGAAGGAGACGCCCACAGC +
Preference number: 6 (lower is better)
Translates to: ISRGEVTIHKAK*GAIKHEGDAHS
Trigger: GCTGTGGGCGTCTCCTTCATGTTTAATGGCACCTCATTTGGCTTTGTGAATTGTCACCTCACCTCGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298229.7
ENST00000537755.1
ENST00000538751.5
ENST00000541756.5
ENST00000544806.1
CDS TCA 72 bp CTCTGTCCGGGAGGCTCTGACCATAAGAATTGCAGATaGTGTGAGTTTCAGGGTAGGATTTCCACAGAATCC +
Preference number: 6 (lower is better)
Translates to: LCPGGSDHKNCR*CEFQGRISTES
Trigger: GGATTCTGTGGAAATCCTACCCTGAAACTCACATCATCTGCAATTCTTATGGTCAGAGCCTCCCGGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545355.5