RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INPP5K (Homo sapiens)

Ensembl gene IDs: ENSG00000132376

Ensembl transcript IDs: ENST00000320345.10, ENST00000350761.9, ENST00000406424.8, ENST00000421807.7, ENST00000445774.2, ENST00000449479.5, ENST00000460733.5, ENST00000461552.1, ENST00000477115.1, ENST00000477910.5, ENST00000481867.1, ENST00000487039.1, ENST00000495339.1, ENST00000498390.5, ENST00000571274.5, ENST00000573790.5, ENST00000574561.1, ENST00000574955.1, ENST00000575172.5, ENST00000576646.7

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGTGTGACGCCGGCGGTATGGGAGTGTCGGGGCCAGCACAGGGCTaGCGCTTCAGCCTCCACAGGATGCGATCGGTCCATGCAGGCTTG +
Preference number: 1 (lower is better)
Translates to: KCDAGGMGVSGPAQG*RFSLHRMRSVHAGL
Trigger: CAAGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGAAGCGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCGCCGGCGTCACACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR TCA 90 bp GTACGTCATGTGGCTGCTGTAGCCCCTCAGAGACAAGGAGAAGTGTaGCGCCGGCGGTATGGGAGTGTCGGGGCCAGCACAGGGCTGCCG +
Preference number: 1 (lower is better)
Translates to: VRHVAAVAPQRQGEV*RRRYGSVGASTGLP
Trigger: CGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCTCTGAGGGGCTACAGCAGCCACATGACGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 90 bp TGCTGTAGCCCCTCAGAGACAAGGAGAAGTGTGACGCCGGCGGTATaGGAGTGTCGGGGCCAGCACAGGGCTGCCGCTTCAGCCTCCACA +
Preference number: 1 (lower is better)
Translates to: CCSPSETRRSVTPAV*ECRGQHRAAASAST
Trigger: TGTGGAGGCTGAAGCGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCTCTGAGGGGCTACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 90 bp CTCTGGCCTCCGCCTGGGATTCACTCCCATCCTGGCTCAGATCTGTaGCTGTGCTTCACCCAGTGGGTCCTCCCTCAAGGAGCCAGGCGG +
Preference number: 1 (lower is better)
Translates to: LWPPPGIHSHPGSDL*LCFTQWVLPQGARR
Trigger: CCGCCTGGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR GCA 90 bp CCTCCGCCTGGGATTCACTCCCATCCTGGCTCAGATCTGTGGCTGTaGTTCACCCAGTGGGTCCTCCCTCAAGGAGCCAGGCGGGATCTG +
Preference number: 1 (lower is better)
Translates to: PPPGIHSHPGSDLWL*FTQWVLPQGARRDL
Trigger: CAGATCCCGCCTGGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGGATGGGAGTGAATCCCAGGCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 90 bp CCGGCAGTGGAAAGGCAGAGCTGGCTGCCAGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGGCTCAGATCTGTGGCTGTGCTTCAC +
Preference number: 1 (lower is better)
Translates to: PAVERQSWLPALASA*DSLPSWLRSVAVLH
Trigger: GTGAAGCACAGCCACAGATCTGAGCCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGCTGGCAGCCAGCTCTGCCTTTCCACTGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR GCA 90 bp TCTCCCCTCCCAGACAGCCTGAGGCCCAGGACGGCACGACAAGAATaGAGGCCTGTGCCAAATGGGGCATGTGCCTGGCAGGACTACTTG +
Preference number: 1 (lower is better)
Translates to: SPLPDSLRPRTARQE*RPVPNGACAWQDYL
Trigger: CAAGTAGTCCTGCCAGGCACATGCCCCATTTGGCACAGGCCTGCATTCTTGTCGTGCCGTCCTGGGCCTCAGGCTGTCTGGGAGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR GCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTaGCAAGGACCACCCTGGAAAAGTCTGTGGCCACAGCTCCTTGAC +
Preference number: 1 (lower is better)
Translates to: RRQWLLTRVAQTHLT*QGPPWKSLWPQLLD
Trigger: GTCAAGGAGCTGTGGCCACAGACTTTTCCAGGGTGGTCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 90 bp ATTCACTCCCATCCTGGCTCAGATCTGTGGCTGTGCTTCACCCAGTaGGTCCTCCCTCAAGGAGCCAGGCGGGATCTGGAAGGGTCTGCT +
Preference number: 1 (lower is better)
Translates to: IHSHPGSDLWLCFTQ*VLPQGARRDLEGSA
Trigger: AGCAGACCCTTCCAGATCCCGCCTGGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGGATGGGAGTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 90 bp CCACAGCTCCTTGACCACTTGTCACCCCTTCCTCAGATGGCAGGGTaGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCC +
Preference number: 1 (lower is better)
Translates to: PQLLDHLSPLPQMAG*RHGTQATNGSEPGS
Trigger: GGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGGAAGGGGTGACAAGTGGTCAAGGAGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 90 bp CTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACCACCCTaGAAAAGTCTGTGGCCACAGCTCCTTGACCACTTGTCACCCCTT +
Preference number: 1 (lower is better)
Translates to: LTRVAQTHLTCQGPP*KSLWPQLLDHLSPL
Trigger: AAGGGGTGACAAGTGGTCAAGGAGCTGTGGCCACAGACTTTTCCAGGGTGGTCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 90 bp TCCAGTCCCACGGGCTGCTGGGGAAGTCCGAGGTTGAAGAGTAGCTaGCCATCATGTCATTTTCCACGGTCCACAGGTCCTCGGGCATCA +
Preference number: 1 (lower is better)
Translates to: SSPTGCWGSPRLKSS*PSCHFPRSTGPRAS
Trigger: TGATGCCCGAGGACCTGTGGACCGTGGAAAATGACATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCCAGCAGCCCGTGGGACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR TCA 90 bp CTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGACAGCCTaGGGCCCAGGACGGCACGACAAGAATGCAGGCCTGTGCCAAATG +
Preference number: 1 (lower is better)
Translates to: LCSLYKCEHLPSQTA*GPGRHDKNAGLCQM
Trigger: CATTTGGCACAGGCCTGCATTCTTGTCGTGCCGTCCTGGGCCTCAGGCTGTCTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 90 bp ACGGCACGACAAGAATGCAGGCCTGTGCCAAATGGGGCATGTGCCTaGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCA +
Preference number: 1 (lower is better)
Translates to: TARQECRPVPNGACA*QDYLGKTRRGGRNP
Trigger: TGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGCACAGGCCTGCATTCTTGTCGTGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 90 bp GGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTaGATCCTTCCCAGTTCTCTCTGTCAGGATCTGGAACTTCCATGC +
Preference number: 1 (lower is better)
Translates to: GRVEAWDSSYQRKRT*ILPSSLCQDLELPC
Trigger: GCATGGAAGTTCCAGATCCTGACAGAGAGAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 90 bp GCAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATaGGATGCCAAGACTCCTGGAATCCAGCACTGCTTGCACCAGTCT +
Preference number: 1 (lower is better)
Translates to: AEIPDPLLTPHGDKL*DAKTPGIQHCLHQS
Trigger: AGACTGGTGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 90 bp TCTCTGTCAGGATCTGGAACTTCCATGCAGTCAGACTCCATGCCGTaGGTAGGGAGGAAGGTTGTGCTGGCCGAAGGACCCTCATCAACC +
Preference number: 1 (lower is better)
Translates to: SLSGSGTSMQSDSMP*VGRKVVLAEGPSST
Trigger: GGTTGATGAGGGTCCTTCGGCCAGCACAACCTTCCTCCCTACTCACGGCATGGAGTCTGACTGCATGGAAGTTCCAGATCCTGACAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 90 bp GTACAGTCCAATCCAGTCCCACGGGCTGCTGGGGAAGTCCGAGGTTaGAGAGTAGCTGACCATCATGTCATTTTCCACGGTCCACAGGTC +
Preference number: 1 (lower is better)
Translates to: VQSNPVPRAAGEVRG*RVADHHVIFHGPQV
Trigger: GACCTGTGGACCGTGGAAAATGACATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCCAGCAGCCCGTGGGACTGGATTGGACTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 90 bp CCAAACCAGATAATGAGGCCAGGCTCACTCGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTC +
Preference number: 1 (lower is better)
Translates to: PNQIMRPGSLVVQDV*DVSPLTILHLQDPV
Trigger: GACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAGCCTGGCCTCATTATCTGGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
3UTR GCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATaGCAAGACTCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTA +
Preference number: 1 (lower is better)
Translates to: NPRPSAHSSRGQAMR*QDSWNPALLAPVYV
Trigger: TACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 90 bp AACGGAAGCGAACCTGGATCCTTCCCAGTTCTCTCTGTCAGGATCTaGAACTTCCATGCAGTCAGACTCCATGCCGTGAGTAGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: NGSEPGSFPVLSVRI*NFHAVRLHAVSREE
Trigger: TTCCTCCCTACTCACGGCATGGAGTCTGACTGCATGGAAGTTCCAGATCCTGACAGAGAGAACTGGGAAGGATCCAGGTTCGCTTCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR GCA 90 bp GGGACAAGCTATGAGATGCCAAGACTCCTGGAATCCAGCACTGCTTaGACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCC +
Preference number: 1 (lower is better)
Translates to: GTSYEMPRLLESSTA*TSLCSLYKCEHLPS
Trigger: GGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 90 bp TCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACTCCTaGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAAT +
Preference number: 1 (lower is better)
Translates to: SAHSSRGQAMRCQDS*NPALLAPVYVACTN
Trigger: ATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 90 bp ATTCCAATAACATATATGTCAAGATTGAGGTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACG +
Preference number: 1 (lower is better)
Translates to: IPITYMSRLRFRLFS*SRSLRSRGGAAEAT
Trigger: CGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAACCTCAATCTTGACATATATGTTATTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574955.1
3UTR TCA 90 bp GTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCAAATaGGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACAC +
Preference number: 1 (lower is better)
Translates to: VFKRLIPEMSSGESK*AWLELTLGGVCGRH
Trigger: GTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCTCATTTGCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCTTCAGGGGGCCAGGCTaGGCCCCCAGCACTCCCGGC +
Preference number: 2 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAFRGPG*APSTPG
Trigger: GCCGGGAGTGCTGGGGGCCCAGCCTGGCCCCCTGAA...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCATTCAGGGGGCCAGGCTaGGCCCCCAGCACTCCCGGC +
Preference number: 2 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPFRGPG*APSTPG
Trigger: GCCGGGAGTGCTGGGGGCCCAGCCTGGCCCCCTGAA...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCCCTCCCAGACAGCCTaGGGCCCAGGACGGCACGAC +
Preference number: 2 (lower is better)
Translates to: HTQACGGEYATQSNWSNPPSQTA*GPGRHD
Trigger: GTCGTGCCGTCCTGGGCCTCAGGCTGTCTGGGAGGG...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQALASA*DSLPSW
Trigger: CCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGC...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGGCAGGGTGGAGGCATaGGACTCAAGCTACCAACGG +
Preference number: 2 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGGRVEA*DSSYQR
Trigger: CCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGCACGGGGACAAGCTATaGGATGCCAAGACTCCTGGA +
Preference number: 2 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRHGDKL*DAKTPG
Trigger: TCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTG...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACGGCACGACAAGAATaGAGGCCTGTGCCAAATGGG +
Preference number: 2 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRTARQE*RPVPNG
Trigger: CCCATTTGGCACAGGCCTGCATTCTTGTCGTGCCGT...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAAATCCCAGACCCTCTaGTCACTCCTCACGGGGACA +
Preference number: 2 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRKSQTL*SLLTGT
Trigger: TGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTT...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGGGCCCCTCCATTCTaGCCACTGAGTCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPGAPPF*PLSQTA
Trigger: AGCAGTCTGACTCAGTGGGCAGAATGGAGGGGCCCC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GGTCAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: GQSAPAAGNCWKCGEAGGALASA*DSLPSW
Trigger: CCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGC...GCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGCTGGCTGCCAGCTCTaGCCTCCGCCTGGGATTCAC +
Preference number: 2 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPAGCQL*PPPGIH
Trigger: GTGAATCCCAGGCGGAGGCCAGAGCTGGCAGCCAGC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTCATGGCGTAAGAGCCTaGCTAGAGGGGCCCCTCCAT +
Preference number: 2 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPHGVRA*LEGPLH
Trigger: ATGGAGGGGCCCCTCTAGCCAGGCTCTTACGCCATG...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGGGAGGAAGGTTGTGCTaGCCGAAGGACCCTCATCAA +
Preference number: 2 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRGGRLC*PKDPHQ
Trigger: TTGATGAGGGTCCTTCGGCCAGCACAACCTTCCTCC...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CACAGGGCTGCCGCTTCAGCCTCCACAGGATGCGATCGGTCCATGCAGGCTTGCATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 2 (lower is better)
Translates to: HRAAASASTGCDRSMQACMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...GCAAGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGAAGCGGCAGCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CCA 90 bp GGATCTGGAAGGGTCTGCTTATCCCCACCACAGAACGCAGACTGTTGCTGTAGTAGTAGGCGGCCCTCCTaGAACTCCCGGAGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: GSGRVCLSPPQNADCCCSSRRPS*NSRSSG
Trigger: CCCGCTGCTCCGGGAGTTCCAGGAGGGCCGCCTACT...ACTACAGCAACAGTCTGCGTTCTGTGGTGGGGATAAGCAGACCCTTCCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR GCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGTCCTGGGAAAAGGGCTaGCGAGTGACCATGGCGGAG +
Preference number: 2 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQSWEKG*RVTMAE
Trigger: CTCCGCCATGGTCACTCGGCAGCCCTTTTCCCAGGA...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp TTTCCACGGTCCACAGGTCCTCGGGCATCAGGACGATCAGCGGAGCAGACACCACGTACGTCATGTGGCTaGTGTAGCCCCTCAGAGACA +
Preference number: 2 (lower is better)
Translates to: FPRSTGPRASGRSAEQTPRTSCG*CSPSET
Trigger: TGTCTCTGAGGGGCTACAGCAGCCACATGACGTACG...TGGTGTCTGCTCCGCTGATCGTCCTGATGCCCGAGGACCTGTGGACCGTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACCTGGCAGGACTACTTaGGCAAGACTAGAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGPGRTT*ARLEEG
Trigger: CCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCCAGGCCTGTGCCAAATaGGGCATGTGCCTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFQACAK*GMCLAG
Trigger: TCCTGCCAGGCACATGCCCCATTTGGCACAGGCCTG...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGGAGGAAGGTTGTGCTaGCCGAAGGACCCTCATCAA +
Preference number: 2 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGGGRLC*PKDPHQ
Trigger: TTGATGAGGGTCCTTCGGCCAGCACAACCTTCCTCC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CAA 90 bp CAAGGACCACCCTGGAAAAGTCTGTGGCCACAGCTCCTTGACCACTaGTCACCCCTTCCTCAGATGGCAGGGTGGAGGCATGGGACTCAA +
Preference number: 2 (lower is better)
Translates to: QGPPWKSLWPQLLDH*SPLPQMAGWRHGTQ
Trigger: TTGAGTCCCATGCCTCCACCCTGCCATCTGAGGAAGGGGTGACAAGTGGTCAAGGAGCTGTGGCCACAGACTTTTCCAGGGTGGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACTCCATTCTGCCCACTaGGTCAGACTGCTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGLHSAH*VRLLLL
Trigger: CAGCAAAAGCAGTCTGACTCAGTGGGCAGAATGGAG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTTCAGACTCCATGCCGTaGGTAGGGAGGAAGGTTGTG +
Preference number: 2 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPSDSMP*VGRKVV
Trigger: CACAACCTTCCTCCCTACTCACGGCATGGAGTCTGA...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGAAATCCCAGACCCTCTaGTCACTCCTCACGGGGACA +
Preference number: 2 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQKSQTL*SLLTGT
Trigger: TGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTT...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCATGGCGGAGGCAAGTaGTGGATGTGGGGACAGGCC +
Preference number: 2 (lower is better)
Translates to: HTQACGGEYATQSNWSNPHGGGK*WMWGQA
Trigger: GGCCTGTCCCCACATCCAGCACTTGCCTCCGCCATG...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLALASA*DSLPSW
Trigger: CCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGC...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGCCTGGCAGGACTACTTaGGCAAGACTAGAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQPGRTT*ARLEEG
Trigger: CCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGG...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGCCTCAGATGGCAGGGTaGAGGCATGGGACTCAAGCT +
Preference number: 2 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQPQMAG*RHGTQA
Trigger: AGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp TCCACGGTCCACAGGTCCTCGGGCATCAGGACGATCAGCGGAGCAGACACCAATGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: STVHRSSGIRTISGADTNAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...ATTGGTGTCTGCTCCGCTGATCGTCCTGATGCCCGAGGACCTGTGGACCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CCA 90 bp CCCGACCCAGGCATAGGACACGTAGTCATTAACGTCCCGCAGCCCCACCTTGTAGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACA +
Preference number: 2 (lower is better)
Translates to: PDPGIGHVVINVPQPHLVVVQDV*DVSPLT
Trigger: TGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC...TACAAGGTGGGGCTGCGGGACGTTAATGACTACGTGTCCTATGCCTGGGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR TCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACCAGGTCTTCACTGTTaGCACACTAGCTGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGPGLHC*HTSWFH
Trigger: GTGAAACCAGCTAGTGTGTCAACAGTGAAGACCTGG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGCTCCATTCTGCCCACTaGGTCAGACTGCTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQLHSAH*VRLLLL
Trigger: CAGCAAAAGCAGTCTGACTCAGTGGGCAGAATGGAG...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTGTCGTCAATGGCTCCTaGCAAGGGTGGCACAGACGC +
Preference number: 2 (lower is better)
Translates to: HTQACGGEYATQSNWSNPVVNGS*QGWHRR
Trigger: GCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGAC...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGCCAAATGGGGCATGTaGCTGGCAGGACTACTTGGG +
Preference number: 2 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPAKWGM*LAGLLG
Trigger: CCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp TGCCGTACGTCATGTGGCTGCTGTAGCCCCTCAGAGACAAGGAGAAGTGTGACGCGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 2 (lower is better)
Translates to: CRTSCGCCSPSETRRSVTRPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...CGTCACACTTCTCCTTGTCTCTGAGGGGCTACAGCAGCCACATGACGTACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR GCA 90 bp GGTCAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCCGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 2 (lower is better)
Translates to: GQSAPAAGNCWKCGEAGGRPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...GCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
3UTR-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGTATGTGGACGACACTTaGCTGTCTCTTCAGGGGGCC +
Preference number: 2 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQYVDDT*LSLQGA
Trigger: GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATA...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTGGCAGGGTGGAGGCATaGGACTCAAGCTACCAACGG +
Preference number: 2 (lower is better)
Translates to: HTQACGGEYATQSNWSNPGRVEA*DSSYQR
Trigger: CCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCC...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR CAA 90 bp GAATGCAGGCCTGTGCCAAATGGGGCATGTGCCTGGCAGGACTACTaGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAATGAGACGC +
Preference number: 2 (lower is better)
Translates to: ECRPVPNGACAWQDY*GKTRRGGRNPEMRR
Trigger: GCGTCTCATTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGCACAGGCCTGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTCCAGGTCTTCACTGTTaGCACACTAGCTGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPPGLHC*HTSWFH
Trigger: GTGAAACCAGCTAGTGTGTCAACAGTGAAGACCTGG...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGCTCCATTCTGCCCACTaGGTCAGACTGCTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQLHSAH*VRLLLL
Trigger: CAGCAAAAGCAGTCTGACTCAGTGGGCAGAATGGAG...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCACGGCACGACAAGAATaGAGGCCTGTGCCAAATGGG +
Preference number: 2 (lower is better)
Translates to: RTPGPDPPKCLELVLPSATARQE*RPVPNG
Trigger: CCCATTTGGCACAGGCCTGCATTCTTGTCGTGCCGT...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGAATCCAGCACTGCTTaGACCAGTCTATGTAGCCTG +
Preference number: 2 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPESSTA*TSLCSL
Trigger: CAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp GGATCTGGAAGGGTCTGCTTATCCCCACCACAGAACGCAGACTGTTGCTGTAGTGCTCCAAGTCGAACGTaGCGGAGACAGGCTTGTGGT +
Preference number: 2 (lower is better)
Translates to: GSGRVCLSPPQNADCCCSAPSRT*RRQACG
Trigger: ACCACAAGCCTGTCTCCGGCACGTTCGACTTGGAGC...ACTACAGCAACAGTCTGCGTTCTGTGGTGGGGATAAGCAGACCCTTCCAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: SWNPALLAPVYVACTNVSALASA*DSLPSW
Trigger: CCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGC...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCTCTGGGAGGAGTATGTaGACGACACTTGGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFSGRSM*TTLGCL
Trigger: GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGA...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp CTCACTCGTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTGGCCAGGCTCACTCGTaGTCCAGGATGTTTGGGATG +
Preference number: 2 (lower is better)
Translates to: LTRGPGCLGCLAPHNSASGQAHS*SRMFGM
Trigger: CATCCCAAACATCCTGGACCACGAGTGAGCCTGGCC...AGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
3UTR CAA 90 bp TCCAAACCAGATAATGAGGCCAGGCTCACTCGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGT +
Preference number: 2 (lower is better)
Translates to: SKPDNEARLTRGPGC*GCLAPHNSASPGSG
Trigger: ACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAGCCTGGCCTCATTATCTGGTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
3UTR-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCCCCTCCCAGACAGCCTaGGGCCCAGGACGGCACGAC +
Preference number: 2 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESPSQTA*GPGRHD
Trigger: GTCGTGCCGTCCTGGGCCTCAGGCTGTCTGGGAGGG...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGGAATCCAGCACTGCTTaGACCAGTCTATGTAGCCTG +
Preference number: 2 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQESSTA*TSLCSL
Trigger: CAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTC...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAATATGTGGACGACACTTaGCTGTCTCTTCAGGGGGCC +
Preference number: 2 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKYVDDT*LSLQGA
Trigger: GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATA...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTTGATTCTGGGAGGAGTATGTaGACGACACTTGGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: VLQPLVIVGNVGRQVAVDSGRSM*TTLGCL
Trigger: GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGA...ATCAACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTCTCTCTGTCAGGATCTaGAACTTCCATGCAGTCAGA +
Preference number: 2 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPLSVRI*NFHAVR
Trigger: TCTGACTGCATGGAAGTTCCAGATCCTGACAGAGAG...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCCAACGGAAGCGAACCTaGATCCTTCCCAGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAQRKRT*ILPSSL
Trigger: GAGAGAACTGGGAAGGATCCAGGTTCGCTTCCGTTG...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp TCGTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 2 (lower is better)
Translates to: SWSRMFGMSRPSQFCISRMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...CCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
3UTR-3UTR CCA 90 bp CAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: QSAPAAGNCWKCGEAGGSAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...ACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
3UTR-3UTR TCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAGTAGGAATCCAGAAATaGGACGCAGAACTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLVGIQK*DAELSP
Trigger: TGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTAC...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGTAGGAATCCAGAAATaGGACGCAGAACTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPVGIQK*DAELSP
Trigger: TGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTAC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGGGACAAGCTATGAGATaGCAAGACTCCTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWGQAMR*QDSWNP
Trigger: TGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCC...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp TCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 2 (lower is better)
Translates to: SPGSGQSAPAAGNCWKCGMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...CCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
3UTR-3UTR TCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTATCAGACTGCTTTTGCTaGAAGCAGAAATCCCAGACC +
Preference number: 2 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLSDCFC*KQKSQT
Trigger: GGTCTGGGATTTCTGCTTTCAGCAAAAGCAGTCTGA...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp ACGCTAATAATTACCCCTGCACAATGTAACAGTCACAAAACAGCCAGCCATGGCGGGGCCCCTCCATTCTaGCCACTGAGTCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: TLIITPAQCNSHKTASHGGAPPF*PLSQTA
Trigger: AGCAGTCTGACTCAGTGGGCAGAATGGAGGGGCCCC...GCCATGGCTGGCTGTTTTGTGACTGTTACATTGTGCAGGGGTAATTATTAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000421807.7
3UTR-3UTR GCA 90 bp CCGAAAGTTCATGTCTCCAAACCAGATAATGAGGCCAGGCTCACTCGTGGTCCAAGTAAGAGGATCCCCTaGATACGGACATGGGAGACC +
Preference number: 2 (lower is better)
Translates to: PKVHVSKPDNEARLTRGPSKRIP*IRTWET
Trigger: GGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACT...TGGACCACGAGTGAGCCTGGCCTCATTATCTGGTTTGGAGACATGAACTTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576646.7
3UTR-3UTR CCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGTCTGGGAGGAGTATGTaGACGACACTTGGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQSGRSM*TTLGCL
Trigger: GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGA...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR GCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCCATGGCGGAGGCAAGTaGTGGATGTGGGGACAGGCC +
Preference number: 2 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESHGGGK*WMWGQA
Trigger: GGCCTGTCCCCACATCCAGCACTTGCCTCCGCCATG...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp ACGCTAATAATTACCCCTGCACAATGTAACAGTCACAAAACAGCCAGCCATGGCCCTCAGATGGCAGGGTaGAGGCATGGGACTCAAGCT +
Preference number: 2 (lower is better)
Translates to: TLIITPAQCNSHKTASHGPQMAG*RHGTQA
Trigger: AGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG...GCCATGGCTGGCTGTTTTGTGACTGTTACATTGTGCAGGGGTAATTATTAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421807.7
3UTR-3UTR CCA 90 bp GTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATAATGAGGCCAGGCTCACTGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: VLDPKVHVSKPDNEARLTAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...AGTGAGCCTGGCCTCATTATCTGGTTTGGAGACATGAACTTTCGGATCGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
3UTR-3UTR TCA 90 bp GCAAATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACATGGGAAAGCACATCCATaGGGAAACTGCTCCACGAGT +
Preference number: 2 (lower is better)
Translates to: ANADTWQRPVRGSPAYGHGKAHP*GNCSTS
Trigger: ACTCGTGGAGCAGTTTCCTCATGGATGTGCTTTCCC...ATGTCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
3UTR-3UTR GCA 90 bp CCGAAAGTTCATGTCTCCAAACCAGATAATGAGGCCAGGCTCACTCGTGGTCCAGATTCCCGAACAAAGTaGAACCCAAAGTCCTCGATC +
Preference number: 2 (lower is better)
Translates to: PKVHVSKPDNEARLTRGPDSRTK*NPKSSI
Trigger: GATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC...TGGACCACGAGTGAGCCTGGCCTCATTATCTGGTTTGGAGACATGAACTTTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
3UTR-3UTR TCA 90 bp ACGCTAATAATTACCCCTGCACAATGTAACAGTCACAAAACAGCCAGCCATGGCCCAGGTCTTCACTGTTaGCACACTAGCTGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: TLIITPAQCNSHKTASHGPGLHC*HTSWFH
Trigger: GTGAAACCAGCTAGTGTGTCAACAGTGAAGACCTGG...GCCATGGCTGGCTGTTTTGTGACTGTTACATTGTGCAGGGGTAATTATTAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421807.7
3UTR-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCCTAGAGGGTGTTCTCTaGAGAACCCCAGGGCCAGAT +
Preference number: 2 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESLEGVL*RTPGPD
Trigger: ATCTGGCCCTGGGGTTCTTCAGAGAACACCCTCTAG...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGGGGAAGTCCGAGGTTaGAGAGTAGCTGACCATCAT +
Preference number: 2 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESGEVRG*RVADHH
Trigger: ATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR GCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGATCTGGAACTTCCATaGAGTCAGACTCCATGCCGT +
Preference number: 2 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESDLELP*SQTPCR
Trigger: ACGGCATGGAGTCTGACTGCATGGAAGTTCCAGATC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CCA 90 bp GCTTATCCCCACCACAGAACGCAGACTGTTGCTGTAGTAACAGAGGAGAAACTCTGGTGTCATAGTCGTTaGAGTTCCTATCAAACTTGT +
Preference number: 2 (lower is better)
Translates to: AYPHHRTQTVAVVTEEKLWCHSR*SSYQTC
Trigger: ACAAGTTTGATAGGAACTCCAACGACTATGACACCA...GAGTTTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTGTGGTGGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR GCA 72 bp GCCGGCGGTATGGGAGTGTCGGGGCCAGCACAGGGCTaGCGCTTCAGCCTCCACAGGATGCGATCGGTCCAT +
Preference number: 3 (lower is better)
Translates to: AGGMGVSGPAQG*RFSLHRMRSVH
Trigger: ATGGACCGATCGCATCCTGTGGAGGCTGAAGCGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 72 bp CCCTCAGAGACAAGGAGAAGTGTGACGCCGGCGGTATaGGAGTGTCGGGGCCAGCACAGGGCTGCCGCTTCA +
Preference number: 3 (lower is better)
Translates to: PSETRRSVTPAV*ECRGQHRAAAS
Trigger: TGAAGCGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCTCTGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR TCA 72 bp GTGGCTGCTGTAGCCCCTCAGAGACAAGGAGAAGTGTaGCGCCGGCGGTATGGGAGTGTCGGGGCCAGCACA +
Preference number: 3 (lower is better)
Translates to: VAAVAPQRQGEV*RRRYGSVGAST
Trigger: TGTGCTGGCCCCGACACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCTCTGAGGGGCTACAGCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 72 bp GAAAGGCAGAGCTGGCTGCCAGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGGCTCAGATCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: ERQSWLPALASA*DSLPSWLRSVA
Trigger: AGCCACAGATCTGAGCCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGCTGGCAGCCAGCTCTGCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR GCA 72 bp TGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTaGCAAGGACCACCCTGGAAAAGTCTGTGGCCACAG +
Preference number: 3 (lower is better)
Translates to: WLLTRVAQTHLT*QGPPWKSLWPQ
Trigger: CTGTGGCCACAGACTTTTCCAGGGTGGTCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 72 bp CATCCTGGCTCAGATCTGTGGCTGTGCTTCACCCAGTaGGTCCTCCCTCAAGGAGCCAGGCGGGATCTGGAA +
Preference number: 3 (lower is better)
Translates to: HPGSDLWLCFTQ*VLPQGARRDLE
Trigger: TTCCAGATCCCGCCTGGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 72 bp CCGCCTGGGATTCACTCCCATCCTGGCTCAGATCTGTaGCTGTGCTTCACCCAGTGGGTCCTCCCTCAAGGA +
Preference number: 3 (lower is better)
Translates to: PPGIHSHPGSDL*LCFTQWVLPQG
Trigger: TCCTTGAGGGAGGACCCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGGATGGGAGTGAATCCCAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 72 bp CAGGACGGCACGACAAGAATGCAGGCCTGTGCCAAATaGGGCATGTGCCTGGCAGGACTACTTGGGCAAGAC +
Preference number: 3 (lower is better)
Translates to: QDGTTRMQACAK*GMCLAGLLGQD
Trigger: GTCTTGCCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGCACAGGCCTGCATTCTTGTCGTGCCGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 72 bp GTGGCACAGACGCACCTCACCTGCCAAGGACCACCCTaGAAAAGTCTGTGGCCACAGCTCCTTGACCACTTG +
Preference number: 3 (lower is better)
Translates to: VAQTHLTCQGPP*KSLWPQLLDHL
Trigger: CAAGTGGTCAAGGAGCTGTGGCCACAGACTTTTCCAGGGTGGTCCTTGGCAGGTGAGGTGCGTCTGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 72 bp CCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATaGGATGCCAAGACTCCTGGAATCCAGCACTGCTTG +
Preference number: 3 (lower is better)
Translates to: PDPLLTPHGDKL*DAKTPGIQHCL
Trigger: CAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR GCA 72 bp CCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATaGCAAGACTCCTGGAATCCAGCACTGCTTGCACCA +
Preference number: 3 (lower is better)
Translates to: PSAHSSRGQAMR*QDSWNPALLAP
Trigger: TGGTGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR GCA 72 bp TCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGC +
Preference number: 3 (lower is better)
Translates to: SRMFGMSRPSQF*ISRIRSKCSSR
Trigger: GCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
3UTR CCA 72 bp CTTGACCACTTGTCACCCCTTCCTCAGATGGCAGGGTaGAGGCATGGGACTCAAGCTACCAACGGAAGCGAA +
Preference number: 3 (lower is better)
Translates to: LDHLSPLPQMAG*RHGTQATNGSE
Trigger: TTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGGAAGGGGTGACAAGTGGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 72 bp ACGGGCTGCTGGGGAAGTCCGAGGTTGAAGAGTAGCTaGCCATCATGTCATTTTCCACGGTCCACAGGTCCT +
Preference number: 3 (lower is better)
Translates to: TGCWGSPRLKSS*PSCHFPRSTGP
Trigger: AGGACCTGTGGACCGTGGAAAATGACATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCCAGCAGCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR GCA 72 bp TGTAAACCTGGTTCAGGTTGTCGCTGCAGGAGACCTTaGTGTCCCCGACCCAGGCATAGGACACGTAGTCAT +
Preference number: 3 (lower is better)
Translates to: CKPGSGCRCRRP*CPRPRHRTRSH
Trigger: ATGACTACGTGTCCTATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACCAGGTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CAA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGGCCTGGCAGGACTACTaGGGCAAGACTAGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQAWQDY*GKTRRG
Trigger: CCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGC...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CAA 90 bp CACTGGTGTCATAGTCGTTGGAGTTCCTATCAAACTTGTAGGTGGGCGGGAAGACGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: HWCHSRWSSYQTCRWAGRRGPGC*GCLAPH
Trigger: GTGAGGGGCGAGACATCCCAAACATCCTGGACCACG...TCTTCCCGCCCACCTACAAGTTTGATAGGAACTCCAACGACTATGACACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR TCA 72 bp AATCCAGTCCCACGGGCTGCTGGGGAAGTCCGAGGTTaGAGAGTAGCTGACCATCATGTCATTTTCCACGGT +
Preference number: 3 (lower is better)
Translates to: NPVPRAAGEVRG*RVADHHVIFHG
Trigger: ACCGTGGAAAATGACATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCCAGCAGCCCGTGGGACTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR CCA 72 bp CTGTGCCAAATGGGGCATGTGCCTGGCAGGACTACTTaGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAA +
Preference number: 3 (lower is better)
Translates to: LCQMGHVPGRTT*ARLEEGVGIQK
Trigger: TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 72 bp TCCTCACGGGGACAAGCTATGAGATGCCAAGACTCCTaGAATCCAGCACTGCTTGCACCAGTCTATGTAGCC +
Preference number: 3 (lower is better)
Translates to: SSRGQAMRCQDS*NPALLAPVYVA
Trigger: GGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 72 bp GAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTaGATCCTTCCCAGTTCTCTCTGTCAGGATCTGGAA +
Preference number: 3 (lower is better)
Translates to: EAWDSSYQRKRT*ILPSSLCQDLE
Trigger: TTCCAGATCCTGACAGAGAGAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CCA 72 bp ATAATGAGGCCAGGCTCACTCGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACAATTCTGCATCTCCAG +
Preference number: 3 (lower is better)
Translates to: IMRPGSLVVQDV*DVSPLTILHLQ
Trigger: CTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAGCCTGGCCTCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
3UTR CCA 72 bp GAACCTGGATCCTTCCCAGTTCTCTCTGTCAGGATCTaGAACTTCCATGCAGTCAGACTCCATGCCGTGAGT +
Preference number: 3 (lower is better)
Translates to: EPGSFPVLSVRI*NFHAVRLHAVS
Trigger: ACTCACGGCATGGAGTCTGACTGCATGGAAGTTCCAGATCCTGACAGAGAGAACTGGGAAGGATCCAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR TCA 72 bp ACATATATGTCAAGATTGAGGTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCTAGAGGGGGCGCTGCC +
Preference number: 3 (lower is better)
Translates to: TYMSRLRFRLFS*SRSLRSRGGAA
Trigger: GGCAGCGCCCCCTCTAGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAACCTCAATCTTGACATATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574955.1
3UTR CCA 72 bp TCCAAACCAGATAATGAGGTCGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACAATTCTGCATCTCCAG +
Preference number: 3 (lower is better)
Translates to: SKPDNEVVVQDV*DVSPLTILHLQ
Trigger: CTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGACCTCATTATCTGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR GCA 72 bp AGGGTCTGCTTATCCCCACCACAGAACGCAGACTGTTaGTGTAGTAACAGAGGAGAAACTCATCTTCAGTGG +
Preference number: 3 (lower is better)
Translates to: RVCLSPPQNADC*CSNRGETHLQW
Trigger: CCACTGAAGATGAGTTTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTGTGGTGGGGATAAGCAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
3UTR-3UTR CAA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGCCTGGCAGGACTACTaGGGCAAGACTAGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESAWQDY*GKTRRG
Trigger: CCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR GCA 72 bp TATGAGATGCCAAGACTCCTGGAATCCAGCACTGCTTaGACCAGTCTATGTAGCCTGTACAAATGTGAGCAT +
Preference number: 3 (lower is better)
Translates to: YEMPRLLESSTA*TSLCSLYKCEH
Trigger: ATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR-3UTR CAA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCATCCTCCAAAATGTCTaGAGCTGGTTCTCCCTTCTG +
Preference number: 3 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESILQNV*SWFSLL
Trigger: CAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGAT...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CGGGGCCAGCACAGGGCTGCCGCTTCAGCCTCCACAGGATGCGATCGGTCCATGCGGACATGGGAGACCTaGGCCTCCTGCCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: RGQHRAAASASTGCDRSMRTWET*ASCLSA
Trigger: GGCCGAAAGGCAGGAGGCTCAGGTCTCCCATGTCCG...CATGGACCGATCGCATCCTGTGGAGGCTGAAGCGGCAGCCCTGTGCTGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGTTCAGGGGGCCAGGCTaGGCCCCCAGCACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRFRGPG*APSTPG
Trigger: GCCGGGAGTGCTGGGGGCCCAGCCTGGCCCCCTGAA...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GAGAAGTGTGACGCCGGCGGTATGGGAGTGTCGGGGCCAGCACAGGGCTGCCGCGGTTCAGGTTGTCGCTaGAGGAGACCTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: EKCDAGGMGVSGPAQGCRGSGCR*RRPCCP
Trigger: GGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACC...GCGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCGCCGGCGTCACACTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQASASS*PPSSPR
Trigger: GCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGC...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGTAGGCGGCCCTCCTaGAACTCCCGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRSRRPS*NSRSSG
Trigger: CCCGCTGCTCCGGGAGTTCCAGGAGGGCCGCCTACT...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCTTCAGGGGGCCAGGCTaGGCCCCCAGCACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGAFRGPG*APSTPG
Trigger: GCCGGGAGTGCTGGGGGCCCAGCCTGGCCCCCTGAA...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GAGAAGTGTGACGCCGGCGGTATGGGAGTGTCGGGGCCAGCACAGGGCTGCCGCTTGGCAATGCTGAGCTaGTCCTTCTCCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: EKCDAGGMGVSGPAQGCRLAMLS*SFSHRP
Trigger: TGGCCTGTGGGAGAAGGACCAGCTCAGCATTGCCAA...GCGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCGCCGGCGTCACACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAAGTAGGCGGCCCTCCTaGAACTCCCGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGSRRPS*NSRSSG
Trigger: CCCGCTGCTCCGGGAGTTCCAGGAGGGCCGCCTACT...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGTGACGCCGGCGGTATaGGAGTGTCGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGVTPAV*ECRGQH
Trigger: GTGCTGGCCCCGACACTCCCATACCGCCGGCGTCAC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPASASS*PPSSPR
Trigger: GCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: DVSPLTILHLQDPVKVLQASASS*PPSSPR
Trigger: GCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGC...CTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350761.9
ENST00000573790.5
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRALASA*DSLPSW
Trigger: CCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGC...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACTTCAGGGGGCCAGGCTaGGCCCCCAGCACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDFRGPG*APSTPG
Trigger: GCCGGGAGTGCTGGGGGCCCAGCCTGGCCCCCTGAA...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGGGGGCCCCTCCATTCTaGCCACTGAGTCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRGAPPF*PLSQTA
Trigger: AGCAGTCTGACTCAGTGGGCAGAATGGAGGGGCCCC...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCGTCGTCCCCGCGCGGTaGTCCGGCAGGTTCGCGTCT +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAVVPAR*SGRFAS
Trigger: AGACGCGAACCTGCCGGACCACCGCGCGGGGACGAC...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGASASS*PPSSPR
Trigger: GCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGC...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGGAGCCAGGCGGGATCTaGAAGGGTCTGCTTATCCCC +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPREPGGI*KGLLIP
Trigger: GGGGATAAGCAGACCCTTCCAGATCCCGCCTGGCTC...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCACGGTCCACAGGTCCTCGGGCATCAGGACGATCAGCGGAGCAGACACCAATGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: STVHRSSGIRTISGADTNALASA*DSLPSW
Trigger: CCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGC...ATTGGTGTCTGCTCCGCTGATCGTCCTGATGCCCGAGGACCTGTGGACCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGTTCAGGGGGCCAGGCTaGGCCCCCAGCACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGFRGPG*APSTPG
Trigger: GCCGGGAGTGCTGGGGGCCCAGCCTGGCCCCCTGAA...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGGGCAGGGTGGAGGCATaGGACTCAAGCTACCAACGG +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRGRVEA*DSSYQR
Trigger: CCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCC...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGCCCTCCCAGACAGCCTaGGGCCCAGGACGGCACGAC +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGPSQTA*GPGRHD
Trigger: GTCGTGCCGTCCTGGGCCTCAGGCTGTCTGGGAGGG...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACGTTCCAAGTCACGACGTGTCAGCAGCTGGAGATCTaGGCCTCCTGCCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SLRSRGGAAEATFQVTTCQQLEI*ASCLSA
Trigger: GGCCGAAAGGCAGGAGGCTCAGATCTCCAGCTGCTG...ACACGTCGTGACTTGGAACGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR GCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCCGGGATCTGGGTGGTaGGGTTCGCAGAAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWPGSGW*GSQKEA
Trigger: CGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGG...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR GCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTCGCTGCAGGAGACCTTaGTGTCCCCGACCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPRCRRP*CPRPRH
Trigger: ATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCG...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACTGTGCTTCACCCAGTaGGTCCTCCCTCAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGLCFTQ*VLPQGA
Trigger: GGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACAGGCCTGTGCCAAATaGGGCATGTGCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGQACAK*GMCLAG
Trigger: TCCTGCCAGGCACATGCCCCATTTGGCACAGGCCTG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGCCTCAGATGGCAGGGTaGAGGCATGGGACTCAAGCT +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRPQMAG*RHGTQA
Trigger: AGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
3UTR CAA 72 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTaGGCTGTCTCTTCAGGGGGCCAGGCTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRH*AVSSGGQAGPP
Trigger: TGGGGGCCCAGCCTGGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
3UTR CAA 72 bp CCCTCCTGGAACTCCCGGAGCAGCGGGTCATGTTTCTaGGCAATGCTGAGCTGGTCCTTCTCCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSWNSRSSGSCF*AMLSWSFSHRP
Trigger: TGGCCTGTGGGAGAAGGACCAGCTCAGCATTGCCAAGAAACATGACCCGCTGCTCCGGGAGTTCCAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGATCAGCCTCCACAGGATaGGATCGGTCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGSASTG*DRSMQA
Trigger: AGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGA...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGCTCCAAGTCGAACGTaGCGGAGACAGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGAPSRT*RRQACG
Trigger: ACCACAAGCCTGTCTCCGGCACGTTCGACTTGGAGC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GCACAGGGCTGCCGCTTCAGCCTCCACAGGATGCGATCGGTCCATGCAGGCTTGGGATCTGGAAGGGTCTaGTTATCCCCACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: AQGCRFSLHRMRSVHAGLGSGRV*LSPPQN
Trigger: GTTCTGTGGTGGGGATAAGCAGACCCTTCCAGATCC...CAAGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGAAGCGGCAGCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCCATGGCGGAGGCAAGTaGTGGATGTGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFHGGGK*WMWGQA
Trigger: GGCCTGTCCCCACATCCAGCACTTGCCTCCGCCATG...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGGGCAAATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGAGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RANADTWQRPVRGSPAYGASASS*PPSSPR
Trigger: GCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGC...TCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445774.2
CDS-3UTR CCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGGTGACGCCGGCGGTATaGGAGTGTCGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLVTPAV*ECRGQH
Trigger: GTGCTGGCCCCGACACTCCCATACCGCCGGCGTCAC...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCAGTCCCACGGGCTGCTaGGGAAGTCCGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGASPTGC*GSPRLK
Trigger: CTTCAACCTCGGACTTCCCCAGCAGCCCGTGGGACT...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCCATGGCGTAAGAGCCTaGCTAGAGGGGCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGAHGVRA*LEGPLH
Trigger: ATGGAGGGGCCCCTCTAGCCAGGCTCTTACGCCATG...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGGTCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACGTTCCAAGTCACGACGAGTACCTGCAGCAGCTaGAGATCTGAGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RSLRSRGGAAEATFQVTTSTCSS*RSEPPA
Trigger: GGCAGGAGGCTCAGATCTCCAGCTGCTGCAGGTACT...CGTCGTGACTTGGAACGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR TCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGCAGGCTTGTGGTCGCTaGTGCCGTACGTCATGTGGC +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQQACGR*CRTSCG
Trigger: GCCACATGACGTACGGCATCAGCGACCACAAGCCTG...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTCCCTCCCAGACAGCCTaGGGCCCAGGACGGCACGAC +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAPSQTA*GPGRHD
Trigger: GTCGTGCCGTCCTGGGCCTCAGGCTGTCTGGGAGGG...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACACGGGGACAAGCTATaGGATGCCAAGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGHGDKL*DAKTPG
Trigger: TCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCAAAAGGGCTGCCGAGTaGCCATGGCGGAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFKRAAE*PWRRQV
Trigger: CACTTGCCTCCGCCATGGTCACTCGGCAGCCCTTTT...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGTCCTAGGCACACGATaGGGAGTACCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPVLGTR*GVPAAA
Trigger: AGCTGCTGCAGGTACTCCTCATCGTGTGCCTAGGAC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406424.8
CDS-3UTR GCA 90 bp GTTCAGGTTGTCGCTGCAGGAGACCTTGCTGTCCCCGACCCAGGCATAGGACACCGTACGTCATGTGGCTaGTGTAGCCCCTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VQVVAAGDLAVPDPGIGHRTSCG*CSPSET
Trigger: TGTCTCTGAGGGGCTACAGCAGCCACATGACGTACG...GTGTCCTATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGACAACCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTCCAGTCCCACGGGCTaGTGGGGAAGTCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLSSPTG*WGSPRL
Trigger: CAACCTCGGACTTCCCCAGCAGCCCGTGGGACTGGA...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTACGCTGCAGGAGACCTTaGTGTCCCCGACCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLRCRRP*CPRPRH
Trigger: ATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCG...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCGGTTCAGGTTGTCGCTaGAGGAGACCTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGAGSGCR*RRPCCP
Trigger: GGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACC...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGTTCAGGTTGTCGCTaGAGGAGACCTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPGSGCR*RRPCCP
Trigger: GGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCGCCAAATGGGGCATGTaGCTGGCAGGACTACTTGGG +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGAAKWGM*LAGLLG
Trigger: CCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGC...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGCAGACGCACCTCACCTaGCAAGGACCACCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQQTHLT*QGPPWK
Trigger: TTTCCAGGGTGGTCCTTGGCAGGTGAGGTGCGTCTG...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAAGCGCACCCCGGGATCTaGGTGGTGCGGTTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKAHPGI*VVRFAE
Trigger: TTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGC...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCCCGGAGACAGGCTTGTaGTCGCTGATGCCGTACGTC +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFPETGL*SLMPYV
Trigger: GACGTACGGCATCAGCGACCACAAGCCTGTCTCCGG...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTGTGCTTCACCCAGTaGGTCCTCCCTCAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWLCFTQ*VLPQGA
Trigger: GGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAG...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCCCTGGCTCAGATCTGTaGCTGTGCTTCACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGAPGSDL*LCFTQW
Trigger: CCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGG...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCCGACCCAGGCATAGGACACGTAGTCATTAACGTCCCGCAGCCCCACCTTGTACCTGGCTCAGATCTGTaGCTGTGCTTCACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PDPGIGHVVINVPQPHLVPGSDL*LCFTQW
Trigger: CCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGG...TACAAGGTGGGGCTGCGGGACGTTAATGACTACGTGTCCTATGCCTGGGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp TCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGCTGGCTGCCAGCTCTaGCCTCCGCCTGGGATTCAC +
Preference number: 4 (lower is better)
Translates to: SPGSGQSAPAAGNCWKCGAGCQL*PPPGIH
Trigger: GTGAATCCCAGGCGGAGGCCAGAGCTGGCAGCCAGC...CCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCATGGCGTAAGAGCCTaGCTAGAGGGGCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWHGVRA*LEGPLH
Trigger: ATGGAGGGGCCCCTCTAGCCAGGCTCTTACGCCATG...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGCAACGGAAGCGAACCTaGATCCTTCCCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRQRKRT*ILPSSL
Trigger: GAGAGAACTGGGAAGGATCCAGGTTCGCTTCCGTTG...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACCCTGGAAAAGTCTGTaGCCACAGCTCCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGPWKSL*PQLLDH
Trigger: GTGGTCAAGGAGCTGTGGCCACAGACTTTTCCAGGG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGATGCCAAGGACCACCCTaGAAAAGTCTGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGCQGPP*KSLWPQ
Trigger: CTGTGGCCACAGACTTTTCCAGGGTGGTCCTTGGCA...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCGCTGAAGCAGGTCACTaGGATCTAGAGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAAEAGH*DLEGAL
Trigger: CAGCGCCCCCTCTAGATCTCAGTGACCTGCTTCAGC...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCGCTTCAGGCAGATGTTaGCTCCACCTTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGAASGRC*LHLCSP
Trigger: GGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGC...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CTCCCATCCTGGCTCAGATCTGTGGCTGTGCTTCACCCAGTGGGTCCTCCCTCAGTTTCTTGGCAATGCTaGGCTGGTCCTTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: LPSWLRSVAVLHPVGPPSVSWQC*AGPSPT
Trigger: TGTGGGAGAAGGACCAGCTCAGCATTGCCAAGAAAC...TGAGGGAGGACCCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGGATGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR TCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGTTTCTTGGCAATGCTaGGCTGGTCCTTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGVSWQC*AGPSPT
Trigger: TGTGGGAGAAGGACCAGCTCAGCATTGCCAAGAAAC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCAGACAAGGAGAAGTGTaGCGCCGGCGGTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFRQGEV*RRRYGS
Trigger: ACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCT...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACGTGGCCACAGCTCCTTaGCCACTTGTCACCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDVATAP*PLVTPS
Trigger: GGAAGGGGTGACAAGTGGTCAAGGAGCTGTGGCCAC...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCGTCGTCAATGGCTCCTaGCAAGGGTGGCACAGACGC +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAVVNGS*QGWHRR
Trigger: GCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGAC...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTCTAGAGGGTGTTCTCTaGAGAACCCCAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPLEGVL*RTPGPD
Trigger: ATCTGGCCCTGGGGTTCTTCAGAGAACACCCTCTAG...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTATGGCAGGACAAGCACTaGGCAGGCTCCCAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLWQDKH*AGSQRC
Trigger: ACACCTCTGGGAGCCTGCTCAGTGCTTGTCCTGCCA...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGCGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 4 (lower is better)
Translates to: SPLTILHLQDPVKVLQPLRPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...CAGCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR GCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCGCTCCAAGTCGAACGTaGCGGAGACAGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFAPSRT*RRQACG
Trigger: ACCACAAGCCTGTCTCCGGCACGTTCGACTTGGAGC...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTTCAGATCTGTGGCTGTaGTTCACCCAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: APHNSASPGSGQSAPAAGSDLWL*FTQWVL
Trigger: GAGGACCCACTGGGTGAAGCACAGCCACAGATCTGA...ACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCTCAGATCTGTGGCTGTaGTTCACCCAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGASDLWL*FTQWVL
Trigger: GAGGACCCACTGGGTGAAGCACAGCCACAGATCTGA...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTTCAGATCTGTGGCTGTaGTTCACCCAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPSDLWL*FTQWVL
Trigger: GAGGACCCACTGGGTGAAGCACAGCCACAGATCTGA...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCGCCAAATGGGGCATGTaGCTGGCAGGACTACTTGGG +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFAKWGM*LAGLLG
Trigger: CCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGC...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCACGGCACGACAAGAATaGAGGCCTGTGCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGATARQE*RPVPNG
Trigger: CCCATTTGGCACAGGCCTGCATTCTTGTCGTGCCGT...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGGATCTGGAACTTCCATaGAGTCAGACTCCATGCCGT +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRDLELP*SQTPCR
Trigger: ACGGCATGGAGTCTGACTGCATGGAAGTTCCAGATC...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTATCCTGGGAAAAGGGCTaGCGAGTGACCATGGCGGAG +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLSWEKG*RVTMAE
Trigger: CTCCGCCATGGTCACTCGGCAGCCCTTTTCCCAGGA...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGGTCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACGTTCCAAGTCACGACGCTTGGCCTCTCAAAGTaGTGGGATTGTAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: RSLRSRGGAAEATFQVTTLGLSK*WDCRRE
Trigger: CTCACGCCTACAATCCCAGCACTTTGAGAGGCCAAG...CGTCGTGACTTGGAACGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGACCCCGGGATCTGGGTaGTGCGGTTCGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGTPGSG*CGSQKE
Trigger: CTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGT...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CCA 90 bp GCCCGGCCAAGCATTCCAATAACATATATGTCAAGATTGAGGTTCCGGTTGTTCGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ARPSIPITYMSRLRFRLFASASS*PPSSPR
Trigger: GCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGC...GAACAACCGGAACCTCAATCTTGACATATATGTTATTGGAATGCTTGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR CCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQVVQDV*DVSPLT
Trigger: TGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTGGCAATGCTGAGCTaGTCCTTCTCCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQLAMLS*SFSHRP
Trigger: TGGCCTGTGGGAGAAGGACCAGCTCAGCATTGCCAA...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGATATCAAACTTGTAGGTaGGCGGGAAGAGTAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGYQTCR*AGRVGG
Trigger: GCCGCCTACTCTTCCCGCCCACCTACAAGTTTGATA...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTGTGACGCCGGCGGTATaGGAGTGTCGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAVTPAV*ECRGQH
Trigger: GTGCTGGCCCCGACACTCCCATACCGCCGGCGTCAC...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCAGTCCCACGGGCTGCTaGGGAAGTCCGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLSPTGC*GSPRLK
Trigger: CTTCAACCTCGGACTTCCCCAGCAGCCCGTGGGACT...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGTCCCACGGGCTGCTaGGGAAGTCCGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPSPTGC*GSPRLK
Trigger: CTTCAACCTCGGACTTCCCCAGCAGCCCGTGGGACT...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTACTGTGCTTCACCCAGTaGGTCCTCCCTCAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLLCFTQ*VLPQGA
Trigger: GGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAG...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCGTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGCTGTGCTTCACCCAGTaGGTCCTCCCTCAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SWSRMFGMSRPSQFCISRLCFTQ*VLPQGA
Trigger: GGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAG...CCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTTATGTGGACGACACTTaGCTGTCTCTTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPYVDDT*LSLQGA
Trigger: GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATA...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACCATGGCGTAAGAGCCTaGCTAGAGGGGCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDHGVRA*LEGPLH
Trigger: ATGGAGGGGCCCCTCTAGCCAGGCTCTTACGCCATG...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGGCAGGGTGGAGGCATaGGACTCAAGCTACCAACGG +
Preference number: 4 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPGRVEA*DSSYQR
Trigger: CCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGCGGAAAGGAGGCTTATaGTCCCAGAGTTCAATTCCT +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRRKGGL*SQSSIP
Trigger: AGGAATTGAACTCTGGGATCATAAGCCTCCTTTCCG...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGGGGAAAGCACATCCATaGGGAAACTGCTCCACGAGT +
Preference number: 4 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQGKAHP*GNCSTS
Trigger: ACTCGTGGAGCAGTTTCCTCATGGATGTGCTTTCCC...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGGCTTCAGGCAGATGTTaGCTCCACCTTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQASGRC*LHLCSP
Trigger: GGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGC...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGTTTCTTGGCAATGCTaGGCTGGTCCTTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPVSWQC*AGPSPT
Trigger: TGTGGGAGAAGGACCAGCTCAGCATTGCCAAGAAAC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAAGACAAGGAGAAGTGTaGCGCCGGCGGTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLRQGEV*RRRYGS
Trigger: ACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCT...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp ACGCTAATAATTACCCCTGCACAATGTAACAGTCACAAAACAGCCAGCCATGGCCCCTCCCAGACAGCCTaGGGCCCAGGACGGCACGAC +
Preference number: 4 (lower is better)
Translates to: TLIITPAQCNSHKTASHGPSQTA*GPGRHD
Trigger: GTCGTGCCGTCCTGGGCCTCAGGCTGTCTGGGAGGG...GCCATGGCTGGCTGTTTTGTGACTGTTACATTGTGCAGGGGTAATTATTAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421807.7
CDS-3UTR TCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGTCAGACTGCTTTTGCTaGAAGCAGAAATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRSDCFC*KQKSQT
Trigger: GGTCTGGGATTTCTGCTTTCAGCAAAAGCAGTCTGA...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCCCGGGATCTGGGTGGTaGGGTTCGCAGAAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSPGSGW*GSQKEA
Trigger: CGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGG...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR GCA 90 bp GATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGTCAGCCTCCACAGGATaGGATCGGTCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DVSPLTILHLQDPVKVLQSASTG*DRSMQA
Trigger: AGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGA...CTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCATCAGCCTCCACAGGATaGGATCGGTCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPSASTG*DRSMQA
Trigger: AGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGA...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCGTACGTCATGTGGCTaGTGTAGCCCCTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWRTSCG*CSPSET
Trigger: TGTCTCTGAGGGGCTACAGCAGCCACATGACGTACG...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAGGTTCAGGTTGTCGCTaGAGGAGACCTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLGSGCR*RRPCCP
Trigger: GGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACC...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCGCCAAATGGGGCATGTaGCTGGCAGGACTACTTGGG +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAAKWGM*LAGLLG
Trigger: CCCAAGTAGTCCTGCCAGGCACATGCCCCATTTGGC...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTAAGAATGCAGGCCTGTaGCAAATGGGGCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPKNAGL*QMGHVP
Trigger: AGGCACATGCCCCATTTGGCACAGGCCTGCATTCTT...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCAAGAATGCAGGCCTGTaGCAAATGGGGCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGAKNAGL*QMGHVP
Trigger: AGGCACATGCCCCATTTGGCACAGGCCTGCATTCTT...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGAATCCAGCACTGCTTaGACCAGTCTATGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGESSTA*TSLCSL
Trigger: CAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACCAGACGCACCTCACCTaGCAAGGACCACCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDQTHLT*QGPPWK
Trigger: TTTCCAGGGTGGTCCTTGGCAGGTGAGGTGCGTCTG...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCCAGACGCACCTCACCTaGCAAGGACCACCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAQTHLT*QGPPWK
Trigger: TTTCCAGGGTGGTCCTTGGCAGGTGAGGTGCGTCTG...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCCAGGCGGGATCTGGAAGGGTCTGCTTATCCCCACCACAGAACGCAGACTGTATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: SQAGSGRVCLSPPQNADCMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...ACAGTCTGCGTTCTGTGGTGGGGATAAGCAGACCCTTCCAGATCCCGCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQVVQDV*DVSPLT
Trigger: TGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGCAGATAATGAGGTCGTaGTCCAGGATGTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: PSSMAPDKGGTDAPHLPRQIMRS*SRMFGM
Trigger: CATCCCAAACATCCTGGACCACGACCTCATTATCTG...CCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGTTGGCAATGCTGAGCTaGTCCTTCTCCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWLAMLS*SFSHRP
Trigger: TGGCCTGTGGGAGAAGGACCAGCTCAGCATTGCCAA...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGCCGGAGACAGGCTTGTaGTCGCTGATGCCGTACGTC +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGPETGL*SLMPYV
Trigger: GACGTACGGCATCAGCGACCACAAGCCTGTCTCCGG...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTCGGAGCAGACACCAATaGCTTCAGCTCCAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPRSRHQ*LQLQVE
Trigger: TTCGACTTGGAGCTGAAGCCATTGGTGTCTGCTCCG...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCCGGAGCAGACACCAATaGCTTCAGCTCCAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGARSRHQ*LQLQVE
Trigger: TTCGACTTGGAGCTGAAGCCATTGGTGTCTGCTCCG...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCCCTGGCTCAGATCTGTaGCTGTGCTTCACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAPGSDL*LCFTQW
Trigger: CCACTGGGTGAAGCACAGCCACAGATCTGAGCCAGG...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCGCTGGCTGCCAGCTCTaGCCTCCGCCTGGGATTCAC +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSAGCQL*PPPGIH
Trigger: GTGAATCCCAGGCGGAGGCCAGAGCTGGCAGCCAGC...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGGGGGCCCGTCGTCAATaGCTCCTGACAAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQGARRQ*LLTRVA
Trigger: TGCCACCCTTGTCAGGAGCCATTGACGACGGGCCCC...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGGGGAAAGCACATCCATaGGGAAACTGCTCCACGAGT +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWGKAHP*GNCSTS
Trigger: ACTCGTGGAGCAGTTTCCTCATGGATGTGCTTTCCC...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCTTCAGGCAGATGTTaGCTCCACCTTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GCLAPHNSASPGSGQSAPASGRC*LHLCSP
Trigger: GGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGC...TGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR TCA 90 bp GTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATAGACAAGGAGAAGTGTaGCGCCGGCGGTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: VVQDVWDVSPLTILHLQDRQGEV*RRRYGS
Trigger: ACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCT...ATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR TCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAAAGACAAGGAGAAGTGTaGCGCCGGCGGTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKRQGEV*RRRYGS
Trigger: ACTCCCATACCGCCGGCGTCACACTTCTCCTTGTCT...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGCAGGCTTGTGGTCGCTaGTGCCGTACGTCATGTGGC +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQQACGR*CRTSCG
Trigger: GCCACATGACGTACGGCATCAGCGACCACAAGCCTG...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGGTCGTCAATGGCTCCTaGCAAGGGTGGCACAGACGC +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQVVNGS*QGWHRR
Trigger: GCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGAC...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCCTAGAGGGTGTTCTCTaGAGAACCCCAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLLEGVL*RTPGPD
Trigger: ATCTGGCCCTGGGGTTCTTCAGAGAACACCCTCTAG...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGTGGCAGGACAAGCACTaGGCAGGCTCCCAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQWQDKH*AGSQRC
Trigger: ACACCTCTGGGAGCCTGCTCAGTGCTTGTCCTGCCA...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCCGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSARPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCACGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GCLAPHNSASPGSGQSAPRPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...TGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR GCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGATTCCCGAACAAAGTaGAACCCAAAGTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGDSRTK*NPKSSI
Trigger: GATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGTCAGCCTCCACAGGATaGGATCGGTCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLSASTG*DRSMQA
Trigger: AGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGA...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCACGTACGTCATGTGGCTaGTGTAGCCCCTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPRTSCG*CSPSET
Trigger: TGTCTCTGAGGGGCTACAGCAGCCACATGACGTACG...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCTCCAGTCCCACGGGCTaGTGGGGAAGTCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSSSPTG*WGSPRL
Trigger: CAACCTCGGACTTCCCCAGCAGCCCGTGGGACTGGA...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGGGATCTGGAAGGGTCTaGTTATCCCCACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQGSGRV*LSPPQN
Trigger: GTTCTGTGGTGGGGATAAGCAGACCCTTCCAGATCC...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTCAGATCTGTGGCTGTaGTTCACCCAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLSDLWL*FTQWVL
Trigger: GAGGACCCACTGGGTGAAGCACAGCCACAGATCTGA...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACAAATCCCAGACCCTCTaGTCACTCCTCACGGGGACA +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDKSQTL*SLLTGT
Trigger: TGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTT...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGATCTGGAACTTCCATaGAGTCAGACTCCATGCCGT +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPDLELP*SQTPCR
Trigger: ACGGCATGGAGTCTGACTGCATGGAAGTTCCAGATC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTCATGGCGGAGGCAAGTaGTGGATGTGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAHGGGK*WMWGQA
Trigger: GGCCTGTCCCCACATCCAGCACTTGCCTCCGCCATG...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: QSAPAAGNCWKCGEAGGSVVQDV*DVSPLT
Trigger: TGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC...ACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CCA 90 bp GGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: GCLAPHNSASPGSGQSAPVVQDV*DVSPLT
Trigger: TGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC...TGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CCA 90 bp ATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAAGTAGGCGGCCCTCCTaGAACTCCCGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: IPEQSATQSPRSESSCLQSRRPS*NSRSSG
Trigger: CCCGCTGCTCCGGGAGTTCCAGGAGGGCCGCCTACT...TTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGCGGAGCAGACACCAATaGCTTCAGCTCCAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQRSRHQ*LQLQVE
Trigger: TTCGACTTGGAGCTGAAGCCATTGGTGTCTGCTCCG...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGGAGCCAGGCGGGATCTaGAAGGGTCTGCTTATCCCC +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQEPGGI*KGLLIP
Trigger: GGGGATAAGCAGACCCTTCCAGATCCCGCCTGGCTC...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGGATTCACTCCCATCCTaGCTCAGATCTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQDSLPS*LRSVAV
Trigger: CACAGCCACAGATCTGAGCCAGGATGGGAGTGAATC...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTATGTGGACGACACTTaGCTGTCTCTTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLYVDDT*LSLQGA
Trigger: GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATA...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAGGAGGAAGGTTGTGCTaGCCGAAGGACCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLGGRLC*PKDPHQ
Trigger: TTGATGAGGGTCCTTCGGCCAGCACAACCTTCCTCC...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGACTCTCTGTCAGGATCTaGAACTTCCATGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGLSVRI*NFHAVR
Trigger: TCTGACTGCATGGAAGTTCCAGATCCTGACAGAGAG...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGGGCAGGGTGGAGGCATaGGACTCAAGCTACCAACGG +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQGRVEA*DSSYQR
Trigger: CCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCC...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGCCTCAGATGGCAGGGTaGAGGCATGGGACTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGPQMAG*RHGTQA
Trigger: AGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGCCTCAGATGGCAGGGTaGAGGCATGGGACTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLPQMAG*RHGTQA
Trigger: AGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTACCCTGGAAAAGTCTGTaGCCACAGCTCCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLPWKSL*PQLLDH
Trigger: GTGGTCAAGGAGCTGTGGCCACAGACTTTTCCAGGG...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCTGCCAAGGACCACCCTaGAAAAGTCTGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSACQGPP*KSLWPQ
Trigger: CTGTGGCCACAGACTTTTCCAGGGTGGTCCTTGGCA...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGGCAACACAGAGCAACTaGAGTAACCCTCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQATQSN*SNPQSQ
Trigger: CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGC...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCGCAACACAGAGCAACTaGAGTAACCCTCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFATQSN*SNPQSQ
Trigger: CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGC...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CTTCAGGCAGATGTTGACTCCACCTTTGTTCCCCCAGTACCCAAACAGGCCAGTGGCCAGGCTCACTCGTaGTCCAGGATGTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: LQADVDSTFVPPVPKQASGQAHS*SRMFGM
Trigger: CATCCCAAACATCCTGGACCACGAGTGAGCCTGGCC...ACTGGCCTGTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576646.7
CDS-3UTR TCA 90 bp AGGCTCACTCGTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCAGGGAAAGCACATCCATaGGGAAACTGCTCCACGAGT +
Preference number: 4 (lower is better)
Translates to: RLTRGPGCLGCLAPHNSAGKAHP*GNCSTS
Trigger: ACTCGTGGAGCAGTTTCCTCATGGATGTGCTTTCCC...TGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576646.7
CDS-3UTR TCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGCTTCAGGCAGATGTTaGCTCCACCTTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGASGRC*LHLCSP
Trigger: GGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGC...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CTTCAGGCAGATGTTGACTCCACCTTTGTTCCCCCAGTACCCAAACAGGCCAGTGCTTCAGGCAGATGTTaGCTCCACCTTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LQADVDSTFVPPVPKQASASGRC*LHLCSP
Trigger: GGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGC...ACTGGCCTGTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576646.7
CDS-3UTR TCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACGTTTCTTGGCAATGCTaGGCTGGTCCTTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDVSWQC*AGPSPT
Trigger: TGTGGGAGAAGGACCAGCTCAGCATTGCCAAGAAAC...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCGGGGAAGTCCGAGGTTaGAGAGTAGCTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAGEVRG*RVADHH
Trigger: ATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCC...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGCCAGGTCTTCACTGTTaGCACACTAGCTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQPGLHC*HTSWFH
Trigger: GTGAAACCAGCTAGTGTGTCAACAGTGAAGACCTGG...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCGTAGGAATCCAGAAATaGGACGCAGAACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFVGIQK*DAELSP
Trigger: TGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTAC...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAACACGGGGACAAGCTATaGGATGCCAAGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKHGDKL*DAKTPG
Trigger: TCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTG...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGCACGGGGACAAGCTATaGGATGCCAAGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGHGDKL*DAKTPG
Trigger: TCCAGGAGTCTTGGCATCTCATAGCTTGTCCCCGTG...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTACTCCATTCTGCCCACTaGGTCAGACTGCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLLHSAH*VRLLLL
Trigger: CAGCAAAAGCAGTCTGACTCAGTGGGCAGAATGGAG...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCGTGGCCACAGCTCCTTaGCCACTTGTCACCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSVATAP*PLVTPS
Trigger: GGAAGGGGTGACAAGTGGTCAAGGAGCTGTGGCCAC...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTGTCGTCAATGGCTCCTaGCAAGGGTGGCACAGACGC +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAVVNGS*QGWHRR
Trigger: GCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGAC...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTAAAAGGGCTGCCGAGTaGCCATGGCGGAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAKRAAE*PWRRQV
Trigger: CACTTGCCTCCGCCATGGTCACTCGGCAGCCCTTTT...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCAAAAGGGCTGCCGAGTaGCCATGGCGGAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSKRAAE*PWRRQV
Trigger: CACTTGCCTCCGCCATGGTCACTCGGCAGCCCTTTT...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAAGTAAGAGGATCCCCTaGATACGGACATGGGAGACC +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLSKRIP*IRTWET
Trigger: GGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACT...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTAGTAAGAGGATCCCCTaGATACGGACATGGGAGACC +
Preference number: 4 (lower is better)
Translates to: QSAPAAGNCWKCGEAGGSSKRIP*IRTWET
Trigger: GGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACT...ACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR GCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAACGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKRPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HTQACGGEYATQSNWSNPRPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTGATTCCCGAACAAAGTaGAACCCAAAGTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: APHNSASPGSGQSAPAAGDSRTK*NPKSSI
Trigger: GATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC...ACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR GCA 90 bp GATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCATCCAGTCCCACGGGCTaGTGGGGAAGTCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: DSRTKCNPKSSIRKFMSPSSPTG*WGSPRL
Trigger: CAACCTCGGACTTCCCCAGCAGCCCGTGGGACTGGA...TGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGGATCTGGAAGGGTCTaGTTATCCCCACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPGSGRV*LSPPQN
Trigger: GTTCTGTGGTGGGGATAAGCAGACCCTTCCAGATCC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGAAATCCCAGACCCTCTaGTCACTCCTCACGGGGACA +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLKSQTL*SLLTGT
Trigger: TGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTT...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTGGGGCCCCTCCATTCTaGCCACTGAGTCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAGAPPF*PLSQTA
Trigger: AGCAGTCTGACTCAGTGGGCAGAATGGAGGGGCCCC...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGGATCTGGAACTTCCATaGAGTCAGACTCCATGCCGT +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWDLELP*SQTPCR
Trigger: ACGGCATGGAGTCTGACTGCATGGAAGTTCCAGATC...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCTCCTGGGAAAAGGGCTaGCGAGTGACCATGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSSWEKG*RVTMAE
Trigger: CTCCGCCATGGTCACTCGGCAGCCCTTTTCCCAGGA...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTACCCTGCATACGGACATaGGAGACCTTGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLPCIRT*ETLMKL
Trigger: GAGCTTCATCAAGGTCTCCCATGTCCGTATGCAGGG...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTTGATGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLQPLVIVGNVGRQVAVDAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...ATCAACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTTTGGCAATGCTGAGCTaGTCCTTCTCCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: HTQACGGEYATQSNWSNPLAMLS*SFSHRP
Trigger: TGGCCTGTGGGAGAAGGACCAGCTCAGCATTGCCAA...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCTATCAAACTTGTAGGTaGGCGGGAAGAGTAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GPGCLGCLAPHNSASPGSYQTCR*AGRVGG
Trigger: GCCGCCTACTCTTCCCGCCCACCTACAAGTTTGATA...GGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCCCGGAGACAGGCTTGTaGTCGCTGATGCCGTACGTC +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSPETGL*SLMPYV
Trigger: GACGTACGGCATCAGCGACCACAAGCCTGTCTCCGG...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCGAGCCAGGCGGGATCTaGAAGGGTCTGCTTATCCCC +
Preference number: 4 (lower is better)
Translates to: PEQSATQSPRSESSCLQTEPGGI*KGLLIP
Trigger: GGGGATAAGCAGACCCTTCCAGATCCCGCCTGGCTC...GGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACTCTGGGAGGAGTATGTaGACGACACTTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDSGRSM*TTLGCL
Trigger: GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGA...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCCTGGCAGGACTACTTaGGCAAGACTAGAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTQACGGEYATQSNWSNPPGRTT*ARLEEG
Trigger: CCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGG...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCCAGGCCTGTGCCAAATaGGGCATGTGCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSQACAK*GMCLAG
Trigger: TCCTGCCAGGCACATGCCCCATTTGGCACAGGCCTG...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGCAAAATGTCTTGAGCTaGTTCTCCCTTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQQNVLS*FSLLPA
Trigger: GGCAGGCAGAAGGGAGAACCAGCTCAAGACATTTTG...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTAATTGTTGGGGCCAGGCTCACTCGTaGTCCAGGATGTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: NSASPGSGQSAPAAGNCWGQAHS*SRMFGM
Trigger: CATCCCAAACATCCTGGACCACGAGTGAGCCTGGCC...CCAACAATTACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
3UTR CAA 72 bp GATAATGAGGCCAGGCTCACTCGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCACAATTCTGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: DNEARLTRGPGC*GCLAPHNSASP
Trigger: TGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAGCCTGGCCTCATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR TCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCCAAATCCAAGCATCGTaGCTTAGACTAAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFQIQAS*LRLSGR
Trigger: TCGCCCACTTAGTCTAAGTCACGATGCTTGGATTTG...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR TCA 90 bp CACTCGTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: HSWSRMFGMSRPSQFCISFRLFS*SRSLRS
Trigger: AGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAA...GGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR TCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAAGGGAAAGCACATCCATaGGGAAACTGCTCCACGAGT +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKGKAHP*GNCSTS
Trigger: ACTCGTGGAGCAGTTTCCTCATGGATGTGCTTTCCC...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGGGGGAAGTCCGAGGTTaGAGAGTAGCTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLGEVRG*RVADHH
Trigger: ATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCC...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGTCAGACTGCTTTTGCTaGAAGCAGAAATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWSDCFC*KQKSQT
Trigger: GGTCTGGGATTTCTGCTTTCAGCAAAAGCAGTCTGA...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCTCAGACTGCTTTTGCTaGAAGCAGAAATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFSDCFC*KQKSQT
Trigger: GGTCTGGGATTTCTGCTTTCAGCAAAAGCAGTCTGA...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGACGGCACGACAAGAATaGAGGCCTGTGCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQTARQE*RPVPNG
Trigger: CCCATTTGGCACAGGCCTGCATTCTTGTCGTGCCGT...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSASASS*PPSSPR
Trigger: GCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGC...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAACCCTGCATACGGACATaGGAGACCTTGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKPCIRT*ETLMKL
Trigger: GAGCTTCATCAAGGTCTCCCATGTCCGTATGCAGGG...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAGCAAATGCTGATACTTaGCAAAGACCAGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGANADT*QRPVRG
Trigger: TCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTTGATGATGCTGACGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLVIVGNVGRQVAVDDADAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...GTCAGCATCATCAACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGTGACGCCGGCGGTATaGGAGTGTCGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESVTPAV*ECRGQH
Trigger: GTGCTGGCCCCGACACTCCCATACCGCCGGCGTCAC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGCGGAGCAGACACCAATaGCTTCAGCTCCAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGRSRHQ*LQLQVE
Trigger: TTCGACTTGGAGCTGAAGCCATTGGTGTCTGCTCCG...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGTCTGGGAGGAGTATGTaGACGACACTTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGSGRSM*TTLGCL
Trigger: GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGA...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGCCTGGCAGGACTACTTaGGCAAGACTAGAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQPGRTT*ARLEEG
Trigger: CCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGG...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTCTCTGTCAGGATCTaGAACTTCCATGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWLSVRI*NFHAVR
Trigger: TCTGACTGCATGGAAGTTCCAGATCCTGACAGAGAG...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGCAACGGAAGCGAACCTaGATCCTTCCCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLQRKRT*ILPSSL
Trigger: GAGAGAACTGGGAAGGATCCAGGTTCGCTTCCGTTG...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAATTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKFRLFS*SRSLRS
Trigger: AGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAA...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACGTTCCAAGTCACGACGTGTCATATATGTCAAGATTaGGGTTCCGGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLRSRGGAAEATFQVTTCHICQD*GSGCSA
Trigger: AGCTGAACAACCGGAACCTCAATCTTGACATATATG...ACACGTCGTGACTTGGAACGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR TCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACCGGAAAGGAGGCTTATaGTCCCAGAGTTCAATTCCT +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDRKGGL*SQSSIP
Trigger: AGGAATTGAACTCTGGGATCATAAGCCTCCTTTCCG...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCCGGAAAGGAGGCTTATaGTCCCAGAGTTCAATTCCT +
Preference number: 4 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLRKGGL*SQSSIP
Trigger: AGGAATTGAACTCTGGGATCATAAGCCTCCTTTCCG...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCGCTTCAGGCAGATGTTaGCTCCACCTTTGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PEQSATQSPRSESSCLQTASGRC*LHLCSP
Trigger: GGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGC...GGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR TCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGCCAGGTCTTCACTGTTaGCACACTAGCTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLPGLHC*HTSWFH
Trigger: GTGAAACCAGCTAGTGTGTCAACAGTGAAGACCTGG...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAATCCTCCAAAATGTCTTaGGCTGGTTCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKSSKMS*AGSPFC
Trigger: GCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGA...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCCTAGAGGGTGTTCTCTaGAGAACCCCAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSLEGVL*RTPGPD
Trigger: ATCTGGCCCTGGGGTTCTTCAGAGAACACCCTCTAG...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACATGGGAGACCTTGAGTAAGAGGATCCCCTaGATACGGACATGGGAGACC +
Preference number: 4 (lower is better)
Translates to: YLAKTSKRIPCIRTWETLSKRIP*IRTWET
Trigger: GGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACT...CAAGGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR GCA 90 bp GTCCTTCTCCCACAGGCCACCGTAGCACCGATTTTTAATGGATTCCCGAACAAACGCCCCTCACAATTCTaGATCTCCAGGATCCGGTCA +
Preference number: 4 (lower is better)
Translates to: VLLPQATVAPIFNGFPNKRPSQF*ISRIRS
Trigger: TGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCG...TTTGTTCGGGAATCCATTAAAAATCGGTGCTACGGTGGCCTGTGGGAGAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350761.9
ENST00000576646.7
CDS-3UTR GCA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGATTCCCGAACAAAGTaGAACCCAAAGTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPDSRTK*NPKSSI
Trigger: GATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGGAATCCAGCACTGCTTaGACCAGTCTATGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLESSTA*TSLCSL
Trigger: CAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTC...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCCATGGCGGAGGCAAGTaGTGGATGTGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTHGGGK*WMWGQA
Trigger: GGCCTGTCCCCACATCCAGCACTTGCCTCCGCCATG...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCACCCCGGGATCTGGGTaGTGCGGTTCGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTTPGSG*CGSQKE
Trigger: CTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGT...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGCGCACCCCGGGATCTaGGTGGTGCGGTTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESAHPGI*VVRFAE
Trigger: TTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CCA 90 bp CTGCTCCACGAGTCATTAAAGGCAGCATCGGAAAGGAGGCTTATGATCCCAGAGCCCTGCATACGGACATaGGAGACCTTGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LLHESLKAASERRLMIPEPCIRT*ETLMKL
Trigger: GAGCTTCATCAAGGTCTCCCATGTCCGTATGCAGGG...CTCTGGGATCATAAGCCTCCTTTCCGATGCTGCCTTTAATGACTCGTGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR CCA 90 bp GCAGACACCAATGGCTTCAGCTCCAAGTCGAACGTGCCGGAGACAGGCTTGTGGGCAAATGCTGATACTTaGCAAAGACCAGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ADTNGFSSKSNVPETGLWANADT*QRPVRG
Trigger: TCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC...CCACAAGCCTGTCTCCGGCACGTTCGACTTGGAGCTGAAGCCATTGGTGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGCAAATGCTGATACTTaGCAAAGACCAGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPANADT*QRPVRG
Trigger: TCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAVVQDV*DVSPLT
Trigger: TGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTCCTTCTCCCACAGGCCACCGTAGCACCGATTTTTAATGGATTCCCGAACAAAGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: VLLPQATVAPIFNGFPNKVVQDV*DVSPLT
Trigger: TGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC...TTTGTTCGGGAATCCATTAAAAATCGGTGCTACGGTGGCCTGTGGGAGAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350761.9
ENST00000576646.7
CDS-3UTR CCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGGATTCACTCCCATCCTaGCTCAGATCTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQDSLPS*LRSVAV
Trigger: CACAGCCACAGATCTGAGCCAGGATGGGAGTGAATC...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTAATTGATTCACTCCCATCCTaGCTCAGATCTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTILHLQDPVKVLQPLVIDSLPS*LRSVAV
Trigger: CACAGCCACAGATCTGAGCCAGGATGGGAGTGAATC...AATTACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCGCTCTGGCCTCCGCCTaGGATTCACTCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTALASA*DSLPSW
Trigger: CCAGGATGGGAGTGAATCCCAGGCGGAGGCCAGAGC...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGCTGGCTGCCAGCTCTaGCCTCCGCCTGGGATTCAC +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESAGCQL*PPPGIH
Trigger: GTGAATCCCAGGCGGAGGCCAGAGCTGGCAGCCAGC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTAATTGTTGGAAATTCTGGGAGGAGTATGTaGACGACACTTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LHLQDPVKVLQPLVIVGNSGRSM*TTLGCL
Trigger: GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGA...ATTTCCAACAATTACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTAGATGCCAAGACTCCTaGAATCCAGCACTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HTQACGGEYATQSNWSNPRCQDS*NPALLA
Trigger: TGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCT...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAAAGATGCCAAGACTCCTaGAATCCAGCACTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKRCQDS*NPALLA
Trigger: TGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCT...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTGGAGGAAGGTTGTGCTaGCCGAAGGACCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAGGRLC*PKDPHQ
Trigger: TTGATGAGGGTCCTTCGGCCAGCACAACCTTCCTCC...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCCCCTGGAAAAGTCTGTaGCCACAGCTCCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSPWKSL*PQLLDH
Trigger: GTGGTCAAGGAGCTGTGGCCACAGACTTTTCCAGGG...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCGGGGCCCGTCGTCAATaGCTCCTGACAAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTGARRQ*LLTRVA
Trigger: TGCCACCCTTGTCAGGAGCCATTGACGACGGGCCCC...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGCAAAATGTCTTGAGCTaGTTCTCCCTTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLQNVLS*FSLLPA
Trigger: GGCAGGCAGAAGGGAGAACCAGCTCAAGACATTTTG...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAGATCTTATCTCAATCTaGTTTCGGATTCCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLDLISI*FRIPGV
Trigger: AACCCCGGGAATCCGAAATCAGATTGAGATAAGATC...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR TCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGCAAATCCAAGCATCGTaGCTTAGACTAAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLQIQAS*LRLSGR
Trigger: TCGCCCACTTAGTCTAAGTCACGATGCTTGGATTTG...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR TCA 90 bp ACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATACAGGCTTGTGGTCGCTaGTGCCGTACGTCATGTGGC +
Preference number: 4 (lower is better)
Translates to: TKCNPKSSIRKFMSPNQIQACGR*CRTSCG
Trigger: GCCACATGACGTACGGCATCAGCGACCACAAGCCTG...TATCTGGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR TCA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCAGGTTGAAGAGTAGCTaGCCATCATGTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFRLKSS*PSCHFP
Trigger: TGGAAAATGACATGATGGTCAGCTACTCTTCAACCT...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CACTGGTGTCATAGTCGTTGGAGTTCCTATCAAACTTGTAGGTGGGCGGGAAGAGGGGAAGTCCGAGGTTaGAGAGTAGCTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: HWCHSRWSSYQTCRWAGRGEVRG*RVADHH
Trigger: ATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCC...TCTTCCCGCCCACCTACAAGTTTGATAGGAACTCCAACGACTATGACACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCAGTAAGAGGATCCCCTaGATACGGACATGGGAGACC +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSSKRIP*IRTWET
Trigger: GGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACT...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATAATGAGGTCGTGGTCCAGAGTAAGAGGATCCCCTaGATACGGACATGGGAGACC +
Preference number: 4 (lower is better)
Translates to: VLDPKVHVSKPDNEVVVQSKRIP*IRTWET
Trigger: GGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACT...CTGGACCACGACCTCATTATCTGGTTTGGAGACATGAACTTTCGGATCGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp CCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATAATGAGGCCAGGCAGTAAGAGGATCCCCTaGATACGGACATGGGAGACC +
Preference number: 4 (lower is better)
Translates to: PKSSIRKFMSPNQIMRPGSKRIP*IRTWET
Trigger: GGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACT...GCCTGGCCTCATTATCTGGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR GCA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGATTCCCGAACAAAGTaGAACCCAAAGTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGDSRTK*NPKSSI
Trigger: GATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGAGCTCCAAGTCGAACGTaGCGGAGACAGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: EQSATQSPRSESSCLQTRAPSRT*RRQACG
Trigger: ACCACAAGCCTGTCTCCGGCACGTTCGACTTGGAGC...TCTGGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCCGCTGCAGGAGACCTTaGTGTCCCCGACCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESRCRRP*CPRPRH
Trigger: ATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCG...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTAAGAATGCAGGCCTGTaGCAAATGGGGCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAKNAGL*QMGHVP
Trigger: AGGCACATGCCCCATTTGGCACAGGCCTGCATTCTT...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCTTGCGGGGGAGAGTATaGAACACAGAGCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSLRGRV*NTEQLE
Trigger: CTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAA...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCTCCCGGGGTTCACCATaGGATCAGGCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTSRGSP*DQADLL
Trigger: CAGGAGGTCTGCCTGATCCCATGGTGAACCCCGGGA...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTCCCTGCATACGGACATaGGAGACCTTGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAPCIRT*ETLMKL
Trigger: GAGCTTCATCAAGGTCTCCCATGTCCGTATGCAGGG...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GCCATAAAGCTTCAGGCAGATGTTGACTCCACCTTTGTTCCCCCAGTACCCAAAGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AIKLQADVDSTFVPPVPKAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...TTTGGGTACTGGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCTTTATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576646.7
CDS-3UTR CCA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTGGTGTCATAGTCGTTaGAGTTCCTATCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQWCHSR*SSYQTC
Trigger: ACAAGTTTGATAGGAACTCCAACGACTATGACACCA...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATACCGGAGACAGGCTTGTaGTCGCTGATGCCGTACGTC +
Preference number: 4 (lower is better)
Translates to: TKCNPKSSIRKFMSPNQIPETGL*SLMPYV
Trigger: GACGTACGGCATCAGCGACCACAAGCCTGTCTCCGG...TATCTGGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTTCTGGGAGGAGTATGTaGACGACACTTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLASGRSM*TTLGCL
Trigger: GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGA...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAACTCTCTGTCAGGATCTaGAACTTCCATGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKLSVRI*NFHAVR
Trigger: TCTGACTGCATGGAAGTTCCAGATCCTGACAGAGAG...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: PEQSATQSPRSESSCLQTFRLFS*SRSLRS
Trigger: AGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAA...GGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR TCA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCCATATATGTCAAGATTaGGGTTCCGGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAHICQD*GSGCSA
Trigger: AGCTGAACAACCGGAACCTCAATCTTGACATATATG...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GTGCTCCAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTTGATCATATATGTCAAGATTaGGGTTCCGGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VLQPLVIVGNVGRQVAVDHICQD*GSGCSA
Trigger: AGCTGAACAACCGGAACCTCAATCTTGACATATATG...ATCAACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR TCA 90 bp TGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCATATATGTCAAGATTaGGGTTCCGGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WDVSPLTILHLQDPVKVLHICQD*GSGCSA
Trigger: AGCTGAACAACCGGAACCTCAATCTTGACATATATG...GAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR TCA 90 bp AAGCTCAGAGGGGAAAGCACATCCATGAGGAAACTGCTCCACGAGTCATTAAAGGGGAAAGCACATCCATaGGGAAACTGCTCCACGAGT +
Preference number: 4 (lower is better)
Translates to: KLRGESTSMRKLLHESLKGKAHP*GNCSTS
Trigger: ACTCGTGGAGCAGTTTCCTCATGGATGTGCTTTCCC...CTTTAATGACTCGTGGAGCAGTTTCCTCATGGATGTGCTTTCCCCTCTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCCAGGCTTGTGGTCGCTaGTGCCGTACGTCATGTGGC +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESQACGR*CRTSCG
Trigger: GCCACATGACGTACGGCATCAGCGACCACAAGCCTG...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTGTAGGAATCCAGAAATaGGACGCAGAACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAVGIQK*DAELSP
Trigger: TGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTAC...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GACGTGTATGAGATGTCTTTAGTGGAACAGTCAGTCACAGCAGCTCTTCAAGAAGTCCTAGGCACACGATaGGGAGTACCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DVYEMSLVEQSVTAALQEVLGTR*GVPAAA
Trigger: AGCTGCTGCAGGTACTCCTCATCGTGTGCCTAGGAC...TTCTTGAAGAGCTGCTGTGACTGACTGTTCCACTAAAGACATCTCATACACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR TCA 90 bp AATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACATGGGCGGAAAGGAGGCTTATaGTCCCAGAGTTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: NADTWQRPVRGSPAYGHGRKGGL*SQSSIP
Trigger: GGGAATTGAACTCTGGGATCATAAGCCTCCTTTCCG...CCCATGTCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR GCA 90 bp CTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGCTGGTAATTGATTCCCGAACAAAGTaGAACCCAAAGTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: LTILHLQDPVKVLQPLVIDSRTK*NPKSSI
Trigger: GATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC...AATTACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR GCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGAACGCAGACTGTTaGTGTAGTAACAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HTQACGGEYATQSNWSNPQNADC*CSNRGE
Trigger: TTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTG...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGGGGCCCCTCCATTCTaGCCACTGAGTCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESGAPPF*PLSQTA
Trigger: AGCAGTCTGACTCAGTGGGCAGAATGGAGGGGCCCC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCTCCCGGGGTTCACCATaGGATCAGGCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESSRGSP*DQADLL
Trigger: CAGGAGGTCTGCCTGATCCCATGGTGAACCCCGGGA...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CCA 90 bp AAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATAATGAGGCCAGGCTCACCCTGCATACGGACATaGGAGACCTTGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: KSSIRKFMSPNQIMRPGSPCIRT*ETLMKL
Trigger: GAGCTTCATCAAGGTCTCCCATGTCCGTATGCAGGG...TGAGCCTGGCCTCATTATCTGGTTTGGAGACATGAACTTTCGGATCGAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576646.7
CDS-3UTR CCA 90 bp CTCGTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGCAAATGCTGATACTTaGCAAAGACCAGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LVVQDVWDVSPLTILHLQANADT*QRPVRG
Trigger: TCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC...CTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CCA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGTGGTGTCATAGTCGTTaGAGTTCCTATCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQWCHSR*SSYQTC
Trigger: ACAAGTTTGATAGGAACTCCAACGACTATGACACCA...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCAGTCCCACGGGCTGCTaGGGAAGTCCGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESSPTGC*GSPRLK
Trigger: CTTCAACCTCGGACTTCCCCAGCAGCCCGTGGGACT...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGAGCCAGGCGGGATCTaGAAGGGTCTGCTTATCCCC +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESEPGGI*KGLLIP
Trigger: GGGGATAAGCAGACCCTTCCAGATCCCGCCTGGCTC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCCAAAATGTCTTGAGCTaGTTCTCCCTTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSQNVLS*FSLLPA
Trigger: GGCAGGCAGAAGGGAGAACCAGCTCAAGACATTTTG...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACGAGATTCTAAGAGGATaGAGAGCAAAAGTCCGGATT +
Preference number: 4 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDEILRG*RAKVRI
Trigger: AATCCGGACTTTTGCTCTCCATCCTCTTAGAATCTC...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406424.8
CDS-3UTR TCA 90 bp GCAAATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACATTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: ANADTWQRPVRGSPAYGHFRLFS*SRSLRS
Trigger: AGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAA...ATGTCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR TCA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTAGGTTGAAGAGTAGCTaGCCATCATGTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: HTQACGGEYATQSNWSNPRLKSS*PSCHFP
Trigger: TGGAAAATGACATGATGGTCAGCTACTCTTCAACCT...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp AAACTGCTCCACGAGTCATTAAAGGCAGCATCGGAAAGGAGGCTTATGATCCCACGGAAAGGAGGCTTATaGTCCCAGAGTTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: KLLHESLKAASERRLMIPRKGGL*SQSSIP
Trigger: GGGAATTGAACTCTGGGATCATAAGCCTCCTTTCCG...TGGGATCATAAGCCTCCTTTCCGATGCTGCCTTTAATGACTCGTGGAGCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR GCA 90 bp GGATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCGATTCCCGAACAAAGTaGAACCCAAAGTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: GFPNKVQPKVLDPKVHVSDSRTK*NPKSSI
Trigger: GATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC...GGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR GCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTTCCAGTCCCACGGGCTaGTGGGGAAGTCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSSSPTG*WGSPRL
Trigger: CAACCTCGGACTTCCCCAGCAGCCCGTGGGACTGGA...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTCGCTGCAGGAGACCTTaGTGTCCCCGACCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSRCRRP*CPRPRH
Trigger: ATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCG...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCGGACAAGCTATGAGATaGCAAGACTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSGQAMR*QDSWNP
Trigger: TGGATTCCAGGAGTCTTGGCATCTCATAGCTTGTCC...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCAAATCCCAGACCCTCTaGTCACTCCTCACGGGGACA +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTKSQTL*SLLTGT
Trigger: TGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTT...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GCCCGGCCAAGCATTCCAATAACATATATGTCAAGATTGAGGTTCCGGTTGTTCACGATGAGGAGTACCTaGAGCAGCTGGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: ARPSIPITYMSRLRFRLFTMRST*SSWRSE
Trigger: CTCAGATCTCCAGCTGCTGCAGGTACTCCTCATCGT...GAACAACCGGAACCTCAATCTTGACATATATGTTATTGGAATGCTTGGCCGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR CCA 90 bp GAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGAATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: EQSATQSPRSESSCLQTRMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...TCTGGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CCA 90 bp GGATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCCAGATAATGAGGTCGTaGTCCAGGATGTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: GFPNKVQPKVLDPKVHVSQIMRS*SRMFGM
Trigger: CATCCCAAACATCCTGGACCACGACCTCATTATCTG...GGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CCA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTCAGATAATGAGGTCGTaGTCCAGGATGTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: SRNETQNCPQVFTVDTLAQIMRS*SRMFGM
Trigger: CATCCCAAACATCCTGGACCACGACCTCATTATCTG...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACGCTAATAATTACCCCTGCACAATGTAACAGTCACAAAACAGCCAGCCATGGCTATCAAACTTGTAGGTaGGCGGGAAGAGTAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TLIITPAQCNSHKTASHGYQTCR*AGRVGG
Trigger: GCCGCCTACTCTTCCCGCCCACCTACAAGTTTGATA...GCCATGGCTGGCTGTTTTGTGACTGTTACATTGTGCAGGGGTAATTATTAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421807.7
CDS-3UTR CCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGGGCCCGTCGTCAATaGCTCCTGACAAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSGARRQ*LLTRVA
Trigger: TGCCACCCTTGTCAGGAGCCATTGACGACGGGCCCC...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGCATATATGTCAAGATTaGGGTTCCGGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQHICQD*GSGCSA
Trigger: AGCTGAACAACCGGAACCTCAATCTTGACATATATG...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCGGGGAAGTCCGAGGTTaGAGAGTAGCTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTGEVRG*RVADHH
Trigger: ATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCC...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCTCAGACTCCATGCCGTaGGTAGGGAGGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESSDSMP*VGRKVV
Trigger: CACAACCTTCCTCCCTACTCACGGCATGGAGTCTGA...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCCGTACGTCATGTGGCTaGTGTAGCCCCTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESRTSCG*CSPSET
Trigger: TGTCTCTGAGGGGCTACAGCAGCCACATGACGTACG...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GCTTATCCCCACCACAGAACGCAGACTGTTGCTGTAGTAACAGAGGAGAAACTCCAGAACGCAGACTGTTaGTGTAGTAACAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AYPHHRTQTVAVVTEEKLQNADC*CSNRGE
Trigger: TTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTG...GAGTTTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTGTGGTGGGGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCGGATCTGGAAGGGTCTaGTTATCCCCACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTGSGRV*LSPPQN
Trigger: GTTCTGTGGTGGGGATAAGCAGACCCTTCCAGATCC...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCTTGCGGGGGAGAGTATaGAACACAGAGCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTLRGRV*NTEQLE
Trigger: CTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAA...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATAATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: TKCNPKSSIRKFMSPNQIMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...TATCTGGTTTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCGCCGCTGGTAATTGTTaGAAATGTGGGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTAAGNC*KCGEAG
Trigger: ACCTGCCTCCCCACATTTCCAACAATTACCAGCGGC...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCTATCAAACTTGTAGGTaGGCGGGAAGAGTAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTYQTCR*AGRVGG
Trigger: GCCGCCTACTCTTCCCGCCCACCTACAAGTTTGATA...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCTATGTGGACGACACTTaGCTGTCTCTTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESYVDDT*LSLQGA
Trigger: GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATA...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGGAGGAAGGTTGTGCTaGCCGAAGGACCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESGGRLC*PKDPHQ
Trigger: TTGATGAGGGTCCTTCGGCCAGCACAACCTTCCTCC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCAGGTTGAAGAGTAGCTaGCCATCATGTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSRLKSS*PSCHFP
Trigger: TGGAAAATGACATGATGGTCAGCTACTCTTCAACCT...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCTCCTCCAAAATGTCTTaGGCTGGTTCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTSSKMS*AGSPFC
Trigger: GCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGA...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCCCAGAGTTCAATTCCTaGAAACCAATAACATATATG +
Preference number: 4 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLPEFNS*KPITYM
Trigger: CATATATGTTATTGGTTTGCAGGAATTGAACTCTGG...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTACCAGAGTTCAATTCCTaGAAACCAATAACATATATG +
Preference number: 4 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLPEFNS*KPITYM
Trigger: CATATATGTTATTGGTTTGCAGGAATTGAACTCTGG...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp AATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACATGGGGCAAATGCTGATACTTaGCAAAGACCAGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: NADTWQRPVRGSPAYGHGANADT*QRPVRG
Trigger: TCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC...CCCATGTCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCATGTGGGGAGGCAGGTaGCAGTTGATGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESMWGGR*QLMMLT
Trigger: TGTCAGCATCATCAACTGCCACCTGCCTCCCCACAT...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCAGATGCCAAGACTCCTaGAATCCAGCACTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTRCQDS*NPALLA
Trigger: TGCAAGCAGTGCTGGATTCCAGGAGTCTTGGCATCT...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp GCAAATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACATCATATATGTCAAGATTaGGGTTCCGGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ANADTWQRPVRGSPAYGHHICQD*GSGCSA
Trigger: AGCTGAACAACCGGAACCTCAATCTTGACATATATG...ATGTCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCCCAGGTCTTCACTGTTaGCACACTAGCTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESPGLHC*HTSWFH
Trigger: GTGAAACCAGCTAGTGTGTCAACAGTGAAGACCTGG...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGTAGGAATCCAGAAATaGGACGCAGAACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESVGIQK*DAELSP
Trigger: TGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTAC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTTCAGACTCCATGCCGTaGGTAGGGAGGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSSDSMP*VGRKVV
Trigger: CACAACCTTCCTCCCTACTCACGGCATGGAGTCTGA...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGCCAGAGTTCAATTCCTaGAAACCAATAACATATATG +
Preference number: 4 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLPEFNS*KPITYM
Trigger: CATATATGTTATTGGTTTGCAGGAATTGAACTCTGG...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GCAAATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACATGCAAATGCTGATACTTaGCAAAGACCAGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ANADTWQRPVRGSPAYGHANADT*QRPVRG
Trigger: TCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC...ATGTCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCCAGATAATGAGGTCGTaGTCCAGGATGTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTQIMRS*SRMFGM
Trigger: CATCCCAAACATCCTGGACCACGACCTCATTATCTG...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp TCCTGGAATCCAGCACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCTGGTGTCATAGTCGTTaGAGTTCCTATCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: SWNPALLAPVYVACTNVSWCHSR*SSYQTC
Trigger: ACAAGTTTGATAGGAACTCCAACGACTATGACACCA...GCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CATTCCAATAACATATATGTCAAGATTGAGGTTCCGGTTGTTCAGCTGAAGCAGTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: HSNNIYVKIEVPVVQLKQFRLFS*SRSLRS
Trigger: AGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAA...CTGCTTCAGCTGAACAACCGGAACCTCAATCTTGACATATATGTTATTGGAATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS-3UTR TCA 90 bp ATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCAAAGGTTGAAGAGTAGCTaGCCATCATGTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: IPEQSATQSPRSESSCLQRLKSS*PSCHFP
Trigger: TGGAAAATGACATGATGGTCAGCTACTCTTCAACCT...TTGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR GCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCCAGAACGCAGACTGTTaGTGTAGTAACAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTQNADC*CSNRGE
Trigger: TTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTG...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGATTCACTCCCATCCTaGCTCAGATCTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSDSLPS*LRSVAV
Trigger: CACAGCCACAGATCTGAGCCAGGATGGGAGTGAATC...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGATCTTATCTCAATCTaGTTTCGGATTCCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESDLISI*FRIPGV
Trigger: AACCCCGGGAATCCGAAATCAGATTGAGATAAGATC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR TCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSFRLFS*SRSLRS
Trigger: AGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAA...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR GCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGAATCCAGCACTGCTTaGACCAGTCTATGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSESSTA*TSLCSL
Trigger: CAGGCTACATAGACTGGTGCAAGCAGTGCTGGATTC...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCGCAAATGCTGATACTTaGCAAAGACCAGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VFTVDTLAGFTHISATKTANADT*QRPVRG
Trigger: TCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGC...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp CAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTGGAGAGAGCGTATGTCTAAGAGGATaGAGAGCAAAAGTCCGGATT +
Preference number: 4 (lower is better)
Translates to: QQKPVFKRLIPEMSSGESVCLRG*RAKVRI
Trigger: AATCCGGACTTTTGCTCTCCATCCTCTTAGACATAC...GCTCTCTCCACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320345.10
CDS-3UTR GCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTCAGAACGCAGACTGTTaGTGTAGTAACAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSQNADC*CSNRGE
Trigger: TTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTG...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR TCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTCATATATGTCAAGATTaGGGTTCCGGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSHICQD*GSGCSA
Trigger: AGCTGAACAACCGGAACCTCAATCTTGACATATATG...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CCA 90 bp ACATCTCAGCAACAAAAACCTGTATTTAAGCGGCTAATTCCAGAGATGAGTAGTTGGTGTCATAGTCGTTaGAGTTCCTATCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: TSQQQKPVFKRLIPEMSSWCHSR*SSYQTC
Trigger: ACAAGTTTGATAGGAACTCCAACGACTATGACACCA...ACTACTCATCTCTGGAATTAGCCGCTTAAATACAGGTTTTTGTTGCTGAGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS CCA 90 bp CCGCTCAGCTTCCGCGAGCTCATGGCCGCCGTCGTCCCCGCGCGGTaGTCCGGCAGGTTCGCGTCTCCCGGCCAGCGGGTCCCGGCCAGA +
Preference number: 5 (lower is better)
Translates to: PLSFRELMAAVVPAR*SGRFASPGQRVPAR
Trigger: TCTGGCCGGGACCCGCTGGCCGGGAGACGCGAACCTGCCGGACCACCGCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGCTGAGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
ENST00000445774.2
ENST00000449479.5
ENST00000477910.5
ENST00000498390.5
ENST00000573790.5
ENST00000574561.1
ENST00000574955.1
ENST00000575172.5
CDS CCA 90 bp GCCCCGGCTTCCGTCAGAGACGCGCCCTCCGCGCACCCCGGGATCTaGGTGGTGCGGTTCGCAGAAGGAGGCGGGACTCTCCCACGAGCG +
Preference number: 5 (lower is better)
Translates to: APASVRDAPSAHPGI*VVRFAEGGGTLPRA
Trigger: CGCTCGTGGGAGAGTCCCGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGCGGAGGGCGCGTCTCTGACGGAAGCCGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS CCA 90 bp CGGCTTCCGTCAGAGACGCGCCCTCCGCGCACCCCGGGATCTGGGTaGTGCGGTTCGCAGAAGGAGGCGGGACTCTCCCACGAGCGCAAA +
Preference number: 5 (lower is better)
Translates to: RLPSETRPPRTPGSG*CGSQKEAGLSHERK
Trigger: TTTGCGCTCGTGGGAGAGTCCCGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGCGGAGGGCGCGTCTCTGACGGAAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS GCA 90 bp CTTCCGTCAGAGACGCGCCCTCCGCGCACCCCGGGATCTGGGTGGTaGGGTTCGCAGAAGGAGGCGGGACTCTCCCACGAGCGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LPSETRPPRTPGSGW*GSQKEAGLSHERKA
Trigger: AGCTTTGCGCTCGTGGGAGAGTCCCGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGCGGAGGGCGCGTCTCTGACGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CAA 90 bp CGGTATGGGAGTGTCGGGGCCAGCACAGGGCTGCCGCTTCAGCCTCCACAGGATGTGCCGGAGACAGGCTaGTGGTCGCTGATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: RYGSVGASTGLPLQPPQDVPETG*WSLMPY
Trigger: GTACGGCATCAGCGACCACAAGCCTGTCTCCGGCAC...ATCCTGTGGAGGCTGAAGCGGCAGCCCTGTGCTGGCCCCGACACTCCCATACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS CCA 90 bp GCCGCCCTTCACTGCCAGCCTTTAGCTACAGAAGAACCGCTGGGGTaGATGAGGGTGAGTTCGTCAGCATCTGCCCAGCTCCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: AALHCQPLATEEPLG*MRVSSSASAQLPGA
Trigger: GGCTCCTGGGAGCTGGGCAGATGCTGACGAACTCACCCTCATCCACCCCAGCGGTTCTTCTGTAGCTAAAGGCTGGCAGTGAAGGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461552.1
CDS-3UTR CAA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCTCGCTGCAGGAGACCTaGCTGTCCCCGACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGASLQET*LSPTQA
Trigger: TGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGA...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS GCA 90 bp GCCTCAGACTGTGCGGAGCACAGAGCGGGCAGGAGCTACAGACCCTaGAGAGACCAGGAACAGCCTAGCATGAGTCCTAGGCACACGATG +
Preference number: 5 (lower is better)
Translates to: ASDCAEHRAGRSYRP*RDQEQPSMSPRHTM
Trigger: CATCGTGTGCCTAGGACTCATGCTAGGCTGTTCCTGGTCTCTGCAGGGTCTGTAGCTCCTGCCCGCTCTGTGCTCCGCACAGTCTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000574955.1
CDS-3UTR CAA 90 bp CCTCAGATGGCAGGGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGTGCCGGAGACAGGCTaGTGGTCGCTGATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: PQMAGWRHGTQATNGSEPVPETG*WSLMPY
Trigger: GTACGGCATCAGCGACCACAAGCCTGTCTCCGGCAC...AGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACCCTGCCATCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS CCA 90 bp GGGTTCTCCAAAGGGGCACCTCACCCTCCAAGAGGGAAACGAGGCTaGGGATGGGAAAGACGACAGGGACACGATGGGCTGACGCATGAT +
Preference number: 5 (lower is better)
Translates to: GFSKGAPHPPRGKRG*GWERRQGHDGLTHD
Trigger: ATCATGCGTCAGCCCATCGTGTCCCTGTCGTCTTTCCCATCCCCAGCCTCGTTTCCCTCTTGGAGGGTGAGGTGCCCCTTTGGAGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS-3UTR CAA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCCGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGARGPGC*GCLAPH
Trigger: GTGAGGGGCGAGACATCCCAAACATCCTGGACCACG...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGGTGCCGGAGACAGGCTaGTGGTCGCTGATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWVPETG*WSLMPY
Trigger: GTACGGCATCAGCGACCACAAGCCTGTCTCCGGCAC...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTATCGCTGCAGGAGACCTaGCTGTCCCCGACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLSLQET*LSPTQA
Trigger: TGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGA...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS GCA 90 bp GGTGATGTACCTGGTGCTGGTGACGTACCTGGTTCAGGTTGTCGCTaGAGGAGACCTTGCTGTCCCCGACCCAGGCATAGGACACGTAGT +
Preference number: 5 (lower is better)
Translates to: GDVPGAGDVPGSGCR*RRPCCPRPRHRTRS
Trigger: ACTACGTGTCCTATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACCAGGTACGTCACCAGCACCAGGTACATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487039.1
CDS-3UTR CAA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGTCCCGCAGCCCCACCTaGTACAGTCCAATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWSRSPT*YSPIQS
Trigger: GGACTGGATTGGACTGTACAAGGTGGGGCTGCGGGA...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp GTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATTCGCTGCAGGAGACCTaGCTGTCCCCGACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: VVQDVWDVSPLTILHLQDSLQET*LSPTQA
Trigger: TGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGA...ATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS-3UTR CAA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTGTGGCCACAGCTCCTaGACCACTTGTCACCCCTTC +
Preference number: 5 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQCGHSS*TTCHPF
Trigger: GAAGGGGTGACAAGTGGTCAAGGAGCTGTGGCCACA...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCCGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: RTPGPDPPKCLELVLPSARGPGC*GCLAPH
Trigger: GTGAGGGGCGAGACATCCCAAACATCCTGGACCACG...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp ATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGGTCAAAGTGCTCCAGCCGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: MSRPSQFCISRIRSKCSSRGPGC*GCLAPH
Trigger: GTGAGGGGCGAGACATCCCAAACATCCTGGACCACG...GCTGGAGCACTTTGACCGGATCCTGGAGATGCAGAATTGTGAGGGGCGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CAA 90 bp TTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGTGCCGGAGACAGGCTaGTGGTCGCTGATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: LELTLGGVCGRHLAVSSGVPETG*WSLMPY
Trigger: GTACGGCATCAGCGACCACAAGCCTGTCTCCGGCAC...CCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp AATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAAGACTCCCGCAGCCCCACCTaGTACAGTCCAATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: NPRPSAHSSRGQAMRCQDSRSPT*YSPIQS
Trigger: GGACTGGATTGGACTGTACAAGGTGGGGCTGCGGGA...GTCTTGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTATCCCGCAGCCCCACCTaGTACAGTCCAATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLSRSPT*YSPIQS
Trigger: GGACTGGATTGGACTGTACAAGGTGGGGCTGCGGGA...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGTCGCTGCAGGAGACCTaGCTGTCCCCGACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQSLQET*LSPTQA
Trigger: TGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGA...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS TCA 90 bp GGAAACGAGGCTGGGGATGGGAAAGACGACAGGGACACGATGGGCTaGCGCATGATGGTACCTGGTGCAAAGCCCTTCTGGTTCCCTATT +
Preference number: 5 (lower is better)
Translates to: GNEAGDGKDDRDTMG*RMMVPGAKPFWFPI
Trigger: AATAGGGAACCAGAAGGGCTTTGCACCAGGTACCATCATGCGTCAGCCCATCGTGTCCCTGTCGTCTTTCCCATCCCCAGCCTCGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS TCA 90 bp GGGGCAAGAGTCAAGCAATGCCACTCCAATTCCTCACTGCCCCAGTaGCTACTCAGCAGCCCACTCCCACCAGAAAGCAGGCGAATCCTT +
Preference number: 5 (lower is better)
Translates to: GARVKQCHSNSSLPQ*LLSSPLPPESRRIL
Trigger: AAGGATTCGCCTGCTTTCTGGTGGGAGTGGGCTGCTGAGTAGTCACTGGGGCAGTGAGGAATTGGAGTGGCATTGCTTGACTCTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS-3UTR CAA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGCGGACATGGGAGACCTaGATGAAGCTCAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQRTWET*MKLRGE
Trigger: TTCCCCTCTGAGCTTCATCAAGGTCTCCCATGTCCG...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp GAGGCCAGGCTCACTCGTGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATAGCTTCAGGCAGATGTaGACTCCACCTTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: EARLTRGPGCLGCLAPHNSFRQM*TPPLFP
Trigger: GGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCT...ATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAGCCTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CAA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAACGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKRGPGC*GCLAPH
Trigger: GTGAGGGGCGAGACATCCCAAACATCCTGGACCACG...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCCGTGGTCCAGGATGTTaGGGATGTCTCGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: WSRMFGMSRPSQFCISRIRGPGC*GCLAPH
Trigger: GTGAGGGGCGAGACATCCCAAACATCCTGGACCACG...GATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CAA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAGCCTGGCAGGACTACTaGGGCAAGACTAGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLAWQDY*GKTRRG
Trigger: CCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGC...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp CAGAAATCCCAGACCCTCTGCTCACTCCTCACGGGGACAAGCTATGAGATGCCAGCCTGGCAGGACTACTaGGGCAAGACTAGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: QKSQTLCSLLTGTSYEMPAWQDY*GKTRRG
Trigger: CCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGC...TGGCATCTCATAGCTTGTCCCCGTGAGGAGTGAGCAGAGGGTCTGGGATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp GGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGTTCCAGCTCCTTGACCACTaGTCACCCCTTCCTCAGATG +
Preference number: 5 (lower is better)
Translates to: GGMGLKLPTEANLDPSQFQLLDH*SPLPQM
Trigger: CATCTGAGGAAGGGGTGACAAGTGGTCAAGGAGCTG...GAACTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCAGCTCCTTGACCACTaGTCACCCCTTCCTCAGATG +
Preference number: 5 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWQLLDH*SPLPQM
Trigger: CATCTGAGGAAGGGGTGACAAGTGGTCAAGGAGCTG...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCTGTGGCCACAGCTCCTaGACCACTTGTCACCCCTTC +
Preference number: 5 (lower is better)
Translates to: RTPGPDPPKCLELVLPSACGHSS*TTCHPF
Trigger: GAAGGGGTGACAAGTGGTCAAGGAGCTGTGGCCACA...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp AGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCTTCAGGGGGCCTCTTCATACACAGGCTaGCGGGGGAGAGTATGCAAC +
Preference number: 5 (lower is better)
Translates to: SSLWEEYVDDTWLSLQGASSYTG*RGRVCN
Trigger: GTTGCATACTCTCCCCCGCAAGCCTGTGTATGAAGA...GGCCCCCTGAAGAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS TCA 90 bp AGGCTGGGGATGGGAAAGACGACAGGGACACGATGGGCTGACGCATaGTGGTACCTGGTGCAAAGCCCTTCTGGTTCCCTATTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RLGMGKTTGTRWADA*WYLVQSPSGSLFFF
Trigger: GAAGAAGAATAGGGAACCAGAAGGGCTTTGCACCAGGTACCATCATGCGTCAGCCCATCGTGTCCCTGTCGTCTTTCCCATCCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS GCA 90 bp TCACAAATGGGGCAAGAGTCAAGCAATGCCACTCCAATTCCTCACTaGCCCAGTGACTACTCAGCAGCCCACTCCCACCAGAAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: SQMGQESSNATPIPH*PSDYSAAHSHQKAG
Trigger: GCCTGCTTTCTGGTGGGAGTGGGCTGCTGAGTAGTCACTGGGGCAGTGAGGAATTGGAGTGGCATTGCTTGACTCTTGCCCCATTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CCA 90 bp TGCAGACAAAGTCATAGTCCCCGTCTCCCAGTAGTCTCGACCCAGTaGCCCAGTACCACACTCCATTCAAGGGATCAGCACATGCCGTCA +
Preference number: 5 (lower is better)
Translates to: CRQSHSPRLPVVSTQ*PSTTLHSRDQHMPS
Trigger: TGACGGCATGTGCTGATCCCTTGAATGGAGTGTGGTACTGGGCCACTGGGTCGAGACTACTGGGAGACGGGGACTATGACTTTGTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS-3UTR CAA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCAGTGGGCGATTAGCGTaGTTCCCCGTGAAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLSGRLA*FPVKEQ
Trigger: CTGCTCTTTCACGGGGAACAACGCTAATCGCCCACT...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CAA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGATGTTGACTCCACCTTaGTTCCCCCAGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQMLTPP*FPQYPN
Trigger: GTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACAT...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp GCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGTCCCAGAGCTTCAGGCAGATGTaGACTCCACCTTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: ACGGEYATQSNWSNPQSQSFRQM*TPPLFP
Trigger: GGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCT...CTGGGACTGAGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAATGTGGCCACAGCTCCTaGACCACTTGTCACCCCTTC +
Preference number: 5 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKCGHSS*TTCHPF
Trigger: GAAGGGGTGACAAGTGGTCAAGGAGCTGTGGCCACA...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS GCA 90 bp GAATCCTTTCGGAAACATTACCAAGGCCCAGGGGAGGCAGCTGTCTaGCGTTTCCCAGTCCTTAGACTGCAGGGACCCAACTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: ESFRKHYQGPGEAAV*RFPVLRLQGPNLEF
Trigger: GAATTCCAAGTTGGGTCCCTGCAGTCTAAGGACTGGGAAACGGCAGACAGCTGCCTCCCCTGGGCCTTGGTAATGTTTCCGAAAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS GCA 90 bp CGACCCAGTGGCCCAGTACCACACTCCATTCAAGGGATCAGCACATaGCGTCACAAATGGGGCAAGAGTCAAGCAATGCCACTCCAATTC +
Preference number: 5 (lower is better)
Translates to: RPSGPVPHSIQGIST*RHKWGKSQAMPLQF
Trigger: GAATTGGAGTGGCATTGCTTGACTCTTGCCCCATTTGTGACGGCATGTGCTGATCCCTTGAATGGAGTGTGGTACTGGGCCACTGGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS-3UTR CAA 90 bp GTGCCTGGCAGGACTACTTGGGCAAGACTAGAAGAGGGGGTAGGAATCCAGAAACGGACATGGGAGACCTaGATGAAGCTCAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: VPGRTTWARLEEGVGIQKRTWET*MKLRGE
Trigger: TTCCCCTCTGAGCTTCATCAAGGTCTCCCATGTCCG...TTTCTGGATTCCTACCCCCTCTTCTAGTCTTGCCCAAGTAGTCCTGCCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGCTGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGATGTTGACTCCACCTTaGTTCCCCCAGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: CWPKDPHQPAHNHGVRAWMLTPP*FPQYPN
Trigger: GTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACAT...CCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCAGCTTCAGGCAGATGTaGACTCCACCTTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: RTPGPDPPKCLELVLPSASFRQM*TPPLFP
Trigger: GGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCT...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp CATACACAGGCTTGCGGGGGAGAGTATGCAACACAGAGCAACTGGAGTAACCCTCAGCTCCTTGACCACTaGTCACCCCTTCCTCAGATG +
Preference number: 5 (lower is better)
Translates to: HTQACGGEYATQSNWSNPQLLDH*SPLPQM
Trigger: CATCTGAGGAAGGGGTGACAAGTGGTCAAGGAGCTG...AGGGTTACTCCAGTTGCTCTGTGTTGCATACTCTCCCCCGCAAGCCTGTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGATCCTCCAAAATGTCTaGAGCTGGTTCTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQILQNV*SWFSLL
Trigger: CAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGAT...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTATCTTCATACACAGGCTaGCGGGGGAGAGTATGCAAC +
Preference number: 5 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLSSYTG*RGRVCN
Trigger: GTTGCATACTCTCCCCCGCAAGCCTGTGTATGAAGA...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000421807.7
CDS CCA 90 bp CCAGTACCACACTCCATTCAAGGGATCAGCACATGCCGTCACAAATaGGGCAAGAGTCAAGCAATGCCACTCCAATTCCTCACTGCCCCA +
Preference number: 5 (lower is better)
Translates to: PVPHSIQGISTCRHK*GKSQAMPLQFLTAP
Trigger: TGGGGCAGTGAGGAATTGGAGTGGCATTGCTTGACTCTTGCCCCATTTGTGACGGCATGTGCTGATCCCTTGAATGGAGTGTGGTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS-3UTR CAA 90 bp GGTGGAGGCATGGGACTCAAGCTACCAACGGAAGCGAACCTGGATCCTTCCCAGAAAAGTCCGGATTTCTaGTTCCCACTCTCAAATCCG +
Preference number: 5 (lower is better)
Translates to: GGGMGLKLPTEANLDPSQKSPDF*FPLSNP
Trigger: CGGATTTGAGAGTGGGAACAAGAAATCCGGACTTTT...CTGGGAAGGATCCAGGTTCGCTTCCGTTGGTAGCTTGAGTCCCATGCCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS-3UTR CAA 90 bp CGTCGTCAATGGCTCCTGACAAGGGTGGCACAGACGCACCTCACCTGCCAAGGAACATATATGTCAAGATaGAGGTTCCGGTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RRQWLLTRVAQTHLTCQGTYMSR*RFRLFS
Trigger: GCTGAACAACCGGAACCTCAATCTTGACATATATGT...TCCTTGGCAGGTGAGGTGCGTCTGTGCCACCCTTGTCAGGAGCCATTGACGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp CAGCCGCTGGTAATTGTTGGAAATGTGGGGAGGCAGGTGGCAGTTGATGATGCTAGCTTCAGGCAGATGTaGACTCCACCTTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: QPLVIVGNVGRQVAVDDASFRQM*TPPLFP
Trigger: GGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCT...AGCATCATCAACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CAA 90 bp GGGGGTAGGAATCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGAGCTTCAGGCAGATGTaGACTCCACCTTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GGRNPEMRRRTVPRSSLLSFRQM*TPPLFP
Trigger: GGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCT...CAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGATTCCTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCAGCTTCAGGCAGATGTaGACTCCACCTTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: WSRMFGMSRPSQFCISRISFRQM*TPPLFP
Trigger: GGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCT...GATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CAA 90 bp GATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCATCCCGCAGCCCCACCTaGTACAGTCCAATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: DSRTKCNPKSSIRKFMSPSRSPT*YSPIQS
Trigger: GGACTGGATTGGACTGTACAAGGTGGGGCTGCGGGA...TGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350761.9
CDS TCA 90 bp GACCCAATAACATATATGTCAAGATTGAGGTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACG +
Preference number: 5 (lower is better)
Translates to: DPITYMSRLRFRLFS*SRSLRSRGGAAEAT
Trigger: CGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAACCTCAATCTTGACATATATGTTATTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449479.5
ENST00000498390.5
ENST00000573790.5
CDS-3UTR CAA 90 bp TCCAGAAATGAGACGCAGAACTGTCCCCAGGTCTTCACTGTTGACACACTAGCTCGGACATGGGAGACCTaGATGAAGCTCAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SRNETQNCPQVFTVDTLARTWET*MKLRGE
Trigger: TTCCCCTCTGAGCTTCATCAAGGTCTCCCATGTCCG...AGCTAGTGTGTCAACAGTGAAGACCTGGGGACAGTTCTGCGTCTCATTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp AGGGCAAATGCTGATACTTGGCAAAGACCAGTAAGAGGATCCCCTGCATACGGACGGACATGGGAGACCTaGATGAAGCTCAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: RANADTWQRPVRGSPAYGRTWET*MKLRGE
Trigger: TTCCCCTCTGAGCTTCATCAAGGTCTCCCATGTCCG...TCCGTATGCAGGGGATCCTCTTACTGGTCTTTGCCAAGTATCAGCATTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS-3UTR CAA 90 bp TGGTCCAGGATGTTTGGGATGTCTCGCCCCTCACAATTCTGCATCTCCAGGATCATGTTGACTCCACCTTaGTTCCCCCAGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: WSRMFGMSRPSQFCISRIMLTPP*FPQYPN
Trigger: GTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACAT...GATCCTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CAA 90 bp AGAACCCCAGGGCCAGATCCTCCAAAATGTCTTGAGCTGGTTCTCCCTTCTGCCATCCTCCAAAATGTCTaGAGCTGGTTCTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: RTPGPDPPKCLELVLPSAILQNV*SWFSLL
Trigger: CAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGAT...GGCAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGATCTGGCCCTGGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp TGGCCGAAGGACCCTCATCAACCTGCTCATAACCATGGCGTAAGAGCCTGGCTAATCCTCCAAAATGTCTaGAGCTGGTTCTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: WPKDPHQPAHNHGVRAWLILQNV*SWFSLL
Trigger: CAGAAGGGAGAACCAGCTCAAGACATTTTGGAGGAT...TAGCCAGGCTCTTACGCCATGGTTATGAGCAGGTTGATGAGGGTCCTTCGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS TCA 90 bp TTCCCAATAACATATATGTCAAGATTGAGGTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACG +
Preference number: 5 (lower is better)
Translates to: FPITYMSRLRFRLFS*SRSLRSRGGAAEAT
Trigger: CGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAACCTCAATCTTGACATATATGTTATTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445774.2
ENST00000576646.7
CDS CCA 90 bp AAAGGATCTTATCTCAATCTGATTTCGGATTCCCGGGGTTCACCATaGGATCAGGCAGACCTCCTGATGTATGTGCTGAGCCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: KGSYLNLISDSRGSP*DQADLLMYVLSLLP
Trigger: AGGCAGGAGGCTCAGCACATACATCAGGAGGTCTGCCTGATCCCATGGTGAACCCCGGGAATCCGAAATCAGATTGAGATAAGATCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000477910.5
ENST00000498390.5
CDS-3UTR CAA 90 bp GATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCACGGACATGGGAGACCTaGATGAAGCTCAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: DSRTKCNPKSSIRKFMSPRTWET*MKLRGE
Trigger: TTCCCCTCTGAGCTTCATCAAGGTCTCCCATGTCCG...TGGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576646.7
CDS-3UTR CAA 90 bp ACTGCTTGCACCAGTCTATGTAGCCTGTACAAATGTGAGCATCTCCCCTCCCAGATGTTGACTCCACCTTaGTTCCCCCAGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: TACTSLCSLYKCEHLPSQMLTPP*FPQYPN
Trigger: GTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACAT...CTGGGAGGGGAGATGCTCACATTTGTACAGGCTACATAGACTGGTGCAAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS TCA 90 bp AAACCAATAACATATATGTCAAGATTGAGGTTCCGGTTGTTCAGCTaGAGCAGGTCACTGAGATCTAGAGGGGGCGCTGCCGAAGCCACG +
Preference number: 5 (lower is better)
Translates to: KPITYMSRLRFRLFS*SRSLRSRGGAAEAT
Trigger: CGTGGCTTCGGCAGCGCCCCCTCTAGATCTCAGTGACCTGCTTCAGCTGAACAACCGGAACCTCAATCTTGACATATATGTTATTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
ENST00000477910.5
ENST00000571274.5
ENST00000575172.5
CDS-3UTR CAA 90 bp AGCCTGGTTAGAGCTCACTCTGGGAGGAGTATGTGGACGACACTTGGCTGTCTCACATATATGTCAAGATaGAGGTTCCGGTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLVRAHSGRSMWTTLGCLTYMSR*RFRLFS
Trigger: GCTGAACAACCGGAACCTCAATCTTGACATATATGT...GAGACAGCCAAGTGTCGTCCACATACTCCTCCCAGAGTGAGCTCTAACCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000421807.7
CDS-3UTR CAA 90 bp GGATTCCCGAACAAAGTGCAACCCAAAGTCCTCGATCCGAAAGTTCATGTCTCCATGTTGACTCCACCTTaGTTCCCCCAGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: GFPNKVQPKVLDPKVHVSMLTPP*FPQYPN
Trigger: GTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACAT...GGAGACATGAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350761.9
ENST00000573790.5
ENST00000576646.7
CDS-3UTR CAA 90 bp GTCCTCGATCCGAAAGTTCATGTCTCCAAACCAGATAATGAGGCCAGGCTCACTATGTTGACTCCACCTTaGTTCCCCCAGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: VLDPKVHVSKPDNEARLTMLTPP*FPQYPN
Trigger: GTTTGGGTACTGGGGGAACAAAGGTGGAGTCAACAT...AGTGAGCCTGGCCTCATTATCTGGTTTGGAGACATGAACTTTCGGATCGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573790.5
ENST00000576646.7
CDS CCA 90 bp CAAGTCACGACGTGTATGCTGCAGCAGCTGGAGATTCTAAGAGGATaGAGAGCAAAAGTCCGGATTTCTTGTTCCCACTCTCAAATCCGA +
Preference number: 5 (lower is better)
Translates to: QVTTCMLQQLEILRG*RAKVRISCSHSQIR
Trigger: TCGGATTTGAGAGTGGGAACAAGAAATCCGGACTTTTGCTCTCCATCCTCTTAGAATCTCCAGCTGCTGCAGCATACACGTCGTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477910.5
CDS-3UTR CAA 90 bp GTCTTCACTGTTGACACACTAGCTGGTTTCACTCACATCTCAGCAACAAAAACCAAAAGTCCGGATTTCTaGTTCCCACTCTCAAATCCG +
Preference number: 5 (lower is better)
Translates to: VFTVDTLAGFTHISATKTKSPDF*FPLSNP
Trigger: CGGATTTGAGAGTGGGAACAAGAAATCCGGACTTTT...GGTTTTTGTTGCTGAGATGTGAGTGAAACCAGCTAGTGTGTCAACAGTGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS CCA 72 bp TTCCGCGAGCTCATGGCCGCCGTCGTCCCCGCGCGGTaGTCCGGCAGGTTCGCGTCTCCCGGCCAGCGGGTC +
Preference number: 6 (lower is better)
Translates to: FRELMAAVVPAR*SGRFASPGQRV
Trigger: GACCCGCTGGCCGGGAGACGCGAACCTGCCGGACCACCGCGCGGGGACGACGGCGGCCATGAGCTCGCGGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
ENST00000445774.2
ENST00000449479.5
ENST00000477910.5
ENST00000498390.5
ENST00000573790.5
ENST00000574561.1
ENST00000574955.1
ENST00000575172.5
CDS CCA 72 bp TCCTGCCTTTCGGCCCGCTCAGCTTCCGCGAGCTCATaGCCGCCGTCGTCCCCGCGCGGTGGTCCGGCAGGT +
Preference number: 6 (lower is better)
Translates to: SCLSARSASASS*PPSSPRGGPAG
Trigger: ACCTGCCGGACCACCGCGCGGGGACGACGGCGGCCATGAGCTCGCGGAAGCTGAGCGGGCCGAAAGGCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320345.10
ENST00000350761.9
ENST00000406424.8
ENST00000421807.7
ENST00000445774.2
ENST00000449479.5
ENST00000477910.5
ENST00000498390.5
ENST00000573790.5
ENST00000574561.1
ENST00000574955.1
ENST00000575172.5
CDS GCA 72 bp GAGACGCGCCCTCCGCGCACCCCGGGATCTGGGTGGTaGGGTTCGCAGAAGGAGGCGGGACTCTCCCACGAG +
Preference number: 6 (lower is better)
Translates to: ETRPPRTPGSGW*GSQKEAGLSHE
Trigger: CTCGTGGGAGAGTCCCGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGCGGAGGGCGCGTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS CCA 72 bp TCAGAGACGCGCCCTCCGCGCACCCCGGGATCTGGGTaGTGCGGTTCGCAGAAGGAGGCGGGACTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: SETRPPRTPGSG*CGSQKEAGLSH
Trigger: GTGGGAGAGTCCCGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGCGGAGGGCGCGTCTCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS CCA 72 bp TCCGTCAGAGACGCGCCCTCCGCGCACCCCGGGATCTaGGTGGTGCGGTTCGCAGAAGGAGGCGGGACTCTC +
Preference number: 6 (lower is better)
Translates to: SVRDAPSAHPGI*VVRFAEGGGTL
Trigger: GAGAGTCCCGCCTCCTTCTGCGAACCGCACCACCCAGATCCCGGGGTGCGCGGAGGGCGCGTCTCTGACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000406424.8
CDS GCA 72 bp GGCTACCGTACTGTGTGCCTCCCCGCCGCCCTTCACTaGCAGCCTTTAGCTACAGAAGAACCGCTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: GYRTVCLPAALH*QPLATEEPLGW
Trigger: CCACCCCAGCGGTTCTTCTGTAGCTAAAGGCTGGCAGTGAAGGGCGGCGGGGAGGCACACAGTACGGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461552.1
CDS GCA 72 bp CCTGGTGCTGGTGACGTACCTGGTTCAGGTTGTCGCTaGAGGAGACCTTGCTGTCCCCGACCCAGGCATAGG +
Preference number: 6 (lower is better)
Translates to: PGAGDVPGSGCR*RRPCCPRPRHR
Trigger: CCTATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACCAGGTACGTCACCAGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487039.1
CDS CCA 72 bp GAGCTGGGATATCCGACCTGGCAGGAAAGGCAATCATaGCCTCCACAGGTCTCCCCTGGGGGACTGGCTGAC +
Preference number: 6 (lower is better)
Translates to: ELGYPTWQERQS*PPQVSPGGLAD
Trigger: GTCAGCCAGTCCCCCAGGGGAGACCTGTGGAGGCCATGATTGCCTTTCCTGCCAGGTCGGATATCCCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495339.1
CDS CCA 72 bp AAAGGGGCACCTCACCCTCCAAGAGGGAAACGAGGCTaGGGATGGGAAAGACGACAGGGACACGATGGGCTG +
Preference number: 6 (lower is better)
Translates to: KGAPHPPRGKRG*GWERRQGHDGL
Trigger: CAGCCCATCGTGTCCCTGTCGTCTTTCCCATCCCCAGCCTCGTTTCCCTCTTGGAGGGTGAGGTGCCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS GCA 72 bp CGGAAACATTACCAAGGCCCAGGGGAGGCAGCTGTCTaGCGTTTCCCAGTCCTTAGACTGCAGGGACCCAAC +
Preference number: 6 (lower is better)
Translates to: RKHYQGPGEAAV*RFPVLRLQGPN
Trigger: GTTGGGTCCCTGCAGTCTAAGGACTGGGAAACGGCAGACAGCTGCCTCCCCTGGGCCTTGGTAATGTTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CAA 72 bp CCCTCCTGGAACTCCCGGAGCAGCGGGTCATGTTTCTaGGCAATGCTGAGCCAGTACCCAAACAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: PSWNSRSSGSCF*AMLSQYPNRPV
Trigger: CACTGGCCTGTTTGGGTACTGGCTCAGCATTGCCAAGAAACATGACCCGCTGCTCCGGGAGTTCCAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575172.5
CDS CAA 90 bp CTCGGGAAGGATGAACCAGGGGCTGTCGCTGATGGACTTCCTGCCTaGCCACCACATCACCTTGTACAGTCCAATCCAGTCCCACGGGCT +
Preference number: 6 (lower is better)
Translates to: LGKDEPGAVADGLPA*PPHHLVQSNPVPRA
Trigger: AGCCCGTGGGACTGGATTGGACTGTACAAGGTGATGTGGTGGCAAGGCAGGAAGTCCATCAGCGACAGCCCCTGGTTCATCCTTCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461552.1
CDS CAA 90 bp AGTAGGCGGCCCTCCTGGAACTCCCGGAGCAGCGGGTCATGTTTCTaGGCAATGCTGAGCTGCAGACAAAGTCATAGTCCCCGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: SRRPSWNSRSSGSCF*AMLSCRQSHSPRLP
Trigger: TGGGAGACGGGGACTATGACTTTGTCTGCAGCTCAGCATTGCCAAGAAACATGACCCGCTGCTCCGGGAGTTCCAGGAGGGCCGCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS GCA 72 bp GACGTACCTGGTTCAGGTTGTCGCTGCAGGAGACCTTaGTGTCCCCGACCCAGGCATAGGACACGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: DVPGSGCRCRRP*CPRPRHRTRSH
Trigger: ATGACTACGTGTCCTATGCCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACCAGGTACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487039.1
CDS GCA 72 bp CCTAGCATGAGTCCTAGGCACACGATGAGGAGTACCTaGAGCAGCTGGAGATCTGAGCCTCCTGCCTTTCGG +
Preference number: 6 (lower is better)
Translates to: PSMSPRHTMRST*SSWRSEPPAFR
Trigger: CCGAAAGGCAGGAGGCTCAGATCTCCAGCTGCTGCAGGTACTCCTCATCGTGTGCCTAGGACTCATGCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574955.1
CDS CCA 72 bp CTGCCAGACCCAGGCTCACTCGTGGTCCAGGATGTTTaGGATGTCTCGCCCCTCACAATTCTGCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: LPDPGSLVVQDV*DVSPLTILHLQ
Trigger: CTGGAGATGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGAGTGAGCCTGGGTCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460733.5
CDS TCA 72 bp ACTCCCGGAGCAGCGGGTCATGTTTCTTGGCAATGCTaGGCTGCAGACAAAGTCATAGTCCCCGTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: TPGAAGHVSWQC*AADKVIVPVSQ
Trigger: CTGGGAGACGGGGACTATGACTTTGTCTGCAGCTCAGCATTGCCAAGAAACATGACCCGCTGCTCCGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS GCA 72 bp ACCACCATTCAAACCGGAGAGACCTACCAAAGAGCCTaGTCTGGCAAACACAGAGCAGGCTGTGGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: TTIQTGETYQRA*SGKHRAGCGPS
Trigger: GGAAGGGCCACAGCCTGCTCTGTGTTTGCCAGAGCAGGCTCTTTGGTAGGTCTCTCCGGTTTGAATGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481867.1
CDS GCA 72 bp GGGAGGCAGCTGTCTGCCGTTTCCCAGTCCTTAGACTaGAGGGACCCAACTTGGAATTCCATCTCTAGGGGA +
Preference number: 6 (lower is better)
Translates to: GRQLSAVSQSLD*RDPTWNSISRG
Trigger: TCCCCTAGAGATGGAATTCCAAGTTGGGTCCCTGCAGTCTAAGGACTGGGAAACGGCAGACAGCTGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CCA 72 bp GCCAGGGCACGCGTGGGTCCTCTGGAACTGTTCTCATaGCTCCTAAACCACCATTCAAACCGGAGAGACCTA +
Preference number: 6 (lower is better)
Translates to: ARARVGPLELFS*LLNHHSNRRDL
Trigger: TAGGTCTCTCCGGTTTGAATGGTGGTTTAGGAGCCATGAGAACAGTTCCAGAGGACCCACGCGTGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481867.1
CDS CCA 72 bp AGTCATAGTCCCCGTCTCCCAGTAGTCTCGACCCAGTaGCCCAGTACCACACTCCATTCAAGGGATCAGCAC +
Preference number: 6 (lower is better)
Translates to: SHSPRLPVVSTQ*PSTTLHSRDQH
Trigger: GTGCTGATCCCTTGAATGGAGTGTGGTACTGGGCCACTGGGTCGAGACTACTGGGAGACGGGGACTATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CAA 72 bp CCCTCCTGGAACTCCCGGAGCAGCGGGTCATGTTTCTaGGCAATGCTGAGCTGCAGACAAAGTCATAGTCCC +
Preference number: 6 (lower is better)
Translates to: PSWNSRSSGSCF*AMLSCRQSHSP
Trigger: GGGACTATGACTTTGTCTGCAGCTCAGCATTGCCAAGAAACATGACCCGCTGCTCCGGGAGTTCCAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CAA 72 bp GATGAACCAGGGGCTGTCGCTGATGGACTTCCTGCCTaGCCACCACATCACCTTGTACAGTCCAATCCAGTC +
Preference number: 6 (lower is better)
Translates to: DEPGAVADGLPA*PPHHLVQSNPV
Trigger: GACTGGATTGGACTGTACAAGGTGATGTGGTGGCAAGGCAGGAAGTCCATCAGCGACAGCCCCTGGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461552.1
CDS GCA 72 bp GGCCCAGTACCACACTCCATTCAAGGGATCAGCACATaGCGTCACAAATGGGGCAAGAGTCAAGCAATGCCA +
Preference number: 6 (lower is better)
Translates to: GPVPHSIQGIST*RHKWGKSQAMP
Trigger: TGGCATTGCTTGACTCTTGCCCCATTTGTGACGGCATGTGCTGATCCCTTGAATGGAGTGTGGTACTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CCA 72 bp CGACAGGGACACGATGGGCTGACGCATGATGGTACCTaGTGCAAAGCCCTTCTGGTTCCCTATTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RQGHDGLTHDGT*CKALLVPYSSS
Trigger: AGAAGAAGAATAGGGAACCAGAAGGGCTTTGCACCAGGTACCATCATGCGTCAGCCCATCGTGTCCCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CCA 72 bp TATCTCAATCTGATTTCGGATTCCCGGGGTTCACCATaGGATCAGGCAGACCTCCTGATGTATGTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: YLNLISDSRGSP*DQADLLMYVLS
Trigger: GCTCAGCACATACATCAGGAGGTCTGCCTGATCCCATGGTGAACCCCGGGAATCCGAAATCAGATTGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320345.10
ENST00000406424.8
ENST00000477910.5
ENST00000498390.5
CDS CCA 72 bp CACTCCATTCAAGGGATCAGCACATGCCGTCACAAATaGGGCAAGAGTCAAGCAATGCCACTCCAATTCCTC +
Preference number: 6 (lower is better)
Translates to: HSIQGISTCRHK*GKSQAMPLQFL
Trigger: GAGGAATTGGAGTGGCATTGCTTGACTCTTGCCCCATTTGTGACGGCATGTGCTGATCCCTTGAATGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477115.1
CDS CAA 90 bp GCAGCTGGAGATTCTAAGAGGATGGAGAGCAAAAGTCCGGATTTCTaGTTCCCACTCTCAAATCCGACGATTAGCAGCAAATCCAAGCAT +
Preference number: 6 (lower is better)
Translates to: AAGDSKRMESKSPDF*FPLSNPTISSKSKH
Trigger: ATGCTTGGATTTGCTGCTAATCGTCGGATTTGAGAGTGGGAACAAGAAATCCGGACTTTTGCTCTCCATCCTCTTAGAATCTCCAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406424.8
ENST00000477910.5
CDS CAA 90 bp ACGACGTGTATGTCTAAGAGGATGGAGAGCAAAAGTCCGGATTTCTaGTTCCCACTCTCAAATCCGACGATTAGCAGCAAATCCAAGCAT +
Preference number: 6 (lower is better)
Translates to: TTCMSKRMESKSPDF*FPLSNPTISSKSKH
Trigger: ATGCTTGGATTTGCTGCTAATCGTCGGATTTGAGAGTGGGAACAAGAAATCCGGACTTTTGCTCTCCATCCTCTTAGACATACACGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000498390.5
CDS CAA 72 bp ATGTCTAAGAGGATGGAGAGCAAAAGTCCGGATTTCTaGTTCCCACTCTCAAATCCGACGATTAGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: MSKRMESKSPDF*FPLSNPTISSK
Trigger: TTTGCTGCTAATCGTCGGATTTGAGAGTGGGAACAAGAAATCCGGACTTTTGCTCTCCATCCTCTTAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320345.10
ENST00000498390.5