RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INPP5E (Homo sapiens)

Ensembl gene IDs: ENSG00000148384

Ensembl transcript IDs: ENST00000371712.4, ENST00000635815.1, ENST00000674513.1, ENST00000674693.1, ENST00000675256.1, ENST00000676019.1

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCGTGCCACGTCCTGGAGGCTGTGTGGCTTCCTCAGCTGGGCTCTaGGGCCCACTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCA +
Preference number: 1 (lower is better)
Translates to: TVPRPGGCVASSAGL*GPLRGLRPQGSPSP
Trigger: TGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAGTGGGCCCCAGAGCCCAGCTGAGGAAGCCACACAGCCTCCAGGACGTGGCACGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR GCA 90 bp CGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTaGCACCCATGCTGTATGGACCTGCCATGGAGACGGGGGTCCAAG +
Preference number: 1 (lower is better)
Translates to: REWLGSVVLLGGSKP*HPCCMDLPWRRGSK
Trigger: CTTGGACCCCCGTCTCCATGGCAGGTCCATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 90 bp CCCACACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTaGCTTCCTTCCTGGGACGCTGGCACAGAGGCACGGTCGCCACAG +
Preference number: 1 (lower is better)
Translates to: PTPCGPATEDRLAQG*LPSWDAGTEARSPQ
Trigger: CTGTGGCGACCGTGCCTCTGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 90 bp GGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTaGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCAT +
Preference number: 1 (lower is better)
Translates to: GAAQERILTSAPESG*GPWCCWAGPNPATH
Trigger: ATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 90 bp CACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTaGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCAC +
Preference number: 1 (lower is better)
Translates to: HRSCSGTDSDVCPRE*LGSVVLLGGSKPCH
Trigger: GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR GCA 90 bp GAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTaGTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATGGACC +
Preference number: 1 (lower is better)
Translates to: ERILTSAPESGWGPW*CWAGPNPATHAVWT
Trigger: GGTCCATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 90 bp CACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTaGCACAGAGGCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGG +
Preference number: 1 (lower is better)
Translates to: HRGQARSGLASFLGR*HRGTVATVPRIPER
Trigger: CCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGCCTCTGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 90 bp CAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTaGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATGG +
Preference number: 1 (lower is better)
Translates to: QERILTSAPESGWGP*CCWAGPNPATHAVW
Trigger: CCATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR TCA 90 bp CGTCACCAAGACCATGAGATGGTTTCACACAATAGGCTTGGCCTATaGGAGGAGGGGAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTA +
Preference number: 1 (lower is better)
Translates to: RHQDHEMVSHNRLGL*EEGKQLLTQLGRPL
Trigger: TAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAACCATCTCATGGTCTTGGTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 90 bp TTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTaGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTT +
Preference number: 1 (lower is better)
Translates to: FYTLEERNPGHGGDP*PRCSRWWHPELPAV
Trigger: AACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp CTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCACGGGGGTCCAAGCCCTaGCCACCCACACCGTGTGGA +
Preference number: 2 (lower is better)
Translates to: LTSAPESGWGPWCCWAGPRGSKP*PPTPCG
Trigger: TCCACACGGTGTGGGTGGGCAGGGCTTGGACCCCCG...TGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCAGCCCCCGAGAGTGGCTaGGGTCCGTGGTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPAPESG*GPWCCW
Trigger: CCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGC...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACCGGGGGTCCAAGCCCTaGCCACCCACACCGTGTGGA +
Preference number: 2 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHRGSKP*PPTPCG
Trigger: TCCACACGGTGTGGGTGGGCAGGGCTTGGACCCCCG...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCGGTCCGTGGTGCTGCTaGGCGGGTCCAAACCCTGCC +
Preference number: 2 (lower is better)
Translates to: GAARRTQMDACFGCGGRGGPWCC*AGPNPA
Trigger: GGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACC...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp CTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAGCCACCCATGCTGTATaGACCTGCCATGGAGACGGG +
Preference number: 2 (lower is better)
Translates to: LTSAPESGWGPWCCWAGPATHAV*TCHGDG
Trigger: CCCGTCTCCATGGCAGGTCCATACAGCATGGGTGGC...TGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTGGTCCGTGGTGCTGCTaGGCGGGTCCAAACCCTGCC +
Preference number: 2 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRGPWCC*AGPNPA
Trigger: GGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACC...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTTGGGGTCCGTGGTGCTaGTGGGCGGGTCCAAACCCT +
Preference number: 2 (lower is better)
Translates to: GLPGGHRWTPASGVEGEAWGPWC*WAGPNP
Trigger: AGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCA...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CAA 90 bp ACCCACACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTaGGCTTCCTTCCTGGGACGCTGGCACAGAGGCACGGTCGCCACA +
Preference number: 2 (lower is better)
Translates to: THTVWTCHRGQARSG*ASFLGRWHRGTVAT
Trigger: TGTGGCGACCGTGCCTCTGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGTGTGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGTCTGCCCCCGAGAGTaGCTGGGGTCCGTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEVCPRE*LGSVVL
Trigger: CAGCACCACGGACCCCAGCCACTCTCGGGGGCAGAC...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR TCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTCTCAGGAACGGATTCTaGCGTCTGCCCCCGAGAGTG +
Preference number: 2 (lower is better)
Translates to: GLPGGHRWTPASGVEGEALRNGF*RLPPRV
Trigger: CACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAG...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACCCAGGGCACAGGAGCTaGTCAGGAACGGATTCTGAC +
Preference number: 2 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHPGHRS*SGTDSD
Trigger: GTCAGAATCCGTTCCTGAGCAGCTCCTGTGCCCTGG...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTTGTATGGACCTGCCATaGAGACGGGGGTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRCMDLP*RRGSKP
Trigger: GGGCTTGGACCCCCGTCTCCATGGCAGGTCCATACA...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR TCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACCTCTGGATACCCGTGTaGCATGGGGTGGTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHLWIPV*HGVVCV
Trigger: AACACACACCACCCCATGTCACACGGGTATCCAGAG...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp GAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGGGCTGGGGTCCGTGGTaGTGCTGGGCGGGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: ERNPGHGGDPWPRCSRWWGWGPW*CWAGPN
Trigger: GTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCC...CCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGACGGATTCTGACGTCTaGCCCCGAGAGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: VFEGLPGGHRWTPASGVETDSDV*PREWLG
Trigger: CCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGT...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCCACCCACACCGTGTaGACCTGCCACAGAGGACAG +
Preference number: 2 (lower is better)
Translates to: TGAAQERILTSAPESGWGPTHTV*TCHRGQ
Trigger: CTGTCCTCTGTGGCAGGTCCACACGGTGTGGGTGGG...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCACAATCACCCCACGTTaGAGCTGTGAGTCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: GAARRTQMDACFGCGGRGTITPR*SCESSF
Trigger: GAACGAGGACTCACAGCTGCAACGTGGGGTGATTGT...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGTCCTTCCTGGGACGCTaGCACAGAGGCACGGTCGCC +
Preference number: 2 (lower is better)
Translates to: ERNPGHGGDPWPRCSRWWSFLGR*HRGTVA
Trigger: GGCGACCGTGCCTCTGTGCCAGCGTCCCAGGAAGGA...CCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTACGGATTCTGACGTCTaGCCCCGAGAGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: EAASYSAGEALILGCRPPTDSDV*PREWLG
Trigger: CCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGT...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAATGTATGGACCTGCCATaGAGACGGGGGTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPECMDLP*RRGSKP
Trigger: GGGCTTGGACCCCCGTCTCCATGGCAGGTCCATACA...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACCAGGAGGACACAGATaGACGCCTGCTTCGGGTGTG +
Preference number: 2 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEPGGHR*TPASGV
Trigger: CACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGG...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACGACTTGCAGCCAAGTaGAGGGGAACCGTGCCACGT +
Preference number: 2 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPERLAAK*RGTVPR
Trigger: ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCG...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR TCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGCCCACGTTGCAGCTGTaGGTCCTCGTTCAGCAAACT +
Preference number: 2 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEPTLQL*VLVQQT
Trigger: AGTTTGCTGAACGAGGACTCACAGCTGCAACGTGGG...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR TCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACCCCACGTTGCAGCTGTaGGTCCTCGTTCAGCAAACT +
Preference number: 2 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDPTLQL*VLVQQT
Trigger: AGTTTGCTGAACGAGGACTCACAGCTGCAACGTGGG...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACCAGGGCACAGGAGCTaGTCAGGAACGGATTCTGAC +
Preference number: 2 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEPGHRS*SGTDSD
Trigger: GTCAGAATCCGTTCCTGAGCAGCTCCTGTGCCCTGG...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTGCCACCCATGCTGTATaGACCTGCCATGGAGACGGG +
Preference number: 2 (lower is better)
Translates to: EAASYSAGEALILGCRPPATHAV*TCHGDG
Trigger: CCCGTCTCCATGGCAGGTCCATACAGCATGGGTGGC...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCGTCTGCCCCCGAGAGTaGCTGGGGTCCGTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFVCPRE*LGSVVL
Trigger: CAGCACCACGGACCCCAGCCACTCTCGGGGGCAGAC...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTTCCTCAGCTGGGCTCTaGGGCCCACTCAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPSSAGL*GPLRGL
Trigger: CAGACCTCTGAGTGGGCCCCAGAGCCCAGCTGAGGA...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGGCTGGGGTCCGTGGTaGTGCTGGGCGGGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTGWGPW*CWAGPN
Trigger: GTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCTGTGGAGGGAGAGGCTaGTGCAGAGCACGGGGGTGT +
Preference number: 2 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFCGGRG*CRARGC
Trigger: ACACCCCCGTGCTCTGCACCAGCCTCTCCCTCCACA...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTGTCCTGGAGGCTGTGTaGCTTCCTCAGCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSVLEAV*LPQLGS
Trigger: AGAGCCCAGCTGAGGAAGCCACACAGCCTCCAGGAC...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR TCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCTCAGGAACGGATTCTaGCGTCTGCCCCCGAGAGTG +
Preference number: 2 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFLRNGF*RLPPRV
Trigger: CACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAG...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCCATGGCAGGCGACTTaGAGCCAAGTGGAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFPWQAT*SQVEGN
Trigger: GTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGG...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCTCCTTCCTGGGACGCTaGCACAGAGGCACGGTCGCC +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTSFLGR*HRGTVA
Trigger: GGCGACCGTGCCTCTGTGCCAGCGTCCCAGGAAGGA...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCCAGGAGGACACAGATaGACGCCTGCTTCGGGTGTG +
Preference number: 2 (lower is better)
Translates to: NGSILSKKETRDMVGIPGPGGHR*TPASGV
Trigger: CACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGG...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCGGCCTCCTCGCCCCATaGCAGGCGACTTGCAGCCAA +
Preference number: 2 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSGLLAP*QATCSQ
Trigger: TTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGCC...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCCACACCGTGTGGACCTaGCACAGAGGACAGGCTCGC +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTHTVWT*HRGQAR
Trigger: GCGAGCCTGTCCTCTGTGGCAGGTCCACACGGTGTG...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGCCCTTATACTGGGGTaGAGGCCTCCTCGCCCCATG +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTALILG*RPPRPM
Trigger: CATGGGGCGAGGAGGCCTGCACCCCAGTATAAGGGC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCCGTGTGACATGGGGTaGTGTGTGTTTGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: NGSILSKKETRDMVGIPGPCDMG*CVFEGL
Trigger: CAGCCCCTCAAACACACACCACCCCATGTCACACGG...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTACAATCACCCCACGTTaGAGCTGTGAGTCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSTITPR*SCESSF
Trigger: GAACGAGGACTCACAGCTGCAACGTGGGGTGATTGT...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGTCCTGGAGGCTGTGTaGCTTCCTCAGCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTVLEAV*LPQLGS
Trigger: AGAGCCCAGCTGAGGAAGCCACACAGCCTCCAGGAC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACGGGAGGCCCTTATACTaGGGTGCAGGCCTCCTCGCC +
Preference number: 2 (lower is better)
Translates to: GHKARMNGSILSKKETRDGRPLY*GAGLLA
Trigger: GGCGAGGAGGCCTGCACCCCAGTATAAGGGCCTCCC...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTAGCTTCTTACTCAGCTaGGGAGGCCCTTATACTGGG +
Preference number: 2 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSSFLLS*GGPYTG
Trigger: CCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCT...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CAA 90 bp CGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTCCCAGTGGGTTTaGATCAATACAATCACCCCACGTTGCAGCTGTGAGTCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: RIPERRQTLCPSQWV*INTITPRCSCESSF
Trigger: GAACGAGGACTCACAGCTGCAACGTGGGGTGATTGTATTGATCAAAACCCACTGGGAAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCCATGCTGTATGGACCTaGCATGGAGACGGGGGTCCA +
Preference number: 2 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSHAVWT*HGDGGP
Trigger: TGGACCCCCGTCTCCATGGCAGGTCCATACAGCATG...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGCCCAGATCCAGCCTTaGTCTGGATACCCGTGTGAC +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTAQIQP*SGYPCD
Trigger: GTCACACGGGTATCCAGAGCAAGGCTGGATCTGGGC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCAAACCCTGCCACCCATaGTGTATGGACCTGCCATGG +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTKPCHP*CMDLPW
Trigger: CCATGGCAGGTCCATACAGCATGGGTGGCAGGGTTT...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGTGTGTTTGAGGGGCTaGCAGGAGGACACAGATGGA +
Preference number: 2 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTVCLRG*QEDTDG
Trigger: TCCATCTGTGTCCTCCTGGCAGCCCCTCAAACACAC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTTGTCCTTCCCAGTaGGTTTTGATCAATACAATC +
Preference number: 2 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPELCPSQ*VLINTI
Trigger: GATTGTATTGATCAAAACCCACTGGGAAGGACAAAG...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR GCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACCATGCTGTATGGACCTaGCATGGAGACGGGGGTCCA +
Preference number: 2 (lower is better)
Translates to: GHKARMNGSILSKKETRDHAVWT*HGDGGP
Trigger: TGGACCCCCGTCTCCATGGCAGGTCCATACAGCATG...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCACCAAGACCATGAGATaGTTTCACACAATAGGCTTG +
Preference number: 2 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFTKTMR*FHTIGL
Trigger: CAAGCCTATTGTGTGAAACCATCTCATGGTCTTGGT...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTTTGTCCTTCCCAGTaGGTTTTGATCAATACAATC +
Preference number: 2 (lower is better)
Translates to: NGSILSKKETRDMVGIPGLCPSQ*VLINTI
Trigger: GATTGTATTGATCAAAACCCACTGGGAAGGACAAAG...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCCATGGTGGGGATCCCTaGCCTAGGTGTTCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLHGGDP*PRCSRW
Trigger: CCACCTTGAACACCTAGGCCAGGGATCCCCACCATG...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR GCA 72 bp CTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTaGTGCTGGGCGGGTCCAAACCCTGCCACCCATGCT +
Preference number: 3 (lower is better)
Translates to: LTSAPESGWGPW*CWAGPNPATHA
Trigger: AGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp TCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTaGGCGGGTCCAAACCCTGCCACCCATGCTGTATGG +
Preference number: 3 (lower is better)
Translates to: SAPESGWGPWCC*AGPNPATHAVW
Trigger: CCATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTaGAGGGGAACCGTGCCACGTCCTGGAGGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: ASSPHGRRLAAK*RGTVPRPGGCV
Trigger: CACACAGCCTCCAGGACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR GCA 72 bp GGGCACAGGAGCTGCTCAGGAACGGATTCTGACGTCTaGCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GHRSCSGTDSDV*PREWLGSVVLL
Trigger: CAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp CAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTaGCACAGAGGCACGGTCGCCACAGTCCCTCGGATC +
Preference number: 3 (lower is better)
Translates to: QARSGLASFLGR*HRGTVATVPRI
Trigger: GATCCGAGGGACTGTGGCGACCGTGCCTCTGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp ATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTaGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCAT +
Preference number: 3 (lower is better)
Translates to: ILTSAPESGWGP*CCWAGPNPATH
Trigger: ATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp CAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTaGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCT +
Preference number: 3 (lower is better)
Translates to: QERILTSAPESG*GPWCCWAGPNP
Trigger: AGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp AGTGGAGGGGAACCGTGCCACGTCCTGGAGGCTGTGTaGCTTCCTCAGCTGGGCTCTGGGGCCCACTCAGAG +
Preference number: 3 (lower is better)
Translates to: SGGEPCHVLEAV*LPQLGSGAHSE
Trigger: CTCTGAGTGGGCCCCAGAGCCCAGCTGAGGAAGCCACACAGCCTCCAGGACGTGGCACGGTTCCCCTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp TGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTaGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAA +
Preference number: 3 (lower is better)
Translates to: CSGTDSDVCPRE*LGSVVLLGGSK
Trigger: TTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CAA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCAGGCTCGCTCAGGGTaGGCTTCCTTCCTGGGACGC +
Preference number: 3 (lower is better)
Translates to: TGAAQERILTSAPESGWGQARSG*ASFLGR
Trigger: GCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTG...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR GCA 72 bp ATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTaGCACGTCCTGGAGGCTGTGTGGCTTCCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: MAGDLQPSGGEP*HVLEAVWLPQL
Trigger: CAGCTGAGGAAGCCACACAGCCTCCAGGACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CAA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACCCATGGCAGGCGACTaGCAGCCAAGTGGAGGGGAA +
Preference number: 3 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEPMAGD*QPSGGE
Trigger: TTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGG...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp AAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTaGGGTGCAGGCCTCCTCGCCCCATGGCAGGCGACT +
Preference number: 3 (lower is better)
Translates to: KQLLTQLGRPLY*GAGLLAPWQAT
Trigger: AGTCGCCTGCCATGGGGCGAGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp GCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCTaGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTCG +
Preference number: 3 (lower is better)
Translates to: AYERRGSSFLLS*GGPYTGVQASS
Trigger: CGAGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CAA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTAAGGCGGCAAACTCTTaGTCCTTCCCAGTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRKAANS*SFPVGF
Trigger: AAAACCCACTGGGAAGGACAAAGAGTTTGCCGCCTT...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CAA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACACCTTCCCAGTGGGTTTaGATCAATACAATCACCCCA +
Preference number: 3 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTPSQWV*INTITP
Trigger: TGGGGTGATTGTATTGATCAAAACCCACTGGGAAGG...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR CCA 72 bp CTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTaGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTT +
Preference number: 3 (lower is better)
Translates to: LEERNPGHGGDP*PRCSRWWHPEL
Trigger: AAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CAA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCCTTCCCAGTGGGTTTaGATCAATACAATCACCCCA +
Preference number: 3 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFPSQWV*INTITP
Trigger: TGGGGTGATTGTATTGATCAAAACCCACTGGGAAGG...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
3UTR-3UTR CAA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCAAGGCGGCAAACTCTTaGTCCTTCCCAGTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLKAANS*SFPVGF
Trigger: AAAACCCACTGGGAAGGACAAAGAGTTTGCCGCCTT...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACTGGGCGTGGCCGGAGTaGTGCAGGCAAGCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHWAWPE*CRQARG
Trigger: GCCCCGCGCTTGCCTGCAGCACTCCGGCCACGCCCA...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCGAGCAGAAACGCCGCTaGGGCTCCCGCTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GAARRTQMDACFGCGGRGEQKRR*GSRLGR
Trigger: CCGGCCCAAGCGGGAGCCGCAGCGGCGTTTCTGCTC...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTCGGGGCGATGGGTGCTaGTCGGGCTGGCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLPGGHRWTPASGVEGEARGDGC*SGWRVL
Trigger: GAGGACCCGCCAGCCCGAGCAGCACCCATCGCCCCG...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAATGAGCTGGTCGTGCTaGAGCAGCGCCGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: LTSAPESGWGPWCCWAGPMSWSC*SSAGTS
Trigger: GGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCAT...TGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTCCGGGGCCCTCGCTCTaGACTGAGCCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GLPGGHRWTPASGVEGEAPGPSL*TEPLEG
Trigger: TCCCTCCAGGGGCTCAGTGCAGAGCGAGGGCCCCGG...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACCGGATGAGCTGGTCGTaGTGCAGCAGCGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHRMSWS*CSSAGT
Trigger: CGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCG...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACACGGATTCTGACGTCTaGCCCCGAGAGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHTDSDV*PREWLG
Trigger: CCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGT...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTGCCCCCGAGAGTGGCTaGGGTCCGTGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRAPESG*GPWCCW
Trigger: CCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGC...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACTCCTCAGCTGGGCTCTaGGGCCCACTCAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHSSAGL*GPLRGL
Trigger: CAGACCTCTGAGTGGGCCCCAGAGCCCAGCTGAGGA...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATCATCGAAGCGGGTGGTaGCGTCCGCTGCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYHRSGW*RPLRWS
Trigger: GCTCCAGCGCAGCGGACGTCACCACCCGCTTCGATG...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTCATCGAAGCGGGTGGTaGCGTCCGCTGCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GLPGGHRWTPASGVEGEAHRSGW*RPLRWS
Trigger: GCTCCAGCGCAGCGGACGTCACCACCCGCTTCGATG...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAGAGCAGAAACGCCGCTaGGGCTCCCGCTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTEQKRR*GSRLGR
Trigger: CCGGCCCAAGCGGGAGCCGCAGCGGCGTTTCTGCTC...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGGAGGTTCGGGGAGCTaGTGGCCACCCCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHGGSGS*WPPQRE
Trigger: CTCTCTCTGGGGTGGCCAGCAGCTCCCCGAACCTCC...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGGGGCGTCCACGACTGTaGGCCCGCCACTCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWGRPRL*ARHSGG
Trigger: TCCGCCTGAGTGGCGGGCGCACAGTCGTGGACGCCC...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATGCGGGCACCCCTGGCTaGGCTCGCAGACTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYAGTPG*ARRLRS
Trigger: ACTTCGGAGTCTGCGAGCCCAGCCAGGGGTGCCCGC...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACCCGGGAAGCTGTCCTTaGAGCGTCCTCCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHPGSCP*SVLPSG
Trigger: GCCGGAAGGGAGGACGCTCCAAGGACAGCTTCCCGG...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGCCTCGCCGCTGGGCGTaGCCGGAGTGCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWPRRWA*PECCRQ
Trigger: TTGCCTGCAGCACTCCGGCCACGCCCAGCGGCGAGG...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACGCTTCCAGGTCCTCCTaGCTGCCTCGAAAACGCCTC +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHASRSS*LPRKRL
Trigger: GAGGCGTTTTCGAGGCAGCCAGGAGGACCTGGAAGC...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCACCATACACAGGGCGGTaGTCGGACGTCTTGATCCCG +
Preference number: 4 (lower is better)
Translates to: LTSAPESGWGPWCCWAGPPYTGR*SDVLIP
Trigger: CGGGATCAAGACGTCCGACCACCGCCCTGTGTATGG...TGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGCGTGGCCGGAGTGCTaGAGGCAAGCGCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLAWPEC*RQARGS
Trigger: AGAGCCCCGCGCTTGCCTGCAGCACTCCGGCCACGC...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGCGTGGCCGGAGTGCTaGAGGCAAGCGCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEAWPEC*RQARGS
Trigger: AGAGCCCCGCGCTTGCCTGCAGCACTCCGGCCACGC...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGCCGGGGCCCTCGCTCTaGACTGAGCCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEPGPSL*TEPLEG
Trigger: TCCCTCCAGGGGCTCAGTGCAGAGCGAGGGCCCCGG...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACACGGGGGTCCAAGCCCTaGCCACCCACACCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTRGSKP*PPTPCG
Trigger: TCCACACGGTGTGGGTGGGCAGGGCTTGGACCCCCG...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCATGCTGTATGGACCTaGCATGGAGACGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHHAVWT*HGDGGP
Trigger: TGGACCCCCGTCTCCATGGCAGGTCCATACAGCATG...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAAGCGGGCACCCCTaGCTGGGCTCGCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEGSGHP*LGSQTP
Trigger: CGGAGTCTGCGAGCCCAGCCAGGGGTGCCCGCTTCC...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGGAAGCGGGCACCCCTaGCTGGGCTCGCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGGSGHP*LGSQTP
Trigger: CGGAGTCTGCGAGCCCAGCCAGGGGTGCCCGCTTCC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACGAGACACGATGCGTGTaGTCACCGTGGAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHETRCV*SPWSTP
Trigger: TGGAGTGCTCCACGGTGACCACACGCATCGTGTCTC...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGTCCACCACCAGGCCCTaGCACAGGAGGGCGTCCACG +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWSTTRP*HRRAST
Trigger: CGTGGACGCCCTCCTGTGCCAGGGCCTGGTGGTGGA...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAGTCTGCCCCCGAGAGTaGCTGGGGTCCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTVCPRE*LGSVVL
Trigger: CAGCACCACGGACCCCAGCCACTCTCGGGGGCAGAC...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACTGTGGAGGGAGAGGCTaGTGCAGAGCACGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHCGGRG*CRARGC
Trigger: ACACCCCCGTGCTCTGCACCAGCCTCTCCCTCCACA...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGCCCTCGCTCTGCACTaGGCCCCTGGAGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGALALH*APGGTG
Trigger: ACCAGTCCCTCCAGGGGCTCAGTGCAGAGCGAGGGC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTGACGCGGTCCGTGTATaGGGGCGTCCTCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRDAVRV*GRPLLG
Trigger: TCCAAGCAGAGGACGCCCTCATACACGGACCGCGTC...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp CTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCACTCTGGATACCCGTGTaGCATGGGGTGGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LTSAPESGWGPWCCWAGPLWIPV*HGVVCV
Trigger: AACACACACCACCCCATGTCACACGGGTATCCAGAG...TGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTCCAGGTCCTCCTGGCTaGCTCGAAAACGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRPGPPG*LENASS
Trigger: GGAGGAGGCGTTTTCGAGGCAGCCAGGAGGACCTGG...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAGGCTCCCTCTCTCACTaGTCAGGACCCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTGSLSH*SGPRGT
Trigger: AGTCCCGCGGGGTCCTGAGCAGTGAGAGAGGGAGCC...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCAGGTGGCCACGAAGAGTaGCACGTTCCGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPGGHEE*HVPVWE
Trigger: TTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACC...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACTCCTCTGCTTGGAGGTaGTGTCGTACGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHSSAWR*CRTCPS
Trigger: GGAAGGACACGTACGACAGCACCTCCAAGCAGAGGA...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTGCTGCGGCTCCCGCTTaGGCCGGGGATGGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPAAAPA*AGDGRG
Trigger: TCCGCGACCATCCCCGGCCCAAGCGGGAGCCGCAGC...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTCTGCACTGAGCCCCTaGAGGGACTGGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GAARRTQMDACFGCGGRGSALSP*RDWSHS
Trigger: GGAATGGGACCAGTCCCTCCAGGGGCTCAGTGCAGA...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATTGCCACGTTCCGGTCTaGGAAGTAGCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYCHVPV*EVAGQL
Trigger: GAGCTGGCCCGCTACTTCCCAGACCGGAACGTGGCA...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACTGCGTGTGGTCACCGTaGAGCACTCCACCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHCVWSP*STPPLS
Trigger: GCTCAGAGGTGGAGTGCTCCACGGTGACCACACGCA...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATATCTCCCGGATGAGCTaGTCGTGCTGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYISRMS*SCCSSA
Trigger: GGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGAT...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTGTATGGACCTGCCATaGAGACGGGGGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GAARRTQMDACFGCGGRGCMDLP*RRGSKP
Trigger: GGGCTTGGACCCCCGTCTCCATGGCAGGTCCATACA...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGGGGAGGCCCTTATACTaGGGTGCAGGCCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWGRPLY*GAGLLA
Trigger: GGCGAGGAGGCCTGCACCCCAGTATAAGGGCCTCCC...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAGGGAGGCCCTTATACTaGGGTGCAGGCCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTGRPLY*GAGLLA
Trigger: GGCGAGGAGGCCTGCACCCCAGTATAAGGGCCTCCC...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAAGCCCTCGCTCTGCACTaGGCCCCTGGAGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEALALH*APGGTG
Trigger: ACCAGTCCCTCCAGGGGCTCAGTGCAGAGCGAGGGC...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATCCTCCTGGACCCCGATaGCATACAGGTCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYPPGPR*HTGPGH
Trigger: ATGCCCAGGACCTGTATGTCATCGGGGTCCAGGAGG...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGCTCCCTCTCTCACTaGTCAGGACCCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLGSLSH*SGPRGT
Trigger: AGTCCCGCGGGGTCCTGAGCAGTGAGAGAGGGAGCC...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGCGCTGGCCAGGAGGCTaGCCTCCAGGTAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFEGLPGGHRWTPASGVERWPGG*PPGNSC
Trigger: GCAGGAGTTACCTGGAGGGCAGCCTCCTGGCCAGCG...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGGGCCCAGCGTCTCCTaGAGACGAGTCTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGGPSVS*RRVSHS
Trigger: GGAGTGGGAGACTCGTCTGCAGGAGACGCTGGGCCC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371712.4
CDS-3UTR GCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAAGGCTGGGGTCCGTGGTaGTGCTGGGCGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEGWGPW*CWAGPN
Trigger: GTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCC...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCAACACAGATGGACGCCTaGTTCGGGTGTGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPTQMDA*FGCGGR
Trigger: TCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGT...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACCCGGGAAGCTGTCCTTaGAGCGTCCTCCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDPGSCP*SVLPSG
Trigger: GCCGGAAGGGAGGACGCTCCAAGGACAGCTTCCCGG...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTCCTCGCCGCTGGGCGTaGCCGGAGTGCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPPRRWA*PECCRQ
Trigger: TTGCCTGCAGCACTCCGGCCACGCCCAGCGGCGAGG...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAATCTCCCGGATGAGCTaGTCGTGCTGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTISRMS*SCCSSA
Trigger: GGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGAT...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCAAGGGCGTCCTCTGCTTaGAGGTGCTGTCGTACGTGT +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPRASSA*RCCRTC
Trigger: ACACGTACGACAGCACCTCCAAGCAGAGGACGCCCT...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATCCATACACAGGGCGGTaGTCGGACGTCTTGATCCCG +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYPYTGR*SDVLIP
Trigger: CGGGATCAAGACGTCCGACCACCGCCCTGTGTATGG...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACTCCTTCCTGGGACGCTaGCACAGAGGCACGGTCGCC +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDSFLGR*HRGTVA
Trigger: GGCGACCGTGCCTCTGTGCCAGCGTCCCAGGAAGGA...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTGGTCCGTGGTGCTGCTaGGCGGGTCCAAACCCTGCC +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLGPWCC*AGPNPA
Trigger: GGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACC...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACATCCTCAGCTGGGCTCTaGGGCCCACTCAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTSSAGL*GPLRGL
Trigger: CAGACCTCTGAGTGGGCCCCAGAGCCCAGCTGAGGA...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTTGGGCGCCAGGAGGCTaGAGGAGGATTTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLWAPGG*RRIWPS
Trigger: GCTCGGCCAAATCCTCCTTCAGCCTCCTGGCGCCCA...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCCCCTTGGTCTTGATCTaGGACACGATGCGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GAARRTQMDACFGCGGRGPLVLI*DTMRVV
Trigger: GACCACACGCATCGTGTCTCAGATCAAGACCAAGGG...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACCCACGTTGCAGCTGTaGGTCCTCGTTCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPPTLQL*VLVQQT
Trigger: AGTTTGCTGAACGAGGACTCACAGCTGCAACGTGGG...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTCGGGGCGATGGGTGCTaGTCGGGCTGGCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPRGDGC*SGWRVL
Trigger: GAGGACCCGCCAGCCCGAGCAGCACCCATCGCCCCG...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGGGTGGCCACGAAGAGTaGCACGTTCCGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWGGHEE*HVPVWE
Trigger: TTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACC...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCACACCGTGTGGACCTaGCACAGAGGACAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGHTVWT*HRGQAR
Trigger: GCGAGCCTGTCCTCTGTGGCAGGTCCACACGGTGTG...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCAAAACCCTGCCACCCATaGTGTATGGACCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPKPCHP*CMDLPW
Trigger: CCATGGCAGGTCCATACAGCATGGGTGGCAGGGTTT...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAGGCGGGTCCAAACCCTaGCACCCATGCTGTATGGAC +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTGGSKP*HPCCMD
Trigger: GTCCATACAGCATGGGTGGCAGGGTTTGGACCCGCC...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACACGGATTCTGACGTCTaGCCCCGAGAGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDTDSDV*PREWLG
Trigger: CCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGT...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATGCCCAGATCCAGCCTTaGTCTGGATACCCGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYAQIQP*SGYPCD
Trigger: GTCACACGGGTATCCAGAGCAAGGCTGGATCTGGGC...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGCCCTTATACTGGGGTaGAGGCCTCCTCGCCCCATG +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLALILG*RPPRPM
Trigger: CATGGGGCGAGGAGGCCTGCACCCCAGTATAAGGGC...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTCCGCCTTGGACGGCATaGACGGTCTCTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPPPWTA*TVSPGA
Trigger: TGCCCCGGGAGAGACCGTCCATGCCGTCCAAGGCGG...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTTGCCACGTTCCGGTCTaGGAAGTAGCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGCHVPV*EVAGQL
Trigger: GAGCTGGCCCGCTACTTCCCAGACCGGAACGTGGCA...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTCCTGCATGTTCCAGGTaGCCACGAAGAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRPACSR*PRRVPR
Trigger: ACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGG...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTGTCGGGCACATTTCTaGGCAGGACCAGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GAARRTQMDACFGCGGRGCRAHF*AGPGLV
Trigger: TACAAGCCCTGGTCCTGCCCAGAAATGTGCCCGACA...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTTCCACCACCAGGCCCTaGCACAGGAGGGCGTCCACG +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPSTTRP*HRRAST
Trigger: CGTGGACGCCCTCCTGTGCCAGGGCCTGGTGGTGGA...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACTGGATGTCCGGCTCCTaGAAGCCCTTGAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHWMSGS*KPLKMD
Trigger: GTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCA...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATAGGGCGTCCTCTGCTTaGAGGTGCTGTCGTACGTGT +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYRASSA*RCCRTC
Trigger: ACACGTACGACAGCACCTCCAAGCAGAGGACGCCCT...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACATGTATGGACCTGCCATaGAGACGGGGGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTCMDLP*RRGSKP
Trigger: GGGCTTGGACCCCCGTCTCCATGGCAGGTCCATACA...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAGTCCTGGAGGCTGTGTaGCTTCCTCAGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTVLEAV*LPQLGS
Trigger: AGAGCCCAGCTGAGGAAGCCACACAGCCTCCAGGAC...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGAACCGTGCCACGTCCTaGAGGCTGTGTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWNRATS*RLCGFL
Trigger: GAGGAAGCCACACAGCCTCCAGGACGTGGCACGGTT...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCTAGGTGTTCAAGGTaGTGGCATCCTGAACTTCCA +
Preference number: 4 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHPRCSR*WHPELP
Trigger: TGGAAGTTCAGGATGCCACCACCTTGAACACCTAGG...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAATCCGCATCTCCCGGATaGGCTGGTCGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPESASPG*AGRAAA
Trigger: TGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGA...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTGGTGGTCGGACGTCTTaGTCCCGGGGCAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLGGRTS*SRGRKS
Trigger: ACTCTTCCTGCCCCGGGATCAAGACGTCCGACCACC...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATCCCACGTTGCAGCTGTaGGTCCTCGTTCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYPTLQL*VLVQQT
Trigger: AGTTTGCTGAACGAGGACTCACAGCTGCAACGTGGG...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTCGAGTCGACCTTGTTTaGTGTCCTCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRRVDLV*CPQGVG
Trigger: TCCGACTCCCTGAGGACAGCAAACAAGGTCGACTCG...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCAGGTAACTCCTGCTaGGGACGTCCTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGPGNSC*GRPCCG
Trigger: TCCGCAGCAAGGACGTCCGCAGCAGGAGTTACCTGG...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTGTGTGTTTGAGGGGCTaGCAGGAGGACACAGATGGA +
Preference number: 4 (lower is better)
Translates to: GLPGGHRWTPASGVEGEAVCLRG*QEDTDG
Trigger: TCCATCTGTGTCCTCCTGGCAGCCCCTCAAACACAC...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAAAGTGGAGGGGAACCGTaGCACGTCCTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPESGGEP*HVLEAV
Trigger: CACAGCCTCCAGGACGTGGCACGGTTCCCCTCCACT...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGCCATGGCAGGCGACTTaGAGCCAAGTGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLPWQAT*SQVEGN
Trigger: GTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGG...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGTCTGCACTGAGCCCCTaGAGGGACTGGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLSALSP*RDWSHS
Trigger: GGAATGGGACCAGTCCCTCCAGGGGCTCAGTGCAGA...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAAGGACCCCGCGGGACTTaGGGATTTCCTGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEGPRGT*GFPARR
Trigger: CCTCCTTGCAGGAAATCCCCAAGTCCCGCGGGGTCC...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGCCACCCATGCTGTATaGACCTGCCATGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLATHAV*TCHGDG
Trigger: CCCGTCTCCATGGCAGGTCCATACAGCATGGGTGGC...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAATGTGGAGGGAGAGGCTaGTGCAGAGCACGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPECGGRG*CRARGC
Trigger: ACACCCCCGTGCTCTGCACCAGCCTCTCCCTCCACA...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGCCAGGAGGACACAGATaGACGCCTGCTTCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEPGGHR*TPASGV
Trigger: CACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGG...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGCCGTGTGACATGGGGTaGTGTGTGTTTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWPCDMG*CVFEGL
Trigger: CAGCCCCTCAAACACACACCACCCCATGTCACACGG...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCAGATACCCGTGTGACATaGGGTGGTGTGTGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPDTRVT*GGVCLR
Trigger: CCTCAAACACACACCACCCCATGTCACACGGGTATC...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACCGACTTGCAGCCAAGTaGAGGGGAACCGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDRLAAK*RGTVPR
Trigger: ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCG...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGCATGGTGGGGATCCCTaGCCTAGGTGTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWHGGDP*PRCSRW
Trigger: CCACCTTGAACACCTAGGCCAGGGATCCCCACCATG...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACACTCAGGCGGAAGTTaGAGTCTCCAAACCAGAACA +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPHSGGS*SLQTRT
Trigger: TGTTCTGGTTTGGAGACTTCAACTTCCGCCTGAGTG...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGCTCCTGGAAGCCCTTaGAGATGGACCCTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGAPGSP*RWTLSA
Trigger: TGCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACACTGAGCAGAACCAGATaGGGTCCCTGTCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTLSRTR*GPCQNS
Trigger: GCTGTTCTGACAGGGACCTCATCTGGTTCTGCTCAG...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676019.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTCGGATGAGCTGGTCGTaGTGCAGCAGCGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPRMSWS*CSSAGT
Trigger: CGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCG...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTACAATCACCCCACGTTaGAGCTGTGAGTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRTITPR*SCESSF
Trigger: GAACGAGGACTCACAGCTGCAACGTGGGGTGATTGT...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTGGCTGGGGTCCGTGGTaGTGCTGGGCGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSGWGPW*CWAGPN
Trigger: GTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCC...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTGCCCTTATACTGGGGTaGAGGCCTCCTCGCCCCATG +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPALILG*RPPRPM
Trigger: CATGGGGCGAGGAGGCCTGCACCCCAGTATAAGGGC...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTATAGTCGGCCTCGGCTaGGAGCAGGAACTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLIVGLG*EQELVQ
Trigger: CTGGACGAGTTCCTGCTCCCAGCCGAGGCCGACTAT...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACATGGAGCGATAGGGGTTaGTGTCGGGCACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTWSDRG*CRAHFW
Trigger: CCAGAAATGTGCCCGACACCAACCCCTATCGCTCCA...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCCCACCCACACCGTGTaGACCTGCCACAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: ERNPGHGGDPWPRCSRWWPTHTV*TCHRGQ
Trigger: CTGTCCTCTGTGGCAGGTCCACACGGTGTGGGTGGG...CCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAAGCCACCCATGCTGTATaGACCTGCCATGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEATHAV*TCHGDG
Trigger: CCCGTCTCCATGGCAGGTCCATACAGCATGGGTGGC...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTCGACTTGCAGCCAAGTaGAGGGGAACCGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLRLAAK*RGTVPR
Trigger: ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCG...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTCACTCAGGCGGAAGTTaGAGTCTCCAAACCAGAACA +
Preference number: 4 (lower is better)
Translates to: GLPGGHRWTPASGVEGEAHSGGS*SLQTRT
Trigger: TGTTCTGGTTTGGAGACTTCAACTTCCGCCTGAGTG...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGACTTGGGGATTTCCTaGAAGGAGGTGCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDDLGIS*KEVLRQ
Trigger: CTGCCTGAGCACCTCCTTGCAGGAAATCCCCAAGTC...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCGAGTCGACCTTGTTTaGTGTCCTCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGRVDLV*CPQGVG
Trigger: TCCGACTCCCTGAGGACAGCAAACAAGGTCGACTCG...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACTATGAGGGCGTCCTCTaGTTGGAGGTGCTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDYEGVL*LEVLSY
Trigger: GTACGACAGCACCTCCAAGCAGAGGACGCCCTCATA...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGGGGGTCCAAGCCCTaGCCACCCACACCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFRGSKP*PPTPCG
Trigger: TCCACACGGTGTGGGTGGGCAGGGCTTGGACCCCCG...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACAAACCCTGCCACCCATaGTGTATGGACCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDKPCHP*CMDLPW
Trigger: CCATGGCAGGTCCATACAGCATGGGTGGCAGGGTTT...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGTGTGTTTGAGGGGCTaGCAGGAGGACACAGATGGA +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGVCLRG*QEDTDG
Trigger: TCCATCTGTGTCCTCCTGGCAGCCCCTCAAACACAC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCCATGGCAGGCGACTTaGAGCCAAGTGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ERNPGHGGDPWPRCSRWWPWQAT*SQVEGN
Trigger: GTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGG...CCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACTGGATGTCCGGCTCCTaGAAGCCCTTGAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDWMSGS*KPLKMD
Trigger: GTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCA...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp CTGACGTCTGCCCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAGACGGTTTCAAAAATaGTCTACGTCACCAAGACCA +
Preference number: 4 (lower is better)
Translates to: LTSAPESGWGPWCCWAGPRRFQK*STSPRP
Trigger: TGGTCTTGGTGACGTAGACCATTTTTGAAACCGTCT...TGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGCAGACGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTCCCTTGGTCTTGATCTaGGACACGATGCGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLPLVLI*DTMRVV
Trigger: GACCACACGCATCGTGTCTCAGATCAAGACCAAGGG...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTTCCGCATCTCCCGGATaGGCTGGTCGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSSASPG*AGRAAA
Trigger: TGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGA...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTGGTGGTCGGACGTCTTaGTCCCGGGGCAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSGGRTS*SRGRKS
Trigger: ACTCTTCCTGCCCCGGGATCAAGACGTCCGACCACC...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTCCAGGTCCTCCTGGCTaGCTCGAAAACGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSPGPPG*LENASS
Trigger: GGAGGAGGCGTTTTCGAGGCAGCCAGGAGGACCTGG...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCGGAGGTTCGGGGAGCTaGTGGCCACCCCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFGGSGS*WPPQRE
Trigger: CTCTCTCTGGGGTGGCCAGCAGCTCCCCGAACCTCC...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGCGGAGCTTGTAGTCTaGAAGATCCGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGAELVV*KIRVDL
Trigger: AAGGTCGACTCGGATCTTGCAGACTACAAGCTCCGC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTTATGAGGGCGTCCTCTaGTTGGAGGTGCTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLYEGVL*LEVLSY
Trigger: GTACGACAGCACCTCCAAGCAGAGGACGCCCTCATA...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCAATCAAATTTGCCAGCTaGCAACGGAATGTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: ASSPHGRRLAAKWRGTVPIKFAS*QRNVVS
Trigger: CGAGACAACATTCCGTTGGCAGCTGGCAAATTTGAT...TGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCTAAACGGAGCAGATGGTaGTGGAGTTCTGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: GLPGGHRWTPASGVEGEAKRSRW*WSSDSV
Trigger: TACAGAGTCAGAACTCCAGCACCATCTGCTCCGTTT...AGCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTACACAGATGGACGCCTaGTTCGGGTGTGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPTQMDA*FGCGGR
Trigger: TCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGT...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTAGTGGAGGGGAACCGTaGCACGTCCTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPSGGEP*HVLEAV
Trigger: CACAGCCTCCAGGACGTGGCACGGTTCCCCTCCACT...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTGCAGATTCTCCGCCTTaGACGGCATGGACGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPADSPP*TAWTVS
Trigger: AGAGACCGTCCATGCCGTCCAAGGCGGAGAATCTGC...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCGGTTCGGGGAGCTGCTaGCCACCCCAGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFGSGSC*PPQREG
Trigger: ACCCTCTCTCTGGGGTGGCCAGCAGCTCCCCGAACC...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGTATGATGGGAGGAAGTaGATGTCCGGCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLYDGRK*MSGSWK
Trigger: CTTCCAGGAGCCGGACATCCACTTCCTCCCATCATA...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGCAGATGTCACCCTTGTaGCGGCTTCTGTACAAGACG +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLQMSPL*RLLYKT
Trigger: CGTCTTGTACAGAAGCCGCCACAAGGGTGACATCTG...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTCAGATGTCACCCTTGTaGCGGCTTCTGTACAAGACG +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGQMSPL*RLLYKT
Trigger: CGTCTTGTACAGAAGCCGCCACAAGGGTGACATCTG...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGCCCCCGAGAGTGGCTaGGGTCCGTGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTAPESG*GPWCCW
Trigger: CCAGCAGCACCACGGACCCCAGCCACTCTCGGGGGC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTCTCAGGAACGGATTCTaGCGTCTGCCCCCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPLRNGF*RLPPRV
Trigger: CACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAG...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCTCTGGATACCCGTGTaGCATGGGGTGGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: ERNPGHGGDPWPRCSRWWLWIPV*HGVVCV
Trigger: AACACACACCACCCCATGTCACACGGGTATCCAGAG...CCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTGCGGAGCTTGTAGTCTaGAAGATCCGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLAELVV*KIRVDL
Trigger: AAGGTCGACTCGGATCTTGCAGACTACAAGCTCCGC...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTATCAAATTTGCCAGCTaGCAACGGAATGTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRIKFAS*QRNVVS
Trigger: CGAGACAACATTCCGTTGGCAGCTGGCAAATTTGAT...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCGCGGGCACCCCTGGCTaGGCTCGCAGACTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSAGTPG*ARRLRS
Trigger: ACTTCGGAGTCTGCGAGCCCAGCCAGGGGTGCCCGC...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCAGCCCCTGGAGGGACTaGTCCCATTCCGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGSPWRD*SHSGLP
Trigger: TGGAAGCCCGGAATGGGACCAGTCCCTCCAGGGGCT...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCGGACCCCGCGGGACTTaGGGATTTCCTGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFGPRGT*GFPARR
Trigger: CCTCCTTGCAGGAAATCCCCAAGTCCCGCGGGGTCC...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTCGGAGCAGATGGTGCTaGAGTTCTGACTCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLRSRWC*SSDSVV
Trigger: CACTACAGAGTCAGAACTCCAGCACCATCTGCTCCG...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCCCACCCACACCGTGTaGACCTGCCACAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGPTHTV*TCHRGQ
Trigger: CTGTCCTCTGTGGCAGGTCCACACGGTGTGGGTGGG...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCTGGGCGCCAGGAGGCTaGAGGAGGATTTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSWAPGG*RRIWPS
Trigger: GCTCGGCCAAATCCTCCTTCAGCCTCCTGGCGCCCA...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTGCTCCTGGAAGCCCTTaGAGATGGACCCTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSAPGSP*RWTLSA
Trigger: TGCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGC...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTAAGGTGGTGGCATCCTaGACTTCCAGCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: EAASYSAGEALILGCRPPKVVAS*TSSSSL
Trigger: TAGGGAACTGCTGGAAGTTCAGGATGCCACCACCTT...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCCAGGTAACTCCTGCTaGGGACGTCCTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGPGNSC*GRPCCG
Trigger: TCCGCAGCAAGGACGTCCGCAGCAGGAGTTACCTGG...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCATGAGCTGGTCGTGCTaGAGCAGCGCCGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTMSWSC*SSAGTS
Trigger: GGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCAT...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCTGGGGTCCGTGGTGCTaGTGGGCGGGTCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSWGPWC*WAGPNP
Trigger: AGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCA...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCGCTTCCAGGTCCTCCTaGCTGCCTCGAAAACGCCTC +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGASRSS*LPRKRL
Trigger: GAGGCGTTTTCGAGGCAGCCAGGAGGACCTGGAAGC...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCGGTTCGGGGAGCTGCTaGCCACCCCAGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSGSGSC*PPQREG
Trigger: ACCCTCTCTCTGGGGTGGCCAGCAGCTCCCCGAACC...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCTGCGTGTGGTCACCGTaGAGCACTCCACCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGCVWSP*STPPLS
Trigger: GCTCAGAGGTGGAGTGCTCCACGGTGACCACACGCA...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTGAGACACGATGCGTGTaGTCACCGTGGAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPETRCV*SPWSTP
Trigger: TGGAGTGCTCCACGGTGACCACACGCATCGTGTCTC...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTGGGCTTGTACAGTCCTaGTGTAGTCCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSGLVQS*CSPAAA
Trigger: AGCGGCTGCTGGACTACACCAGGACTGTACAAGCCC...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGGCCTCCTCGCCCCATaGCAGGCGACTTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTGLLAP*QATCSQ
Trigger: TTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGGCC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGACGCGGTCCGTGTATaGGGGCGTCCTCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTDAVRV*GRPLLG
Trigger: TCCAAGCAGAGGACGCCCTCATACACGGACCGCGTC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp CTCAGAGGTCTGAGGCCCCAGGGGTCACCTAGCCCAGATCCAGCCTTGCTCTGGGTTCTCTATCAAATTTaGCAGCTGCCAACGGAATGT +
Preference number: 4 (lower is better)
Translates to: LRGLRPQGSPSPDPALLWVLYQI*QLPTEC
Trigger: ACATTCCGTTGGCAGCTGGCAAATTTGATAGAGAAC...CCAGAGCAAGGCTGGATCTGGGCTAGGTGACCCCTGGGGCCTCAGACCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACAGTTCTCTATCAAATTTaGCAGCTGCCAACGGAATGT +
Preference number: 4 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTVLYQI*QLPTEC
Trigger: ACATTCCGTTGGCAGCTGGCAAATTTGATAGAGAAC...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCATGCTGTATGGACCTaGCATGGAGACGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFHAVWT*HGDGGP
Trigger: TGGACCCCCGTCTCCATGGCAGGTCCATACAGCATG...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCAGCCCCTGGAGGGACTaGTCCCATTCCGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTSPWRD*SHSGLP
Trigger: TGGAAGCCCGGAATGGGACCAGTCCCTCCAGGGGCT...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTCTTTGTCCTTCCCAGTaGGTTTTGATCAATACAATC +
Preference number: 4 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRLCPSQ*VLINTI
Trigger: GATTGTATTGATCAAAACCCACTGGGAAGGACAAAG...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCATGGTGGGGATCCCTaGCCTAGGTGTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGHGGDP*PRCSRW
Trigger: CCACCTTGAACACCTAGGCCAGGGATCCCCACCATG...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCCTCAGGAACGGATTCTaGCGTCTGCCCCCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSLRNGF*RLPPRV
Trigger: CACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAG...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGACACAAAGCAAGAATaGACGGTTCTATACTCTCGA +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGDTKQE*TVLYSR
Trigger: TCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp ACCGTGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGACACAAAGCAAGAATaGACGGTTCTATACTCTCGA +
Preference number: 4 (lower is better)
Translates to: TVWTCHRGQARSGLASFLDTKQE*TVLYSR
Trigger: TCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTC...CAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACCGCTGGCCAGGAGGCTaGCCTCCAGGTAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDRWPGG*PPGNSC
Trigger: GCAGGAGTTACCTGGAGGGCAGCCTCCTGGCCAGCG...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCAGCTCCTTCTGGCCCTaGATGTTCCAGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTSSFWP*MFQVAT
Trigger: CGTGGCCACCTGGAACATGCAGGGCCAGAAGGAGCT...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACTGGGGTCCGTGGTGCTaGTGGGCGGGTCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDWGPWC*WAGPNP
Trigger: AGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCA...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCAACCGTGCCACGTCCTaGAGGCTGTGTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSNRATS*RLCGFL
Trigger: GAGGAAGCCACACAGCCTCCAGGACGTGGCACGGTT...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCTTCTTACTCAGCTaGGGAGGCCCTTATACTGGG +
Preference number: 4 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPSFLLS*GGPYTG
Trigger: CCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCT...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGACCAAGACCATGAGATaGTTTCACACAATAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VFEGLPGGHRWTPASGVETKTMR*FHTIGL
Trigger: CAAGCCTATTGTGTGAAACCATCTCATGGTCTTGGT...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTACCAAGACCATGAGATaGTTTCACACAATAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TGAAQERILTSAPESGWGTKTMR*FHTIGL
Trigger: CAAGCCTATTGTGTGAAACCATCTCATGGTCTTGGT...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCGCAGATTCTCCGCCTTaGACGGCATGGACGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTADSPP*TAWTVS
Trigger: AGAGACCGTCCATGCCGTCCAAGGCGGAGAATCTGC...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCGGAGCAGATGGTGCTaGAGTTCTGACTCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGRSRWC*SSDSVV
Trigger: CACTACAGAGTCAGAACTCCAGCACCATCTGCTCCG...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCCCGTGTGACATGGGGTaGTGTGTGTTTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSPCDMG*CVFEGL
Trigger: CAGCCCCTCAAACACACACCACCCCATGTCACACGG...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCAGCTTCTTACTCAGCTaGGGAGGCCCTTATACTGGG +
Preference number: 4 (lower is better)
Translates to: NGSILSKKETRDMVGIPGSFLLS*GGPYTG
Trigger: CCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCT...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCGGGCGTCCACGACTGTaGGCCCGCCACTCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLGRPRL*ARHSGG
Trigger: TCCGCCTGAGTGGCGGGCGCACAGTCGTGGACGCCC...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACTTCCAGCAGTTCCCTAAACGGAGCAGATGGTaGTGGAGTTCTGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: IPGLGVQGGGILNFQQFPKRSRW*WSSDSV
Trigger: TACAGAGTCAGAACTCCAGCACCATCTGCTCCGTTT...AGGGAACTGCTGGAAGTTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTAAGAAACGGAGCAGATaGTGCTGGAGTTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSKKRSR*CWSSDS
Trigger: AGAGTCAGAACTCCAGCACCATCTGCTCCGTTTCTT...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACGTCCTGGAGGCTGTGTaGCTTCCTCAGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDVLEAV*LPQLGS
Trigger: AGAGCCCAGCTGAGGAAGCCACACAGCCTCCAGGAC...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCCTAGGTGTTCAAGGTaGTGGCATCCTGAACTTCCA +
Preference number: 4 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFPRCSR*WHPELP
Trigger: TGGAAGTTCAGGATGCCACCACCTTGAACACCTAGG...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCACAATCACCCCACGTTaGAGCTGTGAGTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSTITPR*SCESSF
Trigger: GAACGAGGACTCACAGCTGCAACGTGGGGTGATTGT...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCCCGCCTTGGACGGCATaGACGGTCTCTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLPPWTA*TVSPGA
Trigger: TGCCCCGGGAGAGACCGTCCATGCCGTCCAAGGCGG...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACCCTGCATGTTCCAGGTaGCCACGAAGAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDPACSR*PRRVPR
Trigger: ACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGG...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTCACACAATAGGCTTGGCCTATGAGAGGAGGGGAAGCAGCTTCTTACTCAGCGATACCCGTGTGACATaGGGTGGTGTGTGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: FHTIGLAYERRGSSFLLSDTRVT*GGVCLR
Trigger: CCTCAAACACACACCACCCCATGTCACACGGGTATC...GCTGAGTAAGAAGCTGCTTCCCCTCCTCTCATAGGCCAAGCCTATTGTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACGACTTGGGGATTTCCTaGAAGGAGGTGCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDDLGIS*KEVLRQ
Trigger: CTGCCTGAGCACCTCCTTGCAGGAAATCCCCAAGTC...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACTGTCGGGCACATTTCTaGGCAGGACCAGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDCRAHF*AGPGLV
Trigger: TACAAGCCCTGGTCCTGCCCAGAAATGTGCCCGACA...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACTGGAGCGATAGGGGTTaGTGTCGGGCACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDWSDRG*CRAHFW
Trigger: CCAGAAATGTGCCCGACACCAACCCCTATCGCTCCA...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACTATGATGGGAGGAAGTaGATGTCCGGCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDYDGRK*MSGSWK
Trigger: CTTCCAGGAGCCGGACATCCACTTCCTCCCATCATA...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCAAGAAACGGAGCAGATaGTGCTGGAGTTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTKKRSR*CWSSDS
Trigger: AGAGTCAGAACTCCAGCACCATCTGCTCCGTTTCTT...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCAGCTCCTTCTGGCCCTaGATGTTCCAGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLSSFWP*MFQVAT
Trigger: CGTGGCCACCTGGAACATGCAGGGCCAGAAGGAGCT...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCGGCGGGTCCAAACCCTaGCACCCATGCTGTATGGAC +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLGGSKP*HPCCMD
Trigger: GTCCATACAGCATGGGTGGCAGGGTTTGGACCCGCC...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCATAGTCGGCCTCGGCTaGGAGCAGGAACTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLIVGLG*EQELVQ
Trigger: CTGGACGAGTTCCTGCTCCCAGCCGAGGCCGACTAT...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCCCAGGGCACAGGAGCTaGTCAGGAACGGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLPGHRS*SGTDSD
Trigger: GTCAGAATCCGTTCCTGAGCAGCTCCTGTGCCCTGG...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCGGGCTTGTACAGTCCTaGTGTAGTCCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLGLVQS*CSPAAA
Trigger: AGCGGCTGCTGGACTACACCAGGACTGTACAAGCCC...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCAGACGGTTTCAAAAATaGTCTACGTCACCAAGACCA +
Preference number: 4 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTRRFQK*STSPRP
Trigger: TGGTCTTGGTGACGTAGACCATTTTTGAAACCGTCT...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR GCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCTCCTCTGCTTGGAGGTaGTGTCGTACGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLSSAWR*CRTCPS
Trigger: GGAAGGACACGTACGACAGCACCTCCAAGCAGAGGA...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR TCA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCAAGGTGGTGGCATCCTaGACTTCCAGCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLKVVAS*TSSSSL
Trigger: TAGGGAACTGCTGGAAGTTCAGGATGCCACCACCTT...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CCA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACCTTTGTCCTTCCCAGTaGGTTTTGATCAATACAATC +
Preference number: 4 (lower is better)
Translates to: GHKARMNGSILSKKETRDLCPSQ*VLINTI
Trigger: GATTGTATTGATCAAAACCCACTGGGAAGGACAAAG...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp GCCGCGGGGCGATGGGTGCTGCTCGGGCTGGCGGGTCCTCGCCGCTaGGCGTGGCCGGAGTGCTGCAGGCAAGCGCGGGGCTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: AAGRWVLLGLAGPRR*AWPECCRQARGSRS
Trigger: GCTCCGAGAGCCCCGCGCTTGCCTGCAGCACTCCGGCCACGCCCAGCGGCGAGGACCCGCCAGCCCGAGCAGCACCCATCGCCCCGCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 90 bp CTGCTCGGGCTGGCGGGTCCTCGCCGCTGGGCGTGGCCGGAGTGCTaGAGGCAAGCGCGGGGCTCTCGGAGCCCGGAGCATCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LLGLAGPRRWAWPEC*RQARGSRSPEHRVG
Trigger: CCCCACCCGATGCTCCGGGCTCCGAGAGCCCCGCGCTTGCCTGCAGCACTCCGGCCACGCCCAGCGGCGAGGACCCGCCAGCCCGAGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 90 bp AGTGCTGCAGGCAAGCGCGGGGCTCTCGGAGCCCGGAGCATCGGGTaGGGACCCCGCGCGCTGGGCCGGCGGAGCGCCGGGAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SAAGKRGALGARSIG*GPRALGRRSAGKLS
Trigger: GGACAGCTTCCCGGCGCTCCGCCGGCCCAGCGCGCGGGGTCCCCACCCGATGCTCCGGGCTCCGAGAGCCCCGCGCTTGCCTGCAGCACT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 90 bp GTGCTGCTCGGGCTGGCGGGTCCTCGCCGCTGGGCGTGGCCGGAGTaGTGCAGGCAAGCGCGGGGCTCTCGGAGCCCGGAGCATCGGGTG +
Preference number: 5 (lower is better)
Translates to: VLLGLAGPRRWAWPE*CRQARGSRSPEHRV
Trigger: CACCCGATGCTCCGGGCTCCGAGAGCCCCGCGCTTGCCTGCAGCACTCCGGCCACGCCCAGCGGCGAGGACCCGCCAGCCCGAGCAGCAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 90 bp AGCTGGTCGTGCTGCAGCAGCGCCGGCACGTCCACCACCAGGCCCTaGCACAGGAGGGCGTCCACGACTGTGCGCCCGCCACTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SWSCCSSAGTSTTRP*HRRASTTVRPPLRR
Trigger: CCGCCTGAGTGGCGGGCGCACAGTCGTGGACGCCCTCCTGTGCCAGGGCCTGGTGGTGGACGTGCCGGCGCTGCTGCAGCACGACCAGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 90 bp CAGCAGGGGCTCCTCGGTCACCAGGCTGGAGGCCCACGGCCCCTTTaGCGGCAGCGCCCATCATGTCCACACCAGCAGCCACGTGGTCAG +
Preference number: 5 (lower is better)
Translates to: QQGLLGHQAGGPRPL*RQRPSCPHQQPRGQ
Trigger: CTGACCACGTGGCTGCTGGTGTGGACATGATGGGCGCTGCCGGCAAAGGGGCCGTGGGCCTCCAGCCTGGTGACCGAGGAGCCCCTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp CTGGGAAGTAGCGGGCCAGCTCATCCGCCCCCAACAGGGCCCCGCTaGCCAGGAGGCTGCCCTCCAGGTAACTCCTGCTGCGGACGTCCT +
Preference number: 5 (lower is better)
Translates to: LGSSGPAHPPPTGPR*PGGCPPGNSCCGRP
Trigger: AGGACGTCCGCAGCAGGAGTTACCTGGAGGGCAGCCTCCTGGCCAGCGGGGCCCTGTTGGGGGCGGATGAGCTGGCCCGCTACTTCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000676019.1
CDS CCA 90 bp CCTGGGCATAGTCGGCCTCGGCTGGGAGCAGGAACTCGTCCAGGCTaGGCGGGAGCTCCTGGAAGGAGGGAGCATGTGGTGGGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: PGHSRPRLGAGTRPG*AGAPGRREHVVGRL
Trigger: GAGCCGGCCCACCACATGCTCCCTCCTTCCAGGAGCTCCCGCCCAGCCTGGACGAGTTCCTGCTCCCAGCCGAGGCCGACTATGCCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675256.1
CDS CCA 90 bp GCCTCGGCTGGGAGCAGGAACTCGTCCAGGCTGGGCGGGAGCTCCTaGAAGGAGGGAGCATGTGGTGGGCCGGCTCCTCCCGAAACCTTC +
Preference number: 5 (lower is better)
Translates to: ASAGSRNSSRLGGSS*KEGACGGPAPPETF
Trigger: GAAGGTTTCGGGAGGAGCCGGCCCACCACATGCTCCCTCCTTCCAGGAGCTCCCGCCCAGCCTGGACGAGTTCCTGCTCCCAGCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675256.1
CDS-3UTR CAA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACAGGACCCCGCGGGACTaGGGGATTTCCTGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHRTPRD*GISCKE
Trigger: CTCCTTGCAGGAAATCCCCAAGTCCCGCGGGGTCCT...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp GCCCTGCATGTTCCAGGTGGCCACGAAGAGTGCCACGTTCCGGTCTaGGAAGTAGCGGGCCAGCTCATCCGCCCCCAACAGGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: ALHVPGGHEECHVPV*EVAGQLIRPQQGPA
Trigger: AGCGGGGCCCTGTTGGGGGCGGATGAGCTGGCCCGCTACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000675256.1
ENST00000676019.1
CDS-3UTR CAA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACGGCTCCTGGAAGCCCTaGAAGATGGACCCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHGSWKP*KMDPFR
Trigger: GCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGCC...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 90 bp CGGGAGCTCCTTCTGGCCCTGCATGTTCCAGGTGGCCACGAAGAGTaGCACGTTCCGGTCTGGGAAGTAGCGGGCCAGCTCATCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RELLLALHVPGGHEE*HVPVWEVAGQLIRP
Trigger: GGGGCGGATGAGCTGGCCCGCTACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGCCAGAAGGAGCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000676019.1
CDS GCA 90 bp CCCTTGAAGATGGACCCTTTCCGCATCTCCCGGATGAGCTGGTCGTaGTGCAGCAGCGCCGGCACGTCCACCACCAGGCCCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: PLKMDPFRISRMSWS*CSSAGTSTTRPWHR
Trigger: CCTGTGCCAGGGCCTGGTGGTGGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGAAAGGGTCCATCTTCAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 90 bp AGCTGCCTCGGACCCCCATCCAGGGCCAGGACACTGCACAGCTTCTaGATGAGGACGCTCAGGCTGGCTGCCACAGCCTGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SCLGPPSRARTLHSF*MRTLRLAATAWASS
Trigger: AGAGCTGGCCCAGGCTGTGGCAGCCAGCCTGAGCGTCCTCATGCAGAAGCTGTGCAGTGTCCTGGCCCTGGATGGGGGTCCGAGGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 90 bp CTGCCACGAGGGCTGGTAACCCGTCAAGAGGCAACCGCACACGCCTaGCGCTCCGTGGGACATCCAGTGTCTGTCGCCGTGGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPRGLVTRQEATAHA*RSVGHPVSVAVGSA
Trigger: AGCAGAGCCCACGGCGACAGACACTGGATGTCCCACGGAGCGGCAGGCGTGTGCGGTTGCCTCTTGACGGGTTACCAGCCCTCGTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp CGTCCAGGCTGGGCGGGAGCTCCTTCTGGCCCTGCATGTTCCAGGTaGCCACGAAGAGTGCCACGTTCCGGTCTGGGAAGTAGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: RPGWAGAPSGPACSR*PRRVPRSGLGSSGP
Trigger: TGGCCCGCTACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGCCAGAAGGAGCTCCCGCCCAGCCTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000676019.1
CDS CCA 90 bp CTGGACCCCGATGACATACAGGTCCTGGGCATAGTCGGCCTCGGCTaGGAGCAGGAACTCGTCCAGGCTGGGCGGGAGCTCCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: LDPDDIQVLGIVGLG*EQELVQAGRELLLA
Trigger: GGCCAGAAGGAGCTCCCGCCCAGCCTGGACGAGTTCCTGCTCCCAGCCGAGGCCGACTATGCCCAGGACCTGTATGTCATCGGGGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000676019.1
CDS-3UTR CAA 90 bp CCCCGAGAGTGGCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACAGGCTGAAGGAGGATTaGGCCGAGCGAAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: PREWLGSVVLLGGSKPCHRLKED*AERREQ
Trigger: CTGTTCCCTTCGCTCGGCCAAATCCTCCTTCAGCCT...GTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGCCACTCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACCTGCTGCGGACGTCCTaGCTGCGGATGGGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDLLRTS*LRMGAR
Trigger: CCTGGCGCCCATCCGCAGCAAGGACGTCCGCAGCAG...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTCAGGCTCGCTCAGGGTaGGCTTCCTTCCTGGGACGC +
Preference number: 5 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRQARSG*ASFLGR
Trigger: GCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTG...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGAGAGGCCCCATGGCAGGCGACTaGCAGCCAAGTGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: GAARRTQMDACFGCGGRGPMAGD*QPSGGE
Trigger: TTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGG...GCCTCTCCCTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp CCTACCTGCTGCGGACGTCCTTGCTGCGGATGGGCGCCAGGAGGCTaGAGGAGGATTTGGCCGAGCGAAGGGAACAGTCGTCGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PTCCGRPCCGWAPGG*RRIWPSEGNSRRRP
Trigger: TGGCCTGCGACGACTGTTCCCTTCGCTCGGCCAAATCCTCCTTCAGCCTCCTGGCGCCCATCCGCAGCAAGGACGTCCGCAGCAGGTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 90 bp GCCTGCAGCCGCCCTACCTGTCAGAACAGCCCTCCTGGACCCCGATaGCATACAGGTCCTGGGCATAGTCGGCCTCGGCTGGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ACSRPTCQNSPPGPR*HTGPGHSRPRLGAG
Trigger: TCCTGCTCCCAGCCGAGGCCGACTATGCCCAGGACCTGTATGTCATCGGGGTCCAGGAGGGCTGTTCTGACAGGTAGGGCGGCTGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674513.1
CDS GCA 90 bp TTGAAGATGGACCCTTTCCGCATCTCCCGGATGAGCTGGTCGTGCTaGAGCAGCGCCGGCACGTCCACCACCAGGCCCTGGCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: LKMDPFRISRMSWSC*SSAGTSTTRPWHRR
Trigger: CCTCCTGTGCCAGGGCCTGGTGGTGGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGAAAGGGTCCATCTTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 90 bp GCCCTCACAGCCATTCCTGTGTCTAGACACGGGCAGGGGCAGAGCTaGCTCGGACCCCCATCCAGGGCCAGGACACTGCACAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ALTAIPVSRHGQGQS*LGPPSRARTLHSFC
Trigger: GCAGAAGCTGTGCAGTGTCCTGGCCCTGGATGGGGGTCCGAGGCAGCTCTGCCCCTGCCCGTGTCTAGACACAGGAATGGCTGTGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp TGGAAGCCCTTGAAGATGGACCCTTTCCGCATCTCCCGGATGAGCTaGTCGTGCTGCAGCAGCGCCGGCACGTCCACCACCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: WKPLKMDPFRISRMS*SCCSSAGTSTTRPW
Trigger: CCAGGGCCTGGTGGTGGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGAAAGGGTCCATCTTCAAGGGCTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp GCTCCGTGGGACATCCAGTGTCTGTCGCCGTGGGCTCTGCTACGGTaGTGCAAGAGCCACCAGGGGATGTGGACACAAGGGGTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: APWDIQCLSPWALLR*CKSHQGMWTQGVQP
Trigger: CGGCTGCACCCCTTGTGTCCACATCCCCTGGTGGCTCTTGCACCACCGTAGCAGAGCCCACGGCGACAGACACTGGATGTCCCACGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp CTGGACCCCGATGACATACAGGTCCTGGGCATAGTCGGCCTCGGCTaGGAGCAGGAACTCGTCCAGGCTGGGCGGGAGCTCCTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LDPDDIQVLGIVGLG*EQELVQAGRELLEG
Trigger: TCCTTCCAGGAGCTCCCGCCCAGCCTGGACGAGTTCCTGCTCCCAGCCGAGGCCGACTATGCCCAGGACCTGTATGTCATCGGGGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675256.1
CDS-3UTR CAA 90 bp GCTGGGGTCCGTGGTGCTGCTGGGCGGGTCCAAACCCTGCCACCCATGCTGTATCGCAGATTCTCCGCCTaGGACGGCATGGACGGTCTC +
Preference number: 5 (lower is better)
Translates to: AGVRGAAGRVQTLPPMLYRRFSA*DGMDGL
Trigger: GAGACCGTCCATGCCGTCCAAGGCGGAGAATCTGCG...ATACAGCATGGGTGGCAGGGTTTGGACCCGCCCAGCAGCACCACGGACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACGCTGGCACACGGTGGTCGGACGTCTaGATCCCGGGGCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ATEDRLAQGWLPSWDAGTRWSDV*IPGQEE
Trigger: CTCTTCCTGCCCCGGGATCAAGACGTCCGACCACCG...TGTGCCAGCGTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp AACTCCTGCTGCGGACGTCCTTGCTGCGGATGGGCGCCAGGAGGCTaGAGGAGGATTTGGCCGAGCGAAGGGAACAGTCGTCGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: NSCCGRPCCGWAPGG*RRIWPSEGNSRRRP
Trigger: TGGCCTGCGACGACTGTTCCCTTCGCTCGGCCAAATCCTCCTTCAGCCTCCTGGCGCCCATCCGCAGCAAGGACGTCCGCAGCAGGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp GAGTCTCCCACTCCCGCCTGTCAGAACAGCCCTCCTGGACCCCGATaGCATACAGGTCCTGGGCATAGTCGGCCTCGGCTGGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ESPTPACQNSPPGPR*HTGPGHSRPRLGAG
Trigger: TCCTGCTCCCAGCCGAGGCCGACTATGCCCAGGACCTGTATGTCATCGGGGTCCAGGAGGGCTGTTCTGACAGGCGGGAGTGGGAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371712.4
CDS GCA 90 bp GCTGTGGGCCCGCACCAGGAGCGGCTGCGCGCGGAGCTTGTAGTCTaGAAGATCCGAGTCGACCTTGTTTGCTGTCCTCAGGGAGTCGGA +
Preference number: 5 (lower is better)
Translates to: AVGPHQERLRAELVV*KIRVDLVCCPQGVG
Trigger: TCCGACTCCCTGAGGACAGCAAACAAGGTCGACTCGGATCTTGCAGACTACAAGCTCCGCGCGCAGCCGCTCCTGGTGCGGGCCCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 90 bp CCGTGGGACATCCAGTGTCTGTCGCCGTGGGCTCTGCTACGGTGGTaGAAGAGCCACCAGGGGATGTGGACACAAGGGGTGCAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: PWDIQCLSPWALLRW*KSHQGMWTQGVQPC
Trigger: ACACGGCTGCACCCCTTGTGTCCACATCCCCTGGTGGCTCTTGCACCACCGTAGCAGAGCCCACGGCGACAGACACTGGATGTCCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 90 bp TCCCGAAACCTTCTGGCCCTGCATGTTCCAGGTGGCCACGAAGAGTaGCACGTTCCGGTCTGGGAAGTAGCGGGCCAGCTCATCCGCCCC +
Preference number: 5 (lower is better)
Translates to: SRNLLALHVPGGHEE*HVPVWEVAGQLIRP
Trigger: GGGGCGGATGAGCTGGCCCGCTACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGCCAGAAGGTTTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675256.1
CDS CCA 90 bp ATGTCCGGCTCCTGGAAGCCCTTGAAGATGGACCCTGCCACAGGATaGGCACTCGGACTGGCTCAGACCAGCTTGTGCCAGCCGCCGCAC +
Preference number: 5 (lower is better)
Translates to: MSGSWKPLKMDPATG*ALGLAQTSLCQPPH
Trigger: GTGCGGCGGCTGGCACAAGCTGGTCTGAGCCAGTCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS-3UTR CAA 90 bp GAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCTGCTGCGGACGTCCTaGCTGCGGATGGGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: ERNPGHGGDPWPRCSRWWLLRTS*LRMGAR
Trigger: CCTGGCGCCCATCCGCAGCAAGGACGTCCGCAGCAG...CCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 90 bp CCGGCAGCGCCCATCATGTCCACACCAGCAGCCACGTGGTCAGTCTaGCCAGCTCTGTCCAGAGCATGGTTAGTAACAGCAGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: PAAPIMSTPAATWSV*PALSRAWLVTAGQG
Trigger: CCCCTGGCCTGCTGTTACTAACCATGCTCTGGACAGAGCTGGGCAGACTGACCACGTGGCTGCTGGTGTGGACATGATGGGCGCTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp TGGTGTCGGGCACATTTCTGGGCAGGACCAGGGCTTGTACAGTCCTaGTGTAGTCCAGCAGCCGCTCCGCCACCTTCCCGTCACCTGAGG +
Preference number: 5 (lower is better)
Translates to: WCRAHFWAGPGLVQS*CSPAAAPPPSRHLR
Trigger: CCTCAGGTGACGGGAAGGTGGCGGAGCGGCTGCTGGACTACACCAGGACTGTACAAGCCCTGGTCCTGCCCAGAAATGTGCCCGACACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp CGTCCGCTGCGCTGGAGCGATAGGGGTTGGTGTCGGGCACATTTCTaGGCAGGACCAGGGCTTGTACAGTCCTGGTGTAGTCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: RPLRWSDRGWCRAHF*AGPGLVQSWCSPAA
Trigger: GGCTGCTGGACTACACCAGGACTGTACAAGCCCTGGTCCTGCCCAGAAATGTGCCCGACACCAACCCCTATCGCTCCAGCGCAGCGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTGCCGGGAAGCTGTCCTaGGAGCGTCCTCCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: EAASYSAGEALILGCRPPAGKLS*ERPPFR
Trigger: CCGGAAGGGAGGACGCTCCAAGGACAGCTTCCCGGC...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTCTCCTCCTCCAGCCCTaGTCGTCCAGGGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLLLLQP*SSRDRA
Trigger: AGCCCTGTCCCTGGACGACAAGGGCTGGAGGAGGAG...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGAGGACCCCGCGGGACTaGGGGATTTCCTGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: VFEGLPGGHRWTPASGVERTPRD*GISCKE
Trigger: CTCCTTGCAGGAAATCCCCAAGTCCCGCGGGGTCCT...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGAGGGCGTCCTCTGCTaGGAGGTGCTGTCGTACGTG +
Preference number: 5 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEEGVLC*EVLSYV
Trigger: CACGTACGACAGCACCTCCAAGCAGAGGACGCCCTC...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGGACAGATGTCACCCTaGTGGCGGCTTCTGTACAAG +
Preference number: 5 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHGQMSP*WRLLYK
Trigger: CTTGTACAGAAGCCGCCACAAGGGTGACATCTGTCC...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp ACAGGAGCTGCTCAGGAACGGATTCTGACGTCTGCCCCCGAGAGTGGCTGGGGTGCTGCCAACGGAATGTaGTCTCGCCCCGGCCTCACT +
Preference number: 5 (lower is better)
Translates to: TGAAQERILTSAPESGWGAANGM*SRPGLT
Trigger: AGTGAGGCCGGGGCGAGACAACATTCCGTTGGCAGC...ACCCCAGCCACTCTCGGGGGCAGACGTCAGAATCCGTTCCTGAGCAGCTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 90 bp CTGCGCGCGGAGCTTGTAGTCTGCAAGATCCGAGTCGACCTTGTTTaGTGTCCTCAGGGAGTCGGAGGCGATGTCCAGGCTCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LRAELVVCKIRVDLV*CPQGVGGDVQAQGR
Trigger: CCTGCCCTGAGCCTGGACATCGCCTCCGACTCCCTGAGGACAGCAAACAAGGTCGACTCGGATCTTGCAGACTACAAGCTCCGCGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 90 bp ACACCAGCAGCCACGTGGTCAGTCTGCCCAGCTCTGTCCAGAGCATaGTTAGTAACAGCAGGCCAGGGGCGGCCCTCACAGCCATTCCTG +
Preference number: 5 (lower is better)
Translates to: TPAATWSVCPALSRA*LVTAGQGRPSQPFL
Trigger: CAGGAATGGCTGTGAGGGCCGCCCCTGGCCTGCTGTTACTAACCATGCTCTGGACAGAGCTGGGCAGACTGACCACGTGGCTGCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTCGCAGATTCTCCGCCTaGGACGGCATGGACGGTCTC +
Preference number: 5 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLRRFSA*DGMDGL
Trigger: GAGACCGTCCATGCCGTCCAAGGCGGAGAATCTGCG...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 90 bp CCAACACAGAAACCACCTCACACCTCTCCCTTCTCACACCTGTCCTaGCTCCCGCCGCGGCTGACAGACAAGACTTGGGCACCATGGCAG +
Preference number: 5 (lower is better)
Translates to: PTQKPPHTSPFSHLS*LPPRLTDKTWAPWQ
Trigger: CTGCCATGGTGCCCAAGTCTTGTCTGTCAGCCGCGGCGGGAGGCAGGACAGGTGTGAGAAGGGAGAGGTGTGAGGTGGTTTCTGTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 90 bp GAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTTGAAGATGGACCCTaGCACAGGATGGGCACTCGGACTGGCTCAGACCAGCTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: EEVDVRLLEALEDGP*HRMGTRTGSDQLVP
Trigger: TGGCACAAGCTGGTCTGAGCCAGTCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS CCA 90 bp GCCCCTTTGCCGGCAGCGCCCATCATGTCCACACCAGCAGCCACGTaGTCAGTCTGCCCAGCTCTGTCCAGAGCATGGTTAGTAACAGCA +
Preference number: 5 (lower is better)
Translates to: APLPAAPIMSTPAAT*SVCPALSRAWLVTA
Trigger: TGCTGTTACTAACCATGCTCTGGACAGAGCTGGGCAGACTGACCACGTGGCTGCTGGTGTGGACATGATGGGCGCTGCCGGCAAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp CCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGCATCCTGAACCGAGTCGACCTTGTTaGCTGTCCTCAGGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: PGHGGDPWPRCSRWWHPEPSRPC*LSSGSR
Trigger: CCGACTCCCTGAGGACAGCAAACAAGGTCGACTCGG...TTCAGGATGCCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp CTTTCACCCGGAAGAGGCCATACACAGGGCGGTGGTCGGACGTCTTaGTCCCGGGGCAGGAAGAGTAGCTCACAGGACAGATGTCACCCT +
Preference number: 5 (lower is better)
Translates to: LSPGRGHTQGGGRTS*SRGRKSSSQDRCHP
Trigger: AGGGTGACATCTGTCCTGTGAGCTACTCTTCCTGCCCCGGGATCAAGACGTCCGACCACCGCCCTGTGTATGGCCTCTTCCGGGTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp GTTCCCTTCCGCAAGGGGACACGAGAGCATAGTGCCGGATTCCTGTaGCCTCCCGCGAGAACTTCTTCAACCCTGGCTGCGGCTCACCAA +
Preference number: 5 (lower is better)
Translates to: VPFRKGTREHSAGFL*PPARTSSTLAAAHQ
Trigger: TTGGTGAGCCGCAGCCAGGGTTGAAGAAGTTCTCGCGGGAGGTCACAGGAATCCGGCACTATGCTCTCGTGTCCCCTTGCGGAAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp AACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACATGGTGGGGATCCCTGGCGCCGGGAAGCTGTCCTaGGAGCGTCCTCCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: NGSILSKKETRDMVGIPGAGKLS*ERPPFR
Trigger: CCGGAAGGGAGGACGCTCCAAGGACAGCTTCCCGGC...GCCAGGGATCCCCACCATGTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GTGTTTGAGGGGCTGCCAGGAGGACACAGATGGACGCCTGCTTCGGGTGTGGAGGGACAGATGTCACCCTaGTGGCGGCTTCTGTACAAG +
Preference number: 5 (lower is better)
Translates to: VFEGLPGGHRWTPASGVEGQMSP*WRLLYK
Trigger: CTTGTACAGAAGCCGCCACAAGGGTGACATCTGTCC...CTCCACACCCGAAGCAGGCGTCCATCTGTGTCCTCCTGGCAGCCCCTCAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp CCTCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACCCTTCCCAGTGGGTTTaGATCAATACAATCACCCCA +
Preference number: 5 (lower is better)
Translates to: PPRPMAGDLQPSGGEPCHPSQWV*INTITP
Trigger: TGGGGTGATTGTATTGATCAAAACCCACTGGGAAGG...GTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp GATCTGAGACACGATGCGTGTGGTCACCGTGGAGCACTCCACCTCTaGGCAGAACCAGATGAGGTCCCTGTCAGAACAGCCCTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: DLRHDACGHRGALHL*AEPDEVPVRTALLD
Trigger: GTCCAGGAGGGCTGTTCTGACAGGGACCTCATCTGGTTCTGCTCAGAGGTGGAGTGCTCCACGGTGACCACACGCATCGTGTCTCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676019.1
CDS CCA 90 bp CTCAGGACAGGCCCCCAGACTGAGACCCCAAGACAAGACCAGGCTTaGGAGAGGTCATGGGTTCAGCTGCAGTTCCTTCCAGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: LRTGPQTETPRQDQA*ERSWVQLQFLPATA
Trigger: AGCTGTTGCTGGAAGGAACTGCAGCTGAACCCATGACCTCTCCCAAGCCTGGTCTTGTCTTGGGGTCTCAGTCTGGGGGCCTGTCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTAGGCTGAAGGAGGATTaGGCCGAGCGAAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: EAASYSAGEALILGCRPPRLKED*AERREQ
Trigger: CTGTTCCCTTCGCTCGGCCAAATCCTCCTTCAGCCT...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp TCCTCGCCCCATGGCAGGCGACTTGCAGCCAAGTGGAGGGGAACCGTGCCACGTTTCCCGATGTCAAACTaGTATGATGGGAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SSPHGRRLAAKWRGTVPRFPMSN*YDGRKW
Trigger: CCACTTCCTCCCATCATACAAGTTTGACATCGGGAA...ACGTGGCACGGTTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGGGCGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp CTCTGCCAAGTCATAGTGGGAGCATCTCAGGACAGGCCCCCAGACTaGGACCCCAAGACAAGACCAGGCTTGGGAGAGGTCATGGGTTCA +
Preference number: 5 (lower is better)
Translates to: LCQVIVGASQDRPPD*DPKTRPGLGEVMGS
Trigger: TGAACCCATGACCTCTCCCAAGCCTGGTCTTGTCTTGGGGTCTCAGTCTGGGGGCCTGTCCTGAGATGCTCCCACTATGACTTGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 90 bp ACTTGTATGATGGGAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTTaGAGATGGACCCTGCCACAGGATGGGCACTCGGACTGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: TCMMGGSGCPAPGSP*RWTLPQDGHSDWLR
Trigger: TCTGAGCCAGTCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS GCA 90 bp TGGCAAAAGCCAGCAGCCATTCTCAAACAGGGCGGACCCAGCCCGTaGACACGCGGCCCGCAAACTCAGAATGGGTTTTACTGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: WQKPAAILKQGGPSP*TRGPQTQNGFYCVE
Trigger: TTCCACACAGTAAAACCCATTCTGAGTTTGCGGGCCGCGTGTGCACGGGCTGGGTCCGCCCTGTTTGAGAATGGCTGCTGGCTTTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp GAAGCAGCTTCTTACTCAGCTGGGGAGGCCCTTATACTGGGGTGCAGGCCTCCTAGATCCGAGTCGACCTaGTTTGCTGTCCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EAASYSAGEALILGCRPPRSEST*FAVLRE
Trigger: CTCCCTGAGGACAGCAAACAAGGTCGACTCGGATCT...AGGAGGCCTGCACCCCAGTATAAGGGCCTCCCCAGCTGAGTAAGAAGCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp AACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCCGCGGCTGGAGTGGCTCCTGGAAGCCCTaGAAGATGGACCCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: NFQQFPSPVPLMSFRGWSGSWKP*KMDPFR
Trigger: GCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGCC...ACTCCAGCCGCGGAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GGTGGCATCCTGAACTTCCAGCAGTTCCCTAGCCCGGTTCCACTAATGTCATTCGAGGGCGTCCTCTGCTaGGAGGTGCTGTCGTACGTG +
Preference number: 5 (lower is better)
Translates to: GGILNFQQFPSPVPLMSFEGVLC*EVLSYV
Trigger: CACGTACGACAGCACCTCCAAGCAGAGGACGCCCTC...GAATGACATTAGTGGAACCGGGCTAGGGAACTGCTGGAAGTTCAGGATGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp TGTGGACCTGCCACAGAGGACAGGCTCGCTCAGGGTTGGCTTCCTTCCTGGGACAAGGCGGCAAACTCTTaGTCCTTCCCAGTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: CGPATEDRLAQGWLPSWDKAANS*SFPVGF
Trigger: AAAACCCACTGGGAAGGACAAAGAGTTTGCCGCCTT...GTCCCAGGAAGGAAGCCAACCCTGAGCGAGCCTGTCCTCTGTGGCAGGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp GCCTCTGGAGAGAGGCTGCGTGGCCACACCTTGATTTTAGACTTCTaGCCTCTAGAACTGGGAGAGAGTCCAGCTCTGCTGTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: ASGERLRGHTLILDF*PLELGESPALLLQA
Trigger: GGCTTGCAACAGCAGAGCTGGACTCTCTCCCAGTTCTAGAGGCCAGAAGTCTAAAATCAAGGTGTGGCCACGCAGCCTCTCTCCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp CTAAAACTGTCGACAATCCCGGTCGGGACAGCTGTGTTCACACAGTaGTCATTCGGGACAGAGAGCGTTCCTGTGGGCACCCCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LKLSTIPVGTAVFTQ*SFGTESVPVGTPVK
Trigger: CTTGACAGGGGTGCCCACAGGAACGCTCTCTGTCCCGAATGACCACTGTGTGAACACAGCTGTCCCGACCGGGATTGTCGACAGTTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp CCGATGTCAAACTTGTATGATGGGAGGAAGTGGATGTCCGGCTCCTaGAAGCCCTTGAAGATGGACCCTGCCACAGGATGGGCACTCGGA +
Preference number: 5 (lower is better)
Translates to: PMSNLYDGRKWMSGS*KPLKMDPATGWALG
Trigger: TCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS-3UTR CAA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCCGGTGGTCGGACGTCTaGATCCCGGGGCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTRWSDV*IPGQEE
Trigger: CTCTTCCTGCCCCGGGATCAAGACGTCCGACCACCG...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GCACGGTCGCCACAGTCCCTCGGATCCCCGAAAGGCGGCAAACTCTTTGTCCTTAAGGCGGCAAACTCTTaGTCCTTCCCAGTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: ARSPQSLGSPKGGKLFVLKAANS*SFPVGF
Trigger: AAAACCCACTGGGAAGGACAAAGAGTTTGCCGCCTT...AAGGACAAAGAGTTTGCCGCCTTTCGGGGATCCGAGGGACTGTGGCGACCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp GCCATCCTGTCTACCTTAACACAACGTCACGCCCACGAATGGTTCTaGAACGCACAGGAAAAGTTCTGGGAAGGGCGCTGCTGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: AILSTLTQRHAHEWF*NAQEKFWEGRCCGV
Trigger: CACCCCACAGCAGCGCCCTTCCCAGAACTTTTCCTGTGCGTTTCAGAACCATTCGTGGGCGTGACGTTGTGTTAAGGTAGACAGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 90 bp TGCCGGATTCCTGTGACCTCCCGCGAGAACTTCTTCAACCCTGGCTaGGGCTCACCAAGCTTCACTGGACACGTTAAATCATGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: CRIPVTSRENFFNPG*GSPSFTGHVKSCQQ
Trigger: CTGCTGACATGATTTAACGTGTCCAGTGAAGCTTGGTGAGCCGCAGCCAGGGTTGAAGAAGTTCTCGCGGGAGGTCACAGGAATCCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 90 bp CCGATGTCAAACTTGTATGATGGGAGGAAGTGGATGTCCGGCTCCTaGAAGCCCTTGAAGATGGACCCTTTCCGCATCTCCCGGATGAGC +
Preference number: 5 (lower is better)
Translates to: PMSNLYDGRKWMSGS*KPLKMDPFRISRMS
Trigger: GCTCATCCGGGAGATGCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp GGCTTCTGTACAAGACGCGGTCCGTGTATGAGGGCGTCCTCTGCTTaGAGGTGCTGTCGTACGTGTCCTTCCCGATGTCAAACTTGTATG +
Preference number: 5 (lower is better)
Translates to: GFCTRRGPCMRASSA*RCCRTCPSRCQTCM
Trigger: CATACAAGTTTGACATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAGGACGCCCTCATACACGGACCGCGTCTTGTACAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS GCA 90 bp TGTACAAGACGCGGTCCGTGTATGAGGGCGTCCTCTGCTTGGAGGTaGTGTCGTACGTGTCCTTCCCGATGTCAAACTTGTATGATGGGA +
Preference number: 5 (lower is better)
Translates to: CTRRGPCMRASSAWR*CRTCPSRCQTCMMG
Trigger: TCCCATCATACAAGTTTGACATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAGGACGCCCTCATACACGGACCGCGTCTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CCA 90 bp TCGTACGTGTCCTTCCCGATGTCAAACTTGTATGATGGGAGGAAGTaGATGTCCGGCTCCTGGAAGCCCTTGAAGATGGACCCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: SYVSFPMSNLYDGRK*MSGSWKPLKMDPFR
Trigger: GCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGGGAAGGACACGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp TCGTACGTGTCCTTCCCGATGTCAAACTTGTATGATGGGAGGAAGTaGATGTCCGGCTCCTGGAAGCCCTTGAAGATGGACCCTGCCACA +
Preference number: 5 (lower is better)
Translates to: SYVSFPMSNLYDGRK*MSGSWKPLKMDPAT
Trigger: TGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGGGAAGGACACGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS TCA 90 bp CTTGGAGGTGCTGTCGTACGTGTCCTTCCCGATGTCAAACTTGTATaGTGGGAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LGGAVVRVLPDVKLV*WEEVDVRLLEALED
Trigger: ATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGGGAAGGACACGTACGACAGCACCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CCA 90 bp TTCCAGCAACAGCTGGAGCCCACCAAAATGTTCCTCATGAGCAAGTaGCTAAACGAAAGTAGCCTCAACACATCTGGGGCCTCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: FQQQLEPTKMFLMSK*LNESSLNTSGASCR
Trigger: GCGGCAAGAGGCCCCAGATGTGTTGAGGCTACTTTCGTTTAGCCACTTGCTCATGAGGAACATTTTGGTGGGCTCCAGCTGTTGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp GAAAGAAACCCGGGACATGGTGGGGATCCCTGGCCTAGGTGTTCAAGGTGGTGGAGTTCTCTATCAAATTaGCCAGCTGCCAACGGAATG +
Preference number: 5 (lower is better)
Translates to: ERNPGHGGDPWPRCSRWWSSLSN*PAANGM
Trigger: CATTCCGTTGGCAGCTGGCAAATTTGATAGAGAACT...CCACCACCTTGAACACCTAGGCCAGGGATCCCCACCATGTCCCGGGTTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp GGACACAAAGCAAGAATGAACGGTTCTATACTCTCGAAGAAAGAAACCCGGGACCCCATGGCAGGCGACTaGCAGCCAAGTGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: GHKARMNGSILSKKETRDPMAGD*QPSGGE
Trigger: TTCCCCTCCACTTGGCTGCAAGTCGCCTGCCATGGG...GTCCCGGGTTTCTTTCTTCGAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 90 bp AACAGACCGGAGGTCTGGAAATGGGAAGCTGTTAGGCAGCAGAACTaGGTTAAAGGATCCACGTCAACCCTCGTTTCCTGGTTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: NRPEVWKWEAVRQQN*VKGSTSTLVSWLFE
Trigger: TTCAAACAACCAGGAAACGAGGGTTGACGTGGATCCTTTAACCCAGTTCTGCTGCCTAACAGCTTCCCATTTCCAGACCTCCGGTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp AATGTCATTCCGCGGCTGGAGTTAAAGAAGCAAACGGTCTACGTCACCAAGACCTTCCCGATGTCAAACTaGTATGATGGGAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: NVIPRLELKKQTVYVTKTFPMSN*YDGRKW
Trigger: CCACTTCCTCCCATCATACAAGTTTGACATCGGGAA...GGTCTTGGTGACGTAGACCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS-3UTR CAA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCAGATCCGAGTCGACCTaGTTTGCTGTCCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLRSEST*FAVLRE
Trigger: CTCCCTGAGGACAGCAAACAAGGTCGACTCGGATCT...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp CTCGTTTCCTGGTTGTTTGAAAACAATGACTTGAGGGTCCAAATTTaGGACACGACTGTCCTTTTCTCTAACAGGTGTATCTACGTCAAC +
Preference number: 5 (lower is better)
Translates to: LVSWLFENNDLRVQI*DTTVLFSNRCIYVN
Trigger: GTTGACGTAGATACACCTGTTAGAGAAAAGGACAGTCGTGTCTCAAATTTGGACCCTCAAGTCATTGTTTTCAAACAACCAGGAAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS-3UTR CAA 90 bp TTTTTCAAGAGATGGAATGGGACACAAAGCAAGAATGAACGGTTCTATACTCTCCCTTCCCAGTGGGTTTaGATCAATACAATCACCCCA +
Preference number: 5 (lower is better)
Translates to: FFKRWNGTQSKNERFYTLPSQWV*INTITP
Trigger: TGGGGTGATTGTATTGATCAAAACCCACTGGGAAGG...GAGAGTATAGAACCGTTCATTCTTGCTTTGTGTCCCATTCCATCTCTTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 90 bp TCTCTAACAGGTGTATCTACGTCAACCGGATCTAATTTTAAAATGTaGTGCTTTAGATGCACTAAGAAATCTCACTCTTTACGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SLTGVSTSTGSNFKM*CFRCTKKSHSLREA
Trigger: GGCTTCTCGTAAAGAGTGAGATTTCTTAGTGCATCTAAAGCATCACATTTTAAAATTAGATCCGGTTGACGTAGATACACCTGTTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 72 bp GGGCTGGCGGGTCCTCGCCGCTGGGCGTGGCCGGAGTaGTGCAGGCAAGCGCGGGGCTCTCGGAGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: GLAGPRRWAWPE*CRQARGSRSPE
Trigger: CTCCGGGCTCCGAGAGCCCCGCGCTTGCCTGCAGCACTCCGGCCACGCCCAGCGGCGAGGACCCGCCAGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 72 bp CGGGGTCGCCGGCGCAGCGAGGAGCAGAAACGCCGCTaGGGCTCCCGCTTGGGCCGGGGATGGTCGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RGRRRSEEQKRR*GSRLGRGWSRR
Trigger: CCTCCGCGACCATCCCCGGCCCAAGCGGGAGCCGCAGCGGCGTTTCTGCTCCTCGCTGCGCCGGCGACCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 72 bp TCGGAGCCCGGAGCATCGGGTGGGGACCCCGCGCGCTaGGCCGGCGGAGCGCCGGGAAGCTGTCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: SEPGASGGDPAR*AGGAPGSCPWS
Trigger: GCTCCAAGGACAGCTTCCCGGCGCTCCGCCGGCCCAGCGCGCGGGGTCCCCACCCGATGCTCCGGGCTCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 72 bp CTGGCGGGTCCTCGCCGCTGGGCGTGGCCGGAGTGCTaGAGGCAAGCGCGGGGCTCTCGGAGCCCGGAGCAT +
Preference number: 6 (lower is better)
Translates to: LAGPRRWAWPEC*RQARGSRSPEH
Trigger: ATGCTCCGGGCTCCGAGAGCCCCGCGCTTGCCTGCAGCACTCCGGCCACGCCCAGCGGCGAGGACCCGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 72 bp CGGCGCGGGCGCTGCACCCGCCAGGCCCTCCCTACCTaGTGCGGACGTCCTTGCTGCGGATGGGCGCCAGGA +
Preference number: 6 (lower is better)
Translates to: RRGRCTRQALPT*CGRPCCGWAPG
Trigger: TCCTGGCGCCCATCCGCAGCAAGGACGTCCGCAGCAGGTAGGGAGGGCCTGGCGGGTGCAGCGCCCGCGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp GCGGGGCCGGCTCGGAGGGCCGCAGATTCTCCGCCTTaGACGGCATGGACGGTCTCTCCCGGGGCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: AGPARRAADSPP*TAWTVSPGAGL
Trigger: GAGGCCTGCCCCGGGAGAGACCGTCCATGCCGTCCAAGGCGGAGAATCTGCGGCCCTCCGAGCCGGCCCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 72 bp GGAAGCTGTCCTTGGAGCGTCCTCCCTTCCGGCGGCTaGGGGGCCGGCTCGGAGGGCCGCAGATTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: GSCPWSVLPSGG*GAGSEGRRFSA
Trigger: GGCGGAGAATCTGCGGCCCTCCGAGCCGGCCCCGCAGCCGCCGGAAGGGAGGACGCTCCAAGGACAGCTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 72 bp GCTCGGAGGGCCGCAGATTCTCCGCCTTGGACGGCATaGACGGTCTCTCCCGGGGCAGGCCTCGGCGCGAGG +
Preference number: 6 (lower is better)
Translates to: ARRAADSPPWTA*TVSPGAGLGAR
Trigger: CCTCGCGCCGAGGCCTGCCCCGGGAGAGACCGTCCATGCCGTCCAAGGCGGAGAATCTGCGGCCCTCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 72 bp TGCTGCAGCAGCGCCGGCACGTCCACCACCAGGCCCTaGCACAGGAGGGCGTCCACGACTGTGCGCCCGCCA +
Preference number: 6 (lower is better)
Translates to: CCSSAGTSTTRP*HRRASTTVRPP
Trigger: TGGCGGGCGCACAGTCGTGGACGCCCTCCTGTGCCAGGGCCTGGTGGTGGACGTGCCGGCGCTGCTGCAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CAA 72 bp TGCGGGGCCGGCTCGGAGGGCCGCAGATTCTCCGCCTaGGACGGCATGGACGGTCTCTCCCGGGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: CGAGSEGRRFSA*DGMDGLSRGRP
Trigger: AGGCCTGCCCCGGGAGAGACCGTCCATGCCGTCCAAGGCGGAGAATCTGCGGCCCTCCGAGCCGGCCCCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 72 bp AGCGGGCCAGCTCATCCGCCCCCAACAGGGCCCCGCTaGCCAGGAGGCTGCCCTCCAGGTAACTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SGPAHPPPTGPR*PGGCPPGNSCC
Trigger: GCAGCAGGAGTTACCTGGAGGGCAGCCTCCTGGCCAGCGGGGCCCTGTTGGGGGCGGATGAGCTGGCCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000676019.1
CDS GCA 72 bp CATCCGCCCCCAACAGGGCCCCGCTGGCCAGGAGGCTaGCCTCCAGGTAACTCCTGCTGCGGACGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: HPPPTGPRWPGG*PPGNSCCGRPC
Trigger: GCAAGGACGTCCGCAGCAGGAGTTACCTGGAGGGCAGCCTCCTGGCCAGCGGGGCCCTGTTGGGGGCGGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000676019.1
CDS CCA 72 bp GGGAGCAGGAACTCGTCCAGGCTGGGCGGGAGCTCCTaGAAGGAGGGAGCATGTGGTGGGCCGGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: GSRNSSRLGGSS*KEGACGGPAPP
Trigger: GGGAGGAGCCGGCCCACCACATGCTCCCTCCTTCCAGGAGCTCCCGCCCAGCCTGGACGAGTTCCTGCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675256.1
CDS CAA 72 bp GCTCCTCGGTCACCAGGCTGGAGGCCCACGGCCCCTTaGCCGGCAGCGCCCATCATGTCCACACCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: APRSPGWRPTAP*PAAPIMSTPAA
Trigger: GGCTGCTGGTGTGGACATGATGGGCGCTGCCGGCAAAGGGGCCGTGGGCCTCCAGCCTGGTGACCGAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CAA 90 bp CCAGCAGGGGCTCCTCGGTCACCAGGCTGGAGGCCCACGGCCCCTTaGCCGGCAGCGCCCATCATGTCCACACCAGCAGCCACGTGGTCA +
Preference number: 6 (lower is better)
Translates to: PAGAPRSPGWRPTAP*PAAPIMSTPAATWS
Trigger: TGACCACGTGGCTGCTGGTGTGGACATGATGGGCGCTGCCGGCAAAGGGGCCGTGGGCCTCCAGCCTGGTGACCGAGGAGCCCCTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 72 bp GACCCTTTCCGCATCTCCCGGATGAGCTGGTCGTGCTaGAGCAGCGCCGGCACGTCCACCACCAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: DPFRISRMSWSC*SSAGTSTTRPW
Trigger: CCAGGGCCTGGTGGTGGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGAAAGGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 72 bp CTCCTCGGTCACCAGGCTGGAGGCCCACGGCCCCTTTaGCGGCAGCGCCCATCATGTCCACACCAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: LLGHQAGGPRPL*RQRPSCPHQQP
Trigger: TGGCTGCTGGTGTGGACATGATGGGCGCTGCCGGCAAAGGGGCCGTGGGCCTCCAGCCTGGTGACCGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 72 bp ATGGACCCTTTCCGCATCTCCCGGATGAGCTGGTCGTaGTGCAGCAGCGCCGGCACGTCCACCACCAGGCCC +
Preference number: 6 (lower is better)
Translates to: MDPFRISRMSWS*CSSAGTSTTRP
Trigger: GGGCCTGGTGGTGGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGAAAGGGTCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 72 bp CGCACCTGCTCCATCCATGACAGGAGGAGAGTATGGTaGGGGCGCCAGGCACGGGCCCTCACTCCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: RTCSIHDRRRVW*GRQARALTPGL
Trigger: CAGGCCTGGAGTGAGGGCCCGTGCCTGGCGCCCCCACCATACTCTCCTCCTGTCATGGATGGAGCAGGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 72 bp GGACCCCCATCCAGGGCCAGGACACTGCACAGCTTCTaGATGAGGACGCTCAGGCTGGCTGCCACAGCCTGG +
Preference number: 6 (lower is better)
Translates to: GPPSRARTLHSF*MRTLRLAATAW
Trigger: CCAGGCTGTGGCAGCCAGCCTGAGCGTCCTCATGCAGAAGCTGTGCAGTGTCCTGGCCCTGGATGGGGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 72 bp GGGCTGGTAACCCGTCAAGAGGCAACCGCACACGCCTaGCGCTCCGTGGGACATCCAGTGTCTGTCGCCGTG +
Preference number: 6 (lower is better)
Translates to: GLVTRQEATAHA*RSVGHPVSVAV
Trigger: CACGGCGACAGACACTGGATGTCCCACGGAGCGGCAGGCGTGTGCGGTTGCCTCTTGACGGGTTACCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp GGCTCCCTCTCTCACTGCTCAGGACCCCGCGGGACTTaGGGATTTCCTGCAAGGAGGTGCTCAGGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: GSLSHCSGPRGT*GFPARRCSGRA
Trigger: CGCCCTGCCTGAGCACCTCCTTGCAGGAAATCCCCAAGTCCCGCGGGGTCCTGAGCAGTGAGAGAGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 72 bp GATCGCACCTGCTCCATCCATGACAGGAGGAGAGTATaGTGGGGGCGCCAGGCACGGGCCCTCACTCCAGGC +
Preference number: 6 (lower is better)
Translates to: DRTCSIHDRRRV*WGRQARALTPG
Trigger: GCCTGGAGTGAGGGCCCGTGCCTGGCGCCCCCACCATACTCTCCTCCTGTCATGGATGGAGCAGGTGCGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp CCCGTCAAGAGGCAACCGCACACGCCTGCCGCTCCGTaGGACATCCAGTGTCTGTCGCCGTGGGCTCTGCTA +
Preference number: 6 (lower is better)
Translates to: PVKRQPHTPAAP*DIQCLSPWALL
Trigger: TAGCAGAGCCCACGGCGACAGACACTGGATGTCCCACGGAGCGGCAGGCGTGTGCGGTTGCCTCTTGACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CAA 72 bp GGGCTCCCTCTCTCACTGCTCAGGACCCCGCGGGACTaGGGGATTTCCTGCAAGGAGGTGCTCAGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: GLPLSLLRTPRD*GISCKEVLRQG
Trigger: GCCCTGCCTGAGCACCTCCTTGCAGGAAATCCCCAAGTCCCGCGGGGTCCTGAGCAGTGAGAGAGGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CCA 72 bp GTTCCAGGTGGCCACGAAGAGTGCCACGTTCCGGTCTaGGAAGTAGCGGGCCAGCTCATCCGCCCCCAACAG +
Preference number: 6 (lower is better)
Translates to: VPGGHEECHVPV*EVAGQLIRPQQ
Trigger: CTGTTGGGGGCGGATGAGCTGGCCCGCTACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000675256.1
ENST00000676019.1
CDS CCA 72 bp GATGACATACAGGTCCTGGGCATAGTCGGCCTCGGCTaGGAGCAGGAACTCGTCCAGGCTGGGCGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: DDIQVLGIVGLG*EQELVQAGREL
Trigger: GAGCTCCCGCCCAGCCTGGACGAGTTCCTGCTCCCAGCCGAGGCCGACTATGCCCAGGACCTGTATGTCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000675256.1
ENST00000676019.1
CDS CCA 72 bp ACCCGTTCTCAGCTCGCCGACTATACAGAAACGCCGTaGGCTAGGCTTGCCAGCCGTCCTCCCCGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: TRSQLADYTETP*ARLASRPPRSL
Trigger: GAGGGAGCGGGGAGGACGGCTGGCAAGCCTAGCCCACGGCGTTTCTGTATAGTCGGCGAGCTGAGAACGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 72 bp TGCGGACGTCCTTGCTGCGGATGGGCGCCAGGAGGCTaGAGGAGGATTTGGCCGAGCGAAGGGAACAGTCGT +
Preference number: 6 (lower is better)
Translates to: CGRPCCGWAPGG*RRIWPSEGNSR
Trigger: ACGACTGTTCCCTTCGCTCGGCCAAATCCTCCTTCAGCCTCCTGGCGCCCATCCGCAGCAAGGACGTCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000674513.1
ENST00000676019.1
CDS TCA 72 bp ACTCCCGCCTGTCAGAACAGCCCTCCTGGACCCCGATaGCATACAGGTCCTGGGCATAGTCGGCCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: TPACQNSPPGPR*HTGPGHSRPRL
Trigger: CAGCCGAGGCCGACTATGCCCAGGACCTGTATGTCATCGGGGTCCAGGAGGGCTGTTCTGACAGGCGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371712.4
CDS GCA 72 bp CTTCTGGCCCTGCATGTTCCAGGTGGCCACGAAGAGTaGCACGTTCCGGTCTGGGAAGTAGCGGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLALHVPGGHEE*HVPVWEVAGQL
Trigger: GAGCTGGCCCGCTACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGCCAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000675256.1
ENST00000676019.1
CDS CCA 72 bp TGGGCGGGAGCTCCTTCTGGCCCTGCATGTTCCAGGTaGCCACGAAGAGTGCCACGTTCCGGTCTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: WAGAPSGPACSR*PRRVPRSGLGS
Trigger: ACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGCCAGAAGGAGCTCCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674513.1
ENST00000676019.1
CDS CCA 72 bp TTGAAGATGGACCCTTTCCGCATCTCCCGGATGAGCTaGTCGTGCTGCAGCAGCGCCGGCACGTCCACCACC +
Preference number: 6 (lower is better)
Translates to: LKMDPFRISRMS*SCCSSAGTSTT
Trigger: GGTGGTGGACGTGCCGGCGCTGCTGCAGCACGACCAGCTCATCCGGGAGATGCGGAAAGGGTCCATCTTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 72 bp TTCTGCATGAGGACGCTCAGGCTGGCTGCCACAGCCTaGGCCAGCTCTCCGAGCAAAAGGAACGGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: FCMRTLRLAATA*ASSPSKRNGWG
Trigger: TCCCCACCCGTTCCTTTTGCTCGGAGAGCTGGCCCAGGCTGTGGCAGCCAGCCTGAGCGTCCTCATGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp GCCACGTGGTCAGTCTGCCCAGCTCTGTCCAGAGCATaGTTAGTAACAGCAGGCCAGGGGCGGCCCTCACAG +
Preference number: 6 (lower is better)
Translates to: ATWSVCPALSRA*LVTAGQGRPSQ
Trigger: CTGTGAGGGCCGCCCCTGGCCTGCTGTTACTAACCATGCTCTGGACAGAGCTGGGCAGACTGACCACGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CAA 90 bp GCGATAGGGGTTGGTGTCGGGCACATTTCTGGGCAGGACCAGGGCTaGTACAGTCCTGGTGTAGTCCAGCAGCCGCTCCGCCACCTTCCC +
Preference number: 6 (lower is better)
Translates to: AIGVGVGHISGQDQG*YSPGVVQQPLRHLP
Trigger: GGGAAGGTGGCGGAGCGGCTGCTGGACTACACCAGGACTGTACAAGCCCTGGTCCTGCCCAGAAATGTGCCCGACACCAACCCCTATCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CAA 90 bp GCTGCGCGCGGAGCTTGTAGTCTGCAAGATCCGAGTCGACCTTGTTaGCTGTCCTCAGGGAGTCGGAGGCGATGTCCAGGCTCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: AARGACSLQDPSRPC*LSSGSRRRCPGSGQ
Trigger: CTGCCCTGAGCCTGGACATCGCCTCCGACTCCCTGAGGACAGCAAACAAGGTCGACTCGGATCTTGCAGACTACAAGCTCCGCGCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CAA 90 bp CACAGGAGGGCGTCCACGACTGTGCGCCCGCCACTCAGGCGGAAGTaGAAGTCTCCAAACCAGAACACCTCATCGAAGCGGGTGGTGACG +
Preference number: 6 (lower is better)
Translates to: HRRASTTVRPPLRRK*KSPNQNTSSKRVVT
Trigger: CGTCACCACCCGCTTCGATGAGGTGTTCTGGTTTGGAGACTTCAACTTCCGCCTGAGTGGCGGGCGCACAGTCGTGGACGCCCTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS GCA 72 bp CCGCACCAGGAGCGGCTGCGCGCGGAGCTTGTAGTCTaGAAGATCCGAGTCGACCTTGTTTGCTGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: PHQERLRAELVV*KIRVDLVCCPQ
Trigger: CTGAGGACAGCAAACAAGGTCGACTCGGATCTTGCAGACTACAAGCTCCGCGCGCAGCCGCTCCTGGTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 72 bp ATCCAGTGTCTGTCGCCGTGGGCTCTGCTACGGTGGTaGAAGAGCCACCAGGGGATGTGGACACAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: IQCLSPWALLRW*KSHQGMWTQGV
Trigger: CACCCCTTGTGTCCACATCCCCTGGTGGCTCTTGCACCACCGTAGCAGAGCCCACGGCGACAGACACTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 72 bp GATGTCCGGCTCCTGGAAGCCCTTGAAGATGGACCCTaGCACAGGATGGGCACTCGGACTGGCTCAGACCAG +
Preference number: 6 (lower is better)
Translates to: DVRLLEALEDGP*HRMGTRTGSDQ
Trigger: CTGGTCTGAGCCAGTCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS CCA 72 bp CCGGCAGCGCCCATCATGTCCACACCAGCAGCCACGTaGTCAGTCTGCCCAGCTCTGTCCAGAGCATGGTTA +
Preference number: 6 (lower is better)
Translates to: PAAPIMSTPAAT*SVCPALSRAWL
Trigger: TAACCATGCTCTGGACAGAGCTGGGCAGACTGACCACGTGGCTGCTGGTGTGGACATGATGGGCGCTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp GACATCCAGTGTCTGTCGCCGTGGGCTCTGCTACGGTaGTGCAAGAGCCACCAGGGGATGTGGACACAAGGG +
Preference number: 6 (lower is better)
Translates to: DIQCLSPWALLR*CKSHQGMWTQG
Trigger: CCCTTGTGTCCACATCCCCTGGTGGCTCTTGCACCACCGTAGCAGAGCCCACGGCGACAGACACTGGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 72 bp CGTCCACGACTGTGCGCCCGCCACTCAGGCGGAAGTTaGAGTCTCCAAACCAGAACACCTCATCGAAGCGGG +
Preference number: 6 (lower is better)
Translates to: RPRLCARHSGGS*SLQTRTPHRSG
Trigger: CCCGCTTCGATGAGGTGTTCTGGTTTGGAGACTTCAACTTCCGCCTGAGTGGCGGGCGCACAGTCGTGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 72 bp CGCAAGGGGACACGAGAGCATAGTGCCGGATTCCTGTaGCCTCCCGCGAGAACTTCTTCAACCCTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: RKGTREHSAGFL*PPARTSSTLAA
Trigger: CGCAGCCAGGGTTGAAGAAGTTCTCGCGGGAGGTCACAGGAATCCGGCACTATGCTCTCGTGTCCCCTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 72 bp ATGGGAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTTaGAGATGGACCCTGCCACAGGATGGGCACTCGGAC +
Preference number: 6 (lower is better)
Translates to: MGGSGCPAPGSP*RWTLPQDGHSD
Trigger: GTCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS GCA 72 bp CCAGCAGCCATTCTCAAACAGGGCGGACCCAGCCCGTaGACACGCGGCCCGCAAACTCAGAATGGGTTTTAC +
Preference number: 6 (lower is better)
Translates to: PAAILKQGGPSP*TRGPQTQNGFY
Trigger: GTAAAACCCATTCTGAGTTTGCGGGCCGCGTGTGCACGGGCTGGGTCCGCCCTGTTTGAGAATGGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp CTCCTCCCGAAACCTTCTGGCCCTGCATGTTCCAGGTaGCCACGAAGAGTGCCACGTTCCGGTCTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: LLPKPSGPACSR*PRRVPRSGLGS
Trigger: ACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGCCAGAAGGTTTCGGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675256.1
CDS CAA 72 bp GATGGGAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTaGAAGATGGACCCTGCCACAGGATGGGCACTCGGA +
Preference number: 6 (lower is better)
Translates to: DGRKWMSGSWKP*KMDPATGWALG
Trigger: TCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS TCA 72 bp GTGAAGCTGATGCCCAAGGCCCCCTTGGTCTTGATCTaGGACACGATGCGTGTGGTCACCGTGGAGCACTCC +
Preference number: 6 (lower is better)
Translates to: VKLMPKAPLVLI*DTMRVVTVEHS
Trigger: GGAGTGCTCCACGGTGACCACACGCATCGTGTCTCAGATCAAGACCAAGGGGGCCTTGGGCATCAGCTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS TCA 72 bp GTCATAGTGGGAGCATCTCAGGACAGGCCCCCAGACTaGGACCCCAAGACAAGACCAGGCTTGGGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: VIVGASQDRPPD*DPKTRPGLGEV
Trigger: GACCTCTCCCAAGCCTGGTCTTGTCTTGGGGTCTCAGTCTGGGGGCCTGTCCTGAGATGCTCCCACTATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 72 bp CACGATGCGTGTGGTCACCGTGGAGCACTCCACCTCTaGGCAGAACCAGATGAGGTCCCTGTCAGAACAGCC +
Preference number: 6 (lower is better)
Translates to: HDACGHRGALHL*AEPDEVPVRTA
Trigger: GGCTGTTCTGACAGGGACCTCATCTGGTTCTGCTCAGAGGTGGAGTGCTCCACGGTGACCACACGCATCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676019.1
CDS GCA 72 bp CTGTACAAGACGCGGTCCGTGTATGAGGGCGTCCTCTaGTTGGAGGTGCTGTCGTACGTGTCCTTCCCGATG +
Preference number: 6 (lower is better)
Translates to: LYKTRSVYEGVL*LEVLSYVSFPM
Trigger: CATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAGGACGCCCTCATACACGGACCGCGTCTTGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CCA 72 bp TCGACAATCCCGGTCGGGACAGCTGTGTTCACACAGTaGTCATTCGGGACAGAGAGCGTTCCTGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: STIPVGTAVFTQ*SFGTESVPVGT
Trigger: GGTGCCCACAGGAACGCTCTCTGTCCCGAATGACCACTGTGTGAACACAGCTGTCCCGACCGGGATTGTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CAA 72 bp GATGGGAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTaGAAGATGGACCCTTTCCGCATCTCCCGGATGAGC +
Preference number: 6 (lower is better)
Translates to: DGRKWMSGSWKP*KMDPFRISRMS
Trigger: GCTCATCCGGGAGATGCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CAA 90 bp AACTTGTATGATGGGAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTaGAAGATGGACCCTGCCACAGGATGGGCACTCGGACTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: NLYDGRKWMSGSWKP*KMDPATGWALGLAQ
Trigger: CTGAGCCAGTCCGAGTGCCCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS GCA 72 bp CGCGGTCCGTGTATGAGGGCGTCCTCTGCTTGGAGGTaGTGTCGTACGTGTCCTTCCCGATGTCAAACTTGT +
Preference number: 6 (lower is better)
Translates to: RGPCMRASSAWR*CRTCPSRCQTC
Trigger: ACAAGTTTGACATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAGGACGCCCTCATACACGGACCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CCA 72 bp ACAAGACGCGGTCCGTGTATGAGGGCGTCCTCTGCTTaGAGGTGCTGTCGTACGTGTCCTTCCCGATGTCAA +
Preference number: 6 (lower is better)
Translates to: TRRGPCMRASSA*RCCRTCPSRCQ
Trigger: TTGACATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAGGACGCCCTCATACACGGACCGCGTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CAA 72 bp GGAGCTTGTAGTCTGCAAGATCCGAGTCGACCTTGTTaGCTGTCCTCAGGGAGTCGGAGGCGATGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GACSLQDPSRPC*LSSGSRRRCPG
Trigger: GCCTGGACATCGCCTCCGACTCCCTGAGGACAGCAAACAAGGTCGACTCGGATCTTGCAGACTACAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS CAA 72 bp TACAAGACGCGGTCCGTGTATGAGGGCGTCCTCTGCTaGGAGGTGCTGTCGTACGTGTCCTTCCCGATGTCA +
Preference number: 6 (lower is better)
Translates to: YKTRSVYEGVLC*EVLSYVSFPMS
Trigger: TGACATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAGGACGCCCTCATACACGGACCGCGTCTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS TCA 72 bp AACACTTGTGCGGCTCCTTCTGGATACGCCGTCTTCTaGCATGGTTCCCTTCCGCAAGGGGACACGAGAGCA +
Preference number: 6 (lower is better)
Translates to: NTCAAPSGYAVF*HGSLPQGDTRA
Trigger: TGCTCTCGTGTCCCCTTGCGGAAGGGAACCATGTCAGAAGACGGCGTATCCAGAAGGAGCCGCACAAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS GCA 72 bp GAGCTTGTAGTCTGCAAGATCCGAGTCGACCTTGTTTaGTGTCCTCAGGGAGTCGGAGGCGATGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: ELVVCKIRVDLV*CPQGVGGDVQA
Trigger: AGCCTGGACATCGCCTCCGACTCCCTGAGGACAGCAAACAAGGTCGACTCGGATCTTGCAGACTACAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000635815.1
ENST00000676019.1
CDS GCA 72 bp CCCATCATGTCCACACCAGCAGCCACGTGGTCAGTCTaGCCAGCTCTGTCCAGAGCATGGTTAGTAACAGCA +
Preference number: 6 (lower is better)
Translates to: PIMSTPAATWSV*PALSRAWLVTA
Trigger: TGCTGTTACTAACCATGCTCTGGACAGAGCTGGGCAGACTGACCACGTGGCTGCTGGTGTGGACATGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp TTGTGCGGCTCCTTCTGGATACGCCGTCTTCTGACATaGTTCCCTTCCGCAAGGGGACACGAGAGCATAGTG +
Preference number: 6 (lower is better)
Translates to: LCGSFWIRRLLT*FPSARGHESIV
Trigger: CACTATGCTCTCGTGTCCCCTTGCGGAAGGGAACCATGTCAGAAGACGGCGTATCCAGAAGGAGCCGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CAA 90 bp CTCTGCTTGGAGGTGCTGTCGTACGTGTCCTTCCCGATGTCAAACTaGTATGATGGGAGGAAGTGGATGTCCGGCTCCTGGAAGCCCTTG +
Preference number: 6 (lower is better)
Translates to: LCLEVLSYVSFPMSN*YDGRKWMSGSWKPL
Trigger: CAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CAA 90 bp CGGCTTCTGTACAAGACGCGGTCCGTGTATGAGGGCGTCCTCTGCTaGGAGGTGCTGTCGTACGTGTCCTTCCCGATGTCAAACTTGTAT +
Preference number: 6 (lower is better)
Translates to: RLLYKTRSVYEGVLC*EVLSYVSFPMSNLY
Trigger: ATACAAGTTTGACATCGGGAAGGACACGTACGACAGCACCTCCAAGCAGAGGACGCCCTCATACACGGACCGCGTCTTGTACAGAAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS GCA 72 bp CCTGTGACCTCCCGCGAGAACTTCTTCAACCCTGGCTaGGGCTCACCAAGCTTCACTGGACACGTTAAATCA +
Preference number: 6 (lower is better)
Translates to: PVTSRENFFNPG*GSPSFTGHVKS
Trigger: TGATTTAACGTGTCCAGTGAAGCTTGGTGAGCCGCAGCCAGGGTTGAAGAAGTTCTCGCGGGAGGTCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp AACTTGTATGATGGGAGGAAGTGGATGTCCGGCTCCTaGAAGCCCTTGAAGATGGACCCTGCCACAGGATGG +
Preference number: 6 (lower is better)
Translates to: NLYDGRKWMSGS*KPLKMDPATGW
Trigger: CCATCCTGTGGCAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674693.1
CDS CAA 72 bp GAGGTGCTGTCGTACGTGTCCTTCCCGATGTCAAACTaGTATGATGGGAGGAAGTGGATGTCCGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: EVLSYVSFPMSN*YDGRKWMSGSW
Trigger: CCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGGGAAGGACACGTACGACAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CCA 72 bp AACTTGTATGATGGGAGGAAGTGGATGTCCGGCTCCTaGAAGCCCTTGAAGATGGACCCTTTCCGCATCTCC +
Preference number: 6 (lower is better)
Translates to: NLYDGRKWMSGS*KPLKMDPFRIS
Trigger: GGAGATGCGGAAAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 72 bp AGCCATGTCCACTCCCAGAGCCCCAGAACCTTGGAATaGGACCTTATTCGGAAACGGGGTCTTTGCAAACGT +
Preference number: 6 (lower is better)
Translates to: SHVHSQSPRTLE*DLIRKRGLCKR
Trigger: ACGTTTGCAAAGACCCCGTTTCCGAATAAGGTCCCATTCCAAGGTTCTGGGGCTCTGGGAGTGGACATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp ACCCAGCCCGTGCACACGCGGCCCGCAAACTCAGAATaGGTTTTACTGTGTGGAACGGCAGAGAAAGAAAAA +
Preference number: 6 (lower is better)
Translates to: TQPVHTRPANSE*VLLCGTAEKEK
Trigger: TTTTTCTTTCTCTGCCGTTCCACACAGTAAAACCCATTCTGAGTTTGCGGGCCGCGTGTGCACGGGCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 72 bp TCTACCTTAACACAACGTCACGCCCACGAATGGTTCTaGAACGCACAGGAAAAGTTCTGGGAAGGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: STLTQRHAHEWF*NAQEKFWEGRC
Trigger: GCAGCGCCCTTCCCAGAACTTTTCCTGTGCGTTTCAGAACCATTCGTGGGCGTGACGTTGTGTTAAGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp TCCTTCCCGATGTCAAACTTGTATGATGGGAGGAAGTaGATGTCCGGCTCCTGGAAGCCCTTGAAGATGGAC +
Preference number: 6 (lower is better)
Translates to: SFPMSNLYDGRK*MSGSWKPLKMD
Trigger: GTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTTTGACATCGGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371712.4
ENST00000674693.1
ENST00000676019.1
CDS CCA 72 bp CAGCTGGAGCCCACCAAAATGTTCCTCATGAGCAAGTaGCTAAACGAAAGTAGCCTCAACACATCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: QLEPTKMFLMSK*LNESSLNTSGA
Trigger: GGCCCCAGATGTGTTGAGGCTACTTTCGTTTAGCCACTTGCTCATGAGGAACATTTTGGTGGGCTCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CCA 72 bp AGTCCTCGTTCAGCAAACTTCAAGAAACGGAGCAGATaGTGCTGGAGTTCTGACTCTGTAGTGCTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SPRSANFKKRSR*CWSSDSVVLAA
Trigger: GGCAGCAAGCACTACAGAGTCAGAACTCCAGCACCATCTGCTCCGTTTCTTGAAGTTTGCTGAACGAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CAA 90 bp GAGCCCCAGAACCTTGGAATGGGACCTTATTCGGAAACGGGGTCTTaGCAAACGTGTTTAATTAAGGATCTCGAGATAAGACCACCCTGG +
Preference number: 6 (lower is better)
Translates to: EPQNLGMGPYSETGS*QTCLIKDLEIRPPW
Trigger: CCAGGGTGGTCTTATCTCGAGATCCTTAATTAAACACGTTTGCAAAGACCCCGTTTCCGAATAAGGTCCCATTCCAAGGTTCTGGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CAA 90 bp GAAATCCGTCTTTTAATTCCTAGTAAGTACAGTTCTCTATCAAATTaGCCAGCTGCCAACGGAATGTTGTCTCGCCCCGGCCTCACTTTC +
Preference number: 6 (lower is better)
Translates to: EIRLLIPSKYSSLSN*PAANGMLSRPGLTF
Trigger: GAAAGTGAGGCCGGGGCGAGACAACATTCCGTTGGCAGCTGGCAAATTTGATAGAGAACTGTACTTACTAGGAATTAAAAGACGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CAA 72 bp CTTTTAATTCCTAGTAAGTACAGTTCTCTATCAAATTaGCCAGCTGCCAACGGAATGTTGTCTCGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: LLIPSKYSSLSN*PAANGMLSRPG
Trigger: GCCGGGGCGAGACAACATTCCGTTGGCAGCTGGCAAATTTGATAGAGAACTGTACTTACTAGGAATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371712.4
ENST00000676019.1
CDS CCA 72 bp AACTGGGTTAAAGGATCCACGTCAACCCTCGTTTCCTaGTTGTTTGAAAACAATGACTTGAGGGTCCAAATT +
Preference number: 6 (lower is better)
Translates to: NWVKGSTSTLVS*LFENNDLRVQI
Trigger: AATTTGGACCCTCAAGTCATTGTTTTCAAACAACCAGGAAACGAGGGTTGACGTGGATCCTTTAACCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS CAA 72 bp AACCTTGGAATGGGACCTTATTCGGAAACGGGGTCTTaGCAAACGTGTTTAATTAAGGATCTCGAGATAAGA +
Preference number: 6 (lower is better)
Translates to: NLGMGPYSETGS*QTCLIKDLEIR
Trigger: TCTTATCTCGAGATCCTTAATTAAACACGTTTGCAAAGACCCCGTTTCCGAATAAGGTCCCATTCCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 72 bp TGGTTGTTTGAAAACAATGACTTGAGGGTCCAAATTTaGGACACGACTGTCCTTTTCTCTAACAGGTGTATC +
Preference number: 6 (lower is better)
Translates to: WLFENNDLRVQI*DTTVLFSNRCI
Trigger: GATACACCTGTTAGAGAAAAGGACAGTCGTGTCTCAAATTTGGACCCTCAAGTCATTGTTTTCAAACAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1
CDS TCA 72 bp GGTGTATCTACGTCAACCGGATCTAATTTTAAAATGTaGTGCTTTAGATGCACTAAGAAATCTCACTCTTTA +
Preference number: 6 (lower is better)
Translates to: GVSTSTGSNFKM*CFRCTKKSHSL
Trigger: TAAAGAGTGAGATTTCTTAGTGCATCTAAAGCATCACATTTTAAAATTAGATCCGGTTGACGTAGATACACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635815.1