RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INPP5B (Homo sapiens)

Ensembl gene IDs: ENSG00000204084

Ensembl transcript IDs: ENST00000373021.1, ENST00000373023.6, ENST00000373024.8, ENST00000373026.5, ENST00000373027.5, ENST00000458109.6, ENST00000467066.1, ENST00000470364.5, ENST00000474758.1, ENST00000487328.1, ENST00000491406.2

Found 874 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCTGCAGGTCCTCCCAGAGCACGGACTCACCCAAATTTCAGCCCTaGGCCTCCCATCTCCAAACGACAAGCTCCTGCTCAGCAACTGGC +
Preference number: 1 (lower is better)
Translates to: VCRSSQSTDSPKFQP*ASHLQTTSSCSATG
Trigger: GCCAGTTGCTGAGCAGGAGCTTGTCGTTTGGAGATGGGAGGCTCAGGGCTGAAATTTGGGTGAGTCCGTGCTCTGGGAGGACCTGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 90 bp GGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTaGCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCAGTC +
Preference number: 1 (lower is better)
Translates to: GSGVLAENTAPTSFC*HWPCPPPIVWILAV
Trigger: GACTGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 90 bp CCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTaGTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCA +
Preference number: 1 (lower is better)
Translates to: PGSGVLAENTAPTSF*CHWPCPPPIVWILA
Trigger: TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 90 bp GACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTaGCAGAGCCCCAACACATACCATACCTCACCCAAAGGAAGACTC +
Preference number: 1 (lower is better)
Translates to: DSSPVHCAIITGAEN*QSPNTYHTSPKGRL
Trigger: GAGTCTTCCTTTGGGTGAGGTATGGTATGTGTTGGGGCTCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CCA 90 bp GGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTGCCATTaGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCAGTCTCTTGT +
Preference number: 1 (lower is better)
Translates to: GVLAENTAPTSFCCH*PCPPPIVWILAVSC
Trigger: ACAAGAGACTGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CCA 90 bp AAGACTAAGGGAATGAAGTGCCTGCATGGCCTGGCTCTGGTGTACTaGCTGAGAACACAGCACCCACCTCTTTCTGCTGCCATTGGCCTT +
Preference number: 1 (lower is better)
Translates to: KTKGMKCLHGLALVY*LRTQHPPLSAAIGL
Trigger: AAGGCCAATGGCAGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATGCAGGCACTTCATTCCCTTAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 90 bp TGCCTGTATTGCCCTCAGAGGCTGAGCAACCAGCCTCAGAGTTATTaGGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCA +
Preference number: 1 (lower is better)
Translates to: CLYCPQRLSNQPQSY*AIIWAGTGVEFAYA
Trigger: TGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAATACAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 90 bp AAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTaGAATGAAGGAGAAACAAGCACCGAGGAAGTCCTCTGCTCACCT +
Preference number: 1 (lower is better)
Translates to: KLSAPSGASIAPCDG*NEGETSTEEVLCSP
Trigger: AGGTGAGCAGAGGACTTCCTCGGTGCTTGTTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CCA 90 bp CTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTaGCAGTCTCTTGTGAAGGGGCAAGGAGATGAGGTGCTCTTAAAC +
Preference number: 1 (lower is better)
Translates to: LSAAIGLVLRQLSGF*QSLVKGQGDEVLLN
Trigger: GTTTAAGAGCACCTCATCTCCTTGCCCCTTCACAAGAGACTGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 90 bp GAAGTCCTCTGCTCACCTCGTTTCCTCTCAGTTTACAAACTCTTGTaGAACATGCCACTCCTCCCTGCCCCTCATAGTTTCCAAGCCTTG +
Preference number: 1 (lower is better)
Translates to: EVLCSPRFLSVYKLL*NMPLLPAPHSFQAL
Trigger: CAAGGCTTGGAAACTATGAGGGGCAGGGAGGAGTGGCATGTTGCACAAGAGTTTGTAAACTGAGAGGAAACGAGGTGAGCAGAGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 90 bp TTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATaGATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: LLSHYLGRNGGRVCI*IYTSSDRALKASEV
Trigger: CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 90 bp TGTGATGGCTGCAATGAAGGAGAAACAAGCACCGAGGAAGTCCTCTaGTCACCTCGTTTCCTCTCAGTTTACAAACTCTTGTGCAACATG +
Preference number: 1 (lower is better)
Translates to: CDGCNEGETSTEEVL*SPRFLSVYKLLCNM
Trigger: CATGTTGCACAAGAGTTTGTAAACTGAGAGGAAACGAGGTGAGCAGAGGACTTCCTCGGTGCTTGTTTCTCCTTCATTGCAGCCATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 90 bp CCACACTTTACACAGCTACTTGACAGGCTCTTCATTGCTGGCAAATaGCTGTCACAAATAGGTACTAGGGGTCATGCCAAAGCTCACACA +
Preference number: 1 (lower is better)
Translates to: PHFTQLLDRLFIAGK*LSQIGTRGHAKAHT
Trigger: TGTGTGAGCTTTGGCATGACCCCTAGTACCTATTTGTGACAGTCATTTGCCAGCAATGAAGAGCCTGTCAAGTAGCTGTGTAAAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 90 bp TCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTaGATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCT +
Preference number: 1 (lower is better)
Translates to: SELLSHYLGRNGGRV*ICIYTSSDRALKAS
Trigger: AGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR TCA 90 bp TTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATT +
Preference number: 1 (lower is better)
Translates to: LHMHIHILRQSTESI*GGCSLFYPAASACI
Trigger: AATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 90 bp GTGGGCTTAATTGGGGTACTAGGCTCAGGAAATAGCTGCCATTCTTaGTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAG +
Preference number: 1 (lower is better)
Translates to: VGLIGVLGSGNSCHS*YQVASHNYLKASLE
Trigger: CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCCTAGTACCCCAATTAAGCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTaGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTC +
Preference number: 1 (lower is better)
Translates to: ILSSSFCLHSCHPTH*PFRTFHQISDHGDL
Trigger: GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 90 bp TATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTaGTGGCCCAGAAAATCCCACTTGTTTCACCGAACACTCATTTTT +
Preference number: 1 (lower is better)
Translates to: YYTWRQDASYTVWKT*WPRKSHLFHRTLIF
Trigger: AAAAATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAGTGAGCCGAGATCGTaGCACCGCACTCCACCCTGC +
Preference number: 2 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLSEPRS*HRTPPC
Trigger: GCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCGTGGCAGTGTGTGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 2 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCVAVCA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTGCAGGCACACACTGCCAC...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGTaGTCAAGTGAGCCACCCACG +
Preference number: 2 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCSLKLL*SSEPPT
Trigger: CGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCT...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGCTGTGTTGCCCAGCCTaGTCCCAAACTCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLLCCPA*SQTPGL
Trigger: GAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAG...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGCCTCAGACAGAGCACTaGAAGCATCTGAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLPQTEH*KHLRWL
Trigger: CAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGG...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTTCCAGCCCTGTACACTaGGCTATCATCACAGGGGCT +
Preference number: 2 (lower is better)
Translates to: HGLALVYWLRTQHPPLSASSPVH*AIITGA
Trigger: AGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGA...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR GCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGAGCACCAGGGGCCCTTaGAGAAAACCCTGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLSTRGP*RKPWSW
Trigger: CCAGCTCCAGGGTTTTCTGCAAGGGCCCCTGGTGCT...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CAA 90 bp CAGCACCCACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATaGTCTGGATTCTGGCAGTCTCTTGTGAAGGGGCAAGGAGATGAG +
Preference number: 2 (lower is better)
Translates to: QHPPLSAAIGLVLRQ*SGFWQSLVKGQGDE
Trigger: CTCATCTCCTTGCCCCTTCACAAGAGACTGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGTGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR TCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTAGGCAGAGGTTGCAGTaGGCCAAGACCACGCCAACG +
Preference number: 2 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTRQRLQ*AKTTPT
Trigger: CGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCT...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTT +
Preference number: 2 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLSTESI*GGCSLF
Trigger: AAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCACCGCACTCCACCCTaGGCGACAGAGCAAAACTCC +
Preference number: 2 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMHRTPP*ATEQNS
Trigger: GGAGTTTTGCTCTGTCGCGCAGGGTGGAGTGCGGTG...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CAA 90 bp ATGCCTGTATTGCCCTCAGAGGCTGAGCAACCAGCCTCAGAGTTATaGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGC +
Preference number: 2 (lower is better)
Translates to: MPVLPSEAEQPASEL*SHYLGRNGGRVCIC
Trigger: GCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAATACAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTCCCAAATTTCAGCCCTaGGCCTCCCATCTCCAAACG +
Preference number: 2 (lower is better)
Translates to: KPKEDANYQHHQALRSHLPKFQP*ASHLQT
Trigger: CGTTTGGAGATGGGAGGCTCAGGGCTGAAATTTGGG...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR TCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTCTTTACACAGCTACTTaGCAGGCTCTTCATTGCTGG +
Preference number: 2 (lower is better)
Translates to: HGLALVYWLRTQHPPLSALYTAT*QALHCW
Trigger: CCAGCAATGAAGAGCCTGTCAAGTAGCTGTGTAAAG...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR GCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGGGCGTGGCAGTGTGTaGCTGCAGTCCCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKGRGSV*LQSQLL
Trigger: GAGTAGCTGGGACTGCAGGCACACACTGCCACGCCC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGCAAACGACAAGCTCCTaGTCAGCAACTGGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLQTTSS*SATGLL
Trigger: CAGAAGGCCAGTTGCTGAGCAGGAGCTTGTCGTTTG...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR GCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTGCACCTTGTGATGGCTaGAATGAAGGAGAAACAAGC +
Preference number: 2 (lower is better)
Translates to: HGLALVYWLRTQHPPLSAAPCDG*NEGETS
Trigger: GCTTGTTTCTCCTTCATTGCAGCCATCACAAGGTGC...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGAAGAGCAAGCTCAGATaGAGCAACAGGCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLKSKLR*SNRPRE
Trigger: CTCTCTGGGCCTGTTGCTCCATCTGAGCTTGCTCTT...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTGAGCAAGTGGAGGGCTaGCCCACACTTTACACAGCT +
Preference number: 2 (lower is better)
Translates to: KPKEDANYQHHQALRSHLEQVEG*PTLYTA
Trigger: AGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTC...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR TCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCGGCAGGAGAATTGCTTaGACCAAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: AASACILAIQLIGLSGLSGRRIA*TKEAEV
Trigger: AACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCC...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCGCCCTGGAGGTAGGGTaGGTGAGTACAAGTACAGTT +
Preference number: 2 (lower is better)
Translates to: AASACILAIQLIGLSGLSALEVG*VSTSTV
Trigger: AACTGTACTTGTACTCACTCACCCTACCTCCAGGGC...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCCACCGCACTCCACCCTaGGCGACAGAGCAAAACTCC +
Preference number: 2 (lower is better)
Translates to: TSSDRALKASEVAVAYFIHRTPP*ATEQNS
Trigger: GGAGTTTTGCTCTGTCGCGCAGGGTGGAGTGCGGTG...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGTGGCAGTGTGTGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 2 (lower is better)
Translates to: TSSDRALKASEVAVAYFIVAVCA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTGCAGGCACACACTGCCAC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGGGCGTGGCAGTGTGTaGCTGCAGTCCCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: VCICIYTSSDRALKASEVGRGSV*LQSQLL
Trigger: GAGTAGCTGGGACTGCAGGCACACACTGCCACGCCC...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGATCTCAGCCCAGACTaGCTATGCCCTGGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKDLSPD*LCPGGR
Trigger: CCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACCCTCAGACAGAGCACTaGAAGCATCTGAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHPQTEH*KHLRWL
Trigger: CAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGG...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGATCGGAAGATCAGGATTaGAGAGCAAGCTCAGATGGA +
Preference number: 2 (lower is better)
Translates to: KTPALYTALSSQGLRTDRSEDQD*RASSDG
Trigger: TCCATCTGAGCTTGCTCTTCAATCCTGATCTTCCGA...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR GCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATACACCGCACTCCACCCTaGGCGACAGAGCAAAACTCC +
Preference number: 2 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIHRTPP*ATEQNS
Trigger: GGAGTTTTGCTCTGTCGCGCAGGGTGGAGTGCGGTG...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGTGGCAGTGTGTGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 2 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIVAVCA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTGCAGGCACACACTGCCAC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCAGCCTCAAACTCCTGTaGTCAAGTGAGCCACCCACG +
Preference number: 2 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPSLKLL*SSEPPT
Trigger: CGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 2 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGATCTCAGCCCAGACTaGCTATGCCCTGGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIDLSPD*LCPGGR
Trigger: CCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATTGCCCTCAGAGGCTaGGCAACCAGCCTCAGAGTT +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKIALRG*ATSLRV
Trigger: AACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAAT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAACTCCTGGTCTCAAGTaGTGCTCCCACCTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKTPGLK*CSHLSL
Trigger: GAGACTGAGGTGGGAGCATCACTTGAGACCAGGAGT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGCTCAGGAAATAGCTaGCATTCTTGCTACCAAGTG +
Preference number: 2 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWGSGNS*HSCYQV
Trigger: CACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCC...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCAGTTTACAAACTCTTGTaGAACATGCCACTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: TSFCCHWPCPPPIVWILAVYKLL*NMPLLP
Trigger: AGGGAGGAGTGGCATGTTGCACAAGAGTTTGTAAAC...TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCATTCTTGCTACCAAGTaGCCTCACATAATTATCTTA +
Preference number: 2 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCILATK*PHIIIL
Trigger: TAAGATAATTATGTGAGGCCACTTGGTAGCAAGAAT...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAGAGAGAGGCTCAGAGTaGGTTGCAGAGGAACTGGTG +
Preference number: 2 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEERGSE*VAEELV
Trigger: CACCAGTTCCTCTGCAACCCACTCTGAGCCTCTCTC...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458109.6
3UTR-3UTR TCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAGGCAGGAGAATTGCTTaGACCAAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQGRRIA*TKEAEV
Trigger: AACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCC...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTTCCATCAAATATCTaGTCATGGGGATCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTFPSNI*SWGSQP
Trigger: GGGCTGAGATCCCCATGATCAGATATTTGATGGAAA...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTT +
Preference number: 2 (lower is better)
Translates to: EPLSGQERGSSLHMHIHISTESI*GGCSLF
Trigger: AAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCT...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGGCAGGATAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TSSDRALKASEVAVAYFIGRIIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTGCAAGCAATTATCCTGCC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAACCAGCAGCTTCTGCCTaGATTCTTGCCATCCAACTC +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKPAASA*ILAIQL
Trigger: GAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGG...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAACTCAGTCTCCCAAAGTaGCGAGATTACAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: THGDRMHHIQFGRLAGPELSLPK*RDYRRE
Trigger: CTCACGCCTGTAATCTCGGCACTTTGGGAGACTGAG...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAAAATTAGCTGGGCGTaGCAGTGTGTGCCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKKISWA*QCVPAV
Trigger: GACTGCAGGCACACACTGCCACGCCCAGCTAATTTT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAAAATTAGCTGGGCGTaGCAGTGTGTGCCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFKISWA*QCVPAV
Trigger: GACTGCAGGCACACACTGCCACGCCCAGCTAATTTT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTGCCATCCAACTCATTaGCCTTTCAGGACTTTCCAT +
Preference number: 2 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTCHPTH*PFRTFH
Trigger: ATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCA...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAGCCTCCCAAGTAACTaGGACCACAGGCATGCATCA +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKSLPSN*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CAA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTaGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATC +
Preference number: 2 (lower is better)
Translates to: LRVIEPLSGQERGSS*HMHIHILRQSTESI
Trigger: GATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCGCCCTGGAGGTAGGGTaGGTGAGTACAAGTACAGTT +
Preference number: 2 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLALEVG*VSTSTV
Trigger: AACTGTACTTGTACTCACTCACCCTACCTCCAGGGC...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGTTTCCATCAAATATCTaGTCATGGGGATCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMFPSNI*SWGSQP
Trigger: GGGCTGAGATCCCCATGATCAGATATTTGATGGAAA...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACGGCTCAGGAAATAGCTaGCATTCTTGCTACCAAGTG +
Preference number: 2 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHGSGNS*HSCYQV
Trigger: CACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCC...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGGCAGGATAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VCICIYTSSDRALKASEVGRIIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTGCAAGCAATTATCCTGCC...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCAGCCTCAAACTCCTGTaGTCAAGTGAGCCACCCACG +
Preference number: 2 (lower is better)
Translates to: ILHMETGCIIYSLEDLLASLKLL*SSEPPT
Trigger: CGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCT...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAAAAATTAGCTGGGCGTaGCAGTGTGTGCCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIKISWA*QCVPAV
Trigger: GACTGCAGGCACACACTGCCACGCCCAGCTAATTTT...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CAA 90 bp GAGGTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTaGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATC +
Preference number: 2 (lower is better)
Translates to: EVAVAYFIQQLLPAF*PSNSLAFQDFPSNI
Trigger: GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCTTTCCATCAAATATCTaGTCATGGGGATCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPFPSNI*SWGSQP
Trigger: GGGCTGAGATCCCCATGATCAGATATTTGATGGAAA...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTT +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKSTESI*GGCSLF
Trigger: AAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCTTCTGCCTGCATTCTTaGCATCCAACTCATTGGCCT +
Preference number: 2 (lower is better)
Translates to: TSSDRALKASEVAVAYFIFCLHS*HPTHWP
Trigger: AGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCAATGGTGGGCTTAATTaGGGTACTAGGCTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPNGGLN*GTRLRK
Trigger: TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATGCCATCCAACTCATTaGCCTTTCAGGACTTTCCAT +
Preference number: 2 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKCHPTH*PFRTFH
Trigger: ATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCA...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTCTCCTGCTCAGCAACTaGCCTTCTGTGCTCCCCATT +
Preference number: 2 (lower is better)
Translates to: KTETVTIIPHQHMASLCFLLLSN*PSVLPI
Trigger: AATGGGGAGCACAGAAGGCCAGTTGCTGAGCAGGAG...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGATTCTTGCTACCAAGTaGCCTCACATAATTATCTTA +
Preference number: 2 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWILATK*PHIIIL
Trigger: TAAGATAATTATGTGAGGCCACTTGGTAGCAAGAAT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCAATGGTGGGCTTAATTaGGGTACTAGGCTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLNGGLN*GTRLRK
Trigger: TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATT...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGTCAGTTTTATTATGGTaGATTTTCTCCCGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMSVLLW*IFSRVF
Trigger: GAAGACACGGGAGAAAATCCACCATAATAAAACTGA...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGTGCCATCCAACTCATTaGCCTTTCAGGACTTTCCAT +
Preference number: 2 (lower is better)
Translates to: VCICIYTSSDRALKASEVCHPTH*PFRTFH
Trigger: ATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCA...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCTCAGTTTTATTATGGTaGATTTTCTCCCGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPSVLLW*IFSRVF
Trigger: GAAGACACGGGAGAAAATCCACCATAATAAAACTGA...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTACAGGCTCTTCATTGCTaGCAAATGACTGTCACAAAT +
Preference number: 2 (lower is better)
Translates to: LKGNERLRSLHISQSGQLQALHC*QMTVTN
Trigger: ATTTGTGACAGTCATTTGCCAGCAATGAAGAGCCTG...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGAATGGTGGGCTTAATTaGGGTACTAGGCTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQNGGLN*GTRLRK
Trigger: TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATT...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 2 (lower is better)
Translates to: TSSDRALKASEVAVAYFIMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CAA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTaGCTGGCCCAGAAAATCCCACTTGTTTCACCGAACACTCATTTT +
Preference number: 2 (lower is better)
Translates to: ILHMETGCIIYSLED*LAQKIPLVSPNTHF
Trigger: AAAATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 2 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CAA 90 bp ACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTTaGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCG +
Preference number: 2 (lower is better)
Translates to: TVTIIPHQHMASLCF*KGNERLRSLHISQS
Trigger: CGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAAAAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 72 bp CACCCGCCCCACGCGACAAACTCGGAAGATCAGGATTaGAGAGCAAGCTCAGATGGAGCAACAGGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: HPPHATNSEDQD*RASSDGATGPE
Trigger: CTCTGGGCCTGTTGCTCCATCTGAGCTTGCTCTTCAATCCTGATCTTCCGAGTTTGTCGCGTGGGGCGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CCA 72 bp GGAATGAAGTGCCTGCATGGCCTGGCTCTGGTGTACTaGCTGAGAACACAGCACCCACCTCTTTCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: GMKCLHGLALVY*LRTQHPPLSAA
Trigger: GGCAGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATGCAGGCACTTCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CAA 90 bp CAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTGCAATGAAGGAGAAAAAGCACCAGGGGCCCTaGCAGAAAACCCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: QHHQALRSHLVMAAMKEKKHQGP*QKTLEL
Trigger: CAGCTCCAGGGTTTTCTGCAAGGGCCCCTGGTGCTT...TTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 72 bp TCCTCCCAGAGCACGGACTCACCCAAATTTCAGCCCTaGGCCTCCCATCTCCAAACGACAAGCTCCTGCTCA +
Preference number: 3 (lower is better)
Translates to: SSQSTDSPKFQP*ASHLQTTSSCS
Trigger: TGAGCAGGAGCTTGTCGTTTGGAGATGGGAGGCTCAGGGCTGAAATTTGGGTGAGTCCGTGCTCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 72 bp GCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTaGAATGAAGGAGAAACAAGCACCGAGGAAGTCCTC +
Preference number: 3 (lower is better)
Translates to: APSGASIAPCDG*NEGETSTEEVL
Trigger: GAGGACTTCCTCGGTGCTTGTTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CCA 72 bp GCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTaGCAGTCTCTTGTGAAGGGGCAAGGAGATGAGGTG +
Preference number: 3 (lower is better)
Translates to: AIGLVLRQLSGF*QSLVKGQGDEV
Trigger: CACCTCATCTCCTTGCCCCTTCACAAGAGACTGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 72 bp TGGATTCTGGCAGTCTCTTGTGAAGGGGCAAGGAGATaGGGTGCTCTTAAACTCTCACCCGTCCCAGCACCA +
Preference number: 3 (lower is better)
Translates to: WILAVSCEGARR*GALKLSPVPAP
Trigger: TGGTGCTGGGACGGGTGAGAGTTTAAGAGCACCTCATCTCCTTGCCCCTTCACAAGAGACTGCCAGAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 72 bp CTAGCTGGCCTGACTTGTCATAGAAGACTAAGGGAATaGAGTGCCTGCATGGCCTGGCTCTGGTGTACTGGC +
Preference number: 3 (lower is better)
Translates to: LAGLTCHRRLRE*SACMAWLWCTG
Trigger: GCCAGTACACCAGAGCCAGGCCATGCAGGCACTTCATTCCCTTAGTCTTCTATGACAAGTCAGGCCAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CCA 72 bp TTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTaGATTCTGGCAGTCTCTTGTGAAGGGGCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: FCCHWPCPPPIV*ILAVSCEGARR
Trigger: TCTCCTTGCCCCTTCACAAGAGACTGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 72 bp CCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTaGCAGAGCCCCAACACATACCATACCTCACCCAAA +
Preference number: 3 (lower is better)
Translates to: PVHCAIITGAEN*QSPNTYHTSPK
Trigger: TTTGGGTGAGGTATGGTATGTGTTGGGGCTCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CCA 72 bp CTGCCCCTCATAGTTTCCAAGCCTTGTAAGAGCAAGTaGAGGGCTGGCCCACACTTTACACAGCTACTTGAC +
Preference number: 3 (lower is better)
Translates to: LPLIVSKPCKSK*RAGPHFTQLLD
Trigger: GTCAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGGAAACTATGAGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CAA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTCTCGGAAGATCAGGATaGAAGAGCAAGCTCAGATGG +
Preference number: 3 (lower is better)
Translates to: KPKEDANYQHHQALRSHLLGRSG*KSKLRW
Trigger: CCATCTGAGCTTGCTCTTCAATCCTGATCTTCCGAG...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CAA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCTTGCCATCCAACTCATaGGCCTTTCAGGACTTTCCA +
Preference number: 3 (lower is better)
Translates to: AASACILAIQLIGLSGLSLPSNS*AFQDFP
Trigger: TGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAA...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 72 bp GGTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTaGATTCTTGCCATCCAACTCATTGGCCTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: GGCSLFYPAASA*ILAIQLIGLSG
Trigger: TCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 72 bp TTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTaGATATGCATATACACATCCTCAGACAGAGCACTG +
Preference number: 3 (lower is better)
Translates to: LSHYLGRNGGRV*ICIYTSSDRAL
Trigger: CAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 72 bp CTCGTTTCCTCTCAGTTTACAAACTCTTGTGCAACATaGCACTCCTCCCTGCCCCTCATAGTTTCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: LVSSQFTNSCAT*HSSLPLIVSKP
Trigger: AGGCTTGGAAACTATGAGGGGCAGGGAGGAGTGGCATGTTGCACAAGAGTTTGTAAACTGAGAGGAAACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 72 bp TGCTCACCTCGTTTCCTCTCAGTTTACAAACTCTTGTaGAACATGCCACTCCTCCCTGCCCCTCATAGTTTC +
Preference number: 3 (lower is better)
Translates to: CSPRFLSVYKLL*NMPLLPAPHSF
Trigger: GAAACTATGAGGGGCAGGGAGGAGTGGCATGTTGCACAAGAGTTTGTAAACTGAGAGGAAACGAGGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR-3UTR CAA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCGAACGGGGGTCGAGTTaGCATATGCATATACACATC +
Preference number: 3 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIERGSS*HMHIHI
Trigger: GATGTGTATATGCATATGCAAACTCGACCCCCGTTC...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CAA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTTCAGTTTACAAACTCTaGTGCAACATGCCACTCCTC +
Preference number: 3 (lower is better)
Translates to: KPKEDANYQHHQALRSHLSVYKL*CNMPLL
Trigger: GAGGAGTGGCATGTTGCACAAGAGTTTGTAAACTGA...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR GCA 72 bp CATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATaGATATACACATCCTCAGACAGAGCACTGAAAGCA +
Preference number: 3 (lower is better)
Translates to: HYLGRNGGRVCI*IYTSSDRALKA
Trigger: TGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CAA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAATTGCCATCCAACTCATaGGCCTTTCAGGACTTTCCA +
Preference number: 3 (lower is better)
Translates to: THGDRMHHIQFGRLAGPELPSNS*AFQDFP
Trigger: TGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAA...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR-3UTR CAA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGAACGGGGGTCGAGTTaGCATATGCATATACACATC +
Preference number: 3 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKERGSS*HMHIHI
Trigger: GATGTGTATATGCATATGCAAACTCGACCCCCGTTC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR TCA 72 bp AACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTaGTCATGGGGATCTCAGCCCAGACTGACTATGCCC +
Preference number: 3 (lower is better)
Translates to: NSLAFQDFPSNI*SWGSQPRLTMP
Trigger: GGGCATAGTCAGTCTGGGCTGAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR GCA 72 bp TGCAATGAAGGAGAAACAAGCACCGAGGAAGTCCTCTaGTCACCTCGTTTCCTCTCAGTTTACAAACTCTTG +
Preference number: 3 (lower is better)
Translates to: CNEGETSTEEVL*SPRFLSVYKLL
Trigger: CAAGAGTTTGTAAACTGAGAGGAAACGAGGTGAGCAGAGGACTTCCTCGGTGCTTGTTTCTCCTTCATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR TCA 72 bp CATATACACATCCTCAGACAGAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTTTATCCAGCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: HIHILRQSTESI*GGCSLFYPAAS
Trigger: AGAAGCTGCTGGATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CCA 72 bp AGACAGGATGCATCATATACAGTTTGGAAGACTTGCTaGCCCAGAAAATCCCACTTGTTTCACCGAACACTC +
Preference number: 3 (lower is better)
Translates to: RQDASYTVWKTC*PRKSHLFHRTL
Trigger: GAGTGTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCGGAGCCCGCCCCCTGTaGCCGGGCCTCCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCGARPL*PGLLQS
Trigger: GGATTGGAGGAGGCCCGGCCACAGGGGGCGGGCTCC...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373023.6
CDS-3UTR CCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATGCCCCGAGCGTCCACTaGCCAAACCGCCGACCCTGC +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDAPSVH*PNRRPC
Trigger: GCAGGGTCGGCGGTTTGGCCAGTGGACGCTCGGGGC...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGGGGCCTGGATACCATTaGTCAGCCACAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLGPGYH*SATAGG
Trigger: GCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCC...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTGGAGCCCGCCCCCTGTaGCCGGGCCTCCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLGARPL*PGLLQS
Trigger: GGATTGGAGGAGGCCCGGCCACAGGGGGCGGGCTCC...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTGGGCCACCAGGACTTTaGTCTTCGCCCCGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: HGLALVYWLRTQHPPLSAGPPGL*SSPRAS
Trigger: GGACGCTCGGGGCGAAGACCAAAGTCCTGGTGGCCC...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAGGCAGAGGTTGCAGTaGGCCAAGACCACGCCAACG +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLRQRLQ*AKTTPT
Trigger: CGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTCCCAGGAGGCGGCTCTaGCGGCTGTCCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLPRRRL*RLSPSH
Trigger: GTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGG...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCATTGCCCTCAGAGGCTaGGCAACCAGCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCIALRG*ATSLRV
Trigger: AACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAAT...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATCCACAGACTGGTCCATaGTGGCCCCTGCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDPQTGP*WPLLSA
Trigger: TGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGG...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCCCCAGGAGGCGGCTCTaGCGGCTGTCCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIPRRRL*RLSPSH
Trigger: GTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGG...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCTACGAGGCTAAGCTCTaGTGTGTCCAGCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCYEAKL*CVQLDG
Trigger: ACCGTCCAGCTGGACACAGCAGAGCTTAGCCTCGTA...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTCCGAACCTGCAGTGTTaGGCTCCCGAGAGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLPNLQC*APESRR
Trigger: CCGCCGGCTCTCGGGAGCGCAACACTGCAGGTTCGG...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGAAAGAGAGCGTGTTCCTaGCCGCCGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KTPALYTALSSQGLRTDRKRACS*PPCSRR
Trigger: CCGCCTGGAGCACGGCGGCCAGGAACACGCTCTCTT...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATACAACCGCGCGGCGTTaGCATCTCCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDTTARR*HLQLQL
Trigger: GAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGT...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGGAGCTGACAGGCTTGTaGTCACTGGTCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLELTGL*SLVFRA
Trigger: GGCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTC...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATGAACTCCTGATCTTGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDELLIL*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACAAGATCAGGAGTTC...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTAACCACCTGCAGTGTTaGGCTCCCGAGAGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGNHLQC*APESRR
Trigger: CCGCCGGCTCTCGGGAGCGCAACACTGCAGGTGGTT...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAGCCTCTGCTGGGGTTaGCATTCAGCCACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLSLCWG*HSATAY
Trigger: GTAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGGAGAGAGGCTCAGAGTaGGTTGCAGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLERGSE*VAEELV
Trigger: CACCAGTTCCTCTGCAACCCACTCTGAGCCTCTCTC...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CAA 72 bp CCACCCGCCCCACGCGACAAACTCGGAAGATCAGGATaGAAGAGCAAGCTCAGATGGAGCAACAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPAPRDKLGRSG*KSKLRWSNRPR
Trigger: TCTGGGCCTGTTGCTCCATCTGAGCTTGCTCTTCAATCCTGATCTTCCGAGTTTGTCGCGTGGGGCGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCGCGCACACACCCTCCTaGGCTGTCACCACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPAHTPS*AVTTGR
Trigger: GCGCCCTGTGGTGACAGCTCAGGAGGGTGTGTGCGC...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR TCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCATGTGGGCTGCCAAGTaGGAATTCACAACGCAGATG +
Preference number: 4 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCMWAAK*EFTTQM
Trigger: CATCTGCGTTGTGAATTCTCACTTGGCAGCCCACAT...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTTCTGGCAGTCTCTTGTaGAGGGGCAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: HGLALVYWLRTQHPPLSASGSLL*RGKEMR
Trigger: CCTCATCTCCTTGCCCCTTCACAAGAGACTGCCAGA...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAACCCAGGAGGCGGCTCTaGCGGCTGTCCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKPRRRL*RLSPSH
Trigger: GTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGG...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGAGAACCCGCCCCCGTGTaGCCGCTCCATCAATCGAAA +
Preference number: 4 (lower is better)
Translates to: KTPALYTALSSQGLRTDREPAPV*PLHQSK
Trigger: TTTCGATTGATGGAGCGGGCACACGGGGGCGGGTTC...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCAAGAGAGCGTGTTCCTaGCCGCCGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIKRACS*PPCSRR
Trigger: CCGCCTGGAGCACGGCGGCCAGGAACACGCTCTCTT...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAAAATTAGCTGGGCGTaGCAGTGTGTGCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLKISWA*QCVPAV
Trigger: GACTGCAGGCACACACTGCCACGCCCAGCTAATTTT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTCTCCTGCTCAGCAACTaGCCTTCTGTGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: HGLALVYWLRTQHPPLSALLLSN*PSVLPI
Trigger: AATGGGGAGCACAGAAGGCCAGTTGCTGAGCAGGAG...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTCAGGCTGGAATGCAATaGCACGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HGLALVYWLRTQHPPLSAQAGMQ*HDLGSL
Trigger: CAGTGAGCCGAGATCGTGCCATTGCATTCCAGCCTG...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGCTTTCTGGTTTATCTTaGCCCCTGGAGCTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLLSGLS*PLELWS
Trigger: GGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAG...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCGATATGTTCAAATTCTaGCCTCAGGCCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCDMFKF*PQAWLL
Trigger: CAGCAACCAGGCCTGAGGTCAGAATTTGAACATATC...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR GCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAACGCACGGGACTCCGCTaGCCCAGGTTCCGGGACAGT +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKRTGLR*PRFRDS
Trigger: ACTGTCCCGGAACCTGGGGCAGCGGAGTCCCGTGCG...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373024.8
CDS-3UTR GCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGCCCAGGAGGCGGCTCTaGCGGCTGTCCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVPRRRL*RLSPSH
Trigger: GTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGG...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTTCCGGGACGGATACCTaGCTCCGCCAATTGTCGCGT +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLSGTDT*LRQLSR
Trigger: ACGCGACAATTGGCGGAGGCAGGTATCCGTCCCGGA...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCTCCGGGACGGATACCTaGCTCCGCCAATTGTCGCGT +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSSGTDT*LRQLSR
Trigger: ACGCGACAATTGGCGGAGGCAGGTATCCGTCCCGGA...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373023.6
CDS-3UTR GCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAATCCGGGACGGATACCTaGCTCCGCCAATTGTCGCGT +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKSGTDT*LRQLSR
Trigger: ACGCGACAATTGGCGGAGGCAGGTATCCGTCCCGGA...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373026.5
CDS-3UTR GCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACAACCACCTGCAGTGTTaGGCTCCCGAGAGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHNHLQC*APESRR
Trigger: CCGCCGGCTCTCGGGAGCGCAACACTGCAGGTGGTT...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373027.5
CDS-3UTR GCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCGGGCCTGGATACCATTaGTCAGCCACAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIGPGYH*SATAGG
Trigger: GCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCC...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATCACCGCACTCCACCCTaGGCGACAGAGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNHRTPP*ATEQNS
Trigger: GGAGTTTTGCTCTGTCGCGCAGGGTGGAGTGCGGTG...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCGTGGCAGTGTGTGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSVAVCA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTGCAGGCACACACTGCCAC...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACGGGCGTGGCAGTGTGTaGCTGCAGTCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNGRGSV*LQSQLL
Trigger: GAGTAGCTGGGACTGCAGGCACACACTGCCACGCCC...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTCAAACGACAAGCTCCTaGTCAGCAACTGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HGLALVYWLRTQHPPLSAQTTSS*SATGLL
Trigger: CAGAAGGCCAGTTGCTGAGCAGGAGCTTGTCGTTTG...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGTGGATTGCCACAGACTaGTCCATGCTGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLWIATD*SMLAPA
Trigger: AGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCA...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGTCAGCCAGCGTCTCCTaGATTGCCACAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLSASVS*IATDWS
Trigger: GGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGA...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATTCTGCTGTGTCCAGCTaGACGGTCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDSAVSS*TVTSEP
Trigger: TGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGA...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGACGCAGAATCGAAGCCTaGACAGGCCCTGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: KTPALYTALSSQGLRTDRRRIEA*TGPGNF
Trigger: GAAGTTGCCAGGGCCTGTCCAGGCTTCGATTCTGCG...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGACAACCGCGCGGCGTTaGCATCTCCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMTTARR*HLQLQL
Trigger: GAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGT...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGGAGCCCGCCCCCTGTaGCCGGGCCTCCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQGARPL*PGLLQS
Trigger: GGATTGGAGGAGGCCCGGCCACAGGGGGCGGGCTCC...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373026.5
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGTCACAACGCAGATGCTaGTGTTGTGGAACTGGAACC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLSQRRC*CCGTGT
Trigger: GGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGA...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGCGCACACACCCTCCTaGGCTGTCACCACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGAHTPS*AVTTGR
Trigger: GCGCCCTGTGGTGACAGCTCAGGAGGGTGTGTGCGC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR TCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAATGTGGAACTGGAACCTaGTCGCCACGCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKCGTGT*SPRLPC
Trigger: ACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACA...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGATCTCAGCCCAGACTaGCTATGCCCTGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNDLSPD*LCPGGR
Trigger: CCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATC...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGATCTCAGCCCAGACTaGCTATGCCCTGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWDLSPD*LCPGGR
Trigger: CCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATC...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCACAGCGTCTCCTGGATTaGCACAGACTGGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: TSFCCHWPCPPPIVWILAQRLLD*HRLVHA
Trigger: AGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTG...TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGCCCAGGAGGCGGCTCTaGCGGCTGTCCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQPRRRL*RLSPSH
Trigger: GTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGG...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR GCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTCTCCAGCTCCAGCTCTaGGCACCTATACCGAGACAG +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLLQLQL*APIPRQ
Trigger: CTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAG...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCAGTGAGCCGAGATCGTaGCACCGCACTCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPSEPRS*HRTPPC
Trigger: GCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTAGCCGCCCGCCGAACCTaGAGTGTTGCGCTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLAARRT*SVALPR
Trigger: TCTCGGGAGCGCAACACTGCAGGTTCGGCGGGCGGC...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATACCGAGGAAGTCCTCTaGTCACCTCGTTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDTEEVL*SPRFLS
Trigger: TGAGAGGAAACGAGGTGAGCAGAGGACTTCCTCGGT...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACCAGACTGGTCCATGCTaGCCCCTGCTGAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHQTGPC*PLLSAH
Trigger: GTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTG...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAGAGAGCGTGTTCCTaGCCGCCGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEKRACS*PPCSRR
Trigger: CCGCCTGGAGCACGGCGGCCAGGAACACGCTCTCTT...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATGAGACTGGCACTATCTaGTCCAGAGAGACATCGTCC +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDETGTI*SRETSS
Trigger: GGACGATGTCTCTCTGGACCAGATAGTGCCAGTCTC...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTGTAGAGTTCACCATCTaGGGACACTTCTTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: HGLALVYWLRTQHPPLSAVEFTI*GHFFQR
Trigger: ACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTAC...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTAGCCTGGACAGGCCCTaGCAACTTCGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLSLDRP*QLRGGT
Trigger: TGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGCT...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTAGCCTGGACAGGCCCTaGCAACTTCGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGSLDRP*QLRGGT
Trigger: TGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGCT...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTGAGCTGACAGGCTTGTaGTCACTGGTCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTELTGL*SLVFRA
Trigger: GGCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTC...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGAGCTGACAGGCTTGTaGTCACTGGTCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGELTGL*SLVFRA
Trigger: GGCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAACAGAACTCTCGCTTaGACAGGGACACAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLNRTLA*TGTQKE
Trigger: TTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGGAGGAAGCCTCTGCTaGGGTTGGCATTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGGGSLC*GWHSAT
Trigger: AGTGGCTGAATGCCAACCCCAGCAGAGGCTTCCTCC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTGCAATGAAGGAGAAAGAGCAAGTGGAGGGCTaGCCCACACTTTACACAGCT +
Preference number: 4 (lower is better)
Translates to: QHHQALRSHLVMAAMKEKEQVEG*PTLYTA
Trigger: AGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTC...TTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTTCTTTCTGCTGCCATTaGCCTTGTCCTCCGCCAATT +
Preference number: 4 (lower is better)
Translates to: HGLALVYWLRTQHPPLSASFCCH*PCPPPI
Trigger: AATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGA...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp ACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCACTGGCTCTGGTGTACTaGCTGAGAACACAGCACCCA +
Preference number: 4 (lower is better)
Translates to: TSFCCHWPCPPPIVWILALALVY*LRTQHP
Trigger: TGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAG...TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CAA 72 bp CCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATaGTCTGGATTCTGGCAGTCTCTTGTGAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PLSAAIGLVLRQ*SGFWQSLVKGQ
Trigger: TTGCCCCTTCACAAGAGACTGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGCGCACACACCCTCCTaGGCTGTCACCACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQAHTPS*AVTTGR
Trigger: GCGCCCTGTGGTGACAGCTCAGGAGGGTGTGTGCGC...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR TCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGCTGGACGGTCACATCTaGGCCAAGGATGTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLLDGHI*AKDVEF
Trigger: GAACTCTACATCCTTGGCTCAGATGTGACCGTCCAG...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAACCCGATGTCAAACACTaGGCTGACAGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKPDVKH*ADRLVV
Trigger: GACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGG...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCCCTCAGACAGAGCACTaGAAGCATCTGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSPQTEH*KHLRWL
Trigger: CAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGG...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTCCTCAGACAGAGCACTaGAAGCATCTGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGPQTEH*KHLRWL
Trigger: CAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGG...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATATTGCCCTCAGAGGCTaGGCAACCAGCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNIALRG*ATSLRV
Trigger: AACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAAT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATTGCCCTCAGAGGCTaGGCAACCAGCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSIALRG*ATSLRV
Trigger: AACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAAT...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCACTCCTGGTCTCAAGTaGTGCTCCCACCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSTPGLK*CSHLSL
Trigger: GAGACTGAGGTGGGAGCATCACTTGAGACCAGGAGT...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGACTCCTGGTCTCAAGTaGTGCTCCCACCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWTPGLK*CSHLSL
Trigger: GAGACTGAGGTGGGAGCATCACTTGAGACCAGGAGT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTACTCCTGGTCTCAAGTaGTGCTCCCACCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTTPGLK*CSHLSL
Trigger: GAGACTGAGGTGGGAGCATCACTTGAGACCAGGAGT...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATGAAGGGGCAAGGAGATaGGGTGCTCTTAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDEGARR*GALKLS
Trigger: TGAGAGTTTAAGAGCACCTCATCTCCTTGCCCCTTC...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCTCCAGCTCCAGCTCTaGGCACCTATACCGAGACAG +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMLQLQL*APIPRQ
Trigger: CTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAG...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCGAACCCGCCCCCGTGTaGCCGCTCCATCAATCGAAA +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPEPAPV*PLHQSK
Trigger: TTTCGATTGATGGAGCGGGCACACGGGGGCGGGTTC...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373023.6
CDS-3UTR GCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGGGCCTGGATACCATTaGTCAGCCACAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKGPGYH*SATAGG
Trigger: GCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGGGCCTGGATACCATTaGTCAGCCACAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVGPGYH*SATAGG
Trigger: GCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACCACCGCACTCCACCCTaGGCGACAGAGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHHRTPP*ATEQNS
Trigger: GGAGTTTTGCTCTGTCGCGCAGGGTGGAGTGCGGTG...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGTGAGCCGAGATCGTaGCACCGCACTCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFSEPRS*HRTPPC
Trigger: GCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGGGCGTGGCAGTGTGTaGCTGCAGTCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVGRGSV*LQSQLL
Trigger: GAGTAGCTGGGACTGCAGGCACACACTGCCACGCCC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGGGCGTGGCAGTGTGTaGCTGCAGTCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSGRGSV*LQSQLL
Trigger: GAGTAGCTGGGACTGCAGGCACACACTGCCACGCCC...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAACGGGGGTCGAGTTTaGATATGCATATACACATCC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLNGGRV*ICIYTS
Trigger: GGATGTGTATATGCATATGCAAACTCGACCCCCGTT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTAGCCTCAAACTCCTGTaGTCAAGTGAGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTSLKLL*SSEPPT
Trigger: CGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCT...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGGCAACTGGCCTTCTGTaGTCCCCATTATCCACCAAC +
Preference number: 4 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLATGLL*SPLSTN
Trigger: GTTGGTGGATAATGGGGAGCACAGAAGGCCAGTTGC...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTAACTCTTGTGCAACATaGCACTCCTCCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLNSCAT*HSSLPL
Trigger: GAGGGGCAGGGAGGAGTGGCATGTTGCACAAGAGTT...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATCGTGGAGGAACATCCTaGTTTGTGAACCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDRGGTS*FVNQRA
Trigger: TGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACG...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGGCCCTGGCAACTTCGTaGAGGAACATCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLALATS*RNILVC
Trigger: ACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGC...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACAGCCTGGACAGGCCCTaGCAACTTCGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNSLDRP*QLRGGT
Trigger: TGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGCT...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCACAACCGCGCGGCGTTaGCATCTCCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFITTARR*HLQLQL
Trigger: GAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGT...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTCTGGTGTTGTGGAACTaGAACCTGATCGCCACGCCT +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGLVLWN*NLIATP
Trigger: AGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAG...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTGAGAGGGGGAAGGCTTaGGTCAGGCTGACAAAACTG +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTERGKA*VRLTKL
Trigger: CAGTTTTGTCAGCCTGACCCAAGCCTTCCCCCTCTC...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCCTCTCTCACCCGGGCTaGCGTACAGTGATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHILSHPG*RTVMWS
Trigger: TGACCACATCACTGTACGCCAGCCCGGGTGAGAGAG...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGGCATCATATACAGTTTaGAAGACTTGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLASYTV*KTCWPR
Trigger: TCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGC...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTGCAATGAAGGAGAAAAAGAGCAAGCTCAGATaGAGCAACAGGCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QHHQALRSHLVMAAMKEKKSKLR*SNRPRE
Trigger: CTCTCTGGGCCTGTTGCTCCATCTGAGCTTGCTCTT...TTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGAGCCTCCAGAGTACATaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLSLQST*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCATGTACTCTGGAGGCT...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CAA 72 bp GCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTaGACAGGCTCTTCATTGCTGGCAAATGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: ASGGLAHTLHSY*TGSSLLANDCH
Trigger: GTGACAGTCATTTGCCAGCAATGAAGAGCCTGTCAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGTGTCAAACACTGAGCTaGCAGGCTTGTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWCQTLS*QACGHW
Trigger: CCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACA...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGTATCCAAGCAGTCCCTaGTATGTTCAAATTCTGACC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLYPSSP*YVQILT
Trigger: GGTCAGAATTTGAACATATCAGGGACTGCTTGGATA...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAGGCAGAGGTTGCAGTaGGCCAAGACCACGCCAACG +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKRQRLQ*AKTTPT
Trigger: CGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGGCAGAGGTTGCAGTaGGCCAAGACCACGCCAACG +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPERQRLQ*AKTTPT
Trigger: CGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCT...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGCAGGAGAATTGCTTaGACCAAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWGRRIA*TKEAEV
Trigger: AACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCC...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGCCCTGGAGGTAGGGTaGGTGAGTACAAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGALEVG*VSTSTV
Trigger: AACTGTACTTGTACTCACTCACCCTACCTCCAGGGC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCCTCAGACAGAGCACTaGAAGCATCTGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMPQTEH*KHLRWL
Trigger: CAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGG...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGATTGCCCTCAGAGGCTaGGCAACCAGCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMIALRG*ATSLRV
Trigger: AACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAAT...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAACTCCTGTGCTCAAGTaGGCCACCCACGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKTPVLK*ATHVSL
Trigger: GAGGCTGACGTGGGTGGCTCACTTGAGCACAGGAGT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCACTCCTGTGCTCAAGTaGGCCACCCACGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFTPVLK*ATHVSL
Trigger: GAGGCTGACGTGGGTGGCTCACTTGAGCACAGGAGT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATCTTTACACAGCTACTTaGCAGGCTCTTCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDLYTAT*QALHCW
Trigger: CCAGCAATGAAGAGCCTGTCAAGTAGCTGTGTAAAG...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACGCACGGGACTCCGCTaGCCCAGGTTCCGGGACAGT +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKRTGLR*PRFRDS
Trigger: ACTGTCCCGGAACCTGGGGCAGCGGAGTCCCGTGCG...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373024.8
CDS-3UTR GCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCCCACAGACTGGTCCATaGTGGCCCCTGCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIPQTGP*WPLLSA
Trigger: TGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGG...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCCCACAGACTGGTCCATaGTGGCCCCTGCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSPQTGP*WPLLSA
Trigger: TGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGG...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGAACCCGCCCCCGTGTaGCCGCTCCATCAATCGAAA +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVEPAPV*PLHQSK
Trigger: TTTCGATTGATGGAGCGGGCACACGGGGGCGGGTTC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373026.5
CDS-3UTR GCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGGGCCTGGATACCATTaGTCAGCCACAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGGPGYH*SATAGG
Trigger: GCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGAATGACCTGTTTGCTTaGTGTGTAGTTGCCAGAACA +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLNDLFA*CVVART
Trigger: TGTTCTGGCAACTACACAGCAAGCAAACAGGTCATT...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR GCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCAGTGAGCCGAGATCGTaGCACCGCACTCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLSEPRS*HRTPPC
Trigger: GCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACT...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAACCAGCAGCTTCTGCCTaGATTCTTGCCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKPAASA*ILAIQL
Trigger: GAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGG...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGCCAGCAGCTTCTGCCTaGATTCTTGCCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWPAASA*ILAIQL
Trigger: GAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGG...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGGGTCGAGTTTGCATATaGATATACACATCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLGRVCI*IYTSSD
Trigger: GTCTGAGGATGTGTATATGCATATGCAAACTCGACC...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTCTCAGTCTCCCAAAGTaGCGAGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGLSLPK*RDYRRE
Trigger: CTCACGCCTGTAATCTCGGCACTTTGGGAGACTGAG...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGTGGTCATAGGTCACTaGAGCCTCAAACTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGVVIGH*SLKLLC
Trigger: GCACAGGAGTTTGAGGCTGCAGTGACCTATGACCAC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTGTGGTCATAGGTCACTaGAGCCTCAAACTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTVVIGH*SLKLLC
Trigger: GCACAGGAGTTTGAGGCTGCAGTGACCTATGACCAC...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTACAGACTGGTCCATGCTaGCCCCTGCTGAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLQTGPC*PLLSAH
Trigger: GTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTG...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCCAGACTGGTCCATGCTaGCCCCTGCTGAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIQTGPC*PLLSAH
Trigger: GTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTG...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATACAGACTGGTCCATGCTaGCCCCTGCTGAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIQTGPC*PLLSAH
Trigger: GTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTG...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACTCAGCCAGCGTCTCCTaGATTGCCACAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHSASVS*IATDWS
Trigger: GGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGA...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCAAGAGAGCGTGTTCCTaGCCGCCGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAKRACS*PPCSRR
Trigger: CCGCCTGGAGCACGGCGGCCAGGAACACGCTCTCTT...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGAAGAGAGCGTGTTCCTaGCCGCCGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEKRACS*PPCSRR
Trigger: CCGCCTGGAGCACGGCGGCCAGGAACACGCTCTCTT...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCTGCTGTGTCCAGCTaGACGGTCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNSAVSS*TVTSEP
Trigger: TGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGA...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCACAACCGCGCGGCGTTaGCATCTCCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRTTARR*HLQLQL
Trigger: GAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGT...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGCCGGAGGCATTCTTTaGGGGACTGCCCATTTACAT +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGAGGIL*GTAHLH
Trigger: ATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAGCCGGAGGCATTCTTTaGGGGACTGCCCATTTACAT +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKAGGIL*GTAHLH
Trigger: ATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGC...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACGAGAGGGGGAAGGCTTaGGTCAGGCTGACAAAACTG +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNERGKA*VRLTKL
Trigger: CAGTTTTGTCAGCCTGACCCAAGCCTTCCCCCTCTC...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACCACGGCACTTCTCACTaGTATCCCAGTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNHGTSH*YPSRQS
Trigger: GCTCTGACGACTGGGATACCAGTGAGAAGTGCCGTG...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAATGGGGCTATCCAACTaGCTCCCATCATCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKMGLSN*LPSSPV
Trigger: GACTGGAGATGATGGGAGCCAGTTGGATAGCCCCAT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCAAAATTAGCTGGGCGTaGCAGTGTGTGCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSKISWA*QCVPAV
Trigger: GACTGCAGGCACACACTGCCACGCCCAGCTAATTTT...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCCTGTGTTGCCCAGCCTaGTCCCAAACTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPLCCPA*SQTPGL
Trigger: GAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAG...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGACCTCCGCCAATTGTCTaGATTCTGGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KTPALYTALSSQGLRTDRPPPIV*ILAVSC
Trigger: ACAAGAGACTGCCAGAATCCAGACAATTGGCGGAGG...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAACTTTCTGGTTTATCTTaGCCCCTGGAGCTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKLSGLS*PLELWS
Trigger: GGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAG...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTGTGGAACTGGAACCTaGTCGCCACGCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGCGTGT*SPRLPC
Trigger: ACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATGTGGAACTGGAACCTaGTCGCCACGCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKCGTGT*SPRLPC
Trigger: ACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACA...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGATGTGGGCTGCCAAGTaGGAATTCACAACGCAGATG +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWMWAAK*EFTTQM
Trigger: CATCTGCGTTGTGAATTCTCACTTGGCAGCCCACAT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAAGGCTTGGGTCAGGCTaGCAAAACTGCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKRLGSG*QNCIRE
Trigger: TTCTCGAATGCAGTTTTGTCAGCCTGACCCAAGCCT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATAGGCTTGGGTCAGGCTaGCAAAACTGCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNRLGSG*QNCIRE
Trigger: TTCTCGAATGCAGTTTTGTCAGCCTGACCCAAGCCT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGCTTCGGCTACAGAATaGTTGCTGGCAGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGASATE*LLAERL
Trigger: TAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR TCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCAGGCAGAGGTTGCAGTaGGCCAAGACCACGCCAACG +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIRQRLQ*AKTTPT
Trigger: CGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCT...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCACTCCTGTGCTCAAGTaGGCCACCCACGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRTPVLK*ATHVSL
Trigger: GAGGCTGACGTGGGTGGCTCACTTGAGCACAGGAGT...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCATCGGAAGATCAGGATTaGAGAGCAAGCTCAGATGGA +
Preference number: 4 (lower is better)
Translates to: TSFCCHWPCPPPIVWILASEDQD*RASSDG
Trigger: TCCATCTGAGCTTGCTCTTCAATCCTGATCTTCCGA...TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGACTCTGGAAACAGAGATaGCCCAAACAGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: KTPALYTALSSQGLRTDRLWKQR*PKQNWR
Trigger: TCTCCAGTTCTGTTTGGGTCATCTCTGTTTCCAGAG...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAACTCCAGCTCCAGCTCTaGGCACCTATACCGAGACAG +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPELQLQL*APIPRQ
Trigger: CTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAG...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAACTCCAGCTCCAGCTCTaGGCACCTATACCGAGACAG +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQLQLQL*APIPRQ
Trigger: CTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAG...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTACTCCAGCTCCAGCTCTaGGCACCTATACCGAGACAG +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVLQLQL*APIPRQ
Trigger: CTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAG...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTAACCACCTGCAGTGTTaGGCTCCCGAGAGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVINHLQC*APESRR
Trigger: CCGCCGGCTCTCGGGAGCGCAACACTGCAGGTGGTT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAAAAGTTAGAACCACCTaGAGTGTTGCGCTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKKVRTT*SVALPR
Trigger: TCTCGGGAGCGCAACACTGCAGGTGGTTCTAACTTT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGCACCGCACTCCACCCTaGGCGACAGAGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVHRTPP*ATEQNS
Trigger: GGAGTTTTGCTCTGTCGCGCAGGGTGGAGTGCGGTG...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGGGCAGGATAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMGRIIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTGCAAGCAATTATCCTGCC...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCGTGGCAGTGTGTGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIVAVCA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTGCAGGCACACACTGCCAC...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTGCAATGAAGGAGAAAGCACCTTGTGATGGCTaGAATGAAGGAGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: QHHQALRSHLVMAAMKEKAPCDG*NEGETS
Trigger: GCTTGTTTCTCCTTCATTGCAGCCATCACAAGGTGC...TTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACGAGACTGGCACTATCTaGTCCAGAGAGACATCGTCC +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNETGTI*SRETSS
Trigger: GGACGATGTCTCTCTGGACCAGATAGTGCCAGTCTC...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGAAAATCCCGCGAGACTaGCACTATCTGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWKIPRD*HYLVQR
Trigger: TCTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAAAAATCCCGCGAGACTaGCACTATCTGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKKIPRD*HYLVQR
Trigger: TCTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAGTAGAGTTCACCATCTaGGGACACTTCTTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKVEFTI*GHFFQR
Trigger: ACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTAC...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACTCTGCTGTGTCCAGCTaGACGGTCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHSAVSS*TVTSEP
Trigger: TGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGA...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTGCAATGAAGGAGAAAGAACCAAAGGGCAGTTaGAATACGAGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QHHQALRSHLVMAAMKEKEPKGS*NTRLSS
Trigger: AGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTC...TTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAAGCCTGGACAGGCCCTaGCAACTTCGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQSLDRP*QLRGGT
Trigger: TGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGCT...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGACAACCGCGCGGCGTTaGCATCTCCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLETTARR*HLQLQL
Trigger: GAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGT...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCCTGGTGTTGTGGAACTaGAACCTGATCGCCACGCCT +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPLVLWN*NLIATP
Trigger: AGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAG...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGGAGGAAGCCTCTGCTaGGGTTGGCATTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIGGSLC*GWHSAT
Trigger: AGTGGCTGAATGCCAACCCCAGCAGAGGCTTCCTCC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGATGGGGCTATCCAACTaGCTCCCATCATCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMMGLSN*LPSSPV
Trigger: GACTGGAGATGATGGGAGCCAGTTGGATAGCCCCAT...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATACAGATGACAGGCTCTaGAAGGCTCTCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNTDDRL*KALQEK
Trigger: CTTTTCCTGGAGAGCCTTCCAGAGCCTGTCATCTGT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCTCAGTTTTATTATGGTaGATTTTCTCCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCSVLLW*IFSRVF
Trigger: GAAGACACGGGAGAAAATCCACCATAATAAAACTGA...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACAGCCTCCCAAGTAACTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNSLPSN*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCT...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTACTCTCTCACCCGGGCTaGCGTACAGTGATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVLSHPG*RTVMWS
Trigger: TGACCACATCACTGTACGCCAGCCCGGGTGAGAGAG...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGTGGATGAAGACCCTCTaGCACAGCTTTGAACCACTC +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMWMKTL*HSFEPL
Trigger: GAGTGGTTCAAAGCTGTGTCAGAGGGTCTTCATCCA...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGTATTTGGCATCTGGATaGAGACCCTCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWYLASG*RPSDTA
Trigger: AGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAATA...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAATATTTGGCATCTGGATaGAGACCCTCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKYLASG*RPSDTA
Trigger: AGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAATA...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCTGTGGAACTGGAACCTaGTCGCCACGCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLCGTGT*SPRLPC
Trigger: ACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACA...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGTGGAACTGGAACCTaGTCGCCACGCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNICGTGT*SPRLPC
Trigger: ACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACA...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTGGTAACTCAGCTGAGTaGTGTTCTTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTGNSAE*CSSLSR
Trigger: TCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACC...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTACCCGATGTCAAACACTaGGCTGACAGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVPDVKH*ADRLVV
Trigger: GACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGG...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTACTCAGGCCTGGTTGCTaGAACAGATCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVLRPGC*NRSSCW
Trigger: CCAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAG...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR TCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCGATATGTTCAAATTCTaGCCTCAGGCCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSDMFKF*PQAWLL
Trigger: CAGCAACCAGGCCTGAGGTCAGAATTTGAACATATC...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR TCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGGCTTCGGCTACAGAATaGTTGCTGGCAGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMASATE*LLAERL
Trigger: TAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGC...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR TCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAATATCAAGCTTTTGGTaGCCAGCTGGGTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKISSFW*PAGFRS
Trigger: GCTTCGAAACCCAGCTGGTCACCAAAAGCTTGATAT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCGATCTCAGCCCAGACTaGCTATGCCCTGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLDLSPD*LCPGGR
Trigger: CCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATC...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACCAGCCTCAGAGTTATTaGGCCATTATCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNQPQSY*AIIWAG
Trigger: TCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTG...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTACGAGGCTAAGCTCTaGTGTGTCCAGCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGYEAKL*CVQLDG
Trigger: ACCGTCCAGCTGGACACAGCAGAGCTTAGCCTCGTA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAAGTGAGCCGAGATCGTaGCACCGCACTCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKSEPRS*HRTPPC
Trigger: GCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCTTCTGCCTGCATTCTTaGCATCCAACTCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSFCLHS*HPTHWP
Trigger: AGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTATCCAGCAGCTTCTaGCTGCATTCTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTLSSSF*LHSCHP
Trigger: TGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAA...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCAGCCTCAAACTCCTGTaGTCAAGTGAGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFISLKLL*SSEPPT
Trigger: CGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCT...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATACAGTTTGGAAGACTTaGTGGCCCAGAAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNTVWKT*WPRKSH
Trigger: GTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGAGTTTACAAACTCTTGTaGAACATGCCACTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KTPALYTALSSQGLRTDRVYKLL*NMPLLP
Trigger: AGGGAGGAGTGGCATGTTGCACAAGAGTTTGTAAAC...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCGTAGAGTTCACCATCTaGGGACACTTCTTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIVEFTI*GHFFQR
Trigger: ACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTAC...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGAACCAAAGGGCAGTTaGAATACGAGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWEPKGS*NTRLSS
Trigger: AGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTC...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCCGCAGAATCGAAGCCTaGACAGGCCCTGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGRRIEA*TGPGNF
Trigger: GAAGTTGCCAGGGCCTGTCCAGGCTTCGATTCTGCG...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCCGCAGAATCGAAGCCTaGACAGGCCCTGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIRRIEA*TGPGNF
Trigger: GAAGTTGCCAGGGCCTGTCCAGGCTTCGATTCTGCG...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCCTGGTGTTGTGGAACTaGAACCTGATCGCCACGCCT +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFILVLWN*NLIATP
Trigger: AGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAG...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGAGAGGGGGAAGGCTTaGGTCAGGCTGACAAAACTG +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIERGKA*VRLTKL
Trigger: CAGTTTTGTCAGCCTGACCCAAGCCTTCCCCCTCTC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAACACAAGATCACATCATaGTTGCTGATGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKHKITS*LLMVRG
Trigger: CCCTCTCACCATCAGCAACCATGATGTGATCTTGTG...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCACGGCACTTCTCACTaGTATCCCAGTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGHGTSH*YPSRQS
Trigger: GCTCTGACGACTGGGATACCAGTGAGAAGTGCCGTG...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCAACAGAACTCTCGCTTaGACAGGGACACAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSNRTLA*TGTQKE
Trigger: TTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTT...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTAACAGAACTCTCGCTTaGACAGGGACACAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTNRTLA*TGTQKE
Trigger: TTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTT...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAGCCTCTGCTGGGGTTaGCATTCAGCCACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKSLCWG*HSATAY
Trigger: GTAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGGAGGAAGCCTCTGCTaGGGTTGGCATTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGGGSLC*GWHSAT
Trigger: AGTGGCTGAATGCCAACCCCAGCAGAGGCTTCCTCC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTATCTCCAGTCCATACTaGCATCAGAGTCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTISSPY*HQSQLT
Trigger: AGTGAGCTGACTCTGATGCCAGTATGGACTGGAGAT...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATTCATCCAGAGCTCTTTaGGGATTTCCATGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNSSRAL*GFPWGY
Trigger: ATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGA...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGAACAGATCTTCCTGCTaGACAGCATTTCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWNRSSC*TAFRYR
Trigger: CCTGTACCGAAATGCTGTCCAGCAGGAAGATCTGTT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGTGGAAGACATTTTTGTaGAATATGGGGAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLWKTFL*NMGRVE
Trigger: TTCTACTCTCCCCATATTCCACAAAAATGTCTTCCA...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGGAGAGAGGCTCAGAGTaGGTTGCAGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGERGSE*VAEELV
Trigger: CACCAGTTCCTCTGCAACCCACTCTGAGCCTCTCTC...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCGAGAGAGGCTCAGAGTaGGTTGCAGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFERGSE*VAEELV
Trigger: CACCAGTTCCTCTGCAACCCACTCTGAGCCTCTCTC...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACAGCCTCCCAAGTAACTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHSLPSN*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCT...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATCAGGCTCTTCATTGCTaGCAAATGACTGTCACAAAT +
Preference number: 4 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDQALHC*QMTVTN
Trigger: ATTTGTGACAGTCATTTGCCAGCAATGAAGAGCCTG...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGCTATGTTGCCTAGGCTaGAGTGCAGCAACTAATTCA +
Preference number: 4 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLLCCLG*SAATNS
Trigger: TGAATTAGTTGCTGCACTCCAGCCTAGGCAACATAG...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAACTGGACGGTCACATCTaGGCCAAGGATGTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQLDGHI*AKDVEF
Trigger: GAACTCTACATCCTTGGCTCAGATGTGACCGTCCAG...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR TCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCCTTTCTGGTTTATCTTaGCCCCTGGAGCTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPLSGLS*PLELWS
Trigger: GGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAG...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACCCTCTGACACAGCTTTaGACCACTCTTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHPLTQL*TTLPPL
Trigger: CAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGG...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACAGGCTTGGGTCAGGCTaGCAAAACTGCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHRLGSG*QNCIRE
Trigger: TTCTCGAATGCAGTTTTGTCAGCCTGACCCAAGCCT...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTGTCAAACACTGAGCTaGCAGGCTTGTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGCQTLS*QACGHW
Trigger: CCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAATGTCAAACACTGAGCTaGCAGGCTTGTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPECQTLS*QACGHW
Trigger: CCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACA...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGGCAGGAGAATTGCTTaGACCAAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSGRRIA*TKEAEV
Trigger: AACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCC...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGGGCAGGAGAATTGCTTaGACCAAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGGRRIA*TKEAEV
Trigger: AACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCC...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGATCTCAGCCCAGACTaGCTATGCCCTGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQDLSPD*LCPGGR
Trigger: CCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATC...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAACTCCTGGTCTCAAGTaGTGCTCCCACCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQITPGLK*CSHLSL
Trigger: GAGACTGAGGTGGGAGCATCACTTGAGACCAGGAGT...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAACTCCTGTGCTCAAGTaGGCCACCCACGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKTPVLK*ATHVSL
Trigger: GAGGCTGACGTGGGTGGCTCACTTGAGCACAGGAGT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTACCCAAATTTCAGCCCTaGGCCTCCCATCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLPKFQP*ASHLQT
Trigger: CGTTTGGAGATGGGAGGCTCAGGGCTGAAATTTGGG...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCCAGCGTCTCCTGGATTaGCACAGACTGGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRQRLLD*HRLVHA
Trigger: AGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTG...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCCAGCGTCTCCTGGATTaGCACAGACTGGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLQRLLD*HRLVHA
Trigger: AGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTG...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGCAGCGTCTCCTGGATTaGCACAGACTGGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVQRLLD*HRLVHA
Trigger: AGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTG...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR GCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTATACGAGGCTAAGCTCTaGTGTGTCCAGCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLYEAKL*CVQLDG
Trigger: ACCGTCCAGCTGGACACAGCAGAGCTTAGCCTCGTA...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTACGAGGCTAAGCTCTaGTGTGTCCAGCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRYEAKL*CVQLDG
Trigger: ACCGTCCAGCTGGACACAGCAGAGCTTAGCCTCGTA...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCTACGAGGCTAAGCTCTaGTGTGTCCAGCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGYEAKL*CVQLDG
Trigger: ACCGTCCAGCTGGACACAGCAGAGCTTAGCCTCGTA...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGCGGCTACAGAATGATTaGTGGCAGAGAGGTTATCAA +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWRLQND*WQRGYQ
Trigger: TTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCG...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCGGCAGGATAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFGRIIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTGCAAGCAATTATCCTGCC...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGGCAGGATAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKGRIIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTGCAAGCAATTATCCTGCC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAGTGGCAGTGTGTGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKVAVCA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTGCAGGCACACACTGCCAC...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCTTCTGCCTGCATTCTTaGCATCCAACTCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIFCLHS*HPTHWP
Trigger: AGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTTCTGCCTGCATTCTTaGCATCCAACTCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNFCLHS*HPTHWP
Trigger: AGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTCCAGCAGCTTCTGCCTaGATTCTTGCCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSPAASA*ILAIQL
Trigger: GAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGG...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAACTCAGTCTCCCAAAGTaGCGAGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQLSLPK*RDYRRE
Trigger: CTCACGCCTGTAATCTCGGCACTTTGGGAGACTGAG...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCAGCCTCAAACTCCTGTaGTCAAGTGAGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNISLKLL*SSEPPT
Trigger: CGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCT...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCACAGTTTGGAAGACTTaGTGGCCCAGAAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHITVWKT*WPRKSH
Trigger: GTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGT...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTATCCAGCCCTGTACACTaGGCTATCATCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLSSPVH*AIITGA
Trigger: AGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGA...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTATCTCCCAGGCTGGAATaGAATGGCACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLSPRLE*NGTISA
Trigger: AGCCGAGATCGTGCCATTGCATTCCAGCCTGGGAGA...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGAGGGATTATAGCCATGTaGCACTACACCCATCTAATT +
Preference number: 4 (lower is better)
Translates to: KTPALYTALSSQGLRTDRGIIAM*HYTHLI
Trigger: AATTAGATGGGTGTAGTGGCACATGGCTATAATCCC...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGTCAGCCAGCGTCTCCTaGATTGCCACAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLESASVS*IATDWS
Trigger: GGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGA...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGAGACTGGCACTATCTaGTCCAGAGAGACATCGTCC +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSETGTI*SRETSS
Trigger: GGACGATGTCTCTCTGGACCAGATAGTGCCAGTCTC...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGAGACTGGCACTATCTaGTCCAGAGAGACATCGTCC +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIETGTI*SRETSS
Trigger: GGACGATGTCTCTCTGGACCAGATAGTGCCAGTCTC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCAAAATCCCGCGAGACTaGCACTATCTGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPKIPRD*HYLVQR
Trigger: TCTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTCTGCTGTGTCCAGCTaGACGGTCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRSAVSS*TVTSEP
Trigger: TGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGA...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAGCCCTGGCAACTTCGTaGAGGAACATCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQALATS*RNILVC
Trigger: ACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGC...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAGCCCTGGCAACTTCGTaGAGGAACATCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEALATS*RNILVC
Trigger: ACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGC...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGTGGTTGCAAGCTTTCTaGTTTATCTTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWWLQAF*FILTPG
Trigger: TCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCA...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCTGGTTGCAAGCTTTCTaGTTTATCTTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSWLQAF*FILTPG
Trigger: TCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCA...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGCCGGAGGCATTCTTTaGGGGACTGCCCATTTACAT +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVAGGIL*GTAHLH
Trigger: ATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGGCCGGAGGCATTCTTTaGGGGACTGCCCATTTACAT +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGAGGIL*GTAHLH
Trigger: ATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGC...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCAGATGCTGGTGTTGTaGAACTGGAACCTGATCGCC +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGQMLVL*NWNLIA
Trigger: GGCGATCAGGTTCCAGTTCCACAACACCAGCATCTG...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAACAGATGCTGGTGTTGTaGAACTGGAACCTGATCGCC +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEQMLVL*NWNLIA
Trigger: GGCGATCAGGTTCCAGTTCCACAACACCAGCATCTG...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGAGAGGGGGAAGGCTTaGGTCAGGCTGACAAAACTG +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIERGKA*VRLTKL
Trigger: CAGTTTTGTCAGCCTGACCCAAGCCTTCCCCCTCTC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACCACAAGATCACATCATaGTTGCTGATGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNHKITS*LLMVRG
Trigger: CCCTCTCACCATCAGCAACCATGATGTGATCTTGTG...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCCACGGCACTTCTCACTaGTATCCCAGTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGHGTSH*YPSRQS
Trigger: GCTCTGACGACTGGGATACCAGTGAGAAGTGCCGTG...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCGAGCTGACAGGCTTGTaGTCACTGGTCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAELTGL*SLVFRA
Trigger: GGCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTC...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCAGCCTCTGCTGGGGTTaGCATTCAGCCACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLSLCWG*HSATAY
Trigger: GTAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCT...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCAGCCTCTGCTGGGGTTaGCATTCAGCCACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNISLCWG*HSATAY
Trigger: GTAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCT...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGGAGGAAGCCTCTGCTaGGGTTGGCATTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEGGSLC*GWHSAT
Trigger: AGTGGCTGAATGCCAACCCCAGCAGAGGCTTCCTCC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACCTCAACATCAGAATCTaGCAGGAGGAAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHLNIRI*QEEASA
Trigger: AGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAG...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAAACACAGTGTATGAATaGGAGACCCAAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKNTVYE*ETQNSW
Trigger: CCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTCTTTGGGGATTTCCATaGGGCTATCCAACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSLWGFP*GYPTGS
Trigger: GGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAG...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTACTTTGGGGATTTCCATaGGGCTATCCAACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVLWGFP*GYPTGS
Trigger: GGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAG...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACAACAGATCTTCCTGCTaGACAGCATTTCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNNRSSC*TAFRYR
Trigger: CCTGTACCGAAATGCTGTCCAGCAGGAAGATCTGTT...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGCTGTGTTGCCCAGCCTaGTCCCAAACTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQLCCPA*SQTPGL
Trigger: GAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAG...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCAGCCTCCCAAGTAACTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFISLPSN*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCT...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCTCTCTCACCCGGGCTaGCGTACAGTGATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLALSHPG*RTVMWS
Trigger: TGACCACATCACTGTACGCCAGCCCGGGTGAGAGAG...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGCTCTCTCACCCGGGCTaGCGTACAGTGATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQLSHPG*RTVMWS
Trigger: TGACCACATCACTGTACGCCAGCCCGGGTGAGAGAG...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGCATCATATACAGTTTaGAAGACTTGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGASYTV*KTCWPR
Trigger: TCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
3UTR CAA 72 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTaGCATATGCATATACACATCCTCAGACAGAGCACT +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSS*HMHIHILRQST
Trigger: AGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCCTTTCTGGTTTATCTTaGCCCCTGGAGCTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFILSGLS*PLELWS
Trigger: GGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAG...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTACCTCTGACACAGCTTTaGACCACTCTTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVPLTQL*TTLPPL
Trigger: CAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGG...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTCCTCTGACACAGCTTTaGACCACTCTTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSPLTQL*TTLPPL
Trigger: CAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGG...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTATGGATGAAGACCCTCTaGCACAGCTTTGAACCACTC +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVWMKTL*HSFEPL
Trigger: GAGTGGTTCAAAGCTGTGTCAGAGGGTCTTCATCCA...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCTATTTGGCATCTGGATaGAGACCCTCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPYLASG*RPSDTA
Trigger: AGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAATA...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCAGGCTTGGGTCAGGCTaGCAAAACTGCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIRLGSG*QNCIRE
Trigger: TTCTCGAATGCAGTTTTGTCAGCCTGACCCAAGCCT...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGCTTCTATCCTGTAGTTaGGGTCCCCCAGCCACAAGA +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVLLSCS*GPPATR
Trigger: TCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAG...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATACTTCTATCCTGTAGTTaGGGTCCCCCAGCCACAAGA +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQILLSCS*GPPATR
Trigger: TCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAG...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGCCCGATGTCAAACACTaGGCTGACAGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQPDVKH*ADRLVV
Trigger: GACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGG...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGCTCAGGCCTGGTTGCTaGAACAGATCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQLRPGC*NRSSCW
Trigger: CCAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAG...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR TCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTCAGGCCTGGTTGCTaGAACAGATCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLELRPGC*NRSSCW
Trigger: CCAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAG...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR TCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTTATCCAAGCAGTCCCTaGTATGTTCAAATTCTGACC +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGYPSSP*YVQILT
Trigger: GGTCAGAATTTGAACATATCAGGGACTGCTTGGATA...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR TCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAGCTTCGGCTACAGAATaGTTGCTGGCAGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEASATE*LLAERL
Trigger: TAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGC...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR TCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGGCAGGAGAATTGCTTaGACCAAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGGRRIA*TKEAEV
Trigger: AACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCGCCCTGGAGGTAGGGTaGGTGAGTACAAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRALEVG*VSTSTV
Trigger: AACTGTACTTGTACTCACTCACCCTACCTCCAGGGC...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCCCTGGAGGTAGGGTaGGTGAGTACAAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVALEVG*VSTSTV
Trigger: AACTGTACTTGTACTCACTCACCCTACCTCCAGGGC...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGCCCTGGAGGTAGGGTaGGTGAGTACAAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIALEVG*VSTSTV
Trigger: AACTGTACTTGTACTCACTCACCCTACCTCCAGGGC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTT +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPSTESI*GGCSLF
Trigger: AAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAACAGCCTCAGAGTTATTaGGCCATTATCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKQPQSY*AIIWAG
Trigger: TCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTG...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAACAGCCTCAGAGTTATTaGGCCATTATCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEQPQSY*AIIWAG
Trigger: TCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTG...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTAAGAAGACTAAGGGAATaGAGTGCCTGCATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLRRLRE*SACMAW
Trigger: CCAGGCCATGCAGGCACTTCATTCCCTTAGTCTTCT...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAAGTTAGAACCACCTaGAGTGTTGCGCTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEKVRTT*SVALPR
Trigger: TCTCGGGAGCGCAACACTGCAGGTGGTTCTAACTTT...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373027.5
CDS-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCAAAGTTAGAACCACCTaGAGTGTTGCGCTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIKVRTT*SVALPR
Trigger: TCTCGGGAGCGCAACACTGCAGGTGGTTCTAACTTT...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373027.5
CDS-3UTR GCA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACCTCTTCAATGTGGGCTaGCAAGTGAGAATTCACAAC +
Preference number: 4 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNLFNVG*QVRIHN
Trigger: GTTGTGAATTCTCACTTGGCAGCCCACATTGAAGAG...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCAAAGACAGTCTTTaGGGCCACCTGAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTFKDSL*GHLNFQ
Trigger: CTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAA...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGTTCAAAGACAGTCTTTaGGGCCACCTGAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWFKDSL*GHLNFQ
Trigger: CTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAA...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAATTCAAAGACAGTCTTTaGGGCCACCTGAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKFKDSL*GHLNFQ
Trigger: CTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAA...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATAATGACCTGTTTGCTTaGTGTGTAGTTGCCAGAACA +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNNDLFA*CVVART
Trigger: TGTTCTGGCAACTACACAGCAAGCAAACAGGTCATT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGAACGGGGGTCGAGTTTaGATATGCATATACACATCC +
Preference number: 4 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMNGGRV*ICIYTS
Trigger: GGATGTGTATATGCATATGCAAACTCGACCCCCGTT...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCCTCAGTCTCCCAAAGTaGCGAGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGLSLPK*RDYRRE
Trigger: CTCACGCCTGTAATCTCGGCACTTTGGGAGACTGAG...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACACAGTTTGGAAGACTTaGTGGCCCAGAAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHTVWKT*WPRKSH
Trigger: GTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGT...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTAGCACCAGGGGCCCTTaGAGAAAACCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTETVTIIPHQHMASLCFSTRGP*RKPWSW
Trigger: CCAGCTCCAGGGTTTTCTGCAAGGGCCCCTGGTGCT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTTCAGCCAGCGTCTCCTaGATTGCCACAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVISASVS*IATDWS
Trigger: GGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGA...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAATCAGCCAGCGTCTCCTaGATTGCCACAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKSASVS*IATDWS
Trigger: GGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGA...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGTCTGCTGTGTCCAGCTaGACGGTCACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLESAVSS*TVTSEP
Trigger: TGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGA...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGAGCCTGGACAGGCCCTaGCAACTTCGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQSLDRP*QLRGGT
Trigger: TGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGCT...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTCGCAGAATCGAAGCCTaGACAGGCCCTGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVIRRIEA*TGPGNF
Trigger: GAAGTTGCCAGGGCCTGTCCAGGCTTCGATTCTGCG...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCTGGTTGCAAGCTTTCTaGTTTATCTTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIWLQAF*FILTPG
Trigger: TCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCA...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGGTGTTGTGGAACTaGAACCTGATCGCCACGCCT +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLELVLWN*NLIATP
Trigger: AGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAG...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCCAGATGCTGGTGTTGTaGAACTGGAACCTGATCGCC +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRQMLVL*NWNLIA
Trigger: GGCGATCAGGTTCCAGTTCCACAACACCAGCATCTG...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAATCACAACGCAGATGCTaGTGTTGTGGAACTGGAACC +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPESQRRC*CCGTGT
Trigger: GGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGA...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTCACAACGCAGATGCTaGTGTTGTGGAACTGGAACC +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGSQRRC*CCGTGT
Trigger: GGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTTCACAACGCAGATGCTaGTGTTGTGGAACTGGAACC +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSSQRRC*CCGTGT
Trigger: GGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGA...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGAGAGGGGGAAGGCTTaGGTCAGGCTGACAAAACTG +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEERGKA*VRLTKL
Trigger: CAGTTTTGTCAGCCTGACCCAAGCCTTCCCCCTCTC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAGAGCTGACAGGCTTGTaGTCACTGGTCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKELTGL*SLVFRA
Trigger: GGCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTC...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCCTCAACATCAGAATCTaGCAGGAGGAAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFLNIRI*QEEASA
Trigger: AGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAG...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTACTCAACATCAGAATCTaGCAGGAGGAAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVLNIRI*QEEASA
Trigger: AGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAG...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCATGGGGCTATCCAACTaGCTCCCATCATCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGMGLSN*LPSSPV
Trigger: GACTGGAGATGATGGGAGCCAGTTGGATAGCCCCAT...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCCTTTGGGGATTTCCATaGGGCTATCCAACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSLWGFP*GYPTGS
Trigger: GGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAG...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCACAGATGACAGGCTCTaGAAGGCTCTCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFTDDRL*KALQEK
Trigger: CTTTTCCTGGAGAGCCTTCCAGAGCCTGTCATCTGT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGAGAGAGGCTCAGAGTaGGTTGCAGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQERGSE*VAEELV
Trigger: CACCAGTTCCTCTGCAACCCACTCTGAGCCTCTCTC...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACTGTGTTGCCCAGCCTaGTCCCAAACTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKLCCPA*SQTPGL
Trigger: GAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAG...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCTGTGTTGCCCAGCCTaGTCCCAAACTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQLCCPA*SQTPGL
Trigger: GAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAG...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAAGCCTCCCAAGTAACTaGGACCACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQISLPSN*DHRHAS
Trigger: TGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCT...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAGAACATCCTGGTTTGTaGACCAAAGGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEEHPGL*TKGQLE
Trigger: TTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTC...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR TCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCCTTTCTGGTTTATCTTaGCCCCTGGAGCTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGLSGLS*PLELWS
Trigger: GGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAG...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCCCTCTGACACAGCTTTaGACCACTCTTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGPLTQL*TTLPPL
Trigger: CAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGG...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTATATTTGGCATCTGGATaGAGACCCTCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVYLASG*RPSDTA
Trigger: AGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAATA...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCCTCGGCTTCCACTTCTaGGATATAAGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRLGFHF*DISCML
Trigger: GAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAG...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCAGGCTTGGGTCAGGCTaGCAAAACTGCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIRLGSG*QNCIRE
Trigger: TTCTCGAATGCAGTTTTGTCAGCCTGACCCAAGCCT...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTTCTATCCTGTAGTTaGGGTCCCCCAGCCACAAGA +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLELLSCS*GPPATR
Trigger: TCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAG...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGCTTCTATCCTGTAGTTaGGGTCCCCCAGCCACAAGA +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQLLSCS*GPPATR
Trigger: TCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAG...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGTATGCATACAGCATTTaGAAGTCCTTCTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWYAYSI*KSFSSM
Trigger: CATCGAAGAGAAGGACTTTCAAATGCTGTATGCATA...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTATGCATACAGCATTTaGAAGTCCTTCTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTYAYSI*KSFSSM
Trigger: CATCGAAGAGAAGGACTTTCAAATGCTGTATGCATA...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGGTAACTCAGCTGAGTaGTGTTCTTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVGNSAE*CSSLSR
Trigger: TCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCGGTAACTCAGCTGAGTaGTGTTCTTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFGNSAE*CSSLSR
Trigger: TCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACC...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGTGTCAAACACTGAGCTaGCAGGCTTGTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLECQTLS*QACGHW
Trigger: CCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACA...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCCCGATGTCAAACACTaGGCTGACAGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQPDVKH*ADRLVV
Trigger: GACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGG...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTCCCGATGTCAAACACTaGGCTGACAGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVIPDVKH*ADRLVV
Trigger: GACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGG...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCGATATGTTCAAATTCTaGCCTCAGGCCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFDMFKF*PQAWLL
Trigger: CAGCAACCAGGCCTGAGGTCAGAATTTGAACATATC...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR TCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCGCTTCGGCTACAGAATaGTTGCTGGCAGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSASATE*LLAERL
Trigger: TAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGC...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR TCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATATCAAGCTTTTGGTaGCCAGCTGGGTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEISSFW*PAGFRS
Trigger: GCTTCGAAACCCAGCTGGTCACCAAAAGCTTGATAT...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATACAGCCTCAGAGTTATTaGGCCATTATCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIQPQSY*AIIWAG
Trigger: TCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTG...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTAAGGAAATGAAAGATTaGGATCCCTGCACATTTCTC +
Preference number: 4 (lower is better)
Translates to: KPKEDANYQHHQALRSHLKEMKD*DPCTFL
Trigger: GAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTT...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGATAAGCTTCACCTTTaGATATTTGGCATCTGGATG +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGDKLHL*IFGIWM
Trigger: CATCCAGATGCCAAATATGCAAAGGTGAAGCTTATC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACCTCTTCAATGTGGGCTaGCAAGTGAGAATTCACAAC +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHLFNVG*QVRIHN
Trigger: GTTGTGAATTCTCACTTGGCAGCCCACATTGAAGAG...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCAATGACCTGTTTGCTTaGTGTGTAGTTGCCAGAACA +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHINDLFA*CVVART
Trigger: TGTTCTGGCAACTACACAGCAAGCAAACAGGTCATT...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR GCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGGCTCAGGAAATAGCTaGCATTCTTGCTACCAAGTG +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVGSGNS*HSCYQV
Trigger: CACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAGGCTCAGGAAATAGCTaGCATTCTTGCTACCAAGTG +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEGSGNS*HSCYQV
Trigger: CACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCC...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAAGCCTCAAACTCCTGTaGTCAAGTGAGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKSLKLL*SSEPPT
Trigger: CGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCGTGGTCATAGGTCACTaGAGCCTCAAACTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAVVIGH*SLKLLC
Trigger: GCACAGGAGTTTGAGGCTGCAGTGACCTATGACCAC...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCGAGACTGGCACTATCTaGTCCAGAGAGACATCGTCC +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAETGTI*SRETSS
Trigger: GGACGATGTCTCTCTGGACCAGATAGTGCCAGTCTC...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGAACCAAAGGGCAGTTaGAATACGAGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKEPKGS*NTRLSS
Trigger: AGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGAACCAAAGGGCAGTTaGAATACGAGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVEPKGS*NTRLSS
Trigger: AGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGAACCAAAGGGCAGTTaGAATACGAGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIEPKGS*NTRLSS
Trigger: AGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATACGTGGAGGAACATCCTaGTTTGTGAACCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIRGGTS*FVNQRA
Trigger: TGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACG...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGCCCTGGCAACTTCGTaGAGGAACATCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEALATS*RNILVC
Trigger: ACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGCCGGAGGCATTCTTTaGGGGACTGCCCATTTACAT +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEAGGIL*GTAHLH
Trigger: ATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCTCACAACGCAGATGCTaGTGTTGTGGAACTGGAACC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGSQRRC*CCGTGT
Trigger: GGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGA...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCCACAAGATCACATCATaGTTGCTGATGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIHKITS*LLMVRG
Trigger: CCCTCTCACCATCAGCAACCATGATGTGATCTTGTG...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTCACGGCACTTCTCACTaGTATCCCAGTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVIHGTSH*YPSRQS
Trigger: GCTCTGACGACTGGGATACCAGTGAGAAGTGCCGTG...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCACGGCACTTCTCACTaGTATCCCAGTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQHGTSH*YPSRQS
Trigger: GCTCTGACGACTGGGATACCAGTGAGAAGTGCCGTG...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTAGCCTCTGCTGGGGTTaGCATTCAGCCACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVISLCWG*HSATAY
Trigger: GTAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCCTCAACATCAGAATCTaGCAGGAGGAAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLLNIRI*QEEASA
Trigger: AGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAG...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCAACACAGTGTATGAATaGGAGACCCAAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPNTVYE*ETQNSW
Trigger: CCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATCTCCAGTCCATACTaGCATCAGAGTCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEISSPY*HQSQLT
Trigger: AGTGAGCTGACTCTGATGCCAGTATGGACTGGAGAT...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGATGGGGCTATCCAACTaGCTCCCATCATCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEMGLSN*LPSSPV
Trigger: GACTGGAGATGATGGGAGCCAGTTGGATAGCCCCAT...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAACAGATCTTCCTGCTaGACAGCATTTCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFNRSSC*TAFRYR
Trigger: CCTGTACCGAAATGCTGTCCAGCAGGAAGATCTGTT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAACAGATCTTCCTGCTaGACAGCATTTCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPENRSSC*TAFRYR
Trigger: CCTGTACCGAAATGCTGTCCAGCAGGAAGATCTGTT...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCACAGATGACAGGCTCTaGAAGGCTCTCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNITDDRL*KALQEK
Trigger: CTTTTCCTGGAGAGCCTTCCAGAGCCTGTCATCTGT...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGACAGATGACAGGCTCTaGAAGGCTCTCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVTDDRL*KALQEK
Trigger: CTTTTCCTGGAGAGCCTTCCAGAGCCTGTCATCTGT...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAGAGAGAGGCTCAGAGTaGGTTGCAGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKERGSE*VAEELV
Trigger: CACCAGTTCCTCTGCAACCCACTCTGAGCCTCTCTC...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCAAAATTAGCTGGGCGTaGCAGTGTGTGCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAKISWA*QCVPAV
Trigger: GACTGCAGGCACACACTGCCACGCCCAGCTAATTTT...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTGCAATGAAGGAGAAAATGAGTCACCACGCCTaGCTGACAAAATTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QHHQALRSHLVMAAMKEKMSHHA*LTKFLK
Trigger: TTTTAAAAATTTTGTCAGCCAGGCGTGGTGACTCAT...TTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTAGAACATCCTGGTTTGTaGACCAAAGGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLEHPGL*TKGQLE
Trigger: TTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTC...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGAACATCCTGGTTTGTaGACCAAAGGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIEHPGL*TKGQLE
Trigger: TTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGTGGATGAAGACCCTCTaGCACAGCTTTGAACCACTC +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEWMKTL*HSFEPL
Trigger: GAGTGGTTCAAAGCTGTGTCAGAGGGTCTTCATCCA...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTATTTGGCATCTGGATaGAGACCCTCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSYLASG*RPSDTA
Trigger: AGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAATA...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCTCGGCTTCCACTTCTaGGATATAAGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLALGFHF*DISCML
Trigger: GAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAG...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTCGGCTTCCACTTCTaGGATATAAGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLELGFHF*DISCML
Trigger: GAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAG...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCATGTGGGCTGCCAAGTaGGAATTCACAACGCAGATG +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAMWAAK*EFTTQM
Trigger: CATCTGCGTTGTGAATTCTCACTTGGCAGCCCACAT...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCTTCTATCCTGTAGTTaGGGTCCCCCAGCCACAAGA +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQLLSCS*GPPATR
Trigger: TCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAG...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCGGTAACTCAGCTGAGTaGTGTTCTTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSGNSAE*CSSLSR
Trigger: TCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACC...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCGGTAACTCAGCTGAGTaGTGTTCTTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIGNSAE*CSSLSR
Trigger: TCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACC...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGTGTCAAACACTGAGCTaGCAGGCTTGTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQCQTLS*QACGHW
Trigger: CCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACA...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCATGTACTTCACATTCTaGAAACAGAACTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIMYFTF*KQNSRL
Trigger: CAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACAT...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCATATCAAGCTTTTGGTaGCCAGCTGGGTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSISSFW*PAGFRS
Trigger: GCTTCGAAACCCAGCTGGTCACCAAAAGCTTGATAT...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCTTTCCATCAAATATCTaGTCATGGGGATCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIFPSNI*SWGSQP
Trigger: GGGCTGAGATCCCCATGATCAGATATTTGATGGAAA...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTT +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSSTESI*GGCSLF
Trigger: AAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCT...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTT +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNISTESI*GGCSLF
Trigger: AAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCT...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTACAGGGGCTGAGAACTaGCAGAGCCCCAACACATAC +
Preference number: 4 (lower is better)
Translates to: KTETVTIIPHQHMASLCFTGAEN*QSPNTY
Trigger: GTATGTGTTGGGGCTCTGTCAGTTCTCAGCCCCTGT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTCTCTTCAATGTGGGCTaGCAAGTGAGAATTCACAAC +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSLFNVG*QVRIHN
Trigger: GTTGTGAATTCTCACTTGGCAGCCCACATTGAAGAG...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCCTCTTCAATGTGGGCTaGCAAGTGAGAATTCACAAC +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFILFNVG*QVRIHN
Trigger: GTTGTGAATTCTCACTTGGCAGCCCACATTGAAGAG...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCGGCTACAGAATGATTaGTGGCAGAGAGGTTATCAA +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGRLQND*WQRGYQ
Trigger: TTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCG...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGGCTCAGGAAATAGCTaGCATTCTTGCTACCAAGTG +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVGSGNS*HSCYQV
Trigger: CACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCC...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACCAGCAGCTTCTGCCTaGATTCTTGCCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKPAASA*ILAIQL
Trigger: GAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGG...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCTTATCCAGCAGCTTCTaGCTGCATTCTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLLSSSF*LHSCHP
Trigger: TGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAA...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCTGATCATGGGGATCTCACAGTTTGGAAGACTTaGTGGCCCAGAAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PTHWPFRTFHQISDHGDLTVWKT*WPRKSH
Trigger: GTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGT...GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGTAGAGTTCACCATCTaGGGACACTTCTTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEVEFTI*GHFFQR
Trigger: ACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTAC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCGTGGAGGAACATCCTaGTTTGTGAACCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLERGGTS*FVNQRA
Trigger: TGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACG...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAGCCCTGGCAACTTCGTaGAGGAACATCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKALATS*RNILVC
Trigger: ACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGC...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAGGATTTATTCTGTCTTaGTTGCAAGCTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKGFILS*LQAFWF
Trigger: AAACCAGAAAGCTTGCAACCAAGACAGAATAAATCC...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGGATTTATTCTGTCTTaGTTGCAAGCTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGGFILS*LQAFWF
Trigger: AAACCAGAAAGCTTGCAACCAAGACAGAATAAATCC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGTCCAAACTTCTGCATaGATAAAATATGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWVQTSA*IKYEPC
Trigger: ACAAGGCTCATATTTTATCCATGCAGAAGTTTGGAC...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCGTCCAAACTTCTGCATaGATAAAATATGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSVQTSA*IKYEPC
Trigger: ACAAGGCTCATATTTTATCCATGCAGAAGTTTGGAC...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTTACACAATAGACATCTaGGGCCTGGATACCATTGCT +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSYTIDI*GLDTIA
Trigger: AGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTA...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAATACACAATAGACATCTaGGGCCTGGATACCATTGCT +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEYTIDI*GLDTIA
Trigger: AGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTA...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGATGCTGGTGTTGTaGAACTGGAACCTGATCGCC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKQMLVL*NWNLIA
Trigger: GGCGATCAGGTTCCAGTTCCACAACACCAGCATCTG...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTAACACAGTGTATGAATaGGAGACCCAAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSNTVYE*ETQNSW
Trigger: CCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTT...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAAACACAGTGTATGAATaGGAGACCCAAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKNTVYE*ETQNSW
Trigger: CCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAATCTCCAGTCCATACTaGCATCAGAGTCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIISSPY*HQSQLT
Trigger: AGTGAGCTGACTCTGATGCCAGTATGGACTGGAGAT...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCATCTCCAGTCCATACTaGCATCAGAGTCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSISSPY*HQSQLT
Trigger: AGTGAGCTGACTCTGATGCCAGTATGGACTGGAGAT...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTCTTTGGGGATTTCCATaGGGCTATCCAACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVILWGFP*GYPTGS
Trigger: GGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAG...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCATCCAGAGCTCTTTaGGGATTTCCATGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQISSRAL*GFPWGY
Trigger: ATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGA...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCTCATCCAGAGCTCTTTaGGGATTTCCATGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGSSRAL*GFPWGY
Trigger: ATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGA...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCTGGAAGACATTTTTGTaGAATATGGGGAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: AASACILAIQLIGLSGLSWKTFL*NMGRVE
Trigger: TTCTACTCTCCCCATATTCCACAAAAATGTCTTCCA...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAATGGTGGGCTTAATTaGGGTACTAGGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFNGGLN*GTRLRK
Trigger: TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAAATGGTGGGCTTAATTaGGGTACTAGGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQNGGLN*GTRLRK
Trigger: TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATT...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAAATGGTGGGCTTAATTaGGGTACTAGGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVNGGLN*GTRLRK
Trigger: TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATT...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATTCAGTTTTATTATGGTaGATTTTCTCCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNSVLLW*IFSRVF
Trigger: GAAGACACGGGAGAAAATCCACCATAATAAAACTGA...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTTGCCATCCAACTCATTaGCCTTTCAGGACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSCHPTH*PFRTFH
Trigger: ATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCA...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTATGCCATCCAACTCATTaGCCTTTCAGGACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVCHPTH*PFRTFH
Trigger: ATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCA...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTGCCATCCAACTCATTaGCCTTTCAGGACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGCHPTH*PFRTFH
Trigger: ATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGCATCATATACAGTTTaGAAGACTTGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKASYTV*KTCWPR
Trigger: TCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGCATCATATACAGTTTaGAAGACTTGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIASYTV*KTCWPR
Trigger: TCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTAAGCTTCCCAAGTACCTaGGATTATAGCCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: LKGNERLRSLHISQSGQLSFPST*DYSHVP
Trigger: TGGCACATGGCTATAATCCCAGGTACTTGGGAAGCT...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
3UTR CAA 72 bp ATGGAGACAGGATGCATCATATACAGTTTGGAAGACTaGCTGGCCCAGAAAATCCCACTTGTTTCACCGAAC +
Preference number: 4 (lower is better)
Translates to: METGCIIYSLED*LAQKIPLVSPN
Trigger: GTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGAACATCCTGGTTTGTaGACCAAAGGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEEHPGL*TKGQLE
Trigger: TTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCGAACATCCTGGTTTGTaGACCAAAGGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAEHPGL*TKGQLE
Trigger: TTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTC...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR TCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTCTCGGCTTCCACTTCTaGGATATAAGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVILGFHF*DISCML
Trigger: GAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAG...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGATGTGGGCTGCCAAGTaGGAATTCACAACGCAGATG +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQMWAAK*EFTTQM
Trigger: CATCTGCGTTGTGAATTCTCACTTGGCAGCCCACAT...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGATATCAAGCTTTTGGTaGCCAGCTGGGTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQISSFW*PAGFRS
Trigger: GCTTCGAAACCCAGCTGGTCACCAAAAGCTTGATAT...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGTTTCCATCAAATATCTaGTCATGGGGATCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVFPSNI*SWGSQP
Trigger: GGGCTGAGATCCCCATGATCAGATATTTGATGGAAA...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCCTCTTCAATGTGGGCTaGCAAGTGAGAATTCACAAC +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRLFNVG*QVRIHN
Trigger: GTTGTGAATTCTCACTTGGCAGCCCACATTGAAGAG...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTATTCAAAGACAGTCTTTaGGGCCACCTGAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVFKDSL*GHLNFQ
Trigger: CTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAA...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCCGGCTACAGAATGATTaGTGGCAGAGAGGTTATCAA +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGRLQND*WQRGYQ
Trigger: TTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCG...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGGCTCAGGAAATAGCTaGCATTCTTGCTACCAAGTG +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQGSGNS*HSCYQV
Trigger: CACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCC...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAGGTCGAGTTTGCATATaGATATACACATCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEGRVCI*IYTSSD
Trigger: GTCTGAGGATGTGTATATGCATATGCAAACTCGACC...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCAACGGGGGTCGAGTTTaGATATGCATATACACATCC +
Preference number: 4 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRNGGRV*ICIYTS
Trigger: GGATGTGTATATGCATATGCAAACTCGACCCCCGTT...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACCACATGGAGACAGGATaGATCATATACAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHHMETG*IIYSLE
Trigger: TTCCAAACTGTATATGATGCATCCTGTCTCCATGTG...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTACTAAGGGAATGAAGTaGCTGCATGGCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KTETVTIIPHQHMASLCFTKGMK*LHGLAL
Trigger: CAGAGCCAGGCCATGCAGGCACTTCATTCCCTTAGT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAAAAATCCCGCGAGACTaGCACTATCTGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKKIPRD*HYLVQR
Trigger: TCTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACGTGGAGGAACATCCTaGTTTGTGAACCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKRGGTS*FVNQRA
Trigger: TGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACG...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCTACACAATAGACATCTaGGGCCTGGATACCATTGCT +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGYTIDI*GLDTIA
Trigger: AGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTA...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCACAAGATCACATCATaGTTGCTGATGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEHKITS*LLMVRG
Trigger: CCCTCTCACCATCAGCAACCATGATGTGATCTTGTG...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCAACAGAACTCTCGCTTaGACAGGGACACAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLANRTLA*TGTQKE
Trigger: TTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTT...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCTCAACATCAGAATCTaGCAGGAGGAAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQLNIRI*QEEASA
Trigger: AGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAG...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCAACACAGTGTATGAATaGGAGACCCAAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNINTVYE*ETQNSW
Trigger: CCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTT...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGTCATCCAGAGCTCTTTaGGGATTTCCATGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQSSRAL*GFPWGY
Trigger: ATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGA...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATATTCTTGCTACCAAGTaGCCTCACATAATTATCTTA +
Preference number: 4 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNILATK*PHIIIL
Trigger: TAAGATAATTATGTGAGGCCACTTGGTAGCAAGAAT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTATTCTTGCTACCAAGTaGCCTCACATAATTATCTTA +
Preference number: 4 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTILATK*PHIIIL
Trigger: TAAGATAATTATGTGAGGCCACTTGGTAGCAAGAAT...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTAATGAAGTGCCTGCATaGCCTGGCTCTGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: KTETVTIIPHQHMASLCFNEVPA*PGSGVL
Trigger: CAGTACACCAGAGCCAGGCCATGCAGGCACTTCATT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR TCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTATGCATACAGCATTTaGAAGTCCTTCTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGYAYSI*KSFSSM
Trigger: CATCGAAGAGAAGGACTTTCAAATGCTGTATGCATA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTATATGCATACAGCATTTaGAAGTCCTTCTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVYAYSI*KSFSSM
Trigger: CATCGAAGAGAAGGACTTTCAAATGCTGTATGCATA...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATGTACTTCACATTCTaGAAACAGAACTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: ASHNYLKASLELKQVGLVMYFTF*KQNSRL
Trigger: CAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACAT...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATGTACTTCACATTCTaGAAACAGAACTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKMYFTF*KQNSRL
Trigger: CAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACAT...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATGTACTTCACATTCTaGAAACAGAACTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQMYFTF*KQNSRL
Trigger: CAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACAT...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGATATGTTCAAATTCTaGCCTCAGGCCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVIDMFKF*PQAWLL
Trigger: CAGCAACCAGGCCTGAGGTCAGAATTTGAACATATC...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR TCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAATATCAAGCTTTTGGTaGCCAGCTGGGTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKISSFW*PAGFRS
Trigger: GCTTCGAAACCCAGCTGGTCACCAAAAGCTTGATAT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCTTTCCATCAAATATCTaGTCATGGGGATCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAFPSNI*SWGSQP
Trigger: GGGCTGAGATCCCCATGATCAGATATTTGATGGAAA...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTAGCACTGAAAGCATCTaGGGTGGCTGTAGCCTATTT +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVISTESI*GGCSLF
Trigger: AAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAGATAAGCTTCACCTTTaGATATTTGGCATCTGGATG +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQDKLHL*IFGIWM
Trigger: CATCCAGATGCCAAATATGCAAAGGTGAAGCTTATC...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGGATAAGCTTCACCTTTaGATATTTGGCATCTGGATG +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGDKLHL*IFGIWM
Trigger: CATCCAGATGCCAAATATGCAAAGGTGAAGCTTATC...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGATAAGCTTCACCTTTaGATATTTGGCATCTGGATG +
Preference number: 4 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSDKLHL*IFGIWM
Trigger: CATCCAGATGCCAAATATGCAAAGGTGAAGCTTATC...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGATAAGCTTCACCTTTaGATATTTGGCATCTGGATG +
Preference number: 4 (lower is better)
Translates to: TSSDRALKASEVAVAYFIDKLHL*IFGIWM
Trigger: CATCCAGATGCCAAATATGCAAAGGTGAAGCTTATC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCTTTCAGCTGATCATATaGATACAGCATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIFQLII*IQHLKV
Trigger: GACTTTCAAATGCTGTATGCATATGATCAGCTGAAA...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCGGCTACAGAATGATTaGTGGCAGAGAGGTTATCAA +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLERLQND*WQRGYQ
Trigger: TTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCG...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAATTCTGCCTGCATTCTTaGCATCCAACTCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKFCLHS*HPTHWP
Trigger: AGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGTTATCCAGCAGCTTCTaGCTGCATTCTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQLSSSF*LHSCHP
Trigger: TGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAA...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAATTATCCAGCAGCTTCTaGCTGCATTCTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKLSSSF*LHSCHP
Trigger: TGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAA...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGGTCGAGTTTGCATATaGATATACACATCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIGRVCI*IYTSSD
Trigger: GTCTGAGGATGTGTATATGCATATGCAAACTCGACC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGGTCGAGTTTGCATATaGATATACACATCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGGRVCI*IYTSSD
Trigger: GTCTGAGGATGTGTATATGCATATGCAAACTCGACC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAACACATGGAGACAGGATaGATCATATACAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKHMETG*IIYSLE
Trigger: TTCCAAACTGTATATGATGCATCCTGTCTCCATGTG...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTAAAATCCCGCGAGACTaGCACTATCTGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KTETVTIIPHQHMASLCFKIPRD*HYLVQR
Trigger: TCTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGTGGTTGCAAGCTTTCTaGTTTATCTTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLEWLQAF*FILTPG
Trigger: TCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCA...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTAACAGAACTCTCGCTTaGACAGGGACACAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVINRTLA*TGTQKE
Trigger: TTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGTATCCAAGCAGTCCCTaGTATGTTCAAATTCTGACC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQYPSSP*YVQILT
Trigger: GGTCAGAATTTGAACATATCAGGGACTGCTTGGATA...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCTTCAAAGACAGTCTTTaGGGCCACCTGAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAFKDSL*GHLNFQ
Trigger: CTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAA...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGAATGACCTGTTTGCTTaGTGTGTAGTTGCCAGAACA +
Preference number: 4 (lower is better)
Translates to: CHSCYQVASHNYLKASLENDLFA*CVVART
Trigger: TGTTCTGGCAACTACACAGCAAGCAAACAGGTCATT...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR GCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTAACGGGGGTCGAGTTTaGATATGCATATACACATCC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVINGGRV*ICIYTS
Trigger: GGATGTGTATATGCATATGCAAACTCGACCCCCGTT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGCACATGGAGACAGGATaGATCATATACAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVHMETG*IIYSLE
Trigger: TTCCAAACTGTATATGATGCATCCTGTCTCCATGTG...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGTGGTTGCAAGCTTTCTaGTTTATCTTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQWLQAF*FILTPG
Trigger: TCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCA...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCGGATTTATTCTGTCTTaGTTGCAAGCTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFGFILS*LQAFWF
Trigger: AAACCAGAAAGCTTGCAACCAAGACAGAATAAATCC...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAATACACAATAGACATCTaGGGCCTGGATACCATTGCT +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKYTIDI*GLDTIA
Trigger: AGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTA...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAAATGGTGGGCTTAATTaGGGTACTAGGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKNGGLN*GTRLRK
Trigger: TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTCAGTTTTATTATGGTaGATTTTCTCCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVASHNYLKASLELKQVGSVLLW*IFSRVF
Trigger: GAAGACACGGGAGAAAATCCACCATAATAAAACTGA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGTCAGTTTTATTATGGTaGATTTTCTCCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VCICIYTSSDRALKASEVSVLLW*IFSRVF
Trigger: GAAGACACGGGAGAAAATCCACCATAATAAAACTGA...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCATGTCAGTTTTATTATaGTGGATTTTCTCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGMSVLL*WIFSRV
Trigger: GACACGGGAGAAAATCCACCATAATAAAACTGACAT...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGTATGCATACAGCATTTaGAAGTCCTTCTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQYAYSI*KSFSSM
Trigger: CATCGAAGAGAAGGACTTTCAAATGCTGTATGCATA...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGATGTACTTCACATTCTaGAAACAGAACTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQMYFTF*KQNSRL
Trigger: CAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACAT...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR TCA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTAGTGATAGTGAACTCTaGGATAAGCCCAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KTETVTIIPHQHMASLCFSDSEL*DKPKED
Trigger: ATCTTCCTTGGGCTTATCTCAGAGTTCACTATCACT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR GCA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCTTTCAGCTGATCATATaGATACAGCATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: HNYLKASLELKQVGLVIGFQLII*IQHLKV
Trigger: GACTTTCAAATGCTGTATGCATATGATCAGCTGAAA...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTTTCAGCTGATCATATaGATACAGCATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: AILATKWPHIIILRHLLSFQLII*IQHLKV
Trigger: GACTTTCAAATGCTGTATGCATATGATCAGCTGAAA...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCACATGGAGACAGGATaGATCATATACAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQHMETG*IIYSLE
Trigger: TTCCAAACTGTATATGATGCATCCTGTCTCCATGTG...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGGATTTATTCTGTCTTaGTTGCAAGCTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQGFILS*LQAFWF
Trigger: AAACCAGAAAGCTTGCAACCAAGACAGAATAAATCC...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCGGATTTATTCTGTCTTaGTTGCAAGCTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAGFILS*LQAFWF
Trigger: AAACCAGAAAGCTTGCAACCAAGACAGAATAAATCC...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCTGGAAGACATTTTTGTaGAATATGGGGAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAWKTFL*NMGRVE
Trigger: TTCTACTCTCCCCATATTCCACAAAAATGTCTTCCA...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR GCA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGTTTCAGCTGATCATATaGATACAGCATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: CYQVASHNYLKASLELKQFQLII*IQHLKV
Trigger: GACTTTCAAATGCTGTATGCATATGATCAGCTGAAA...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGGTCCAAACTTCTGCATaGATAAAATATGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQVQTSA*IKYEPC
Trigger: ACAAGGCTCATATTTTATCCATGCAGAAGTTTGGAC...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAGTCCAAACTTCTGCATaGATAAAATATGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKVQTSA*IKYEPC
Trigger: ACAAGGCTCATATTTTATCCATGCAGAAGTTTGGAC...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAATGGAAGACATTTTTGTaGAATATGGGGAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SCYQVASHNYLKASLELKWKTFL*NMGRVE
Trigger: TTCTACTCTCCCCATATTCCACAAAAATGTCTTCCA...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CCA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCATTCTTGCTACCAAGTaGCCTCACATAATTATCTTA +
Preference number: 4 (lower is better)
Translates to: ILHMETGCIIYSLEDLLAILATK*PHIIIL
Trigger: TAAGATAATTATGTGAGGCCACTTGGTAGCAAGAAT...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTTCAGTTTTATTATGGTaGATTTTCTCCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVISVLLW*IFSRVF
Trigger: GAAGACACGGGAGAAAATCCACCATAATAAAACTGA...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR GCA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGTTTCAGCTGATCATATaGATACAGCATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQFQLII*IQHLKV
Trigger: GACTTTCAAATGCTGTATGCATATGATCAGCTGAAA...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CCA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTATTCTTGCTACCAAGTaGCCTCACATAATTATCTTA +
Preference number: 4 (lower is better)
Translates to: SHNYLKASLELKQVGLVIILATK*PHIIIL
Trigger: TAAGATAATTATGTGAGGCCACTTGGTAGCAAGAAT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CCA 90 bp CTCCAGAGGGCCACCAGGACTTTGGTCTTCGCCCCGAGCGTCCACTaGCCAAACCGCCGACCCTGCCCACCCGAGGGCCGGGCGCACCGC +
Preference number: 5 (lower is better)
Translates to: LQRATRTLVFAPSVH*PNRRPCPPEGRAHR
Trigger: GCGGTGCGCCCGGCCCTCGGGTGGGCAGGGTCGGCGGTTTGGCCAGTGGACGCTCGGGGCGAAGACCAAAGTCCTGGTGGCCCTCTGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS GCA 90 bp CAGCTCCCCAGCCCAGCTTCCCGCCGCCCGCCGAACCTGCAGTGTTaGGCTCCCGAGAGCCGGCGGCGGCAGACATTTCCCTGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QLPSPASRRPPNLQC*APESRRRQTFPCLL
Trigger: AAGCAGGCAGGGAAATGTCTGCCGCCGCCGGCTCTCGGGAGCGCAACACTGCAGGTTCGGCGGGCGGCGGGAAGCTGGGCTGGGGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS CCA 90 bp AACTTCTGCCCCAGTGTCCCAGCCTCCAGAGGGCCACCAGGACTTTaGTCTTCGCCCCGAGCGTCCACTGGCCAAACCGCCGACCCTGCC +
Preference number: 5 (lower is better)
Translates to: NFCPSVPASRGPPGL*SSPRASTGQTADPA
Trigger: GGCAGGGTCGGCGGTTTGGCCAGTGGACGCTCGGGGCGAAGACCAAAGTCCTGGTGGCCCTCTGGAGGCTGGGACACTGGGGCAGAAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS CCA 90 bp CCCCCTCAGCCAGCGTCTCCTGGATTGCCACAGACTGGTCCATGCTaGCCCCTGCTGAGCGCACACACCCTCCTGAGCTGTCACCACAGG +
Preference number: 5 (lower is better)
Translates to: PPQPASPGLPQTGPC*PLLSAHTLLSCHHR
Trigger: CCTGTGGTGACAGCTCAGGAGGGTGTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS GCA 90 bp ATTCCCCCTCAGCCAGCGTCTCCTGGATTGCCACAGACTGGTCCATaGTGGCCCCTGCTGAGCGCACACACCCTCCTGAGCTGTCACCAC +
Preference number: 5 (lower is better)
Translates to: IPPQPASPGLPQTGP*WPLLSAHTLLSCHH
Trigger: GTGGTGACAGCTCAGGAGGGTGTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS CCA 90 bp ACGCAGTATTCCCCCTCAGCCAGCGTCTCCTGGATTGCCACAGACTaGTCCATGCTGGCCCCTGCTGAGCGCACACACCCTCCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TQYSPSASVSWIATD*SMLAPAERTHPPEL
Trigger: CAGCTCAGGAGGGTGTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAATACTGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS CCA 90 bp CCTTGCACCGCGATGACGCAGTATTCCCCCTCAGCCAGCGTCTCCTaGATTGCCACAGACTGGTCCATGCTGGCCCCTGCTGAGCGCACA +
Preference number: 5 (lower is better)
Translates to: PCTAMTQYSPSASVS*IATDWSMLAPAERT
Trigger: TGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAATACTGCGTCATCGCGGTGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS GCA 90 bp GGCCGAGTTACAACCGCGCGGCGTTGGCATCTCCAGCTCCAGCTCTaGGCACCTATACCGAGACAGCCACAGGAATTCAGGATCCCGGGT +
Preference number: 5 (lower is better)
Translates to: GRVTTARRWHLQLQL*APIPRQPQEFRIPG
Trigger: ACCCGGGATCCTGAATTCCTGTGGCTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGTAACTCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AAGACTCCAGCCCTGTACACTGCGCTATCATCACAGGGGCTGAGAACTGACAGAGCCGAACCTGCAGTGTaGCGCTCCCGAGAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: KTPALYTALSSQGLRTDRAEPAV*RSREPA
Trigger: CGCCGGCTCTCGGGAGCGCAACACTGCAGGTTCGGC...TCTGTCAGTTCTCAGCCCCTGTGATGATAGCGCAGTGTACAGGGCTGGAGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp ACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCATACAACCGCGCGGCGTaGGCATCTCCAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: TSFCCHWPCPPPIVWILAYNRAA*ASPAPA
Trigger: AGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGTA...TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTACCTGCCTCCGCCAATaGTCGCGTACCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KPKEDANYQHHQALRSHLTCLRQ*SRTLAR
Trigger: CCTGGCCAGGGTACGCGACAATTGGCGGAGGCAGGT...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAACCTGCCTCCGCCAATaGTCGCGTACCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKTCLRQ*SRTLAR
Trigger: CCTGGCCAGGGTACGCGACAATTGGCGGAGGCAGGT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373026.5
CDS-3UTR CAA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCGGGGCCTGGATACCATaGCTCAGCCACAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: AASACILAIQLIGLSGLSGAWIP*LSHSRR
Trigger: CCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCC...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CCAAGCCTTGTAAGAGCAAGTGGAGGGCTGGCCCACACTTTACACAGCTACTTGCCAGCGTCTCCTGGATaGCCACAGACTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: PSLVRASGGLAHTLHSYLPASPG*PQTGPC
Trigger: GCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGG...CAAGTAGCTGTGTAAAGTGTGGGCCAGCCCTCCACTTGCTCTTACAAGGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATCTCACACAGCACACCTaGCACCGCGATGACGCAGTA +
Preference number: 5 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDLTQHT*HRDDAV
Trigger: TACTGCGTCATCGCGGTGCAAGGTGTGCTGTGTGAG...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTTACAACCGCGCGGCGTaGGCATCTCCAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGYNRAA*ASPAPA
Trigger: AGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGTA...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATTACAACCGCGCGGCGTaGGCATCTCCAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNYNRAA*ASPAPA
Trigger: AGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGTA...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCGCTTTCTGGTTTATCTaGACCCCTGGAGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCAFWFI*TPGALV
Trigger: GACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGC...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATATCGCCACGCCTCCCTaGTTGCCCATCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNIATPP*LPILPM
Trigger: CATGGGGAGGATGGGCAACAAGGGAGGCGTGGCGAT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GAGGTCACACAGCGAGTTCGGAACGGAGCTTTACTAAAACCCCAGCCTCCGGATCTGCTGCCATTGGCCTaGTCCTCCGCCAATTGTCTG +
Preference number: 5 (lower is better)
Translates to: EVTQRVRNGALLKPQPPDLLPLA*SSANCL
Trigger: CAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAG...ATCCGGAGGCTGGGGTTTTAGTAAAGCTCCGTTCCGAACTCGCTGTGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATAACCACCTCCGCCAATaGTCGCGTACCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNNHLRQ*SRTLAR
Trigger: CCTGGCCAGGGTACGCGACAATTGGCGGAGGTGGTT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373024.8
ENST00000458109.6
CDS TCA 90 bp GCCTGGACAGGCCCTGGCAACTTCGTGGAGGAACATCCTGGTTTGTaGACCAAAGGGCAGTTGGAATACGAGGCTAAGCTCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: AWTGPGNFVEEHPGL*TKGQLEYEAKLCCV
Trigger: GACACAGCAGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS GCA 90 bp GCTCCTGGAACCCTACACAATAGACATCTGGGGCCTGGATACCATTaGTCAGCCACAGCCGGAGGCATTCTTTGGGGGACTGCCCATTTA +
Preference number: 5 (lower is better)
Translates to: APGTLHNRHLGPGYH*SATAGGILWGTAHL
Trigger: TAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTAGGGTTCCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000467066.1
CDS-3UTR CAA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTCCAGCGTCTCCTGGATaGCCACAGACTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGPASPG*PQTGPC
Trigger: GCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGG...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CAA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGGAACCACCTGCAGTGTaGCGCTCCCGAGAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: QVASHNYLKASLELKQVGEPPAV*RSREPA
Trigger: CGCCGGCTCTCGGGAGCGCAACACTGCAGGTGGTTC...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CAA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGAACCACCTGCAGTGTaGCGCTCCCGAGAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKEPPAV*RSREPA
Trigger: CGCCGGCTCTCGGGAGCGCAACACTGCAGGTGGTTC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373027.5
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGCCACGCCTCCCTTGTaGCCCATCCTCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNATPPL*PILPMI
Trigger: AATCATGGGGAGGATGGGCAACAAGGGAGGCGTGGC...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCTGTCATATCAAGCTTTaGGTGACCAGCTGGGTTTCG +
Preference number: 5 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCCHIKL*VTSWVS
Trigger: CGAAACCCAGCTGGTCACCAAAAGCTTGATATGACA...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTCAGGATTTCGTCATGTaGCCCAGCCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: HGLALVYWLRTQHPPLSAQDFVM*PSLVLN
Trigger: GTTCAAGACCAGGCTGGGCAACATGACGAAATCCTG...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGAACCACCTGCAGTGTaGCGCTCCCGAGAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: HNYLKASLELKQVGLVIGEPPAV*RSREPA
Trigger: CGCCGGCTCTCGGGAGCGCAACACTGCAGGTGGTTC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGGGGCCTGGATACCATaGCTCAGCCACAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVGAWIP*LSHSRR
Trigger: CCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCGCTGCATGCTCCTGTTaGACATATAACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCAACSC*TYNSSI
Trigger: TATGCTGCTGTTATATGTCAAACAGGAGCATGCAGC...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCATCGCCACGCCTCCCTaGTTGCCCATCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPIATPP*LPILPM
Trigger: CATGGGGAGGATGGGCAACAAGGGAGGCGTGGCGAT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGTGTCATATCAAGCTTTaGGTGACCAGCTGGGTTTCG +
Preference number: 5 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLCHIKL*VTSWVS
Trigger: CGAAACCCAGCTGGTCACCAAAAGCTTGATATGACA...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCAGCCTCAAACTCCTGTTGCCATCCAACTCATaGGCCTTTCAGGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: PGLAYSDVVIGHCSLKLLLPSNS*AFQDFP
Trigger: TGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAA...CAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CATGGCCTGGCTCTGGTGTACTGGCTGAGAACACAGCACCCACCTCTTTCTGCTCTCGGAAGATCAGGATaGAAGAGCAAGCTCAGATGG +
Preference number: 5 (lower is better)
Translates to: HGLALVYWLRTQHPPLSALGRSG*KSKLRW
Trigger: CCATCTGAGCTTGCTCTTCAATCCTGATCTTCCGAG...AGCAGAAAGAGGTGGGTGCTGTGTTCTCAGCCAGTACACCAGAGCCAGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp ACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCACTCTTTCTGCTGCCATaGGCCTTGTCCTCCGCCAAT +
Preference number: 5 (lower is better)
Translates to: TSFCCHWPCPPPIVWILALFLLP*ALSSAN
Trigger: ATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAG...TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS TCA 90 bp AGTTGCCAGAACACTCCAAGCAGTTATGGTAGGTGCTGTAACAGATaGCAGGCTCTGGAAGGCTCTCCAGGAAAAGCAGCAGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: SCQNTPSSYGRCCNR*QALEGSPGKAAGLR
Trigger: CCGAAGCCCTGCTGCTTTTCCTGGAGAGCCTTCCAGAGCCTGTCATCTGTTACAGCACCTACCATAACTGCTTGGAGTGTTCTGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS CCA 90 bp GCAACTTCGTGGAGGAACATCCTGGTTTGTGAACCAAAGGGCAGTTaGAATACGAGGCTAAGCTCTGCTGTGTCCAGCTGGACGGTCACA +
Preference number: 5 (lower is better)
Translates to: ATSWRNILVCEPKGS*NTRLSSAVSSWTVT
Trigger: TGTGACCGTCCAGCTGGACACAGCAGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCTACAACCGCGCGGCGTaGGCATCTCCAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFYNRAA*ASPAPA
Trigger: AGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGTA...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CAA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATACAACCGCGCGGCGTaGGCATCTCCAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKYNRAA*ASPAPA
Trigger: AGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGTA...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CAA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCACCTGCCTCCGCCAATaGTCGCGTACCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRTCLRQ*SRTLAR
Trigger: CCTGGCCAGGGTACGCGACAATTGGCGGAGGCAGGT...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373023.6
ENST00000373026.5
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATTTGACCCCTGGAGCTTaGGTCCATAGGCACTCCCTT +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNLTPGA*VHRHSL
Trigger: AAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAA...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCGGGGCCTGGATACCATaGCTCAGCCACAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRGAWIP*LSHSRR
Trigger: CCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCC...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATCGCCACGCCTCCCTaGTTGCCCATCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVIATPP*LPILPM
Trigger: CATGGGGAGGATGGGCAACAAGGGAGGCGTGGCGAT...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGACTGAGCTGACAGGCTaGTGGTCACTGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWTELTG*WSLVFR
Trigger: CCTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGAAGCCTCTGCTGGGGTaGGCATTCAGCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWKPLLG*AFSHCL
Trigger: TAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCTT...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CAGCACCATCAGGCGCTTCGATCGCACCTTGTGATGGCTGCAATGAAGGAGAAACTTGTCCTCCGCCAATaGTCTGGATTCTGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: QHHQALRSHLVMAAMKEKLVLRQ*SGFWQS
Trigger: AGACTGCCAGAATCCAGACAATTGGCGGAGGACAAG...TTTCTCCTTCATTGCAGCCATCACAAGGTGCGATCGAAGCGCCTGATGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS CCA 90 bp ACCATCATCCAGAGCTCTTTGGGGATTTCCATGGGGCTATCCAACTaGCTCCCATCATCTCCAGTCCATACTGGCATCAGAGTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: TIIQSSLGISMGLSN*LPSSPVHTGIRVSS
Trigger: TGAGCTGACTCTGATGCCAGTATGGACTGGAGATGATGGGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000474758.1
CDS-3UTR CAA 90 bp GGTCTCCCTCTCTCACCCGGGCTGGCGTACAGTGATGTGGTCATAGGTCACTGCTGGATTTATTCTGTCTaGGTTGCAAGCTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: GLPLSPGLAYSDVVIGHCWIYSV*VASFLV
Trigger: AACCAGAAAGCTTGCAACCAAGACAGAATAAATCCA...GCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACAGCCGGAGGCATTCTTaGGGGGACTGCCCATTTACA +
Preference number: 5 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNSRRHS*GDCPFT
Trigger: TGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCT...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGGGGCCTGGATACCATaGCTCAGCCACAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: CYQVASHNYLKASLELKQGAWIP*LSHSRR
Trigger: CCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCC...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGGGGCCTGGATACCATaGCTCAGCCACAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: CHSCYQVASHNYLKASLEGAWIP*LSHSRR
Trigger: CCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCGCCACGCCTCCCTTGTaGCCCATCCTCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFATPPL*PILPMI
Trigger: AATCATGGGGAGGATGGGCAACAAGGGAGGCGTGGC...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCGCCACGCCTCCCTTGTaGCCCATCCTCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: TSSDRALKASEVAVAYFIATPPL*PILPMI
Trigger: AATCATGGGGAGGATGGGCAACAAGGGAGGCGTGGC...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCATCGCCACGCCTCCCTaGTTGCCCATCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRIATPP*LPILPM
Trigger: CATGGGGAGGATGGGCAACAAGGGAGGCGTGGCGAT...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CCA 90 bp ATCTTGACCCCTGGAGCTTTGGTCCATAGGCACTCCCTTCCCATTTaGTCTCAAACCATCAAAGTTAGAACCACCTGCAGTGTTGCGCTC +
Preference number: 5 (lower is better)
Translates to: ILTPGALVHRHSLPI*SQTIKVRTTCSVAL
Trigger: GAGCGCAACACTGCAGGTGGTTCTAACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373026.5
ENST00000373027.5
CDS CCA 90 bp GGTACAGGTAATCAACCATCATCCAGAGCTCTTTGGGGATTTCCATaGGGCTATCCAACTGGCTCCCATCATCTCCAGTCCATACTGGCA +
Preference number: 5 (lower is better)
Translates to: GTGNQPSSRALWGFP*GYPTGSHHLQSILA
Trigger: TGCCAGTATGGACTGGAGATGATGGGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTTGATTACCTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000470364.5
ENST00000474758.1
CDS CCA 90 bp GGACAGCATTTCGGTACAGGTAATCAACCATCATCCAGAGCTCTTTaGGGATTTCCATGGGGCTATCCAACTGGCTCCCATCATCTCCAG +
Preference number: 5 (lower is better)
Translates to: GQHFGTGNQPSSRAL*GFPWGYPTGSHHLQ
Trigger: CTGGAGATGATGGGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTTGATTACCTGTACCGAAATGCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000470364.5
ENST00000474758.1
CDS CCA 90 bp ATCTTGACCCCTGGAGCTTTGGTCCATAGGCACTCCCTTCCCATTTaGTCTCAAACCATCAAAGTTAGAACCACCTCCGCCAATTGTCGC +
Preference number: 5 (lower is better)
Translates to: ILTPGALVHRHSLPI*SQTIKVRTTSANCR
Trigger: GCGACAATTGGCGGAGGTGGTTCTAACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373024.8
ENST00000458109.6
CDS CCA 90 bp ACCATCATCCAGAGCTCTTTGGGGATTTCCATGGGGCTATCCAACTaGCTCCCATCATCTCCAGTCCATACTGGCATCAGAGTCATAGGT +
Preference number: 5 (lower is better)
Translates to: TIIQSSLGISMGLSN*LPSSPVHTGIRVIG
Trigger: ACCTATGACTCTGATGCCAGTATGGACTGGAGATGATGGGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470364.5
CDS-3UTR CAA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCCCAGCGTCTCCTGGATaGCCACAGACTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: AILATKWPHIIILRHLLSPASPG*PQTGPC
Trigger: GCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGG...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACTTGACCCCTGGAGCTTaGGTCCATAGGCACTCCCTT +
Preference number: 5 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHLTPGA*VHRHSL
Trigger: AAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAA...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCGCCACGCCTCCCTTGTaGCCCATCCTCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRATPPL*PILPMI
Trigger: AATCATGGGGAGGATGGGCAACAAGGGAGGCGTGGC...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGCCACGCCTCCCTTGTaGCCCATCCTCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIATPPL*PILPMI
Trigger: AATCATGGGGAGGATGGGCAACAAGGGAGGCGTGGC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCAAGATCACATCATGGTaGCTGATGGTGAGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: AASACILAIQLIGLSGLSKITSW*LMVRGG
Trigger: TCCCCCTCTCACCATCAGCAACCATGATGTGATCTT...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTAAAGCACCAGGGGCCCTaGCAGAAAACCCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LKGNERLRSLHISQSGQLKHQGP*QKTLEL
Trigger: CAGCTCCAGGGTTTTCTGCAAGGGCCCCTGGTGCTT...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp ACCTCTTTCTGCTGCCATTGGCCTTGTCCTCCGCCAATTGTCTGGATTCTGGCATTGACAGGCTCTTCATaGCTGGCAAATGACTGTCAC +
Preference number: 5 (lower is better)
Translates to: TSFCCHWPCPPPIVWILALTGSS*LANDCH
Trigger: GTGACAGTCATTTGCCAGCAATGAAGAGCCTGTCAA...TGCCAGAATCCAGACAATTGGCGGAGGACAAGGCCAATGGCAGCAGAAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGAACCACCTCCGCCAATaGTCGCGTACCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CHSCYQVASHNYLKASLENHLRQ*SRTLAR
Trigger: CCTGGCCAGGGTACGCGACAATTGGCGGAGGTGGTT...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373024.8
ENST00000458109.6
CDS CCA 90 bp GTGGTAGGTCCAAGATTGGCTCTCTCATGTAACACAGTGTATGAATaGGAGACCCAAAACAGCTGGGCAGGTAGTTCCCAGACACAGACA +
Preference number: 5 (lower is better)
Translates to: VVGPRLALSCNTVYE*ETQNSWAGSSQTQT
Trigger: TGTCTGTGTCTGGGAACTACCTGCCCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTTACATGAGAGAGCCAATCTTGGACCTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000474758.1
CDS-3UTR CAA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGCCAGCGTCTCCTGGATaGCCACAGACTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: CYQVASHNYLKASLELKQPASPG*PQTGPC
Trigger: GCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGG...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGCACTCCCTTCCCATTaGGTCTCAAACCATCAAAGT +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNALPSH*VSNHQS
Trigger: ACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGC...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGCACTCCCTTCCCATTaGGTCTCAAACCATCAAAGT +
Preference number: 5 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGALPSH*VSNHQS
Trigger: ACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGTTGACCCCTGGAGCTTaGGTCCATAGGCACTCCCTT +
Preference number: 5 (lower is better)
Translates to: QVASHNYLKASLELKQVGLTPGA*VHRHSL
Trigger: AAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAA...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGCCGGAGGCATTCTTaGGGGGACTGCCCATTTACA +
Preference number: 5 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFSRRHS*GDCPFT
Trigger: TGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAAGCCGGAGGCATTCTTaGGGGGACTGCCCATTTACA +
Preference number: 5 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQSRRHS*GDCPFT
Trigger: TGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCT...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTATCGCCACGCCTCCCTaGTTGCCCATCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: SHNYLKASLELKQVGLVIIATPP*LPILPM
Trigger: CATGGGGAGGATGGGCAACAAGGGAGGCGTGGCGAT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCAAGATCACATCATGGTaGCTGATGGTGAGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIKITSW*LMVRGG
Trigger: TCCCCCTCTCACCATCAGCAACCATGATGTGATCTT...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAATTGCCATCCAACTCATaGGCCTTTCAGGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKLPSNS*AFQDFP
Trigger: TGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAA...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGAACGGGGGTCGAGTTaGCATATGCATATACACATC +
Preference number: 5 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWERGSS*HMHIHI
Trigger: GATGTGTATATGCATATGCAAACTCGACCCCCGTTC...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTTACAGTTTGGAAGACTaGCTGGCCCAGAAAATCCCA +
Preference number: 5 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGYSLED*LAQKIP
Trigger: TGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTA...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTGCATCATATACAGTTaGGAAGACTTGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSSFCLHSCHPTHWPFRTCIIYS*EDLLAQ
Trigger: CTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCA...AGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTAGGGCCACCAGGACTTaGGTCTTCGCCCCGAGCGTC +
Preference number: 5 (lower is better)
Translates to: KTETVTIIPHQHMASLCFRATRT*VFAPSV
Trigger: GACGCTCGGGGCGAAGACCAAAGTCCTGGTGGCCCT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTTGACCCCTGGAGCTTaGGTCCATAGGCACTCCCTT +
Preference number: 5 (lower is better)
Translates to: AILATKWPHIIILRHLLSLTPGA*VHRHSL
Trigger: AAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAA...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCGCTTTCTGGTTTATCTaGACCCCTGGAGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPAFWFI*TPGALV
Trigger: GACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGC...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCAGCCGGAGGCATTCTTaGGGGGACTGCCCATTTACA +
Preference number: 5 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRSRRHS*GDCPFT
Trigger: TGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCT...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATACCACTCTTCCTCCTTaGGGGTATCGTGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNTTLPP*GYRERK
Trigger: TTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTGCTGCATGCTCCTGTTaGACATATAACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: SSRLTALSVLTNGGLNWGAACSC*TYNSSI
Trigger: TATGCTGCTGTTATATGTCAAACAGGAGCATGCAGC...ACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCCTTCAAAGACAGTCTTaGCGGCCACCTGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: AASACILAIQLIGLSGLSLQRQS*RPPEFS
Trigger: TGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAG...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGCTTCAAAGACAGTCTTaGCGGCCACCTGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWLQRQS*RPPEFS
Trigger: TGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAG...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCACTGAGCTGACAGGCTaGTGGTCACTGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AILATKWPHIIILRHLLSTELTG*WSLVFR
Trigger: CCTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGT...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGACTGAGCTGACAGGCTaGTGGTCACTGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VCICIYTSSDRALKASEVTELTG*WSLVFR
Trigger: CCTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGT...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATAGAATGTCCTCAATTTaGTCTTCACCCGAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNRMSSI*SSPELS
Trigger: GCTCAACTCGGGTGAAGACAAAATTGAGGACATTCT...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAAGAATGTCCTCAATTTaGTCTTCACCCGAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKRMSSI*SSPELS
Trigger: GCTCAACTCGGGTGAAGACAAAATTGAGGACATTCT...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCGTGGTAGGTCCAAGATaGGCTCTCTCATGTAACACA +
Preference number: 5 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIVVGPR*ALSCNT
Trigger: TGTGTTACATGAGAGAGCCAATCTTGGACCTACCAC...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCATCCAGAGCTCTTaGGGGATTTCCATGGGGCTA +
Preference number: 5 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHIIQSS*GISMGL
Trigger: TAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGAT...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATCCCAGAAAATCCCACTaGTTTCACCGAACACTCATT +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNPRKSH*FHRTLI
Trigger: AATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGG...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCTACAGTTTGGAAGACTaGCTGGCCCAGAAAATCCCA +
Preference number: 5 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIYSLED*LAQKIP
Trigger: TGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTA...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CTCAGAGTTATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGTGCATCATATACAGTTaGGAAGACTTGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRVIEPLSGQERGSSLHMCIIYS*EDLLAQ
Trigger: CTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCA...CATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGGCTTTCTGGTTTATCTaGACCCCTGGAGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: QVASHNYLKASLELKQVGAFWFI*TPGALV
Trigger: GACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGC...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAGCTTTCTGGTTTATCTaGACCCCTGGAGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQAFWFI*TPGALV
Trigger: GACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGC...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACATCGCTGCATGCTCCTGTTaGACATATAACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: EPLSGQERGSSLHMHIHIAACSC*TYNSSI
Trigger: TATGCTGCTGTTATATGTCAAACAGGAGCATGCAGC...GATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGACACAGAAGGAATGTaGGCATTTTCCATCTTATCC +
Preference number: 5 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWDTEGM*AFSILS
Trigger: GGATAAGATGGAAAATGCCAACATTCCTTCTGTGTC...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAAGACACAGAAGGAATGTaGGCATTTTCCATCTTATCC +
Preference number: 5 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKDTEGM*AFSILS
Trigger: GGATAAGATGGAAAATGCCAACATTCCTTCTGTGTC...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACTTGTCTTCACCCGAGTaGAGCTTTGTAGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHLSSPE*SFVAVI
Trigger: GATGACAGCTACAAAGCTCAACTCGGGTGAAGACAA...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS TCA 90 bp GACTTGGATTTATTCTGTCTTGGTTGCAAGCTTTCTGGTTTATCTTaGCCCCTGGAGCTTTGGTCCATAGGCACTCCCTTCCCATTTGGT +
Preference number: 5 (lower is better)
Translates to: DLDLFCLGCKLSGLS*PLELWSIGTPFPFG
Trigger: ACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCAAGACAGAATAAATCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS TCA 90 bp ATCAATCATTCCAGTATCCAAGCAGTCCCTGATATGTTCAAATTCTaGCCTCAGGCCTGGTTGCTGAAACAGATCTTCCTGCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: INHSSIQAVPDMFKF*PQAWLLKQIFLLDS
Trigger: GCTGTCCAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATACTGGAATGATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000470364.5
CDS GCA 90 bp CTGGAATGTGAGCTCACCCTCTGTGAAGCCTTCAAAGACAGTCTTTaGGGCCACCTGAATTTTCAGCTGATCATATGCATACAGCATTTG +
Preference number: 5 (lower is better)
Translates to: LECELTLCEAFKDSL*GHLNFQLIICIQHL
Trigger: CAAATGCTGTATGCATATGATCAGCTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAGGCTTCACAGAGGGTGAGCTCACATTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CCA 90 bp TCTGAAAACAGAACTCTCGCTTGGACAGGGACACAGAAGGAATGTTaGCATTTTCCATCTTATCCAGGGAGCGAACAATTTCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SENRTLAWTGTQKEC*HFPSYPGSEQFPPV
Trigger: CACTGGAGGAAATTGTTCGCTCCCTGGATAAGATGGAAAATGCCAACATTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGCACTCCCTTCCCATTaGGTCTCAAACCATCAAAGT +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVALPSH*VSNHQS
Trigger: ACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGTTGACCCCTGGAGCTTaGGTCCATAGGCACTCCCTT +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQLTPGA*VHRHSL
Trigger: AAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAA...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATTGGATTTATTCTGTCTaGGTTGCAAGCTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNWIYSV*VASFLV
Trigger: AACCAGAAAGCTTGCAACCAAGACAGAATAAATCCA...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGAGCCGGAGGCATTCTTaGGGGGACTGCCCATTTACA +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQSRRHS*GDCPFT
Trigger: TGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCT...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAAAGATCACATCATGGTaGCTGATGGTGAGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIKITSW*LMVRGG
Trigger: TCCCCCTCTCACCATCAGCAACCATGATGTGATCTT...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTACTGAGCTGACAGGCTaGTGGTCACTGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SHNYLKASLELKQVGLVITELTG*WSLVFR
Trigger: CCTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAAAGCCTCTGCTGGGGTaGGCATTCAGCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: SCYQVASHNYLKASLELKKPLLG*AFSHCL
Trigger: TAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCTT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGAAGCCTCTGCTGGGGTaGGCATTCAGCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQKPLLG*AFSHCL
Trigger: TAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCTT...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTAAGCCTCTGCTGGGGTaGGCATTCAGCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: SHNYLKASLELKQVGLVIKPLLG*AFSHCL
Trigger: TAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCTT...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATTGTCTTCACCCGAGTaGAGCTTTGTAGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKLSSPE*SFVAVI
Trigger: GATGACAGCTACAAAGCTCAACTCGGGTGAAGACAA...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAATCCCAGAATGTCCTCAATTTaGTCTTCACCCGAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GDRMHHIQFGRLAGPENPRMSSI*SSPELS
Trigger: GCTCAACTCGGGTGAAGACAAAATTGAGGACATTCT...GGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACAGAATGTCCTCAATTTaGTCTTCACCCGAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHRMSSI*SSPELS
Trigger: GCTCAACTCGGGTGAAGACAAAATTGAGGACATTCT...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAGTGGTAGGTCCAAGATaGGCTCTCTCATGTAACACA +
Preference number: 5 (lower is better)
Translates to: FCLHSCHPTHWPFRTFHQVVGPR*ALSCNT
Trigger: TGTGTTACATGAGAGAGCCAATCTTGGACCTACCAC...TTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCATCATCCAGAGCTCTTaGGGGATTTCCATGGGGCTA +
Preference number: 5 (lower is better)
Translates to: HNYLKASLELKQVGLVIGIIQSS*GISMGL
Trigger: TAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGAT...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTATGTCATATCAAGCTTTaGGTGACCAGCTGGGTTTCG +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVCHIKL*VTSWVS
Trigger: CGAAACCCAGCTGGTCACCAAAAGCTTGATATGACA...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGAACGGGGGTCGAGTTaGCATATGCATATACACATC +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVERGSS*HMHIHI
Trigger: GATGTGTATATGCATATGCAAACTCGACCCCCGTTC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAATACAGTTTGGAAGACTaGCTGGCCCAGAAAATCCCA +
Preference number: 5 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEYSLED*LAQKIP
Trigger: TGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTA...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS TCA 90 bp TGCTGGCAGAGAGGTTATCAATCATTCCAGTATCCAAGCAGTCCCTaGTATGTTCAAATTCTGACCTCAGGCCTGGTTGCTGAAACAGAT +
Preference number: 5 (lower is better)
Translates to: CWQRGYQSFQYPSSP*YVQILTSGLVAETD
Trigger: ATCTGTTTCAGCAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATACTGGAATGATTGATAACCTCTCTGCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CAA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGCACTCCCTTCCCATTaGGTCTCAAACCATCAAAGT +
Preference number: 5 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIALPSH*VSNHQS
Trigger: ACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGTTTATTCTGTCTTGGTaGCAAGCTTTCTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWFILSW*QAFWFI
Trigger: GATAAACCAGAAAGCTTGCAACCAAGACAGAATAAA...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGGGTACTAGGCTCAGGAAATTTATTCTGTCTTGGTaGCAAGCTTTCTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: ALSVLTNGGLNWGTRLRKFILSW*QAFWFI
Trigger: GATAAACCAGAAAGCTTGCAACCAAGACAGAATAAA...TTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATTCAGTAATTTCGGACTaGGATTTATTCTGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: GGFSPVSSRLTALSVLTNSVISD*DLFCLG
Trigger: ACCAAGACAGAATAAATCCAAGTCCGAAATTACTGA...ATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGTCTTCACGACTCACAGCGCTGAGTGTGCTAACCAATGGTGGGCTTAATTGGTCAGTAATTTCGGACTaGGATTTATTCTGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: VSSRLTALSVLTNGGLNWSVISD*DLFCLG
Trigger: ACCAAGACAGAATAAATCCAAGTCCGAAATTACTGA...CCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCTCAGTAATTTCGGACTaGGATTTATTCTGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: AASACILAIQLIGLSGLSSVISD*DLFCLG
Trigger: ACCAAGACAGAATAAATCCAAGTCCGAAATTACTGA...GGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCACCACTCTTCCTCCTTaGGGGTATCGTGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFTTLPP*GYRERK
Trigger: TTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGT...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGACCACTCTTCCTCCTTaGGGGTATCGTGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: QVASHNYLKASLELKQVGTTLPP*GYRERK
Trigger: TTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGT...CCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGCTGCATGCTCCTGTTaGACATATAACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVAACSC*TYNSSI
Trigger: TATGCTGCTGTTATATGTCAAACAGGAGCATGCAGC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGAAGATCACATCATGGTaGCTGATGGTGAGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: CYQVASHNYLKASLELKQKITSW*LMVRGG
Trigger: TCCCCCTCTCACCATCAGCAACCATGATGTGATCTT...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAACTTCAAAGACAGTCTTaGCGGCCACCTGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: THGDRMHHIQFGRLAGPELQRQS*RPPEFS
Trigger: TGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAG...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCAGAATGTCCTCAATTTaGTCTTCACCCGAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: TSSDRALKASEVAVAYFIRMSSI*SSPELS
Trigger: GCTCAACTCGGGTGAAGACAAAATTGAGGACATTCT...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGTGGTAGGTCCAAGATaGGCTCTCTCATGTAACACA +
Preference number: 5 (lower is better)
Translates to: HNYLKASLELKQVGLVIGVVGPR*ALSCNT
Trigger: TGTGTTACATGAGAGAGCCAATCTTGGACCTACCAC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCGTGGTAGGTCCAAGATaGGCTCTCTCATGTAACACA +
Preference number: 5 (lower is better)
Translates to: PAFLPSNSLAFQDFPSNIVVGPR*ALSCNT
Trigger: TGTGTTACATGAGAGAGCCAATCTTGGACCTACCAC...GATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGATCATCCAGAGCTCTTaGGGGATTTCCATGGGGCTA +
Preference number: 5 (lower is better)
Translates to: CYQVASHNYLKASLELKQIIQSS*GISMGL
Trigger: TAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGAT...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CAA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCTGTCATATCAAGCTTTaGGTGACCAGCTGGGTTTCG +
Preference number: 5 (lower is better)
Translates to: HNYLKASLELKQVGLVIGCHIKL*VTSWVS
Trigger: CGAAACCCAGCTGGTCACCAAAAGCTTGATATGACA...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGTCATATCAAGCTTTaGGTGACCAGCTGGGTTTCG +
Preference number: 5 (lower is better)
Translates to: AILATKWPHIIILRHLLSCHIKL*VTSWVS
Trigger: CGAAACCCAGCTGGTCACCAAAAGCTTGATATGACA...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTTGCCATCCAACTCATaGGCCTTTCAGGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: AILATKWPHIIILRHLLSLPSNS*AFQDFP
Trigger: TGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAA...GCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCCCCAGAAAATCCCACTaGTTTCACCGAACACTCATT +
Preference number: 5 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFPRKSH*FHRTLI
Trigger: AATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGG...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGGCTGTAGCCTATTTTATCCCCAGAAAATCCCACTaGTTTCACCGAACACTCATT +
Preference number: 5 (lower is better)
Translates to: TSSDRALKASEVAVAYFIPRKSH*FHRTLI
Trigger: AATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGG...GATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AAGCCCAAGGAAGATGCAAACTATCAGCACCATCAGGCGCTTCGATCGCACCTTAAAGGAAATGAAAGATaGAGATCCCTGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: KPKEDANYQHHQALRSHLKGNER*RSLHIS
Trigger: AGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTT...AAGGTGCGATCGAAGCGCCTGATGGTGCTGATAGTTTGCATCTTCCTTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS TCA 90 bp TTCACAATTGTATCTCGCAGTCCAAACTTCTGCATGGATAAAATATaGGCCTTGTCCGACACTGTGATAGTGGAGGAGCGAACCATGTCA +
Preference number: 5 (lower is better)
Translates to: FTIVSRSPNFCMDKI*ALSDTVIVEERTMS
Trigger: TGACATGGTTCGCTCCTCCACTATCACAGTGTCGGACAAGGCTCATATTTTATCCATGCAGAAGTTTGGACTGCGAGATACAATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS GCA 90 bp TCTCAAGTGCCTACTATAGTCCAAGAACTGTATACACGATCCAAGTaGACGAGAAAGACTGTGCACAGAAAACTGGTTGCTTACCACTTG +
Preference number: 5 (lower is better)
Translates to: SQVPTIVQELYTRSK*TRKTVHRKLVAYHL
Trigger: CAAGTGGTAAGCAACCAGTTTTCTGTGCACAGTCTTTCTCGTGCACTTGGATCGTGTATACAGTTCTTGGACTATAGTAGGCACTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487328.1
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGGCTTTCTGGTTTATCTaGACCCCTGGAGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQAFWFI*TPGALV
Trigger: GACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGC...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTGGCTGTAGCCTATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTTTATTCTGTCTTGGTaGCAAGCTTTCTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: VAVAYFIQQLLPAFLPSNFILSW*QAFWFI
Trigger: GATAAACCAGAAAGCTTGCAACCAAGACAGAATAAA...GTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAACCACTCTTCCTCCTTaGGGGTATCGTGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQITTLPP*GYRERK
Trigger: TTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGT...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GTTTGCATATGCATATACACATCCTCAGACAGAGCACTGAAAGCATCTGAGGTGACCACTCTTCCTCCTTaGGGGTATCGTGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: VCICIYTSSDRALKASEVTTLPP*GYRERK
Trigger: TTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGT...CACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAAAGATCACATCATGGTaGCTGATGGTGAGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: SCYQVASHNYLKASLELKKITSW*LMVRGG
Trigger: TCCCCCTCTCACCATCAGCAACCATGATGTGATCTT...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCCTTCAAAGACAGTCTTaGCGGCCACCTGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: HNYLKASLELKQVGLVIGLQRQS*RPPEFS
Trigger: TGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAG...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATATTACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCTTGTCTTCACCCGAGTaGAGCTTTGTAGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: ILHMETGCIIYSLEDLLALSSPE*SFVAVI
Trigger: GATGACAGCTACAAAGCTCAACTCGGGTGAAGACAA...GGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGATCATCCAGAGCTCTTaGGGGATTTCCATGGGGCTA +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQIIQSS*GISMGL
Trigger: TAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGAT...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
CDS-3UTR CAA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGTTGCCATCCAACTCATaGGCCTTTCAGGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: CHSCYQVASHNYLKASLELPSNS*AFQDFP
Trigger: TGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAA...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGTGCATCATATACAGTTaGGAAGACTTGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CYQVASHNYLKASLELKQCIIYS*EDLLAQ
Trigger: CTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCA...CTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAAAGGAAATGAAAGATTGAGATCCCTGCACATTTCTCAGTCGGGGCAGCTATCAGTTTACAAACTCTaGTGCAACATGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: LKGNERLRSLHISQSGQLSVYKL*CNMPLL
Trigger: GAGGAGTGGCATGTTGCACAAGAGTTTGTAAACTGA...TAGCTGCCCCGACTGAGAAATGTGCAGGGATCTCAATCTTTCATTTCCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGGCACTCCCTTCCCATTaGGTCTCAAACCATCAAAGT +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQALPSH*VSNHQS
Trigger: ACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGC...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCTGAGTTGGATTTATTCTGTCTaGGTTGCAAGCTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QFYYGGFSPVSSRLTALSWIYSV*VASFLV
Trigger: AACCAGAAAGCTTGCAACCAAGACAGAATAAATCCA...ACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTTTATCCAGCAGCTTCTGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCGATGTGATTTCACAATaGTATCTCGCAGTCCAAACT +
Preference number: 5 (lower is better)
Translates to: ILSSSFCLHSCHPTHWPFDVISQ*YLAVQT
Trigger: AGTTTGGACTGCGAGATACAATTGTGAAATCACATC...GAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ACACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAGATGTGATTTCACAATaGTATCTCGCAGTCCAAACT +
Preference number: 5 (lower is better)
Translates to: THGDRMHHIQFGRLAGPEDVISQ*YLAVQT
Trigger: AGTTTGGACTGCGAGATACAATTGTGAAATCACATC...TTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCGACACAGAAGGAATGTaGGCATTTTCCATCTTATCC +
Preference number: 5 (lower is better)
Translates to: HNYLKASLELKQVGLVIGDTEGM*AFSILS
Trigger: GGATAAGATGGAAAATGCCAACATTCCTTCTGTGTC...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCGCGACACAGAAGGAATGTaGGCATTTTCCATCTTATCC +
Preference number: 5 (lower is better)
Translates to: NVSFIMVDFLPCLHDSQRDTEGM*AFSILS
Trigger: GGATAAGATGGAAAATGCCAACATTCCTTCTGTGTC...GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATAGACACAGAAGGAATGTaGGCATTTTCCATCTTATCC +
Preference number: 5 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQIDTEGM*AFSILS
Trigger: GGATAAGATGGAAAATGCCAACATTCCTTCTGTGTC...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp ATTGAGCCATTATCTGGGCAGGAACGGGGGTCGAGTTTGCATATGCATATACACGGATTCTACTTTCAATaGCATGTACTTCACATTCTG +
Preference number: 5 (lower is better)
Translates to: IEPLSGQERGSSLHMHIHGFYFQ*HVLHIL
Trigger: CAGAATGTGAAGTACATGCAATTGAAAGTAGAATCC...GTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTTTGTCTTCACCCGAGTaGAGCTTTGTAGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: SHNYLKASLELKQVGLVILSSPE*SFVAVI
Trigger: GATGACAGCTACAAAGCTCAACTCGGGTGAAGACAA...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAATTGTCTTCACCCGAGTaGAGCTTTGTAGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: SCYQVASHNYLKASLELKLSSPE*SFVAVI
Trigger: GATGACAGCTACAAAGCTCAACTCGGGTGAAGACAA...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGGTGGTAGGTCCAAGATaGGCTCTCTCATGTAACACA +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQVVGPR*ALSCNT
Trigger: TGTGTTACATGAGAGAGCCAATCTTGGACCTACCAC...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAGAACGGGGGTCGAGTTaGCATATGCATATACACATC +
Preference number: 5 (lower is better)
Translates to: SCYQVASHNYLKASLELKERGSS*HMHIHI
Trigger: GATGTGTATATGCATATGCAAACTCGACCCCCGTTC...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTTACAGTTTGGAAGACTaGCTGGCCCAGAAAATCCCA +
Preference number: 5 (lower is better)
Translates to: SHNYLKASLELKQVGLVIYSLED*LAQKIP
Trigger: TGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTA...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTTGCATCATATACAGTTaGGAAGACTTGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SHNYLKASLELKQVGLVICIIYS*EDLLAQ
Trigger: CTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCA...AATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTATTTATTCTGTCTTGGTaGCAAGCTTTCTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVFILSW*QAFWFI
Trigger: GATAAACCAGAAAGCTTGCAACCAAGACAGAATAAA...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAATTTATTCTGTCTTGGTaGCAAGCTTTCTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKFILSW*QAFWFI
Trigger: GATAAACCAGAAAGCTTGCAACCAAGACAGAATAAA...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGCTTCAAAGACAGTCTTaGCGGCCACCTGAATTTTCA +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQLQRQS*RPPEFS
Trigger: TGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAG...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CACATGGAGACAGGATGCATCATATACAGTTTGGAAGACTTGCTGGCCCAGAAAGGATTCTACTTTCAATaGCATGTACTTCACATTCTG +
Preference number: 5 (lower is better)
Translates to: HMETGCIIYSLEDLLAQKGFYFQ*HVLHIL
Trigger: CAGAATGTGAAGTACATGCAATTGAAAGTAGAATCC...TTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp GCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAGGATTCTACTTTCAATaGCATGTACTTCACATTCTG +
Preference number: 5 (lower is better)
Translates to: ASHNYLKASLELKQVGLVGFYFQ*HVLHIL
Trigger: CAGAATGTGAAGTACATGCAATTGAAAGTAGAATCC...TACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS TCA 90 bp GGGCAGGAGAAGGGAAATAGTGAAGTAAGTAGAGAGAACACTTTATaGGAAGTCAATTTTGGCAGGAGCATAATTAGAAGGGTTGATCAG +
Preference number: 5 (lower is better)
Translates to: GQEKGNSEVSRENTL*EVNFGRSIIRRVDQ
Trigger: CTGATCAACCCTTCTAATTATGCTCCTGCCAAAATTGACTTCTCATAAAGTGTTCTCTCTACTTACTTCACTATTTCCCTTCTCCTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487328.1
CDS-3UTR CAA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGTGGATTTATTCTGTCTaGGTTGCAAGCTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: CHSCYQVASHNYLKASLEWIYSV*VASFLV
Trigger: AACCAGAAAGCTTGCAACCAAGACAGAATAAATCCA...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp CATAATTATCTTAAGGCATCTCTTGAGCTGAAACAGGTGGGGCTGGTAATTGGCTCAGTAATTTCGGACTaGGATTTATTCTGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: HNYLKASLELKQVGLVIGSVISD*DLFCLG
Trigger: ACCAAGACAGAATAAATCCAAGTCCGAAATTACTGA...GCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCCTGCATTCTTGCCATCCAACTCATTGGCCTTTCAGGACTTTCCATCAAATATCAGTAATTTCGGACTaGGATTTATTCTGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: CLHSCHPTHWPFRTFHQISVISD*DLFCLG
Trigger: ACCAAGACAGAATAAATCCAAGTCCGAAATTACTGA...TATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TGCCATTCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGGATGTGATTTCACAATaGTATCTCGCAGTCCAAACT +
Preference number: 5 (lower is better)
Translates to: CHSCYQVASHNYLKASLEDVISQ*YLAVQT
Trigger: AGTTTGGACTGCGAGATACAATTGTGAAATCACATC...CTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp AAAACCGAAACCGTAACAATAATTCCTCACCAGCATATGGCTAGTCTCTGTTTTACTTTACACAGCTACTaGACAGGCTCTTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: KTETVTIIPHQHMASLCFTLHSY*TGSSLL
Trigger: CAGCAATGAAGAGCCTGTCAAGTAGCTGTGTAAAGT...AAAACAGAGACTAGCCATATGCTGGTGAGGAATTATTGTTACGGTTTCGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS TCA 90 bp TCAGCTGATCATATGCATACAGCATTTGAAAGTCCTTCTCTTCGATaGGCTTTTTCACTTTTTCCACATCCAGCTCTTCTATCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SADHMHTAFESPSLR*AFSLFPHPALLSCS
Trigger: ACTACAGGATAGAAGAGCTGGATGTGGAAAAAGTGAAAAAGCTCATCGAAGAGAAGGACTTTCAAATGCTGTATGCATATGATCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAATGGATTTATTCTGTCTaGGTTGCAAGCTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SCYQVASHNYLKASLELKWIYSV*VASFLV
Trigger: AACCAGAAAGCTTGCAACCAAGACAGAATAAATCCA...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TCTTGCTACCAAGTGGCCTCACATAATTATCTTAAGGCATCTCTTGAGCTGAAAGATGTGATTTCACAATaGTATCTCGCAGTCCAAACT +
Preference number: 5 (lower is better)
Translates to: SCYQVASHNYLKASLELKDVISQ*YLAVQT
Trigger: AGTTTGGACTGCGAGATACAATTGTGAAATCACATC...TTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS-3UTR CAA 90 bp TTGAATGTCAGTTTTATTATGGTGGATTTTCTCCCGTGTCTTCACGACTCACAGGGATTCTACTTTCAATaGCATGTACTTCACATTCTG +
Preference number: 5 (lower is better)
Translates to: LNVSFIMVDFLPCLHDSQGFYFQ*HVLHIL
Trigger: CAGAATGTGAAGTACATGCAATTGAAAGTAGAATCC...CTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS GCA 72 bp AGCTCCCCAGCCCAGCTTCCCGCCGCCCGCCGAACCTaGAGTGTTGCGCTCCCGAGAGCCGGCGGCGGCAGA +
Preference number: 6 (lower is better)
Translates to: SSPAQLPAARRT*SVALPRAGGGR
Trigger: TCTGCCGCCGCCGGCTCTCGGGAGCGCAACACTGCAGGTTCGGCGGGCGGCGGGAAGCTGGGCTGGGGAGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS CAA 90 bp CCAGCTCCCCAGCCCAGCTTCCCGCCGCCCGCCGAACCTGCAGTGTaGCGCTCCCGAGAGCCGGCGGCGGCAGACATTTCCCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: PAPQPSFPPPAEPAV*RSREPAAADISLPA
Trigger: AGCAGGCAGGGAAATGTCTGCCGCCGCCGGCTCTCGGGAGCGCAACACTGCAGGTTCGGCGGGCGGCGGGAAGCTGGGCTGGGGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS CCA 72 bp GCCACCAGGACTTTGGTCTTCGCCCCGAGCGTCCACTaGCCAAACCGCCGACCCTGCCCACCCGAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: ATRTLVFAPSVH*PNRRPCPPEGR
Trigger: CCGGCCCTCGGGTGGGCAGGGTCGGCGGTTTGGCCAGTGGACGCTCGGGGCGAAGACCAAAGTCCTGGTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS GCA 72 bp CCGCGCGCTCCGCCCCCAGACGAACCCGCCCCCGTGTaGCCGCTCCATCAATCGAAAGCCTGTCTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: PRAPPPDEPAPV*PLHQSKACLLH
Trigger: ATGGAGAAGACAGGCTTTCGATTGATGGAGCGGGCACACGGGGGCGGGTTCGTCTGGGGGCGGAGCGCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373026.5
CDS CCA 72 bp CCCAGTGTCCCAGCCTCCAGAGGGCCACCAGGACTTTaGTCTTCGCCCCGAGCGTCCACTGGCCAAACCGCC +
Preference number: 6 (lower is better)
Translates to: PSVPASRGPPGL*SSPRASTGQTA
Trigger: GGCGGTTTGGCCAGTGGACGCTCGGGGCGAAGACCAAAGTCCTGGTGGCCCTCTGGAGGCTGGGACACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS CAA 72 bp CCCCAGTGTCCCAGCCTCCAGAGGGCCACCAGGACTTaGGTCTTCGCCCCGAGCGTCCACTGGCCAAACCGC +
Preference number: 6 (lower is better)
Translates to: PQCPSLQRATRT*VFAPSVHWPNR
Trigger: GCGGTTTGGCCAGTGGACGCTCGGGGCGAAGACCAAAGTCCTGGTGGCCCTCTGGAGGCTGGGACACTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS CAA 90 bp GAACTTCTGCCCCAGTGTCCCAGCCTCCAGAGGGCCACCAGGACTTaGGTCTTCGCCCCGAGCGTCCACTGGCCAAACCGCCGACCCTGC +
Preference number: 6 (lower is better)
Translates to: ELLPQCPSLQRATRT*VFAPSVHWPNRRPC
Trigger: GCAGGGTCGGCGGTTTGGCCAGTGGACGCTCGGGGCGAAGACCAAAGTCCTGGTGGCCCTCTGGAGGCTGGGACACTGGGGCAGAAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373021.1
CDS GCA 72 bp CAGCCAGCGTCTCCTGGATTGCCACAGACTGGTCCATaGTGGCCCCTGCTGAGCGCACACACCCTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: QPASPGLPQTGP*WPLLSAHTLLS
Trigger: GCTCAGGAGGGTGTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS CCA 72 bp TCCCCCTCAGCCAGCGTCTCCTGGATTGCCACAGACTaGTCCATGCTGGCCCCTGCTGAGCGCACACACCCT +
Preference number: 6 (lower is better)
Translates to: SPSASVSWIATD*SMLAPAERTHP
Trigger: AGGGTGTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS CCA 72 bp CCAGCGTCTCCTGGATTGCCACAGACTGGTCCATGCTaGCCCCTGCTGAGCGCACACACCCTCCTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: PASPGLPQTGPC*PLLSAHTLLSC
Trigger: ACAGCTCAGGAGGGTGTGTGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS CCA 72 bp GCGATGACGCAGTATTCCCCCTCAGCCAGCGTCTCCTaGATTGCCACAGACTGGTCCATGCTGGCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: AMTQYSPSASVS*IATDWSMLAPA
Trigger: AGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAATACTGCGTCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000458109.6
ENST00000491406.2
CDS GCA 72 bp ACAACCGCGCGGCGTTGGCATCTCCAGCTCCAGCTCTaGGCACCTATACCGAGACAGCCACAGGAATTCAGG +
Preference number: 6 (lower is better)
Translates to: TTARRWHLQLQL*APIPRQPQEFR
Trigger: CCTGAATTCCTGTGGCTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS GCA 72 bp ACCCTACACAATAGACATCTGGGGCCTGGATACCATTaGTCAGCCACAGCCGGAGGCATTCTTTGGGGGACT +
Preference number: 6 (lower is better)
Translates to: TLHNRHLGPGYH*SATAGGILWGT
Trigger: AGTCCCCCAAAGAATGCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000467066.1
CDS CCA 72 bp TCTTCCAGCGTAAAATCCCGCGAGACTGGCACTATCTaGTCCAGAGAGACATCGTCCCCGGTAATGGCCATC +
Preference number: 6 (lower is better)
Translates to: SSSVKSRETGTI*SRETSSPVMAI
Trigger: GATGGCCATTACCGGGGACGATGTCTCTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTTACGCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
ENST00000491406.2
CDS CCA 72 bp CTGGACAGGCCCTGGCAACTTCGTGGAGGAACATCCTaGTTTGTGAACCAAAGGGCAGTTGGAATACGAGGC +
Preference number: 6 (lower is better)
Translates to: LDRPWQLRGGTS*FVNQRAVGIRG
Trigger: GCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS CCA 72 bp GCAGAATCGAAGCCTGGACAGGCCCTGGCAACTTCGTaGAGGAACATCCTGGTTTGTGAACCAAAGGGCAGT +
Preference number: 6 (lower is better)
Translates to: AESKPGQALATS*RNILVCEPKGS
Trigger: ACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGCTTCGATTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS CCA 72 bp CAGATCAAGCTCCTGGAACCCTACACAATAGACATCTaGGGCCTGGATACCATTGCTCAGCCACAGCCGGAG +
Preference number: 6 (lower is better)
Translates to: QIKLLEPYTIDI*GLDTIAQPQPE
Trigger: CTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTAGGGTTCCAGGAGCTTGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000467066.1
CDS TCA 72 bp GGCCCTGGCAACTTCGTGGAGGAACATCCTGGTTTGTaGACCAAAGGGCAGTTGGAATACGAGGCTAAGCTC +
Preference number: 6 (lower is better)
Translates to: GPGNFVEEHPGL*TKGQLEYEAKL
Trigger: GAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS CCA 72 bp TGGAGGAACATCCTGGTTTGTGAACCAAAGGGCAGTTaGAATACGAGGCTAAGCTCTGCTGTGTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: WRNILVCEPKGS*NTRLSSAVSSW
Trigger: CCAGCTGGACACAGCAGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373021.1
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000458109.6
CDS CCA 72 bp CAGAGCTCTTTGGGGATTTCCATGGGGCTATCCAACTaGCTCCCATCATCTCCAGTCCATACTGGCATCAGA +
Preference number: 6 (lower is better)
Translates to: QSSLGISMGLSN*LPSSPVHTGIR
Trigger: TCTGATGCCAGTATGGACTGGAGATGATGGGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000470364.5
ENST00000474758.1
CDS CAA 72 bp TGGATACCATTGCTCAGCCACAGCCGGAGGCATTCTTaGGGGGACTGCCCATTTACATTGTATGTTCCCGCA +
Preference number: 6 (lower is better)
Translates to: WIPLLSHSRRHS*GDCPFTLYVPA
Trigger: TGCGGGAACATACAATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCTGTGGCTGAGCAATGGTATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000467066.1
CDS TCA 72 bp TCTTCAGGGCCATGTGGCTCTGGTAACTCAGCTGAGTaGTGTTCTTCCCTTTCCAGAGAATCCGATCACACC +
Preference number: 6 (lower is better)
Translates to: SSGPCGSGNSAE*CSSLSRESDHT
Trigger: GGTGTGATCGGATTCTCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACCAGAGCCACATGGCCCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS TCA 72 bp TGCAGCAATAGGAAACCACCACCAGGCATCTCCCCATaGAAAGACAGAGCCCACAACTCTATGTACTCATGG +
Preference number: 6 (lower is better)
Translates to: CSNRKPPPGISP*KDRAHNSMYSW
Trigger: CCATGAGTACATAGAGTTGTGGGCTCTGTCTTTTCATGGGGAGATGCCTGGTGGTGGTTTCCTATTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467066.1
CDS TCA 72 bp AATGGAGATGCAAACAGTGATAACCTCATAGAGCTGTaGGAAAAGCCTGATTTAGGCCCGGTGCGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: NGDANSDNLIEL*EKPDLGPVRWL
Trigger: GAGCCACCGCACCGGGCCTAAATCAGGCTTTTCTCACAGCTCTATGAGGTTATCACTGTTTGCATCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491406.2
CDS CCA 72 bp GCTATCCAACTGGCTCCCATCATCTCCAGTCCATACTaGCATCAGAGTCAGCTCACTAATGGTTTCAAGTGG +
Preference number: 6 (lower is better)
Translates to: AIQLAPIISSPY*HQSQLTNGFKW
Trigger: CCACTTGAAACCATTAGTGAGCTGACTCTGATGCCAGTATGGACTGGAGATGATGGGAGCCAGTTGGATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000474758.1
CDS CCA 72 bp TTCGGTACAGGTAATCAACCATCATCCAGAGCTCTTTaGGGATTTCCATGGGGCTATCCAACTGGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: FGTGNQPSSRAL*GFPWGYPTGSH
Trigger: ATGGGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTTGATTACCTGTACCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000470364.5
ENST00000474758.1
CDS CAA 72 bp TTGCAAGCTTTCTGGTTTATCTTGACCCCTGGAGCTTaGGTCCATAGGCACTCCCTTCCCATTTGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: LQAFWFILTPGA*VHRHSLPIWSQ
Trigger: TTGAGACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGCTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CAA 72 bp CCCCTGTCCAAGTGCAGAACCAGAATGTCCTCAATTTaGTCTTCACCCGAGTTGAGCTTTGTAGCTGTCATC +
Preference number: 6 (lower is better)
Translates to: PLSKCRTRMSSI*SSPELSFVAVI
Trigger: GATGACAGCTACAAAGCTCAACTCGGGTGAAGACAAAATTGAGGACATTCTGGTTCTGCACTTGGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000474758.1
CDS CAA 90 bp CTGTCTTGGTTGCAAGCTTTCTGGTTTATCTTGACCCCTGGAGCTTaGGTCCATAGGCACTCCCTTCCCATTTGGTCTCAAACCATCAAA +
Preference number: 6 (lower is better)
Translates to: LSWLQAFWFILTPGA*VHRHSLPIWSQTIK
Trigger: TTTGATGGTTTGAGACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CAA 90 bp GGACTTGGATTTATTCTGTCTTGGTTGCAAGCTTTCTGGTTTATCTaGACCCCTGGAGCTTTGGTCCATAGGCACTCCCTTCCCATTTGG +
Preference number: 6 (lower is better)
Translates to: GLGFILSWLQAFWFI*TPGALVHRHSLPIW
Trigger: CCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCAAGACAGAATAAATCCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS TCA 72 bp ATTTGGCATCTGGATGAAGACCCTCTGACACAGCTTTaGACCACTCTTCCTCCTTTGGGGTATCGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: IWHLDEDPLTQL*TTLPPLGYRER
Trigger: TCTTTCACGATACCCCAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000467066.1
CDS TCA 72 bp TCCAGTATCCAAGCAGTCCCTGATATGTTCAAATTCTaGCCTCAGGCCTGGTTGCTGAAACAGATCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SSIQAVPDMFKF*PQAWLLKQIFL
Trigger: CAGGAAGATCTGTTTCAGCAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000470364.5
CDS GCA 72 bp GAGCTCACCCTCTGTGAAGCCTTCAAAGACAGTCTTTaGGGCCACCTGAATTTTCAGCTGATCATATGCATA +
Preference number: 6 (lower is better)
Translates to: ELTLCEAFKDSL*GHLNFQLIICI
Trigger: TATGCATATGATCAGCTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAGGCTTCACAGAGGGTGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CAA 72 bp CAGAACTCTCGCTTGGACAGGGACACAGAAGGAATGTaGGCATTTTCCATCTTATCCAGGGAGCGAACAATT +
Preference number: 6 (lower is better)
Translates to: QNSRLDRDTEGM*AFSILSRERTI
Trigger: AATTGTTCGCTCCCTGGATAAGATGGAAAATGCCAACATTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CCA 72 bp GGACTTGGATTTATTCTGTCTTGGTTGCAAGCTTTCTaGTTTATCTTGACCCCTGGAGCTTTGGTCCATAGG +
Preference number: 6 (lower is better)
Translates to: GLGFILSWLQAF*FILTPGALVHR
Trigger: CCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCAAGACAGAATAAATCCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CCA 72 bp AGAACTCTCGCTTGGACAGGGACACAGAAGGAATGTTaGCATTTTCCATCTTATCCAGGGAGCGAACAATTT +
Preference number: 6 (lower is better)
Translates to: RTLAWTGTQKEC*HFPSYPGSEQF
Trigger: AAATTGTTCGCTCCCTGGATAAGATGGAAAATGCCAACATTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS TCA 72 bp AGAGGTTATCAATCATTCCAGTATCCAAGCAGTCCCTaGTATGTTCAAATTCTGACCTCAGGCCTGGTTGCT +
Preference number: 6 (lower is better)
Translates to: RGYQSFQYPSSP*YVQILTSGLVA
Trigger: AGCAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATACTGGAATGATTGATAACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000470364.5
CDS GCA 72 bp CCTACTATAGTCCAAGAACTGTATACACGATCCAAGTaGACGAGAAAGACTGTGCACAGAAAACTGGTTGCT +
Preference number: 6 (lower is better)
Translates to: PTIVQELYTRSK*TRKTVHRKLVA
Trigger: AGCAACCAGTTTTCTGTGCACAGTCTTTCTCGTGCACTTGGATCGTGTATACAGTTCTTGGACTATAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487328.1
CDS CAA 90 bp TCCAAGTGCAGAACCAGAATGTCCTCAATTTTGTCTTCACCCGAGTaGAGCTTTGTAGCTGTCATCTTATTTACGAAGAGCTCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: SKCRTRMSSILSSPE*SFVAVILFTKSSKS
Trigger: TGACTTGGAGCTCTTCGTAAATAAGATGACAGCTACAAAGCTCAACTCGGGTGAAGACAAAATTGAGGACATTCTGGTTCTGCACTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000474758.1
CDS CAA 72 bp ATAGTGGAGGAGCGAACCATGTCAGTAATTTCGGACTaGGATTTATTCTGTCTTGGTTGCAAGCTTTCTGGT +
Preference number: 6 (lower is better)
Translates to: IVEERTMSVISD*DLFCLGCKLSG
Trigger: ACCAGAAAGCTTGCAACCAAGACAGAATAAATCCAAGTCCGAAATTACTGACATGGTTCGCTCCTCCACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
CDS CAA 90 bp AAGGAAAGAAAAGGTATCAGCCAACCAACAAGCATCCAAATGTGCTaGGCATGCAGGAGACACAAGAACAAAGAGTTTATAGTCCAACTG +
Preference number: 6 (lower is better)
Translates to: KERKGISQPTSIQMC*ACRRHKNKEFIVQL
Trigger: CAGTTGGACTATAAACTCTTTGTTCTTGTGTCTCCTGCATGCCAAGCACATTTGGATGCTTGTTGGTTGGCTGATACCTTTTCTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474758.1
CDS CAA 72 bp AGAACCAGAATGTCCTCAATTTTGTCTTCACCCGAGTaGAGCTTTGTAGCTGTCATCTTATTTACGAAGAGC +
Preference number: 6 (lower is better)
Translates to: RTRMSSILSSPE*SFVAVILFTKS
Trigger: GCTCTTCGTAAATAAGATGACAGCTACAAAGCTCAACTCGGGTGAAGACAAAATTGAGGACATTCTGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6
ENST00000474758.1
CDS CAA 90 bp ACAGGGTACTTGTCCATTATGAATTGTAAAGGATTCTACTTTCAATaGCATGTACTTCACATTCTGAAAACAGAACTCTCGCTTGGACAG +
Preference number: 6 (lower is better)
Translates to: TGYLSIMNCKGFYFQ*HVLHILKTELSLGQ
Trigger: CTGTCCAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACATGCAATTGAAAGTAGAATCCTTTACAATTCATAATGGACAAGTACCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373023.6
ENST00000373024.8
ENST00000373026.5
ENST00000373027.5
ENST00000458109.6