RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INO80E (Homo sapiens)

Ensembl gene IDs: ENSG00000169592

Ensembl transcript IDs: ENST00000304516.11, ENST00000380503.7, ENST00000540562.1, ENST00000562291.2, ENST00000562441.5, ENST00000563040.5, ENST00000563197.6, ENST00000567065.5, ENST00000567254.5, ENST00000567705.5, ENST00000567987.5, ENST00000568043.5, ENST00000569957.5, ENST00000620599.4

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCCAGATCCAGCTCCTCCGCACGGCAGCCAGAGCGCGCGCTCTTaGGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: LPDPAPPHGSQSARS*VSGAGGAVSPAWAS
Trigger: TGAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGGCTGCCGTGCGGAGGAGCTGGATCTGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562441.5
3UTR GCA 90 bp CAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGC +
Preference number: 1 (lower is better)
Translates to: QLGINKHLRGSWTRV*WHGEGAGRGRGGHG
Trigger: GCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR CCA 90 bp CTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTG +
Preference number: 1 (lower is better)
Translates to: LGINKHLRGSWTRVC*HGEGAGRGRGGHGV
Trigger: CACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR CCA 90 bp CCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGCTCCAGAACCCTaGGAGCCGCCCAGTTGGTCCCCACTCCGCTCTGCCCCTCAGCCC +
Preference number: 1 (lower is better)
Translates to: PPQMRPLILLLAPEP*EPPSWSPLRSAPQP
Trigger: GGGCTGAGGGGCAGAGCGGAGTGGGGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 90 bp GAGGGAGACTCCACTCGTGCTCAGACTAAAGCCCTGGAGGCATCCTaGCCTCTCTCCCGCACAGCCCACACCAGGTCCTCCAGGAACTCC +
Preference number: 1 (lower is better)
Translates to: EGDSTRAQTKALEAS*PLSRTAHTRSSRNS
Trigger: GGAGTTCCTGGAGGACCTGGTGTGGGCTGTGCGGGAGAGAGGCCAGGATGCCTCCAGGGCTTTAGTCTGAGCACGAGTGGAGTCTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 90 bp CCATCTCCAGGGAGGGAGACTCCACTCGTGCTCAGACTAAAGCCCTaGAGGCATCCTGGCCTCTCTCCCGCACAGCCCACACCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: PSPGRETPLVLRLKP*RHPGLSPAQPTPGP
Trigger: AGGACCTGGTGTGGGCTGTGCGGGAGAGAGGCCAGGATGCCTCCAGGGCTTTAGTCTGAGCACGAGTGGAGTCTCCCTCCCTGGAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 90 bp TCAGCCCATCCCCATCTCTCCCAAGGCTTGCATCTACCGCCAGCCTaGCGGCTTCCAAATGCGCAGCCCCTCACGGGCCGCTATCTAGCT +
Preference number: 1 (lower is better)
Translates to: SAHPHLSQGLHLPPA*RLPNAQPLTGRYLA
Trigger: AGCTAGATAGCGGCCCGTGAGGGGCTGCGCATTTGGAAGCCGCCAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATGGGGATGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR TCA 90 bp GCACAGCCCACACCAGGTCCTCCAGGAACTCCCATGCTCATTCTCTaGAATGGGTCCGCAGCTCCCTCTGGACCCTCTGCCCTTGGCCTG +
Preference number: 1 (lower is better)
Translates to: AQPTPGPPGTPMLIL*NGSAAPSGPSALGL
Trigger: CAGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCGGACCCATTTCAGAGAATGAGCATGGGAGTTCCTGGAGGACCTGGTGTGGGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 90 bp GCCTCTCTCCCGCACAGCCCACACCAGGTCCTCCAGGAACTCCCATaGTCATTCTCTGAAATGGGTCCGCAGCTCCCTCTGGACCCTCTG +
Preference number: 1 (lower is better)
Translates to: ASLPHSPHQVLQELP*SFSEMGPQLPLDPL
Trigger: CAGAGGGTCCAGAGGGAGCTGCGGACCCATTTCAGAGAATGAGCATGGGAGTTCCTGGAGGACCTGGTGTGGGCTGTGCGGGAGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 90 bp TCCTGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTaGCTCCAGAACCCTGGGAGCCGCCCAGTTGGTCCCCACTCCGCT +
Preference number: 1 (lower is better)
Translates to: SCTPDHRKCGLSFCF*LQNPGSRPVGPHSA
Trigger: AGCGGAGTGGGGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 90 bp TCCAGATCCTGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTaGTTCTGGCTCCAGAACCCTGGGAGCCGCCCAGTTGGTCCCCAC +
Preference number: 1 (lower is better)
Translates to: SRSCTPDHRKCGLSF*FWLQNPGSRPVGPH
Trigger: GTGGGGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACAGGATCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 90 bp AGCTCCTCCGCACGGCAGCCAGAGCGCGCGCTATTCTCCGCACAATaGCGCCACTGCTTCTGTCTTCACAGCTATCCTTCCTCTGCTTGG +
Preference number: 1 (lower is better)
Translates to: SSSARQPERALFSAQ*RHCFCLHSYPSSAW
Trigger: CCAAGCAGAGGAAGGATAGCTGTGAAGACAGAAGCAGTGGCGGCATTGTGCGGAGAATAGCGCGCGCTCTGGCTGCCGTGCGGAGGAGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 90 bp GATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCGAGGGACCGTGCTCAGGATCGTGGG +
Preference number: 1 (lower is better)
Translates to: DHQVIVSIQGIVPAT*IAEHLPRDRAQDRG
Trigger: CCCACGATCCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGGAGACGATGACCTGGTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR TCA 90 bp CAGCCCCTCACGGGCCGCTATCTAGCTGCCTTTCCAGATGGCATCTaGCACATCCGCGGCCAGACTCAGTTTTCCTCCAAGCCTGTGGTC +
Preference number: 1 (lower is better)
Translates to: QPLTGRYLAAFPDGI*HIRGQTQFSSKPVV
Trigger: GACCACAGGCTTGGAGGAAAACTGAGTCTGGCCGCGGATGTGTCAGATGCCATCTGGAAAGGCAGCTAGATAGCGGCCCGTGAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR TCA 90 bp CCCTTCAGGGACTCCCGCTCCCCTCTGCTTCTCAGGCTCAAGAGGTaGAGCCTCACAGGGCCAAGGTCACACGGAGAAAACGGCAGAGTT +
Preference number: 1 (lower is better)
Translates to: PFRDSRSPLLLRLKR*SLTGPRSHGENGRV
Trigger: AACTCTGCCGTTTTCTCCGTGTGACCTTGGCCCTGTGAGGCTTCACCTCTTGAGCCTGAGAAGCAGAGGGGAGCGGGAGTCCCTGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 90 bp CCTGCCACCCTCCTGGGGGACACCCGTGCATGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAAC +
Preference number: 1 (lower is better)
Translates to: PATLLGDTRACLRLF*LCQWPEHGSWASIN
Trigger: GTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGGAGGGTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR CCA 90 bp CTGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTaGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAA +
Preference number: 1 (lower is better)
Translates to: LGDTRACLRLFWLCQ*PEHGSWASINTSEE
Trigger: TTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR CCA 90 bp CCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATaGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGT +
Preference number: 1 (lower is better)
Translates to: PCMFTPFLVVSVAGA*QLGINKHLRGSWTR
Trigger: ACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR CCA 90 bp TGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTaGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCT +
Preference number: 1 (lower is better)
Translates to: CLRLFWLCQWPEHGS*ASINTSEEAGLVCA
Trigger: AGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR CCA 90 bp CCCAGCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCGGGCGGGAGCGGGGATaGAGATGGGAGGCGGAATGG +
Preference number: 2 (lower is better)
Translates to: PSPRTPAREGQRPSHRAVGRERG*RWEAEW
Trigger: CCATTCCGCCTCCCATCTCCATCCCCGCTCCCGCCC...GACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567065.5
3UTR-3UTR CCA 90 bp TCCTCCGCACGGCAGCCAGAGCGCGCGCTCTTGAGTTTCCGGGGCAGGCGGGGCAGATGGGAGGCGGAATaGACCGGGGTGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SSARQPERALLSFRGRRGRWEAE*TGVRVG
Trigger: CCCCACCCTCACCCCGGTCCATTCCGCCTCCCATCT...GCCCCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGGCTGCCGTGCGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562441.5
3UTR-3UTR CCA 90 bp CCCAGCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCAGATGGGAGGCGGAATaGACCGGGGTGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PSPRTPAREGQRPSHRAVRWEAE*TGVRVG
Trigger: CCCCACCCTCACCCCGGTCCATTCCGCCTCCCATCT...GACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567065.5
3UTR-3UTR CCA 90 bp TCCTCCGCACGGCAGCCAGAGCGCGCGCTCTTGAGTTTCCGGGGCAGGCGGGGCGAGCGGGGATGGAGATaGGAGGCGGAATGGACCGGG +
Preference number: 2 (lower is better)
Translates to: SSARQPERALLSFRGRRGERGWR*EAEWTG
Trigger: CCCGGTCCATTCCGCCTCCCATCTCCATCCCCGCTC...GCCCCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGGCTGCCGTGCGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562441.5
3UTR CAA 90 bp TCTCCCAGATCCAGCTCCTCCGCACGGCAGCCAGAGCGCGCGCTCTaGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: SPRSSSSARQPERAL*SFRGRRGRFSRLGL
Trigger: GAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGGCTGCCGTGCGGAGGAGCTGGATCTGGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562441.5
3UTR-3UTR GCA 90 bp AAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 2 (lower is better)
Translates to: KHLRGSWTRVCWHGEGAGSWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp GCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTCAGGGGGCGGGAGCGGGGATaGAGATGGGAGGCGGAATGG +
Preference number: 2 (lower is better)
Translates to: AILSFRGRRGRFSRLGLRGRERG*RWEAEW
Trigger: CCATTCCGCCTCCCATCTCCATCCCCGCTCCCGCCC...CCTGAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567065.5
3UTR-3UTR CCA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGGAGCGGGGATGGAGATaGGAGGCGGAATGGACCGGG +
Preference number: 2 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGERGWR*EAEWTG
Trigger: CCCGGTCCATTCCGCCTCCCATCTCCATCCCCGCTC...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000567065.5
3UTR-3UTR CCA 90 bp CCATCCAAGGCATCGTCCCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGG +
Preference number: 2 (lower is better)
Translates to: PSKASSPLPASLNICRGTWTRVC*HGEGAG
Trigger: CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCA...GGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp GCGCTCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTCAGGCACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: ALLSFRGRRGRFSRLGLRHLRGS*TRVCWH
Trigger: GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTG...CCTGAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562441.5
3UTR-3UTR GCA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCGGGCAGCAGCAGGATaGTGTCCTGGGCTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGRAAAG*CPGLCS
Trigger: AGAGCAAAGCCCAGGACAGCATCCTGCTGCTGCCCG...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567065.5
3UTR-3UTR CCA 90 bp GGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCCGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 2 (lower is better)
Translates to: GSWASINTSEEAGLVCAGRRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...GCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp CCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTCTGCCTCCCCCGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 2 (lower is better)
Translates to: PCTAALLKRWPLQGLCLPRRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...GGGGAGGCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR CCA 90 bp TCCCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCGTGCTCAGGATCGTGGCCCTGGAGGCATCCTaGCCTCTCTCCCGCACAGCC +
Preference number: 2 (lower is better)
Translates to: SPLPASLNICRGTVLRIVALEAS*PLSRTA
Trigger: GGCTGTGCGGGAGAGAGGCCAGGATGCCTCCAGGGC...CACGATCCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR GCA 90 bp CTGCCCCTCAGCCCATCCCCATCTCTCCCAAGGCTTGCATCTACCGCCAGCCTGCCATTGCAGGGTCTCTaGCTCCCCAGCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LPLSPSPSLPRLASTASLPLQGL*LPSRWQ
Trigger: CTGCCACCTGCTGGGGAGGCAGAGACCCTGCAATGG...CAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATGGGGATGGGCTGAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CCA 90 bp GGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGCGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 2 (lower is better)
Translates to: GAWQLGINKHLRGSWTRVRRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...CACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp TGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCGGGCCCCTGCCACCCTCCTaGGGGACACCCGTGCATGTT +
Preference number: 2 (lower is better)
Translates to: WQMLPATRLNNCPLEGAGPLPPS*GTPVHV
Trigger: AACATGCACGGGTGTCCCCCAGGAGGGTGGCAGGGG...CCCGGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR GCA 90 bp TGGCATCTGACACATCCGCGGCCAGACTCAGTTTTCCTCCAAGCCTGTGGTCCCAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 2 (lower is better)
Translates to: WHLTHPRPDSVFLQACGPSWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...GGGACCACAGGCTTGGAGGAAAACTGAGTCTGGCCGCGGATGTGTCAGATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR GCA 90 bp AAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCCTGGGGGACACCCGTaGATGTTTACGCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: KHLRGSWTRVCWHGEGAGPGGHP*MFTPFL
Trigger: CAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGG...CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR GCA 90 bp GTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCCCCTGGCGGCTTCCAAATaGGCAGCCCCTCACGGGCCG +
Preference number: 2 (lower is better)
Translates to: VTPGCRSPGHRLHPRHRPLAASK*AAPHGP
Trigger: CGGCCCGTGAGGGGCTGCGCATTTGGAAGCCGCCAG...GGGACGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CCA 90 bp TTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAACGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 2 (lower is better)
Translates to: LCQWPEHGSWASINTSEERRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...TTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR GCA 90 bp ACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 2 (lower is better)
Translates to: TRACLRLFWLCQWPEHGSSWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...GCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR GCA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 2 (lower is better)
Translates to: CQWPEHGSWASINTSEEASWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR TCA 90 bp CCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCGTGCTCAGGATCGTGGGTTTCCAGATGGCATCTaGCACATCCGCGGCCAGACT +
Preference number: 2 (lower is better)
Translates to: PATCIAEHLPRDRAQDRGFPDGI*HIRGQT
Trigger: AGTCTGGCCGCGGATGTGTCAGATGCCATCTGGAAA...CCCACGATCCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR GCA 90 bp TTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 2 (lower is better)
Translates to: FWLCQWPEHGSWASINTSSWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp CACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGGTCCGCAGCTCCCTCTaGACCCTCTGCCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: HPCMFTPFLVVSVAGAWQVRSSL*TLCPWP
Trigger: AGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCGGAC...CTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CCA 90 bp CCATCCAAGGCATCGTCCCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCTTTCCTCCAAGCCTGTaGTCCCACAGCCCTCCCATC +
Preference number: 2 (lower is better)
Translates to: PSKASSPLPASLNICRGTFPPSL*SHSPPI
Trigger: GATGGGAGGGCTGTGGGACCACAGGCTTGGAGGAAA...GGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CCA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTCTGGCTCCAGAACCCTaGGAGCCGCCCAGTTGGTCC +
Preference number: 2 (lower is better)
Translates to: CQWPEHGSWASINTSEEALAPEP*EPPSWS
Trigger: GGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAG...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR GCA 90 bp CCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGCCATTGCAGGGTCTCTaGCTCCCCAGCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: PCMFTPFLVVSVAGAWQLPLQGL*LPSRWQ
Trigger: CTGCCACCTGCTGGGGAGGCAGAGACCCTGCAATGG...CAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR CCA 90 bp GTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCCCCACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: VTPGCRSPGHRLHPRHRPHLRGS*TRVCWH
Trigger: GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTG...GGGACGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp AGGTGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCTTCTGGTTGTGTCAGTaGCCGGAGCATGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: RWQMLPATRLNNCPLEGAFWLCQ*PEHGSW
Trigger: CCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA...GGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR CAA 90 bp GCCACCCTCCTGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACC +
Preference number: 2 (lower is better)
Translates to: ATLLGDTRACLRLFW*CQWPEHGSWASINT
Trigger: GGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGGAGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR GCA 90 bp GCCACCCTCCTGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCG +
Preference number: 2 (lower is better)
Translates to: ATLLGDTRACLRLFWLCQIVPAT*IAEHLP
Trigger: CGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGAT...CTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGGAGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp TGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCGGGTCAGTGGCCGGAGCATaGCAGCTGGGCATCAATAAA +
Preference number: 2 (lower is better)
Translates to: WQMLPATRLNNCPLEGAGSVAGA*QLGINK
Trigger: TTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGA...CCCGGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR CCA 90 bp TCCAGATCCTGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGCATCTACCGCCAGCCTaGCGGCTTCCAAATGCGCAG +
Preference number: 2 (lower is better)
Translates to: SRSCTPDHRKCGLSFCFWHLPPA*RLPNAQ
Trigger: CTGCGCATTTGGAAGCCGCCAGGCTGGCGGTAGATG...CCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACAGGATCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR GCA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTCCTGGGGGACACCCGTaGATGTTTACGCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: CQWPEHGSWASINTSEEAPGGHP*MFTPFL
Trigger: CAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGG...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR GCA 90 bp ACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGCTCCAGAACCCTCCTGGGGGACACCCGTaGATGTTTACGCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: TPDHRKCGLSFCFWLQNPPGGHP*MFTPFL
Trigger: CAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGG...AGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR GCA 90 bp TTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATACGGGCAGCAGCAGGATaGTGTCCTGGGCTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: LRLFWLCQWPEHGSWASIRAAAG*CPGLCS
Trigger: AGAGCAAAGCCCAGGACAGCATCCTGCTGCTGCCCG...TATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562441.5
3UTR-3UTR CCA 90 bp TTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCCCGGAGCATGGCAGCTaGGCATCAATAAACACCTCC +
Preference number: 2 (lower is better)
Translates to: FWLCQWPEHGSWASINTSPEHGS*ASINTS
Trigger: GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG...GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp CGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCTGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAG +
Preference number: 2 (lower is better)
Translates to: RSLRDVDHQVIVSIQGIVCLRLF*LCQWPE
Trigger: CTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA...GACGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp CCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTCTGCCTCCCCTGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAG +
Preference number: 2 (lower is better)
Translates to: PCTAALLKRWPLQGLCLPCLRLF*LCQWPE
Trigger: CTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA...GGGGAGGCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR GCA 90 bp AAAAACCTAGCCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTTCCCTCTGGACCCTCTaGCCTTGGCCTGGTTTACCG +
Preference number: 2 (lower is better)
Translates to: KNLALYSCPFKEVAIAGSSLWTL*PWPGLP
Trigger: CGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGA...AGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CCA 90 bp TTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCTCAGTGGCCGGAGCATaGCAGCTGGGCATCAATAAA +
Preference number: 2 (lower is better)
Translates to: FWLCQWPEHGSWASINTSSVAGA*QLGINK
Trigger: TTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGA...GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR CCA 90 bp TTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATACTCAGACTAAAGCCCTaGAGGCATCCTGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: LRLFWLCQWPEHGSWASILRLKP*RHPGLS
Trigger: AGAGAGGCCAGGATGCCTCCAGGGCTTTAGTCTGAG...TATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CCA 90 bp TGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCATGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAG +
Preference number: 2 (lower is better)
Translates to: CLRLFWLCQWPEHGSWASCLRLF*LCQWPE
Trigger: CTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA...TGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR-3UTR CAA 90 bp GCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCGGGGGGTCCCACCGCCATCTaGAGTTTCCGGGGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: APEPRPGKVSGPPTGQSGGPTAI*SFRGRR
Trigger: CCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGACC...CCCCGACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000567065.5
3UTR TCA 72 bp GGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTaGTGTCACGGTCACTCCGGGATGTCGATCACCAGG +
Preference number: 3 (lower is better)
Translates to: GRAPGGAVVGMA*CHGHSGMSITR
Trigger: CCTGGTGATCGACATCCCGGAGTGACCGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR TCA 72 bp CCAGCTCCTCCGCACGGCAGCCAGAGCGCGCGCTCTTaGGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCT +
Preference number: 3 (lower is better)
Translates to: PAPPHGSQSARS*VSGAGGAVSPA
Trigger: AGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGGCTGCCGTGCGGAGGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562441.5
3UTR CCA 72 bp GCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATaGCGTGATGTCACGGTCACTCCGGGATGTCGATCA +
Preference number: 3 (lower is better)
Translates to: ARGGRRAGPWWA*RDVTVTPGCRS
Trigger: TGATCGACATCCCGGAGTGACCGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR CCA 72 bp AATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: NKHLRGSWTRVC*HGEGAGRGRGG
Trigger: CCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR GCA 72 bp TCTGGGCTGCGGTCCCAGCCTCCTAACTGGACTCCCTaGCCGCAGCCTCTCCCAGATCCAGCTCCTCCGCAC +
Preference number: 3 (lower is better)
Translates to: SGLRSQPPNWTP*PQPLPDPAPPH
Trigger: GTGCGGAGGAGCTGGATCTGGGAGAGGCTGCGGGCAGGGAGTCCAGTTAGGAGGCTGGGACCGCAGCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR CCA 72 bp CCCCATCTCTCCCAAGGCTTGCATCTACCGCCAGCCTaGCGGCTTCCAAATGCGCAGCCCCTCACGGGCCGC +
Preference number: 3 (lower is better)
Translates to: PHLSQGLHLPPA*RLPNAQPLTGR
Trigger: GCGGCCCGTGAGGGGCTGCGCATTTGGAAGCCGCCAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 72 bp ATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGT +
Preference number: 3 (lower is better)
Translates to: INKHLRGSWTRV*WHGEGAGRGRG
Trigger: ACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR-3UTR CAA 90 bp AAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCATCTCTCCCAAGGCTaGCATCTACCGCCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: KHLRGSWTRVCWHGEGAGHLSQG*HLPPAW
Trigger: CCAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATG...CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 72 bp TGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGG +
Preference number: 3 (lower is better)
Translates to: WQLGINKHLRGS*TRVCWHGEGAG
Trigger: CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
3UTR CCA 72 bp ATGCGGCCTCTCATTCTGCTTCTGGCTCCAGAACCCTaGGAGCCGCCCAGTTGGTCCCCACTCCGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: MRPLILLLAPEP*EPPSWSPLRSA
Trigger: GGCAGAGCGGAGTGGGGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 72 bp TCCACTCGTGCTCAGACTAAAGCCCTGGAGGCATCCTaGCCTCTCTCCCGCACAGCCCACACCAGGTCCTCC +
Preference number: 3 (lower is better)
Translates to: STRAQTKALEAS*PLSRTAHTRSS
Trigger: GGAGGACCTGGTGTGGGCTGTGCGGGAGAGAGGCCAGGATGCCTCCAGGGCTTTAGTCTGAGCACGAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 72 bp CCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTaGCTCCAGAACCCTGGGAGCCGCCCAGTTGGTCCC +
Preference number: 3 (lower is better)
Translates to: PDHRKCGLSFCF*LQNPGSRPVGP
Trigger: GGGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CAA 90 bp GATCCTGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGCTCCCTGGGAGCCGCCCAGTaGGTCCCCACTCCGCTCTGC +
Preference number: 3 (lower is better)
Translates to: DPVLQTTANAASHSASGSLGAAQ*VPTPLC
Trigger: GCAGAGCGGAGTGGGGACCAACTGGGCGGCTCCCAG...GGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CAA 90 bp ATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCCCCGCTACCTGCATCGCTGCTGGACCCTCTGCCCTaGGCCTGGTTTACCGTGGTG +
Preference number: 3 (lower is better)
Translates to: ITRSSSPSKASSPLPASLLDPLP*AWFTVV
Trigger: CACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAG...CAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGGAGACGATGACCTGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 72 bp CCGCACAGCCCACACCAGGTCCTCCAGGAACTCCCATaGTCATTCTCTGAAATGGGTCCGCAGCTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: PHSPHQVLQELP*SFSEMGPQLPL
Trigger: CAGAGGGAGCTGCGGACCCATTTCAGAGAATGAGCATGGGAGTTCCTGGAGGACCTGGTGTGGGCTGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 72 bp TCCAAATGCGCAGCCCCTCACGGGCCGCTATCTAGCTaGCTTTCCAGATGGCATCTGACACATCCGCGGCCA +
Preference number: 3 (lower is better)
Translates to: SKCAAPHGPLSS*LSRWHLTHPRP
Trigger: TGGCCGCGGATGTGTCAGATGCCATCTGGAAAGGCAGCTAGATAGCGGCCCGTGAGGGGCTGCGCATTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 72 bp GCACGGCAGCCAGAGCGCGCGCTATTCTCCGCACAATaGCGCCACTGCTTCTGTCTTCACAGCTATCCTTCC +
Preference number: 3 (lower is better)
Translates to: ARQPERALFSAQ*RHCFCLHSYPS
Trigger: GGAAGGATAGCTGTGAAGACAGAAGCAGTGGCGGCATTGTGCGGAGAATAGCGCGCGCTCTGGCTGCCGTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 72 bp GTCATCGTCTCCATCCAAGGCATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCGAGGGACCGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: VIVSIQGIVPAT*IAEHLPRDRAQ
Trigger: CTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGGAGACGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR CCA 72 bp CTCCTGGGGGACACCCGTGCATGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: LLGDTRACLRLF*LCQWPEHGSWA
Trigger: TGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR TCA 72 bp GACTCCCGCTCCCCTCTGCTTCTCAGGCTCAAGAGGTaGAGCCTCACAGGGCCAAGGTCACACGGAGAAAAC +
Preference number: 3 (lower is better)
Translates to: DSRSPLLLRLKR*SLTGPRSHGEN
Trigger: GTTTTCTCCGTGTGACCTTGGCCCTGTGAGGCTTCACCTCTTGAGCCTGAGAAGCAGAGGGGAGCGGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR GCA 72 bp TGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTaGTTCTGGCTCCAGAACCCTGGGAGCCGCCCAGTT +
Preference number: 3 (lower is better)
Translates to: CTPDHRKCGLSF*FWLQNPGSRPV
Trigger: AACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CCA 72 bp CATGCTCATTCTCTGAAATGGGTCCGCAGCTCCCTCTaGACCCTCTGCCCTTGGCCTGGTTTACCGTGGTGG +
Preference number: 3 (lower is better)
Translates to: HAHSLKWVRSSL*TLCPWPGLPWW
Trigger: CCACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCGGACCCATTTCAGAGAATGAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR-3UTR CAA 90 bp TCCCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCGTGCTCAGGATCGTGTTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCAT +
Preference number: 3 (lower is better)
Translates to: SPLPASLNICRGTVLRIVLRLFW*CQWPEH
Trigger: ATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA...CACGATCCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
3UTR-3UTR CAA 90 bp GCCACCCTCCTGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCAT +
Preference number: 3 (lower is better)
Translates to: ATLLGDTRACLRLFWLCQLRLFW*CQWPEH
Trigger: ATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA...CTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGGAGGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
3UTR CCA 72 bp CTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTaGGCATCAATAAACACCTCCGAGGAAGCTGGACTC +
Preference number: 3 (lower is better)
Translates to: LFWLCQWPEHGS*ASINTSEEAGL
Trigger: GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp GCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCGGGGCGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 4 (lower is better)
Translates to: APEPRPGKVSGPPTGQSGRRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...CCCCGACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR TCA 90 bp TGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGGGTGGTGGGCATGGCGTaGTGTCACGGTCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: WHGEGAGRGRGGHGVMSRVVGMA*CHGHSG
Trigger: CCCGGAGTGACCGTGACATCACGCCATGCCCACCAC...CCGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCGGGGGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: APEPRPGKVSGPPTGQSGVAPRV*PPATPS
Trigger: GCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCAC...CCCCGACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000567065.5
ENST00000567987.5
CDS-3UTR CCA 90 bp GCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCGGGGGGGCGGGAGCGGGGATaGAGATGGGAGGCGGAATGG +
Preference number: 4 (lower is better)
Translates to: APEPRPGKVSGPPTGQSGGRERG*RWEAEW
Trigger: CCATTCCGCCTCCCATCTCCATCCCCGCTCCCGCCC...CCCCGACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGC
73% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567065.5
CDS-3UTR CCA 90 bp CTGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGCTGGCTCCAGAACCCTaGGAGCCGCCCAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LARGGRRAGPWWAWRDVTLAPEP*EPPSWS
Trigger: GGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAG...CGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGGGGGCCGTGGTGGGCATaGCGTGATGTCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: WHGEGAGRGRGGHGVMSRGPWWA*RDVTVT
Trigger: AGTGACCGTGACATCACGCCATGCCCACCACGGCCC...CCGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp AACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCCGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 4 (lower is better)
Translates to: NTSEEAGLVCAGTGRAPGRRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...GCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp GCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCGGGGAGATGGGAGGCGGAATaGACCGGGGTGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: APEPRPGKVSGPPTGQSGRWEAE*TGVRVG
Trigger: CCCCACCCTCACCCCGGTCCATTCCGCCTCCCATCT...CCCCGACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567065.5
3UTR CAA 72 bp TCCAGCTCCTCCGCACGGCAGCCAGAGCGCGCGCTCTaGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SSSSARQPERAL*SFRGRRGRFSR
Trigger: GCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGGCTGCCGTGCGGAGGAGCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR TCA 90 bp TGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGGCCTAGCTGTTGCCCGTaGCCAGTGAGAAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WHGEGAGRGRGGHGVMSRPSCCP*PVRKAA
Trigger: CGCTGCCTTTCTCACTGGTCACGGGCAACAGCTAGG...CCGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGTGGGCCTCAGGGGACTaGGCTCGGGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGWASGD*ARAAAG
Trigger: CCCTGCAGCTGCCCGAGCCCAGTCCCCTGAGGCCCA...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR TCA 90 bp AACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCGTGGTGGGCATGGCGTaGTGTCACGGTCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: NTSEEAGLVCAGTGRAPGVVGMA*CHGHSG
Trigger: CCCGGAGTGACCGTGACATCACGCCATGCCCACCAC...GCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp CTGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGGTTTCACCCAAAGGGTaGCGGCGCCGAATTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LARGGRRAGPWWAWRDVTVSPKG*RRRIGF
Trigger: GAAACCAATTCGGCGCCGGCACCCTTTGGGTGAAAC...CGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp CTGGACTCCCTGCCCGCAGCCTCTCCCAGATCCAGCTCCTCCGCACGGCAGCCAGTCCGCAGCTCCCTCTaGACCCTCTGCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LDSLPAASPRSSSSARQPVRSSL*TLCPWP
Trigger: AGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCGGAC...TGGCTGCCGTGCGGAGGAGCTGGATCTGGGAGAGGCTGCGGGCAGGGAGTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TTCTGGCTCCAGAACCCTGGGAGCCGCCCAGTTGGTCCCCACTCCGCTCTGCCCCAGCGAGCTCAGGTATaGGGAGGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FWLQNPGSRPVGPHSALPQRAQV*GGDPGG
Trigger: GCCTCCGGGGTCCCCTCCCCATACCTGAGCTCGCTG...GGGCAGAGCGGAGTGGGGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR TCA 90 bp GCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCGGGGTTTCCAGATGGCATCTaGCACATCCGCGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: APEPRPGKVSGPPTGQSGFPDGI*HIRGQT
Trigger: AGTCTGGCCGCGGATGTGTCAGATGCCATCTGGAAA...CCCCGACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp AACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCCCATTGCAGGGTCTCTaGCTCCCCAGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NTSEEAGLVCAGTGRAPGPLQGL*LPSRWQ
Trigger: CTGCCACCTGCTGGGGAGGCAGAGACCCTGCAATGG...GCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CTGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGTCAGTGGCCGGAGCATaGCAGCTGGGCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: LARGGRRAGPWWAWRDVTSVAGA*QLGINK
Trigger: TTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGA...CGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGTTCCGAGCTCAGGTATaGGGAGGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGFRAQV*GGDPGG
Trigger: GCCTCCGGGGTCCCCTCCCCATACCTGAGCTCGGAA...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR CCA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCTCCTCAGTCAGGCCTaGCCCCGTTCCGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGLLSQA*PRSELR
Trigger: CCTGAGCTCGGAACGGGGCCAGGCCTGACTGAGGAG...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR TCA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGGGGACCCCGGAGGCCTaGAGGGGAAACCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGGTPEA*RGNPVE
Trigger: TTCAACAGGGTTTCCCCTTCAGGCCTCCGGGGTCCC...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR GCA 90 bp CCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCGTGCTCAGGATCGTGGGAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PATCIAEHLPRDRAQDRGSWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...CCCACGATCCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR GCA 90 bp CTGCCCCTCAGCCCATCCCCATCTCTCCCAAGGCTTGCATCTACCGCCAGCCTGAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LPLSPSPSLPRLASTASLSWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...CAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATGGGGATGGGCTGAGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp CTGCCCCTCAGCCCATCCCCATCTCTCCCAAGGCTTGCATCTACCGCCAGCCTGCTGGCGGCTTCCAAATaGGCAGCCCCTCACGGGCCG +
Preference number: 4 (lower is better)
Translates to: LPLSPSPSLPRLASTASLLAASK*AAPHGP
Trigger: CGGCCCGTGAGGGGCTGCGCATTTGGAAGCCGCCAG...CAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATGGGGATGGGCTGAGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TCAGCCCATCCCCATCTCTCCCAAGGCTTGCATCTACCGCCAGCCTGGCGGCTTTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SAHPHLSQGLHLPPAWRLWTRVC*HGEGAG
Trigger: CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCA...AAGCCGCCAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATGGGGATGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp AACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCCACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NTSEEAGLVCAGTGRAPGHLRGS*TRVCWH
Trigger: GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTG...GCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp CCCAGCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCTCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSPRTPAREGQRPSHRAVSTFSY*RSRSRR
Trigger: CCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGA...GACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000567065.5
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGACTCCCTGCCCGCAGCCTCTCCCAGATCCAGCTCCTCCGCACGGCAGCCAGATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCG +
Preference number: 4 (lower is better)
Translates to: WTPCPQPLPDPAPPHGSQIVPAT*IAEHLP
Trigger: CGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGAT...CTGGCTGCCGTGCGGAGGAGCTGGATCTGGGAGAGGCTGCGGGCAGGGAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTCAGGCGGGCAGCAGCAGGATaGTGTCCTGGGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AILSFRGRRGRFSRLGLRRAAAG*CPGLCS
Trigger: AGAGCAAAGCCCAGGACAGCATCCTGCTGCTGCCCG...CCTGAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR GCA 90 bp AAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCCTAACTGGACTCCCTaGCCGCAGCCTCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KHLRGSWTRVCWHGEGAGPNWTP*PQPLPD
Trigger: ATCTGGGAGAGGCTGCGGGCAGGGAGTCCAGTTAGG...CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR GCA 90 bp AAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCG +
Preference number: 4 (lower is better)
Translates to: KHLRGSWTRVCWHGEGAGIVPAT*IAEHLP
Trigger: CGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGAT...CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp ACTCCCTGCCCGCAGCCTCTCCCAGATCCAGCTCCTCCGCACGGCAGCCAGAGCCCTGGGGGACACCCGTaGATGTTTACGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TPCPQPLPDPAPPHGSQSPGGHP*MFTPFL
Trigger: CAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGG...GCTCTGGCTGCCGTGCGGAGGAGCTGGATCTGGGAGAGGCTGCGGGCAGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GCACGGCAGCCAGAGCGCGCGCTCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCCTAGCCCTGTACAGCTaGCCTTTTAAAGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ARQPERALLSFRGRRGRFLALYS*PFKEVA
Trigger: GGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAG...GAAACGGCCCCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGGCTGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CCA 90 bp TGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGGTATCTGATGATGCAGTaGCATCTGAGTCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WHGEGAGRGRGGHGVMSRYLMMQ*HLSPKS
Trigger: ACTCTTCGGACTCAGATGCCACTGCATCATCAGATA...CCGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGGTGTGTCAGACAACTTaGGTGTCCCCTCCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGVCQTT*VSPPSR
Trigger: GCGAGACGGAGGGGACACCCAAGTTGTCTGACACAC...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR CCA 90 bp ACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCCGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 4 (lower is better)
Translates to: TRACLRLFWLCQWPEHGSRRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...GCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GCCACCCTCCTGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ATLLGDTRACLRLFWLCQWTRVC*HGEGAG
Trigger: CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCA...CTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGGAGGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp GTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VAGAWQLGINKHLRGSWTVAPRV*PPATPS
Trigger: GCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCAC...AGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCAAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GGHPCMFTPFLVVSVAGASWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...TGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCCCTCCCGGGGGACACTaGGACAGGAGCGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FWLCQWPEHGSWASINTSPPGGH*DRSAAA
Trigger: GGCTGCCGCGCTCCTGTCCCAGTGTCCCCCGGGAGG...GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp CCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PCMFTPFLVVSVAGAWQLWTRVC*HGEGAG
Trigger: CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCA...CAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp ACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: TRACLRLFWLCQWPEHGSWTRVC*HGEGAG
Trigger: CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCA...GCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp AGGTGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCAGATGGGAGGCGGAATaGACCGGGGTGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RWQMLPATRLNNCPLEGARWEAE*TGVRVG
Trigger: CCCCACCCTCACCCCGGTCCATTCCGCCTCCCATCT...GGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CCA 90 bp GGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCAGGGCGGGAGCGGGGATaGAGATGGGAGGCGGAATGG +
Preference number: 4 (lower is better)
Translates to: GGHPCMFTPFLVVSVAGAGRERG*RWEAEW
Trigger: CCATTCCGCCTCCCATCTCCATCCCCGCTCCCGCCC...TGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CCA 90 bp AGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGTGGGCCTCAGGGGACTaGGCTCGGGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWASINTSEEAGLVCAGTWASGD*ARAAAG
Trigger: CCCTGCAGCTGCCCGAGCCCAGTCCCCTGAGGCCCA...CGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CACGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGGCCCTGGAGGCATCCTaGCCTCTCTCCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HGHSGMSITRSSSPSKASALEAS*PLSRTA
Trigger: GGCTGTGCGGGAGAGAGGCCAGGATGCCTCCAGGGC...CGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCTGGGCCTCAGGGGACTaGGCTCGGGCAGCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: WPEHGSWASINTSEEAGLWASGD*ARAASS
Trigger: TGAGCTCGCTGCCCGAGCCCAGTCCCCTGAGGCCCA...GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567705.5
CDS-3UTR TCA 90 bp GGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCGTTGCCCGTGACCAGTaGGAAAGGCAGCGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: GSWASINTSEEAGLVCAGVARDQ*ERQRRG
Trigger: CCCGCGACGCTGCCTTTCTCACTGGTCACGGGCAAC...GCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR TCA 90 bp CGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCGTGGTGGGCATGGCGTaGTGTCACGGTCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: RSLRDVDHQVIVSIQGIVVVGMA*CHGHSG
Trigger: CCCGGAGTGACCGTGACATCACGCCATGCCCACCAC...GACGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GTCACGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VTVTPGCRSPGHRLHPRHVAPRV*PPATPS
Trigger: GCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCAC...ATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR GCA 90 bp AATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGCATCGCTGAACATCTaGCGAGGGACCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NKHLRGSWTRVCWHGEGAASLNI*RGTVLR
Trigger: CCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGC...GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp GCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCCGGCAGCCACTGCGCTaGGGATGGCGTAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: AWQLGINKHLRGSWTRVCRQPLR*GWRSSD
Trigger: GTCGCTGCTACGCCATCCCCAGCGCAGTGGCTGCCG...GCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp TGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCACGCTACCCCAAGCAGTaGCTGCCGTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CLRLFWLCQWPEHGSWASRYPKQ*LPCRSR
Trigger: GCGGGAGCGGCACGGCAGCCACTGCTTGGGGTAGCG...TGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp CCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCGCCGGGCGGGGCCGTaGTGGGCATGGCGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PFLVVSVAGAWQLGINKHRRAGP*WAWRDV
Trigger: GACATCACGCCATGCCCACCACGGCCCCGCCCGGCG...GTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CTGGACTCCCTGCCCGCAGCCTCTCCCAGATCCAGCTCCTCCGCACGGCAGCCATGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LDSLPAASPRSSSSARQPCLRLF*LCQWPE
Trigger: CTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA...TGGCTGCCGTGCGGAGGAGCTGGATCTGGGAGAGGCTGCGGGCAGGGAGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR CCA 90 bp GGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCCCCCTGCCACCCTCCTaGGGGACACCCGTGCATGTT +
Preference number: 4 (lower is better)
Translates to: GSWASINTSEEAGLVCAGPLPPS*GTPVHV
Trigger: AACATGCACGGGTGTCCCCCAGGAGGGTGGCAGGGG...GCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCACCCCTGCCACCCTCCTaGGGGACACCCGTGCATGTT +
Preference number: 4 (lower is better)
Translates to: GGHPCMFTPFLVVSVAGAPLPPS*GTPVHV
Trigger: AACATGCACGGGTGTCCCCCAGGAGGGTGGCAGGGG...TGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCCCCCTGCCACCCTCCTaGGGGACACCCGTGCATGTT +
Preference number: 4 (lower is better)
Translates to: WPEHGSWASINTSEEAGLPLPPS*GTPVHV
Trigger: AACATGCACGGGTGTCCCCCAGGAGGGTGGCAGGGG...GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTCTGCCTCCCCTGCCTCCCCAGCAGGTaGCAGATGCTCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: PCTAALLKRWPLQGLCLPCLPSR*QMLPAT
Trigger: AGTGGCCGGGAGCATCTGCCACCTGCTGGGGAGGCA...GGGGAGGCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CACGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGGAGCGGGGATGGAGATaGGAGGCGGAATGGACCGGG +
Preference number: 4 (lower is better)
Translates to: HGHSGMSITRSSSPSKASERGWR*EAEWTG
Trigger: CCCGGTCCATTCCGCCTCCCATCTCCATCCCCGCTC...CGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CCA 90 bp ACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCATGGGCCTCAGGGGACTaGGCTCGGGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TPVHVYAFSGCVSGRSMAWASGD*ARAAAG
Trigger: CCCTGCAGCTGCCCGAGCCCAGTCCCCTGAGGCCCA...TGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GCGGCTTCCAAATGCGCAGCCCCTCACGGGCCGCTATCTAGCTGCCTTTCCAGACATCTACCGCCAGCCTaGCGGCTTCCAAATGCGCAG +
Preference number: 4 (lower is better)
Translates to: AASKCAAPHGPLSSCLSRHLPPA*RLPNAQ
Trigger: CTGCGCATTTGGAAGCCGCCAGGCTGGCGGTAGATG...TCTGGAAAGGCAGCTAGATAGCGGCCCGTGAGGGGCTGCGCATTTGGAAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TTCTGGCTCCAGAACCCTGGGAGCCGCCCAGTTGGTCCCCACTCCGCTCTGCCCGCCCTTTTAAAGAGGTaGCCATTGCAGGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FWLQNPGSRPVGPHSALPALLKR*PLQGLC
Trigger: GCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGC...GGGCAGAGCGGAGTGGGGACCAACTGGGCGGCTCCCAGGGTTCTGGAGCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp CTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTCTGCCTCCCCAGCAGCGAGCTCAGGTATaGGGAGGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LYSCPFKEVAIAGSLPPQQRAQV*GGDPGG
Trigger: GCCTCCGGGGTCCCCTCCCCATACCTGAGCTCGCTG...CTGGGGAGGCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGCAGCGAGCTCAGGTATaGGGAGGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WLCQWPEHGSWASINTSEQRAQV*GGDPGG
Trigger: GCCTCCGGGGTCCCCTCCCCATACCTGAGCTCGCTG...CTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR TCA 90 bp GGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGGTGGTGGGCATGGCGTaGTGTCACGGTCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: GAWQLGINKHLRGSWTRVVVGMA*CHGHSG
Trigger: CCCGGAGTGACCGTGACATCACGCCATGCCCACCAC...CACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp TTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGCGCGGCAGCCACTaGGCTGGGGATGGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: FWLCQWPEHGSWASINTSERGSH*AGDGVA
Trigger: TGCTACGCCATCCCCAGCGCAGTGGCTGCCGCGCTC...GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR GCA 90 bp ACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TPVHVYAFSGCVSGRSMAVAPRV*PPATPS
Trigger: GCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCAC...TGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp CATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: HGSWASINTSEEAGLVCASWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...AGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCCCATTGCAGGGTCTCTaGCTCCCCAGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSWASINTSEEAGLVCAGPLQGL*LPSRWQ
Trigger: CTGCCACCTGCTGGGGAGGCAGAGACCCTGCAATGG...GCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp ACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCGTCCCCACTCCGCTCTaGCCCTCAGCCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: TRACLRLFWLCQWPEHGSVPTPL*PSAHPH
Trigger: ATGGGGATGGGCTGAGGGGCAGAGCGGAGTGGGGAC...GCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAACCACTGCGCTGGGGATaGCGTAGCAGCGACGCGGTG +
Preference number: 4 (lower is better)
Translates to: LCQWPEHGSWASINTSEEPLRWG*RSSDAV
Trigger: CACCGCGTCGCTGCTACGCCATCCCCAGCGCAGTGG...TTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp TGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGGGGCCGTGGTGGGCATaGCGTGATGTCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: WASINTSEEAGLVCAGTGGPWWA*RDVTVT
Trigger: AGTGACCGTGACATCACGCCATGCCCACCACGGCCC...CCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTGGACTCGTGTGTGCTaGCACGGGGAGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LFWLCQWPEHGSWASINTWTRVC*HGEGAG
Trigger: CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCA...GGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp GGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCCTCCCCAGCAGGTaGCAGATGCTCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: GAWQLGINKHLRGSWTRVCLPSR*QMLPAT
Trigger: AGTGGCCGGGAGCATCTGCCACCTGCTGGGGAGGCA...CACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGACTCCTCAGTCAGGCCTaGCCCCGTTCCGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VVSVAGAWQLGINKHLRGLLSQA*PRSELR
Trigger: CCTGAGCTCGGAACGGGGCCAGGCCTGACTGAGGAG...TCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CCA 90 bp CATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTTGGGAGCCGCCCAGTTaGTCCCCACTCCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HGSWASINTSEEAGLVCAWEPPS*SPLRSA
Trigger: GGCAGAGCGGAGTGGGGACCAACTGGGCGGCTCCCA...AGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR TCA 90 bp GTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTGGCAGCGTCGCGGGCTaGTTAGGTTTCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VAGAWQLGINKHLRGSWTGSVAG*LGFTQR
Trigger: CCTTTGGGTGAAACCTAATCAGCCCGCGACGCTGCC...AGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR TCA 90 bp TGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGGTAGCAGCGACGCGGTaGCGCCACAAAAATGGCGGA +
Preference number: 4 (lower is better)
Translates to: WASINTSEEAGLVCAGTGVAATR*RHKNGG
Trigger: TCCGCCATTTTTGTGGCGTCACCGCGTCGCTGCTAC...CCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR TCA 90 bp CACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGGGGACCCCGGAGGCCTaGAGGGGAAACCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HPCMFTPFLVVSVAGAWQGTPEA*RGNPVE
Trigger: TTCAACAGGGTTTCCCCTTCAGGCCTCCGGGGTCCC...CTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR TCA 90 bp AGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGACCCCGGAGGCCTaGAGGGGAAACCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SWASINTSEEAGLVCAGTGTPEA*RGNPVE
Trigger: TTCAACAGGGTTTCCCCTTCAGGCCTCCGGGGTCCC...CGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR TCA 90 bp GGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGGGGACCCCGGAGGCCTaGAGGGGAAACCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GHPCMFTPFLVVSVAGAWGTPEA*RGNPVE
Trigger: TTCAACAGGGTTTCCCCTTCAGGCCTCCGGGGTCCC...CCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp TTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCAAGCAGTGGCTGCCGTaGCGCTCCCGCCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: FWLCQWPEHGSWASINTSKQWLP*RSRLHF
Trigger: GAAGTGGAGGCGGGAGCGGCACGGCAGCCACTGCTT...GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR GCA 90 bp TTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LRLFWLCQWPEHGSWASIVAPRV*PPATPS
Trigger: GCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCAC...TATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp CCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACAGCTGGACTCGTGTGTaGTGGCACGGGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PFLVVSVAGAWQLGINKHSWTRV*WHGEGA
Trigger: GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCT...GTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCCCATTGCAGGGTCTCTaGCTCCCCAGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AWQLGINKHLRGSWTRVCPLQGL*LPSRWQ
Trigger: CTGCCACCTGCTGGGGAGGCAGAGACCCTGCAATGG...GCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp GTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCCCCGGGCAGCAGCAGGATaGTGTCCTGGGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VTPGCRSPGHRLHPRHRPRAAAG*CPGLCS
Trigger: AGAGCAAAGCCCAGGACAGCATCCTGCTGCTGCCCG...GGGACGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CCA 90 bp CAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGCCGTGGTGGGCATaGCGTGATGTCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: QLGINKHLRGSWTRVCWHGPWWA*RDVTVT
Trigger: AGTGACCGTGACATCACGCCATGCCCACCACGGCCC...GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCCACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WPEHGSWASINTSEEAGLHLRGS*TRVCWH
Trigger: GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTG...GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCGGGCCGGAGCATGGCAGCTaGGCATCAATAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: WQMLPATRLNNCPLEGAGPEHGS*ASINTS
Trigger: GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG...CCCGGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTCCCCTGCCACCCTCCTaGGGGACACCCGTGCATGTT +
Preference number: 4 (lower is better)
Translates to: HGSWASINTSEEAGLVCAPLPPS*GTPVHV
Trigger: AACATGCACGGGTGTCCCCCAGGAGGGTGGCAGGGG...AGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCATGCCTCCCCAGCAGGTaGCAGATGCTCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: CLRLFWLCQWPEHGSWASCLPSR*QMLPAT
Trigger: AGTGGCCGGGAGCATCTGCCACCTGCTGGGGAGGCA...TGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TCCAGATCCTGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGTGCCTCCCCAGCAGGTaGCAGATGCTCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: SRSCTPDHRKCGLSFCFWCLPSR*QMLPAT
Trigger: AGTGGCCGGGAGCATCTGCCACCTGCTGGGGAGGCA...CCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACAGGATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCATTCCGAGCTCAGGTATaGGGAGGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CLRLFWLCQWPEHGSWASFRAQV*GGDPGG
Trigger: GCCTCCGGGGTCCCCTCCCCATACCTGAGCTCGGAA...TGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CCA 90 bp CCATCCAAGGCATCGTCCCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCGCTCATTCTCTGAAATaGGTCCGCAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSKASSPLPASLNICRGTAHSLK*VRSSLW
Trigger: CCAGAGGGAGCTGCGGACCCATTTCAGAGAATGAGC...GGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp AGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGATCTCCTCACTCCCCTaGCCCTTCAGGGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: SWASINTSEEAGLVCAGTISSLP*PFRDSR
Trigger: GCGGGAGTCCCTGAAGGGCCAGGGGAGTGAGGAGAT...CGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
3UTR CAA 72 bp CTGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LGDTRACLRLFW*CQWPEHGSWAS
Trigger: TGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR TCA 90 bp GGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCAAGGGGAAACCCTGTTaGAGGAGGCAGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSWASINTSEEAGLVCAGKGKPC*RRQGEA
Trigger: AGCCTCTCCCTGCCTCCTTCAACAGGGTTTCCCCTT...GCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR TCA 90 bp GTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAAGGGACCCCGGAGGCCTaGAGGGGAAACCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VYAFSGCVSGRSMAAGHQGTPEA*RGNPVE
Trigger: TTCAACAGGGTTTCCCCTTCAGGCCTCCGGGGTCCC...TTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR TCA 90 bp TTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAGTGGTGGGCATGGCGTaGTGTCACGGTCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: LRLFWLCQWPEHGSWASIVVGMA*CHGHSG
Trigger: CCCGGAGTGACCGTGACATCACGCCATGCCCACCAC...TATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp GGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGCACTTCCGGAGACGCTaGAAGGCTGTGCCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GAWQLGINKHLRGSWTRVHFRRR*KAVPSG
Trigger: TCCTGACGGCACAGCCTTGCAGCGTCTCCGGAAGTG...CACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR GCA 90 bp AGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGCATCGCTGAACATCTaGCGAGGGACCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SWASINTSEEAGLVCAGTASLNI*RGTVLR
Trigger: CCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGC...CGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCG +
Preference number: 4 (lower is better)
Translates to: VAGAWQLGINKHLRGSWTIVPAT*IAEHLP
Trigger: CGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGAT...AGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCG +
Preference number: 4 (lower is better)
Translates to: WASINTSEEAGLVCAGTGIVPAT*IAEHLP
Trigger: CGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGAT...CCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCATCGTCCCCGCTACCTaGATCGCTGAACATCTGCCG +
Preference number: 4 (lower is better)
Translates to: WPEHGSWASINTSEEAGLIVPAT*IAEHLP
Trigger: CGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGAT...GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GATCCTGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGCTCCTCCCTCTGGACCCTCTaGCCTTGGCCTGGTTTACCG +
Preference number: 4 (lower is better)
Translates to: DPVLQTTANAASHSASGSSLWTL*PWPGLP
Trigger: CGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGA...GGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp CCATCCAAGGCATCGTCCCCGCTACCTGCATCGCTGAACATCTGCCGAGGGACCCAGCTATCCTTCCTCTaGTTGGACTCCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PSKASSPLPASLNICRGTQLSFL*LDSLPS
Trigger: GGAAGGAAGGGAGTCCAAGCAGAGGAAGGATAGCTG...GGTCCCTCGGCAGATGTTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCGGGAAAAATGGCGGACGCTaGAAAGCGCCGTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: WQMLPATRLNNCPLEGAGKNGGR*KAPFLT
Trigger: AGTCAGGAACGGCGCTTTCCAGCGTCCGCCATTTTT...CCCGGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp GCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTCAGGTATCTGATGATGCAGTaGCATCTGAGTCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: AILSFRGRRGRFSRLGLRYLMMQ*HLSPKS
Trigger: ACTCTTCGGACTCAGATGCCACTGCATCATCAGATA...CCTGAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR CCA 90 bp AAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGTATCTGATGATGCAGTaGCATCTGAGTCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KHLRGSWTRVCWHGEGAGYLMMQ*HLSPKS
Trigger: ACTCTTCGGACTCAGATGCCACTGCATCATCAGATA...CCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGGTGTGTCAGACAACTTaGGTGTCCCCTCCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: PEHGSWASINTSEEAGLVVCQTT*VSPPSR
Trigger: GCGAGACGGAGGGGACACCCAAGTTGTCTGACACAC...CACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGGTGTGTCAGACAACTTaGGTGTCCCCTCCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: WASINTSEEAGLVCAGTGVCQTT*VSPPSR
Trigger: GCGAGACGGAGGGGACACCCAAGTTGTCTGACACAC...CCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCCATCGAGCTCAGGTATaGGGAGGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFWLCQWPEHGSWASINTHRAQV*GGDPGG
Trigger: GCCTCCGGGGTCCCCTCCCCATACCTGAGCTCGATG...GGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp GATCCTGTACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGCTCCCACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DPVLQTTANAASHSASGSHLRGS*TRVCWH
Trigger: GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTG...GGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGTACAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp ATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCTTCTGGTTGTGTCAGTaGCCGGAGCATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: INKHLRGSWTRVCWHGEGFWLCQ*PEHGSW
Trigger: CCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA...GCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCTTTCCTCCAAGCCTGTaGTCCCACAGCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: RSLRDVDHQVIVSIQGIVFPPSL*SHSPPI
Trigger: GATGGGAGGGCTGTGGGACCACAGGCTTGGAGGAAA...GACGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGCCGAGGTTCCTCATCTaGTCGCGAGGATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: WASINTSEEAGLVCAGTGPRFLI*SRGCLF
Trigger: GAAAAGGCATCCTCGCGAGCAGATGAGGAACCTCGG...CCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR GCA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGACGCTGCAAGGCTGTaGCGTCAGGACTACAACTCC +
Preference number: 4 (lower is better)
Translates to: CQWPEHGSWASINTSEEADAARL*RQDYNS
Trigger: GGAGTTGTAGTCCTGACGGCACAGCCTTGCAGCGTC...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR GCA 90 bp AAAAACCTAGCCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: KNLALYSCPFKEVAIAGSVAPRV*PPATPS
Trigger: GCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCAC...AGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAGGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp TGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAGCATCGCTGAACATCTaGCGAGGGACCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CLRLFWLCQWPEHGSWASASLNI*RGTVLR
Trigger: CCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGC...TGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp GTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAAGCATCGCTGAACATCTaGCGAGGGACCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VYAFSGCVSGRSMAAGHQASLNI*RGTVLR
Trigger: CCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGC...TTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp TTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATACCATTGCAGGGTCTCTaGCTCCCCAGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRLFWLCQWPEHGSWASIPLQGL*LPSRWQ
Trigger: CTGCCACCTGCTGGGGAGGCAGAGACCCTGCAATGG...TATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCCCAGACCACCGCAAATaGGGCCTCTCATTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WPEHGSWASINTSEEAGLPDHRK*GLSFCF
Trigger: GAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGG...GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CCA 90 bp GTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAGTGACGCCACAAAAATaGCGGACGCTGGAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: VVSVAGAWQLGINKHLRGVTPQK*RTLESA
Trigger: GGCGCTTTCCAGCGTCCGCCATTTTTGTGGCGTCAC...TCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp TCACGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTGTGTCAGACAACTTaGGTGTCCCCTCCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SRSLRDVDHQVIVSIQGIVCQTT*VSPPSR
Trigger: GCGAGACGGAGGGGACACCCAAGTTGTCTGACACAC...GATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGTGTGTCAGACAACTTaGGTGTCCCCTCCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: QLGINKHLRGSWTRVCWHVCQTT*VSPPSR
Trigger: GCGAGACGGAGGGGACACCCAAGTTGTCTGACACAC...GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TCACGGTCACTCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCTTCTGGTTGTGTCAGTaGCCGGAGCATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRSLRDVDHQVIVSIQGIFWLCQ*PEHGSW
Trigger: CCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA...GATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGAGTGACCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR CCA 90 bp ACTCCAGACCACCGCAAATGCGGCCTCTCATTCTGCTTCTGGCTCCAGAACCCTTTCTGGTTGTGTCAGTaGCCGGAGCATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPDHRKCGLSFCFWLQNPFWLCQ*PEHGSW
Trigger: CCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA...AGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCATTTGCGGTGGTCTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCTCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: WGTPVHVYAFSGCVSGRSSTFSY*RSRSRR
Trigger: CCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGA...GCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp CCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PEHGSWASINTSEEAGLVSTFSY*RSRSRR
Trigger: CCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGA...CACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCCTGGGGGACACCCGTaGATGTTTACGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GHPCMFTPFLVVSVAGAWPGGHP*MFTPFL
Trigger: CAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGG...CCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp ACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGCGGCCTCTCATTCTaGTTCTGGCTCCAGAACCCT +
Preference number: 4 (lower is better)
Translates to: TRACLRLFWLCQWPEHGSCGLSF*FWLQNP
Trigger: AGGGTTCTGGAGCCAGAAGCAGAATGAGAGGCCGCA...GCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp TTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATCCTAACTGGACTCCCTaGCCGCAGCCTCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: FTPFLVVSVAGAWQLGINPNWTP*PQPLPD
Trigger: ATCTGGGAGAGGCTGCGGGCAGGGAGTCCAGTTAGG...ATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562441.5
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCCTAGCCCTGTACAGCTaGCCTTTTAAAGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WPEHGSWASINTSEEAGLLALYS*PFKEVA
Trigger: GGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAG...GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAAGTGTGTCAGACAACTTaGGTGTCCCCTCCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: VYAFSGCVSGRSMAAGHQVCQTT*VSPPSR
Trigger: GCGAGACGGAGGGGACACCCAAGTTGTCTGACACAC...TTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PFLVVSVAGAWQLGINKHHLRGS*TRVCWH
Trigger: GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTG...GTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp GCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCCCGGAGCATGGCAGCTaGGCATCAATAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: AWQLGINKHLRGSWTRVCPEHGS*ASINTS
Trigger: GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG...GCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTCTCAGACTAAAGCCCTaGAGGCATCCTGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CQWPEHGSWASINTSEEALRLKP*RHPGLS
Trigger: AGAGAGGCCAGGATGCCTCCAGGGCTTTAGTCTGAG...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp GGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGGCGAGACCCTCCAACTaGCCAGAGAAAACAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GHPCMFTPFLVVSVAGAWARPSN*PEKTSL
Trigger: GAGACTTGTTTTCTCTGGGCAGTTGGAGGGTCTCGC...CCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR GCA 90 bp GCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: AWQLGINKHLRGSWTRVCSTFSY*RSRSRR
Trigger: CCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGA...GCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp TGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGTCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: WLCQWPEHGSWASINTSESTFSY*RSRSRR
Trigger: CCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGA...CTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR GCA 90 bp GTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAACCTGGGGGACACCCGTaGATGTTTACGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VYAFSGCVSGRSMAAGHQPGGHP*MFTPFL
Trigger: CAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGG...TTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp AAAAACCTAGCCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTGGGCCGTGGTGGGCATaGCGTGATGTCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: KNLALYSCPFKEVAIAGSGPWWA*RDVTVT
Trigger: AGTGACCGTGACATCACGCCATGCCCACCACGGCCC...AGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAGGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTCCGGAGCATGGCAGCTaGGCATCAATAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: HGSWASINTSEEAGLVCAPEHGS*ASINTS
Trigger: GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG...AGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAACCGGAGCATGGCAGCTaGGCATCAATAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: LCQWPEHGSWASINTSEEPEHGS*ASINTS
Trigger: GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG...TTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTCTGCCTCCCCAGTCAGTGGCCGGAGCATaGCAGCTGGGCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: LYSCPFKEVAIAGSLPPQSVAGA*QLGINK
Trigger: TTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGA...CTGGGGAGGCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTCAGTGGCCGGAGCATaGCAGCTGGGCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: GAWQLGINKHLRGSWTRVSVAGA*QLGINK
Trigger: TTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGA...CACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACTTCTGGTTGTGTCAGTaGCCGGAGCATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PFLVVSVAGAWQLGINKHFWLCQ*PEHGSW
Trigger: CCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA...GTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATTTCTGGTTGTGTCAGTaGCCGGAGCATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FTPFLVVSVAGAWQLGINFWLCQ*PEHGSW
Trigger: CCAGCTGCCATGCTCCGGCCACTGACACAACCAGAA...ATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCTGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: WPEHGSWASINTSEEAGLCLRLF*LCQWPE
Trigger: CTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA...GAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp ATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCTGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: INKHLRGSWTRVCWHGEGCLRLF*LCQWPE
Trigger: CTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA...GCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GCCACCCTCCTGGGGGACACCCGTGCATGTTTACGCCTTTTCTGGTTGTGTCAGTGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: ATLLGDTRACLRLFWLCQCLRLF*LCQWPE
Trigger: CTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA...CTGACACAACCAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGGAGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGCCCTTTTAAAGAGGTaGCCATTGCAGGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CQWPEHGSWASINTSEEAALLKR*PLQGLC
Trigger: GCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGC...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGCCCTTTTAAAGAGGTaGCCATTGCAGGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: WLCQWPEHGSWASINTSEALLKR*PLQGLC
Trigger: GCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGC...CTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp CAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACATCTGCTCGCGAGGATaGCTTTTCTCTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QLGINKHLRGSWTRVCWHICSRG*LFSSAL
Trigger: CAAGGCAGAAGAGAAAAGGCATCCTCGCGAGCAGAT...GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR GCA 90 bp GTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: VYAFSGCVSGRSMAAGHQSTFSY*RSRSRR
Trigger: CCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGA...TTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp AAAAACCTAGCCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTGCATCGCTGAACATCTaGCGAGGGACCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KNLALYSCPFKEVAIAGSASLNI*RGTVLR
Trigger: CCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATGC...AGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp CCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCCTGGGGGACACCCGTaGATGTTTACGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PFLVVSVAGAWQLGINKHPGGHP*MFTPFL
Trigger: CAGAAAAGGCGTAAACATGCACGGGTGTCCCCCAGG...GTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR GCA 90 bp CCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACGGGCCGCTATCTAGCTaGCTTTCCAGATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PFLVVSVAGAWQLGINKHGPLSS*LSRWHL
Trigger: CAGATGCCATCTGGAAAGGCAGCTAGATAGCGGCCC...GTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR GCA 90 bp TTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAACTAGCCCTGTACAGCTaGCCTTTTAAAGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LCQWPEHGSWASINTSEELALYS*PFKEVA
Trigger: GGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAG...TTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCGTGCCGGCGCCGAATTaGTTTCTAACGAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: GSWASINTSEEAGLVCAGVPAPN*FLTRTF
Trigger: AAAAGTTCTCGTTAGAAACCAATTCGGCGCCGGCAC...GCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp AAAAACCTAGCCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTCACCTCCGAGGAAGCTaGACTCGTGTGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KNLALYSCPFKEVAIAGSHLRGS*TRVCWH
Trigger: GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTG...AGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGGCTAGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp CCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCCGGAGCATGGCAGCTaGGCATCAATAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: PFLVVSVAGAWQLGINKHPEHGS*ASINTS
Trigger: GGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGG...GTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAATCAGTGGCCGGAGCATaGCAGCTGGGCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: LCQWPEHGSWASINTSEESVAGA*QLGINK
Trigger: TTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGA...TTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp TTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAAACAAGTCTCGTCTaGCAAAGTTCTCGGCCCACG +
Preference number: 4 (lower is better)
Translates to: FTPFLVVSVAGAWQLGINKTSLV*QSSRPT
Trigger: CGTGGGCCGAGAACTTTGCCAGACGAGACTTGTTTT...ATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CCA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTTATCTGATGATGCAGTaGCATCTGAGTCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CQWPEHGSWASINTSEEAYLMMQ*HLSPKS
Trigger: ACTCTTCGGACTCAGATGCCACTGCATCATCAGATA...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CCA 90 bp CATGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATTATCTGATGATGCAGTaGCATCTGAGTCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HVYAFSGCVSGRSMAAGHYLMMQ*HLSPKS
Trigger: ACTCTTCGGACTCAGATGCCACTGCATCATCAGATA...ATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp GTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATATCTGATGATGCAGTaGCATCTGAGTCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VYAFSGCVSGRSMAAGHQYLMMQ*HLSPKS
Trigger: ACTCTTCGGACTCAGATGCCACTGCATCATCAGATA...TTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CCA 90 bp TTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATATATCCTTCCTCTGCTTaGACTCCCTTCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: LRLFWLCQWPEHGSWASIYPSSA*TPFLPS
Trigger: AGATGGAAGGAAGGGAGTCCAAGCAGAGGAAGGATA...TATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS GCA 90 bp TCCGCCGGCCCGTTCATGACCGGCCCGGGAGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGCAGTGGCTGCCGTGCCGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: SAGPFMTGPGVAPRV*PPATPSSGCRAAPA
Trigger: GGCGGGAGCGGCACGGCAGCCACTGCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCACTCCCGGGCCGGTCATGAACGGGCCGGCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000380503.7
ENST00000569957.5
ENST00000620599.4
CDS GCA 90 bp GGCGCCCAGAGTCTGCCCTCCCGCTACCCCAAGCAGTGGCTGCCGTaGCGCTCCCGCCTCCACTTCCGGAGACGCTGCAAGGCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: GAQSLPSRYPKQWLP*RSRLHFRRRCKAVP
Trigger: CGGCACAGCCTTGCAGCGTCTCCGGAAGTGGAGGCGGGAGCGGCACGGCAGCCACTGCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS GCA 90 bp GGAGTGGCGCCCAGAGTCTGCCCTCCCGCTACCCCAAGCAGTGGCTaGCGTGCCGCTCCCGCCTCCACTTCCGGAGACGCTGCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: GVAPRVCPPATPSSG*RAAPASTSGDAARL
Trigger: CAGCCTTGCAGCGTCTCCGGAAGTGGAGGCGGGAGCGGCACGGCAGCCACTGCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304516.11
ENST00000620599.4
CDS CCA 90 bp GACCTCCCGGGGGACACTGGGACAGGAGCGCGGCAGCCACTGCGCTaGGGATGGCGTAGCAGCGACGCGGTGACGCCACAAAAATGGCGG +
Preference number: 5 (lower is better)
Translates to: DLPGDTGTGARQPLR*GWRSSDAVTPQKWR
Trigger: CCGCCATTTTTGTGGCGTCACCGCGTCGCTGCTACGCCATCCCCAGCGCAGTGGCTGCCGCGCTCCTGTCCCAGTGTCCCCCGGGAGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS-3UTR CAA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGGGTCCCACCGCCATCTaGAGTTTCCGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGGPTAI*SFRGRR
Trigger: CCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGACC...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS GCA 90 bp GCCCCCGCCTTCAGCCTCCCTCAGGTGACTGTCCTCCTGCCGTCCTaGCCCTCCCTAGCACCCCCACGTCAGGGTACCTTGAGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: APAFSLPQVTVLLPS*PSLAPPRQGTLSFR
Trigger: CCGGAAACTCAAGGTACCCTGACGTGGGGGTGCTAGGGAGGGGCAGGACGGCAGGAGGACAGTCACCTGAGGGAGGCTGAAGGCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS GCA 90 bp AGCTCCTCCTGGAAGCACTCGTGCTCCTGTATCACGGGCAAGGGGTaGGCTGGGCCAACGGTCCTCCGTGAAGGGCCCCGGAACCAGCGG +
Preference number: 5 (lower is better)
Translates to: SSSWKHSCSCITGKG*AGPTVLREGPRNQR
Trigger: CCGCTGGTTCCGGGGCCCTTCACGGAGGACCGTTGGCCCAGCGCACCCCTTGCCCGTGATACAGGAGCACGAGTGCTTCCAGGAGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568043.5
CDS-3UTR CAA 90 bp TGGCACGGGGAGGGCGCCGGGCGGGGCCGTGGTGGGCATGGCGTGATGTCACGGGGTGCCGGCGCCGAATaGGTTTCTAACGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: WHGEGAGRGRGGHGVMSRGAGAE*VSNENF
Trigger: AAAGTTCTCGTTAGAAACCAATTCGGCGCCGGCACC...CCGTGACATCACGCCATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS CCA 90 bp TTGCGAGTGTCTCCCTGGCCAGGGCGTGGGCCTCCAGGACGGGAGTaGGGCTCGCATCGCTGGCTCTTCCTCCTCAGATGCAACCCACTC +
Preference number: 5 (lower is better)
Translates to: LRVSPWPGRGPPGRE*GSHRWLFLLRCNPL
Trigger: GAGTGGGTTGCATCTGAGGAGGAAGAGCCAGCGATGCGAGCCCCACTCCCGTCCTGGAGGCCCACGCCCTGGCCAGGGAGACACTCGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563040.5
CDS TCA 90 bp GGAACCAGCGGCCGCTCGCCCCACCCACTTTACACCTGGGTAAACTaGGATCTTGTCCGCGCCAGGCCTCATCCCCCACAGCCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: GTSGRSPHPLYTWVN*DLVRARPHPPQPSR
Trigger: GCGGGAAGGCTGTGGGGGATGAGGCCTGGCGCGGACAAGATCTCAGTTTACCCAGGTGTAAAGTGGGTGGGGCGAGCGGCCGCTGGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568043.5
CDS CCA 90 bp GGAGCCGCGAGACCCTCCAACTGCCCAGAGAAAACAAGTCTCGTCTaGCAAAGTTCTCGGCCCACGCGGTCCGCGGCCAAGGGCCAACGG +
Preference number: 5 (lower is better)
Translates to: GAARPSNCPEKTSLV*QSSRPTRSAAKGQR
Trigger: CCGTTGGCCCTTGGCCGCGGACCGCGTGGGCCGAGAACTTTGCCAGACGAGACTTGTTTTCTCTGGGCAGTTGGAGGGTCTCGCGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS CCA 90 bp GTCCGCAGCTCCCTCTGGACCCTCTGCCCTTGGCCTGGTTTACCGTaGTGGCCTCCTCACTCCCGTCCCAACTCACTCCACCGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: VRSSLWTLCPWPGLP*WPPHSRPNSLHRSV
Trigger: GACTGAGCGGTGGAGTGAGTTGGGACGGGAGTGAGGAGGCCACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540562.1
ENST00000567987.5
ENST00000569957.5
CDS CCA 90 bp CCTAAGGAGCCCTCACTTACCCTCATCTCCGCTGCTGGGGTGGTGTaGGGGCCAGGGTGGGTCAGGCCTCAGGGTATAGGAGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PKEPSLTLISAAGVV*GPGWVRPQGIGGWQ
Trigger: CTGCCAGCCTCCTATACCCTGAGGCCTGACCCACCCTGGCCCCCACACCACCCCAGCAGCGGAGATGAGGGTAAGTGAGGGCTCCTTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS-3UTR CAA 90 bp CCCAGCCCCAGAACCCCGGCCAGGGAAGGTCAGCGGCCCTCCCACAGGGCAGTCTCTAGGAGGAAACTCTaGTCCCGGGACACCTTCAGT +
Preference number: 5 (lower is better)
Translates to: PSPRTPAREGQRPSHRAVSRRKL*SRDTFS
Trigger: ACTGAAGGTGTCCCGGGACAAGAGTTTCCTCCTAGA...GACTGCCCTGTGGGAGGGCCGCTGACCTTCCCTGGCCGGGGTTCTGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000567065.5
ENST00000567987.5
CDS-3UTR CAA 90 bp GCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTCAGGGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: AILSFRGRRGRFSRLGLRGVSDN*GVPSVS
Trigger: CGAGACGGAGGGGACACCCAAGTTGTCTGACACACC...CCTGAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS-3UTR CAA 90 bp GCGCTCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTCAGGATGCTGTCCTGGGCTTaGCTCTCCTCAGTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: ALLSFRGRRGRFSRLGLRMLSWA*LSSVRP
Trigger: AGGCCTGACTGAGGAGAGCAAAGCCCAGGACAGCAT...CCTGAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS TCA 90 bp ACGTGCCAGCAGAGGAGGCTGAACCTGGTGTGGACATGGAGGTCCTaGGGCTTAGGCCTGCTGGGTCCTGCGGGGCAGTGTCCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: TCQQRRLNLVWTWRS*GLGLLGPAGQCPVW
Trigger: CCAGACTGGACACTGCCCCGCAGGACCCAGCAGGCCTAAGCCTCAGGACCTCCATGTCCACACCAGGTTCAGCCTCCTCTGCTGGCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CCA 90 bp CGCAGCTCCCTCTGGACCCTCTGCCCTTGGCCTGGTTTACCGTGGTaGCCTCCTCACTCCCGTCCCAACTCACTCCACCGCTCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RSSLWTLCPWPGLPW*PPHSRPNSLHRSVC
Trigger: ACAGACTGAGCGGTGGAGTGAGTTGGGACGGGAGTGAGGAGGCCACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540562.1
ENST00000567987.5
ENST00000569957.5
CDS-3UTR CAA 90 bp TCCCACCGCCATCTTGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGATGCTGTCCTGGGCTTaGCTCTCCTCAGTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SHRHLEFPGQAGPFLPLGMLSWA*LSSVRP
Trigger: AGGCCTGACTGAGGAGAGCAAAGCCCAGGACAGCAT...CCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567065.5
CDS CCA 90 bp GGCCCTGGGCTAGATGCTGAGTGGGCTGGCAGGAAACGCCATGCGTaGTCTCCAGTGGCCCTTCTGAGTGTCACATTTGGCCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GPGLDAEWAGRKRHA*SPVALLSVTFGPVA
Trigger: GGCCACAGGGCCAAATGTGACACTCAGAAGGGCCACTGGAGACCACGCATGGCGTTTCCTGCCAGCCCACTCAGCATCTAGCCCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS-3UTR CAA 90 bp AACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGGCTTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCAT +
Preference number: 5 (lower is better)
Translates to: NTSEEAGLVCAGTGRAPGLRLFW*CQWPEH
Trigger: ATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA...GCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CAA 90 bp GTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGACTGGGAGCCGCCCAGTaGGTCCCCACTCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: VVSVAGAWQLGINKHLRGLGAAQ*VPTPLC
Trigger: GCAGAGCGGAGTGGGGACCAACTGGGCGGCTCCCAG...TCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CAA 90 bp AATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCCTGACCACCAGTGTCTaGAGTTTCCGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: NKHLRGSWTRVCWHGEGALTTSV*SFRGRR
Trigger: CCGCCTGCCCCGGAAACTCAAGACACTGGTGGTCAG...GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS-3UTR CAA 90 bp AATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCGCCGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: NKHLRGSWTRVCWHGEGAGVSDN*GVPSVS
Trigger: CGAGACGGAGGGGACACCCAAGTTGTCTGACACACC...GGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CAA 90 bp TGTTTACGCCTTTTCTGGTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCACCAGAGCGCGCGCTCTaGAGTTTCCGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: CLRLFWLCQWPEHGSWASPERAL*SFRGRR
Trigger: CCGCCTGCCCCGGAAACTCAAGAGCGCGCGCTCTGG...TGATGCCCAGCTGCCATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562441.5
CDS-3UTR CAA 90 bp TGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGTCCCACCGCCATCTaGAGTTTCCGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: CQWPEHGSWASINTSEEAGPTAI*SFRGRR
Trigger: CCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGACC...AGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563197.6
ENST00000567705.5
CDS-3UTR CAA 90 bp GCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCGGTCCCACCGCCATCTaGAGTTTCCGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: AWQLGINKHLRGSWTRVCGPTAI*SFRGRR
Trigger: CCGCCTGCCCCGGAAACTCAAGATGGCGGTGGGACC...GCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563197.6
ENST00000567705.5
CDS TCA 90 bp ATGTCCCACCCTGGCCTGGACTTCCTCAGTGGCGTCCTCTCAGCCTaGCTGGCAGCGGCTCACATTTCTCTGTGGCTTACTAGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: MSHPGLDFLSGVLSA*LAAAHISLWLTRGQ
Trigger: CTGGCCCCTAGTAAGCCACAGAGAAATGTGAGCCGCTGCCAGTCAGGCTGAGAGGACGCCACTGAGGAAGTCCAGGCCAGGGTGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS-3UTR CAA 90 bp AGGTGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: RWQMLPATRLNNCPLEGAGVSDN*GVPSVS
Trigger: CGAGACGGAGGGGACACCCAAGTTGTCTGACACACC...GGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS TCA 90 bp AGTGGGCTGGCAGGAAACGCCATGCGTGGTCTCCAGTGGCCCTTCTaGGTGTCACATTTGGCCCTGTGGCCTCCTCTCTGCTTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: SGLAGNAMRGLQWPF*VSHLALWPPLCFLR
Trigger: CCTTAGGAAGCAGAGAGGAGGCCACAGGGCCAAATGTGACACTCAGAAGGGCCACTGGAGACCACGCATGGCGTTTCCTGCCAGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS GCA 90 bp GCCACTGTCCAGGCCTTCCATGACCCCACCCCACCCGGTTCTTCTTaGCAATTTCTTACCACTCCTGCTCTGGCCCAGGCAGTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: ATVQAFHDPTPPGSS*QFLTTPALAQAVLS
Trigger: GGAAAGCACTGCCTGGGCCAGAGCAGGAGTGGTAAGAAATTGGCAAGAAGAACCGGGTGGGGTGGGGTCATGGAAGGCCTGGACAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS-3UTR CAA 90 bp GTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: VAGAWQLGINKHLRGSWTGVSDN*GVPSVS
Trigger: CGAGACGGAGGGGACACCCAAGTTGTCTGACACACC...AGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CAA 90 bp CCCTGTACAGCTGCCCTTTTAAAGAGGTGGCCATTGCAGGGTCTCTGCCTCCCCGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: PCTAALLKRWPLQGLCLPGVSDN*GVPSVS
Trigger: CGAGACGGAGGGGACACCCAAGTTGTCTGACACACC...GGGGAGGCAGAGACCCTGCAATGGCCACCTCTTTAAAAGGGCAGCTGTACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CAA 90 bp GTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGACTGGACCCTCTGCCCTaGGCCTGGTTTACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: VVSVAGAWQLGINKHLRGLDPLP*AWFTVV
Trigger: CACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAG...TCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS TCA 90 bp CCCTGGGCATCCTGCTCTATTTGTCAGAAGTCCTGCTTTGTCCTCTaGGGGTGGGAAGTGGCCTCTGCCCTGCTCAACCCTTCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: PWASCSICQKSCFVL*GWEVASALLNPSAP
Trigger: GGGAGCTGAAGGGTTGAGCAGGGCAGAGGCCACTTCCCACCCTCAGAGGACAAAGCAGGACTTCTGACAAATAGAGCAGGATGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS GCA 90 bp AGTAATTTCCTTTGCGCTTTCCTCAGCTCCTCCTGGAAGCACTCGTaGTCCTGTATCACGGGCAAGGGGTGCGCTGGGCCAACGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SNFLCAFLSSSWKHS*SCITGKGCAGPTVL
Trigger: GAGGACCGTTGGCCCAGCGCACCCCTTGCCCGTGATACAGGAGCACGAGTGCTTCCAGGAGGAGCTGAGGAAAGCGCAAAGGAAATTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568043.5
CDS CCA 90 bp GAAAGGGCGGGATCCCTGGCATCTGCACACCGGGTCCTCCAAGGCTaGTTCTGCCCTGATTTGTCTCCATACAAGCCTGTAAGCCGAGAC +
Preference number: 5 (lower is better)
Translates to: ERAGSLASAHRVLQG*FCPDLSPYKPVSRD
Trigger: GTCTCGGCTTACAGGCTTGTATGGAGACAAATCAGGGCAGAACCAGCCTTGGAGGACCCGGTGTGCAGATGCCAGGGATCCCGCCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS-3UTR CAA 90 bp CAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: QLGINKHLRGSWTRVCWHGVSDN*GVPSVS
Trigger: CGAGACGGAGGGGACACCCAAGTTGTCTGACACACC...GTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CAA 90 bp TGGCAGATGCTCCCGGCCACTCGTTTAAATAACTGTCCCCTGGAGGGGGCCGGGTTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCAT +
Preference number: 5 (lower is better)
Translates to: WQMLPATRLNNCPLEGAGLRLFW*CQWPEH
Trigger: ATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA...CCCGGCCCCCTCCAGGGGACAGTTATTTAAACGAGTGGCCGGGAGCATCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CAA 90 bp AGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGCATCTCTCCCAAGGCTaGCATCTACCGCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SWASINTSEEAGLVCAGTHLSQG*HLPPAW
Trigger: CCAGGCTGGCGGTAGATGCAAGCCTTGGGAGAGATG...CGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS GCA 90 bp GCGGGATCCCTGGCATCTGCACACCGGGTCCTCCAAGGCTGGTTCTaGCCTGATTTGTCTCCATACAAGCCTGTAAGCCGAGACTTCTGT +
Preference number: 5 (lower is better)
Translates to: AGSLASAHRVLQGWF*PDLSPYKPVSRDFC
Trigger: ACAGAAGTCTCGGCTTACAGGCTTGTATGGAGACAAATCAGGGCAGAACCAGCCTTGGAGGACCCGGTGTGCAGATGCCAGGGATCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS GCA 90 bp CTTGCTGCCATTTCCTGTAAGTCTCTGATCAAGAACATCCCAGACTaGTGGGCCCTAAGTGTCAGCCTCGTCCCCCTGGCGTCCCCATGC +
Preference number: 5 (lower is better)
Translates to: LAAISCKSLIKNIPD*WALSVSLVPLASPC
Trigger: GCATGGGGACGCCAGGGGGACGAGGCTGACACTTAGGGCCCAGCAGTCTGGGATGTTCTTGATCAGAGACTTACAGGAAATGGCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 90 bp GCTGCCATTTCCTGTAAGTCTCTGATCAAGAACATCCCAGACTGCTaGGCCCTAAGTGTCAGCCTCGTCCCCCTGGCGTCCCCATGCTCT +
Preference number: 5 (lower is better)
Translates to: AAISCKSLIKNIPDC*ALSVSLVPLASPCS
Trigger: AGAGCATGGGGACGCCAGGGGGACGAGGCTGACACTTAGGGCCCAGCAGTCTGGGATGTTCTTGATCAGAGACTTACAGGAAATGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 90 bp GTGGGTCTCCTCTGCAGTCCCCGTGCTTTGTCTGTGGGCACAAACTaGGCACCTGCTGTGTGTCAGGTGGTTTCTGTTAATGCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: VGLLCSPRALSVGTN*APAVCQVVSVNALP
Trigger: TGGGAGGGCATTAACAGAAACCACCTGACACACAGCAGGTGCCCAGTTTGTGCCCACAGACAAAGCACGGGGACTGCAGAGGAGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS GCA 90 bp GGGTCCGAATGTAGATTTCCTAGGAAGCACATCGCCCTCCGCCCCTaGAACGTGCCTCACCTCTTGTCCCGGGACACCTTCAGTAATTTC +
Preference number: 5 (lower is better)
Translates to: GSECRFPRKHIALRP*NVPHLLSRDTFSNF
Trigger: GAAATTACTGAAGGTGTCCCGGGACAAGAGGTGAGGCACGTTGCAGGGGCGGAGGGCGATGTGCTTCCTAGGAAATCTACATTCGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS GCA 90 bp GCAACCCACTCTGGCCATGAACATGCTGGGTTCTCTCCCACCTCCTaGCCTGAATTCCCCTCAAACAGGATGTTAACTGGAAGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: ATHSGHEHAGFSPTS*PEFPSNRMLTGSPR
Trigger: TCGGGGGCTTCCAGTTAACATCCTGTTTGAGGGGAATTCAGGGCAGGAGGTGGGAGAGAACCCAGCATGTTCATGGCCAGAGTGGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563040.5
CDS CCA 90 bp CCTCCCAGCTGGCCCATCGGATACTTGAAAGAGCCCATGCACTTGTaGCCCTACTCGGGGATGGGGTCCGAATGTAGATTTCCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: PPSWPIGYLKEPMHL*PYSGMGSECRFPRK
Trigger: CTTCCTAGGAAATCTACATTCGGACCCCATCCCCGAGTAGGGCCACAAGTGCATGGGCTCTTTCAAGTATCCGATGGGCCAGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS-3UTR CAA 90 bp ATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTGGCACGGGGAGGGCTCTAGGAGGAAACTCTaGTCCCGGGACACCTTCAGT +
Preference number: 5 (lower is better)
Translates to: INKHLRGSWTRVCWHGEGSRRKL*SRDTFS
Trigger: ACTGAAGGTGTCCCGGGACAAGAGTTTCCTCCTAGA...GCCCTCCCCGTGCCAGCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CAA 90 bp GTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTTCTAGGAGGAAACTCTaGTCCCGGGACACCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VAGAWQLGINKHLRGSWTSRRKL*SRDTFS
Trigger: ACTGAAGGTGTCCCGGGACAAGAGTTTCCTCCTAGA...AGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS TCA 90 bp TCTGCCTTGCGAAATAACAGCAGCCTAGCTGTTGCCCGTGACCAGTaGGAAAGGCAGCGTCGCGGGCTGATTAGGTTTCACCCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: SALRNNSSLAVARDQ*ERQRRGLIRFHPKG
Trigger: ACCCTTTGGGTGAAACCTAATCAGCCCGCGACGCTGCCTTTCTCACTGGTCACGGGCAACAGCTAGGCTGCTGTTATTTCGCAAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS GCA 90 bp CACCTCATGAGCTCCCCCTCTGACCTGCTCCGGGACCCAATTCCCTaGTTACTTTTCTCCCAAACACAGACTCTGCCCGACAGAAACACT +
Preference number: 5 (lower is better)
Translates to: HLMSSPSDLLRDPIP*LLFSQTQTLPDRNT
Trigger: AGTGTTTCTGTCGGGCAGAGTCTGTGTTTGGGAGAAAAGTAAGCAGGGAATTGGGTCCCGGAGCAGGTCAGAGGGGGAGCTCATGAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS GCA 90 bp CACCTCCTCTGTGAAGTCTTCCAGAATCCCTCAAGCCCAGTTAACTaGAGGCTCTCCTGGAACGCTCTACTCTCGTCATGGCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: HLLCEVFQNPSSPVN*RLSWNALLSSWLPS
Trigger: TGAGGGCAGCCATGACGAGAGTAGAGCGTTCCAGGAGAGCCTGCAGTTAACTGGGCTTGAGGGATTCTGGAAGACTTCACAGAGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563040.5
CDS-3UTR CAA 90 bp GCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTGCTCTAGGAGGAAACTCTaGTCCCGGGACACCTTCAGT +
Preference number: 5 (lower is better)
Translates to: AWQLGINKHLRGSWTRVCSRRKL*SRDTFS
Trigger: ACTGAAGGTGTCCCGGGACAAGAGTTTCCTCCTAGA...GCACACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567705.5
ENST00000567987.5
CDS-3UTR CAA 90 bp GGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGAAGCTGGACTCGTGTGTTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCAT +
Preference number: 5 (lower is better)
Translates to: GAWQLGINKHLRGSWTRVLRLFW*CQWPEH
Trigger: ATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA...CACACGAGTCCAGCTTCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CAA 90 bp GTTGTGTCAGTGGCCGGAGCATGGCAGCTGGGCATCAATAAACACCTCCGAGGATTACGCCTTTTCTGGTaGTGTCAGTGGCCGGAGCAT +
Preference number: 5 (lower is better)
Translates to: VVSVAGAWQLGINKHLRGLRLFW*CQWPEH
Trigger: ATGCTCCGGCCACTGACACAACCAGAAAAGGCGTAA...TCCTCGGAGGTGTTTATTGATGCCCAGCTGCCATGCTCCGGCCACTGACACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304516.11
ENST00000562441.5
ENST00000563197.6
ENST00000567987.5
CDS-3UTR CAA 90 bp TCCGGGATGTCGATCACCAGGTCATCGTCTCCATCCAAGGCATCGTCCCCGCTAGAGAAAACGGCAGAGTaGGGATTAGAGCTCCAGATC +
Preference number: 5 (lower is better)
Translates to: SGMSITRSSSPSKASSPLEKTAE*GLELQI
Trigger: GATCTGGAGCTCTAATCCCAACTCTGCCGTTTTCTC...TAGCGGGGACGATGCCTTGGATGGAGACGATGACCTGGTGATCGACATCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS GCA 90 bp GCAGTGGCATCTGAGTCCGAAGAGTCTTCATCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGGAAACTCTTGTCCCGGGACACCTTC +
Preference number: 5 (lower is better)
Translates to: AVASESEESSSTFSY*RSRSRRKLLSRDTF
Trigger: GAAGGTGTCCCGGGACAAGAGTTTCCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGATGAAGACTCTTCGGACTCAGATGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304516.11
ENST00000540562.1
ENST00000562441.5
ENST00000563197.6
ENST00000567065.5
ENST00000567254.5
ENST00000567705.5
ENST00000567987.5
ENST00000568043.5
ENST00000569957.5
ENST00000620599.4
CDS GCA 90 bp AATGTAGATTTCCTAGGAAGCACATCGCCCTCCGCCCCTGCAACGTaGCTCACCTCTTGTCCCGGGACACCTTCAGTAATTTCCTTTGCG +
Preference number: 5 (lower is better)
Translates to: NVDFLGSTSPSAPAT*LTSCPGTPSVISFA
Trigger: CGCAAAGGAAATTACTGAAGGTGTCCCGGGACAAGAGGTGAGGCACGTTGCAGGGGCGGAGGGCGATGTGCTTCCTAGGAAATCTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS GCA 90 bp ACGGGCCGAGCGATTTTCATCCCTTCACTCACATTCTCCGCACAATaGCGCCACTGCTTCTGTCTTCACAGCTATCCTTCCTCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: TGRAIFIPSLTFSAQ*RHCFCLHSYPSSAW
Trigger: CCAAGCAGAGGAAGGATAGCTGTGAAGACAGAAGCAGTGGCGGCATTGTGCGGAGAATGTGAGTGAAGGGATGAAAATCGCTCGGCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540562.1
CDS CCA 90 bp CTTCCCACTATGGCTTCAGCCAGGAATATCCAAATCCACTCACCCTaGGCTTACACGTTCTCCTTGCTGAGGCCTTTCCTGGCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LPTMASARNIQIHSP*AYTFSLLRPFLASP
Trigger: GGGAGAAGCCAGGAAAGGCCTCAGCAAGGAGAACGTGTAAGCCCAGGGTGAGTGGATTTGGATATTCCTGGCTGAAGCCATAGTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 90 bp CCTGTAAGCCGAGACTTCTGTGATCCACCCCTCAGTGCTAAGTGCTaGCTGGGTCCCCAAATTAACTGTTCATGGTTCTCTGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: PVSRDFCDPPLSAKC*LGPQINCSWFSDRP
Trigger: GGGCCTGTCAGAGAACCATGAACAGTTAATTTGGGGACCCAGTCAGCACTTAGCACTGAGGGGTGGATCACAGAAGTCTCGGCTTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 90 bp AGTGAAATGACAACGCTGAGGTCGCATGGTGAGCACTGGAAGAGCTaGGATTCAAAGCTGGCCAAGTCCAACTCAGGCCTGACAGAACCA +
Preference number: 5 (lower is better)
Translates to: SEMTTLRSHGEHWKS*DSKLAKSNSGLTEP
Trigger: TGGTTCTGTCAGGCCTGAGTTGGACTTGGCCAGCTTTGAATCCCAGCTCTTCCAGTGCTCACCATGCGACCTCAGCGTTGTCATTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 90 bp ACTGGAAGAGCTGGGATTCAAAGCTGGCCAAGTCCAACTCAGGCCTaGCAGAACCAACCTGCTTCTGTCTTCACAGCTATCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: TGRAGIQSWPSPTQA*QNQPASVFTAILPL
Trigger: CAGAGGAAGGATAGCTGTGAAGACAGAAGCAGGTTGGTTCTGTCAGGCCTGAGTTGGACTTGGCCAGCTTTGAATCCCAGCTCTTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CCA 90 bp AGCCTAGGAGGCCTAGAGGGTAGCAGAGACCTGCTCAAGGCCACGTaGTTTCTAACAGGCAGTCTTGACTTGACTCTAGATCCCATAATC +
Preference number: 5 (lower is better)
Translates to: SLGGLEGSRDLLKAT*FLTGSLDLTLDPII
Trigger: GATTATGGGATCTAGAGTCAAGTCAAGACTGCCTGTTAGAAACCACGTGGCCTTGAGCAGGTCTCTGCTACCCTCTAGGCCTCCTAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS TCA 90 bp GGACGCTGGAAAGCGCCGTTCCTGACTCTAATGTACTTAGACACTTaGAGCCACAAAAGGATTTATCCCCGAGGTTCCTCATCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: GRWKAPFLTLMYLDT*SHKRIYPRGSSSAR
Trigger: GCGAGCAGATGAGGAACCTCGGGGATAAATCCTTTTGTGGCTTCAAGTGTCTAAGTACATTAGAGTCAGGAACGGCGCTTTCCAGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS TCA 90 bp TCTCAAACCTTCTCTCCAGAATGTCTACAACTTTGCTCCCGGACATaGCTCTGCTTCAGGACTCAGCACCCAGCCAGAAAGCCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: SQTFSPECLQLCSRT*LCFRTQHPARKPQS
Trigger: ACTTTGAGGCTTTCTGGCTGGGTGCTGAGTCCTGAAGCAGAGTCATGTCCGGGAGCAAAGTTGTAGACATTCTGGAGAGAAGGTTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 90 bp GCGATTTTCATCCCTTCACTCACATTCTCCGCACAATGCCGCCACTaGATGGAGAAAGAGAGCTGTGGCTTAAAGAGTGAAATGACAACG +
Preference number: 5 (lower is better)
Translates to: AIFIPSLTFSAQCRH*MEKESCGLKSEMTT
Trigger: CGTTGTCATTTCACTCTTTAAGCCACAGCTCTCTTTCTCCATTCAGTGGCGGCATTGTGCGGAGAATGTGAGTGAAGGGATGAAAATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CCA 72 bp GGGCGTCACCGCACGGGCCGACCTCCCGGGGGACACTaGGACAGGAGCGCGGCAGCCACTGCGCTGGGGATG +
Preference number: 6 (lower is better)
Translates to: GRHRTGRPPGGH*DRSAAATALGM
Trigger: CATCCCCAGCGCAGTGGCTGCCGCGCTCCTGTCCCAGTGTCCCCCGGGAGGTCGGCCCGTGCGGTGACGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS GCA 72 bp CCGTTCATGACCGGCCCGGGAGTGGCGCCCAGAGTCTaGCCTCCCGCTACCCCAAGCAGTGGCTGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: PFMTGPGVAPRV*PPATPSSGCRA
Trigger: GGCACGGCAGCCACTGCTTGGGGTAGCGGGAGGGCAGACTCTGGGCGCCACTCCCGGGCCGGTCATGAACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304516.11
ENST00000380503.7
ENST00000562441.5
ENST00000563197.6
ENST00000567065.5
ENST00000567254.5
ENST00000568043.5
ENST00000569957.5
ENST00000620599.4
CDS CCA 72 bp GGGGACACTGGGACAGGAGCGCGGCAGCCACTGCGCTaGGGATGGCGTAGCAGCGACGCGGTGACGCCACAA +
Preference number: 6 (lower is better)
Translates to: GDTGTGARQPLR*GWRSSDAVTPQ
Trigger: TTGTGGCGTCACCGCGTCGCTGCTACGCCATCCCCAGCGCAGTGGCTGCCGCGCTCCTGTCCCAGTGTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS GCA 72 bp CTGCCGTGCCGCTCCCGCCTCCACTTCCGGAGACGCTaGAAGGCTGTGCCGTCAGGACTACAACTCCCGGCG +
Preference number: 6 (lower is better)
Translates to: LPCRSRLHFRRR*KAVPSGLQLPA
Trigger: CGCCGGGAGTTGTAGTCCTGACGGCACAGCCTTGCAGCGTCTCCGGAAGTGGAGGCGGGAGCGGCACGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS GCA 72 bp AGTCTGCCCTCCCGCTACCCCAAGCAGTGGCTGCCGTaGCGCTCCCGCCTCCACTTCCGGAGACGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SLPSRYPKQWLP*RSRLHFRRRCK
Trigger: CTTGCAGCGTCTCCGGAAGTGGAGGCGGGAGCGGCACGGCAGCCACTGCTTGGGGTAGCGGGAGGGCAGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304516.11
ENST00000620599.4
CDS TCA 72 bp TTTTGTAGTCCACTTCGCCGTCCGCCGGCCCGTTCATaGCCGGCCCGGGAGTGGCGCCCAGAGTCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: FCSPLRRPPARS*PAREWRPESAL
Trigger: GAGGGCAGACTCTGGGCGCCACTCCCGGGCCGGTCATGAACGGGCCGGCGGACGGCGAAGTGGACTACAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000304516.11
ENST00000380503.7
ENST00000540562.1
ENST00000562441.5
ENST00000563040.5
ENST00000563197.6
ENST00000567065.5
ENST00000567254.5
ENST00000567705.5
ENST00000567987.5
ENST00000568043.5
ENST00000569957.5
ENST00000620599.4
CDS GCA 72 bp TGGAAGCACTCGTGCTCCTGTATCACGGGCAAGGGGTaGGCTGGGCCAACGGTCCTCCGTGAAGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: WKHSCSCITGKG*AGPTVLREGPR
Trigger: CCGGGGCCCTTCACGGAGGACCGTTGGCCCAGCGCACCCCTTGCCCGTGATACAGGAGCACGAGTGCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568043.5
CDS CCA 72 bp AAAGCGTCGTTTGCGAGTGTCTCCCTGGCCAGGGCGTaGGCCTCCAGGACGGGAGTGGGGCTCGCATCGCTG +
Preference number: 6 (lower is better)
Translates to: KASFASVSLARA*ASRTGVGLASL
Trigger: CAGCGATGCGAGCCCCACTCCCGTCCTGGAGGCCCACGCCCTGGCCAGGGAGACACTCGCAAACGACGCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563040.5
CDS CCA 72 bp ACTGGGACAGGAGCGCGGCAGCCACTGCGCTGGGGATaGCGTAGCAGCGACGCGGTGACGCCACAAAAATGG +
Preference number: 6 (lower is better)
Translates to: TGTGARQPLRWG*RSSDAVTPQKW
Trigger: CCATTTTTGTGGCGTCACCGCGTCGCTGCTACGCCATCCCCAGCGCAGTGGCTGCCGCGCTCCTGTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS CCA 72 bp GGTCCGCAGCTCCCTCTGGACCCTCTGCCCTTGGCCTaGTTTACCGTGGTGGCCTCCTCACTCCCGTCCCAA +
Preference number: 6 (lower is better)
Translates to: GPQLPLDPLPLA*FTVVASSLPSQ
Trigger: TTGGGACGGGAGTGAGGAGGCCACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540562.1
ENST00000567987.5
ENST00000569957.5
CDS CCA 72 bp CTCTGGACCCTCTGCCCTTGGCCTGGTTTACCGTGGTaGCCTCCTCACTCCCGTCCCAACTCACTCCACCGC +
Preference number: 6 (lower is better)
Translates to: LWTLCPWPGLPW*PPHSRPNSLHR
Trigger: GCGGTGGAGTGAGTTGGGACGGGAGTGAGGAGGCCACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540562.1
ENST00000567987.5
ENST00000569957.5
CDS CCA 72 bp GCGCAGCATGTCCCACCCTGGCCTGGACTTCCTCAGTaGCGTCCTCTCAGCCTGACTGGCAGCGGCTCACAT +
Preference number: 6 (lower is better)
Translates to: AQHVPPWPGLPQ*RPLSLTGSGSH
Trigger: ATGTGAGCCGCTGCCAGTCAGGCTGAGAGGACGCCACTGAGGAAGTCCAGGCCAGGGTGGGACATGCTGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 72 bp GGCCGCTCGCCCCACCCACTTTACACCTGGGTAAACTaGGATCTTGTCCGCGCCAGGCCTCATCCCCCACAG +
Preference number: 6 (lower is better)
Translates to: GRSPHPLYTWVN*DLVRARPHPPQ
Trigger: CTGTGGGGGATGAGGCCTGGCGCGGACAAGATCTCAGTTTACCCAGGTGTAAAGTGGGTGGGGCGAGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568043.5
CDS CCA 72 bp TCCCTCTGGACCCTCTGCCCTTGGCCTGGTTTACCGTaGTGGCCTCCTCACTCCCGTCCCAACTCACTCCAC +
Preference number: 6 (lower is better)
Translates to: SLWTLCPWPGLP*WPPHSRPNSLH
Trigger: GTGGAGTGAGTTGGGACGGGAGTGAGGAGGCCACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540562.1
ENST00000567987.5
ENST00000569957.5
CDS CAA 72 bp CTCCACCGCTCAGTCTGTTCTCTGACCACCAGTGTCTaGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: LHRSVCSLTTSV*SFRGRRGRFSR
Trigger: GCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGACACTGGTGGTCAGAGAACAGACTGAGCGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS CAA 90 bp CCCAACTCACTCCACCGCTCAGTCTGTTCTCTGACCACCAGTGTCTaGAGTTTCCGGGGCAGGCGGGGCCGTTTCTCCCGCTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PNSLHRSVCSLTTSV*SFRGRRGRFSRLGL
Trigger: GAGGCCCAAGCGGGAGAAACGGCCCCGCCTGCCCCGGAAACTCAAGACACTGGTGGTCAGAGAACAGACTGAGCGGTGGAGTGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567987.5
CDS GCA 72 bp TCTCTGAAATGGGTCCGCAGCTCCCTCTGGACCCTCTaGCCTTGGCCTGGTTTACCGTGGTGGCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SLKWVRSSLWTL*PWPGLPWWPPH
Trigger: GTGAGGAGGCCACCACGGTAAACCAGGCCAAGGGCAGAGGGTCCAGAGGGAGCTGCGGACCCATTTCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540562.1
ENST00000567987.5
ENST00000569957.5
CDS CCA 72 bp AGTGCCGCCTGCGGGACGACAGGCAGCCCCTCCCCCTaGGCATCCTGCTCTATTTGTCAGAAGTCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SAACGTTGSPSP*ASCSICQKSCF
Trigger: AAAGCAGGACTTCTGACAAATAGAGCAGGATGCCCAGGGGGAGGGGCTGCCTGTCGTCCCGCAGGCGGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 72 bp TTGCCCGTGACCAGTGAGAAAGGCAGCGTCGCGGGCTaGTTAGGTTTCACCCAAAGGGTGCCGGCGCCGAAT +
Preference number: 6 (lower is better)
Translates to: LPVTSEKGSVAG*LGFTQRVPAPN
Trigger: ATTCGGCGCCGGCACCCTTTGGGTGAAACCTAATCAGCCCGCGACGCTGCCTTTCTCACTGGTCACGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS GCA 72 bp GCCCTAAGTGTCAGCCTCGTCCCCCTGGCGTCCCCATaGTCTGGACCTCGCTCTGTTCTTCTCCACAAGTAC +
Preference number: 6 (lower is better)
Translates to: ALSVSLVPLASP*SGPRSVLLHKY
Trigger: GTACTTGTGGAGAAGAACAGAGCGAGGTCCAGAGCATGGGGACGCCAGGGGGACGAGGCTGACACTTAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 72 bp AGACCCTCCAACTGCCCAGAGAAAACAAGTCTCGTCTaGCAAAGTTCTCGGCCCACGCGGTCCGCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: RPSNCPEKTSLV*QSSRPTRSAAK
Trigger: CTTGGCCGCGGACCGCGTGGGCCGAGAACTTTGCCAGACGAGACTTGTTTTCTCTGGGCAGTTGGAGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS CAA 90 bp GCCCCTCCCCCTGGGCATCCTGCTCTATTTGTCAGAAGTCCTGCTTaGTCCTCTGAGGGTGGGAAGTGGCCTCTGCCCTGCTCAACCCTT +
Preference number: 6 (lower is better)
Translates to: APPPGHPALFVRSPA*SSEGGKWPLPCSTL
Trigger: AAGGGTTGAGCAGGGCAGAGGCCACTTCCCACCCTCAGAGGACAAAGCAGGACTTCTGACAAATAGAGCAGGATGCCCAGGGGGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 72 bp CCTGGCCTGGACTTCCTCAGTGGCGTCCTCTCAGCCTaGCTGGCAGCGGCTCACATTTCTCTGTGGCTTACT +
Preference number: 6 (lower is better)
Translates to: PGLDFLSGVLSA*LAAAHISLWLT
Trigger: AGTAAGCCACAGAGAAATGTGAGCCGCTGCCAGTCAGGCTGAGAGGACGCCACTGAGGAAGTCCAGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS GCA 72 bp TGTAGATTTCCTAGGAAGCACATCGCCCTCCGCCCCTaGAACGTGCCTCACCTCTTGTCCCGGGACACCTTC +
Preference number: 6 (lower is better)
Translates to: CRFPRKHIALRP*NVPHLLSRDTF
Trigger: GAAGGTGTCCCGGGACAAGAGGTGAGGCACGTTGCAGGGGCGGAGGGCGATGTGCTTCCTAGGAAATCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS GCA 72 bp GTCATCGTCTCCATCCAAGGCATCGTCCCCGCTACCTaGATCGCTGAACATCTTGAGTTTCCGGGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: VIVSIQGIVPAT*IAEHLEFPGQA
Trigger: CGCCTGCCCCGGAAACTCAAGATGTTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGGAGACGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562291.2
CDS GCA 72 bp CAGGCCTTCCATGACCCCACCCCACCCGGTTCTTCTTaGCAATTTCTTACCACTCCTGCTCTGGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: QAFHDPTPPGSS*QFLTTPALAQA
Trigger: TGCCTGGGCCAGAGCAGGAGTGGTAAGAAATTGGCAAGAAGAACCGGGTGGGGTGGGGTCATGGAAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CCA 72 bp GGATGGCGTAGCAGCGACGCGGTGACGCCACAAAAATaGCGGACGCTGGAAAGCGCCGTTCCTGACTCTAAT +
Preference number: 6 (lower is better)
Translates to: GWRSSDAVTPQK*RTLESAVPDSN
Trigger: ATTAGAGTCAGGAACGGCGCTTTCCAGCGTCCGCCATTTTTGTGGCGTCACCGCGTCGCTGCTACGCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS CCA 72 bp GTCTCCAAGGCTTCATTCACAGCGAATCCTGCACACTaGCACCTCATGAGCTCCCCCTCTGACCTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: VSKASFTANPAH*HLMSSPSDLLR
Trigger: CCGGAGCAGGTCAGAGGGGGAGCTCATGAGGTGCCAGTGTGCAGGATTCGCTGTGAATGAAGCCTTGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CAA 90 bp AGCGGAGGGCTTCTCTTCCTCTTAGGGGCCGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCGCTGTTATCTGATGATGCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: SGGLLFLLGAGVSDN*GVPSVSLLSDDAVA
Trigger: TGCCACTGCATCATCAGATAACAGCGAGACGGAGGGGACACCCAAGTTGTCTGACACACCGGCCCCTAAGAGGAAGAGAAGCCCTCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000304516.11
ENST00000540562.1
ENST00000562441.5
ENST00000563197.6
ENST00000567065.5
ENST00000567254.5
ENST00000567705.5
ENST00000567987.5
ENST00000569957.5
ENST00000620599.4
CDS CAA 90 bp GTCCCTCCCAGCTGGCCCATCGGATACTTGAAAGAGCCCATGCACTaGTGGCCCTACTCGGGGATGGGGTCCGAATGTAGATTTCCTAGG +
Preference number: 6 (lower is better)
Translates to: VPPSWPIGYLKEPMH*WPYSGMGSECRFPR
Trigger: CCTAGGAAATCTACATTCGGACCCCATCCCCGAGTAGGGCCACAAGTGCATGGGCTCTTTCAAGTATCCGATGGGCCAGCTGGGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS GCA 72 bp TTCCTAGGAAGCACATCGCCCTCCGCCCCTGCAACGTaGCTCACCTCTTGTCCCGGGACACCTTCAGTAATT +
Preference number: 6 (lower is better)
Translates to: FLGSTSPSAPAT*LTSCPGTPSVI
Trigger: AATTACTGAAGGTGTCCCGGGACAAGAGGTGAGGCACGTTGCAGGGGCGGAGGGCGATGTGCTTCCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS GCA 72 bp AGCTCCCCCTCTGACCTGCTCCGGGACCCAATTCCCTaGTTACTTTTCTCCCAAACACAGACTCTGCCCGAC +
Preference number: 6 (lower is better)
Translates to: SSPSDLLRDPIP*LLFSQTQTLPD
Trigger: GTCGGGCAGAGTCTGTGTTTGGGAGAAAAGTAAGCAGGGAATTGGGTCCCGGAGCAGGTCAGAGGGGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 72 bp CTAGATGCTGAGTGGGCTGGCAGGAAACGCCATGCGTaGTCTCCAGTGGCCCTTCTGAGTGTCACATTTGGC +
Preference number: 6 (lower is better)
Translates to: LDAEWAGRKRHA*SPVALLSVTFG
Trigger: GCCAAATGTGACACTCAGAAGGGCCACTGGAGACCACGCATGGCGTTTCCTGCCAGCCCACTCAGCATCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CAA 90 bp CTGGCATCTGCACACCGGGTCCTCCAAGGCTGGTTCTGCCCTGATTaGTCTCCATACAAGCCTGTAAGCCGAGACTTCTGTGATCCACCC +
Preference number: 6 (lower is better)
Translates to: LASAHRVLQGWFCPD*SPYKPVSRDFCDPP
Trigger: GGGTGGATCACAGAAGTCTCGGCTTACAGGCTTGTATGGAGACAAATCAGGGCAGAACCAGCCTTGGAGGACCCGGTGTGCAGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS TCA 72 bp GAATCCTGCACACTGGCACCTCATGAGCTCCCCCTCTaGCCTGCTCCGGGACCCAATTCCCTGCTTACTTTT +
Preference number: 6 (lower is better)
Translates to: ESCTLAPHELPL*PAPGPNSLLTF
Trigger: AAAAGTAAGCAGGGAATTGGGTCCCGGAGCAGGTCAGAGGGGGAGCTCATGAGGTGCCAGTGTGCAGGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS GCA 72 bp CTGGCATCTGCACACCGGGTCCTCCAAGGCTGGTTCTaGCCTGATTTGTCTCCATACAAGCCTGTAAGCCGA +
Preference number: 6 (lower is better)
Translates to: LASAHRVLQGWF*PDLSPYKPVSR
Trigger: TCGGCTTACAGGCTTGTATGGAGACAAATCAGGGCAGAACCAGCCTTGGAGGACCCGGTGTGCAGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 72 bp GGATCCCTGGCATCTGCACACCGGGTCCTCCAAGGCTaGTTCTGCCCTGATTTGTCTCCATACAAGCCTGTA +
Preference number: 6 (lower is better)
Translates to: GSLASAHRVLQG*FCPDLSPYKPV
Trigger: TACAGGCTTGTATGGAGACAAATCAGGGCAGAACCAGCCTTGGAGGACCCGGTGTGCAGATGCCAGGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 72 bp ACAACGCTGAGGTCGCATGGTGAGCACTGGAAGAGCTaGGATTCAAAGCTGGCCAAGTCCAACTCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: TTLRSHGEHWKS*DSKLAKSNSGL
Trigger: CAGGCCTGAGTTGGACTTGGCCAGCTTTGAATCCCAGCTCTTCCAGTGCTCACCATGCGACCTCAGCGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CCA 72 bp CTGTGGGCACAAACTGGGCACCTGCTGTGTGTCAGGTaGTTTCTGTTAATGCCCTCCCAGCCTCAGGACACT +
Preference number: 6 (lower is better)
Translates to: LWAQTGHLLCVR*FLLMPSQPQDT
Trigger: AGTGTCCTGAGGCTGGGAGGGCATTAACAGAAACCACCTGACACACAGCAGGTGCCCAGTTTGTGCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CAA 72 bp AGCTGGCCCATCGGATACTTGAAAGAGCCCATGCACTaGTGGCCCTACTCGGGGATGGGGTCCGAATGTAGA +
Preference number: 6 (lower is better)
Translates to: SWPIGYLKEPMH*WPYSGMGSECR
Trigger: TCTACATTCGGACCCCATCCCCGAGTAGGGCCACAAGTGCATGGGCTCTTTCAAGTATCCGATGGGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS CAA 90 bp ACCTGGGCCACCCTCTCAAACCTTCTCTCCAGAATGTCTACAACTTaGCTCCCGGACATGACTCTGCTTCAGGACTCAGCACCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: TWATLSNLLSRMSTT*LPDMTLLQDSAPSQ
Trigger: CTGGCTGGGTGCTGAGTCCTGAAGCAGAGTCATGTCCGGGAGCAAAGTTGTAGACATTCTGGAGAGAAGGTTTGAGAGGGTGGCCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 72 bp CCAGTACTGTCACCTCTGCTTCTCAGGCTCAAGAGGTaGAGCCTCACAGGGCCAAGGTCACACGGAGAAAAC +
Preference number: 6 (lower is better)
Translates to: PVLSPLLLRLKR*SLTGPRSHGEN
Trigger: GTTTTCTCCGTGTGACCTTGGCCCTGTGAGGCTTCACCTCTTGAGCCTGAGAAGCAGAGGTGACAGTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS GCA 72 bp GAAGCCCCCGAAGAGTCTTCATCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGGAAACTCTTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: EAPEESSSTFSY*RSRSRRKLLSR
Trigger: CCGGGACAAGAGTTTCCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGATGAAGACTCTTCGGGGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563040.5
CDS CAA 90 bp AGAGACCTGCTCAAGGCCACGTGGTTTCTAACAGGCAGTCTTGACTaGACTCTAGATCCCATAATCCTGACCCGGTCTGGGGCTACCTGG +
Preference number: 6 (lower is better)
Translates to: RDLLKATWFLTGSLD*TLDPIILTRSGATW
Trigger: CCAGGTAGCCCCAGACCGGGTCAGGATTATGGGATCTAGAGTCAAGTCAAGACTGCCTGTTAGAAACCACGTGGCCTTGAGCAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 72 bp TGGCCCATCGGATACTTGAAAGAGCCCATGCACTTGTaGCCCTACTCGGGGATGGGGTCCGAATGTAGATTT +
Preference number: 6 (lower is better)
Translates to: WPIGYLKEPMHL*PYSGMGSECRF
Trigger: AAATCTACATTCGGACCCCATCCCCGAGTAGGGCCACAAGTGCATGGGCTCTTTCAAGTATCCGATGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380503.7
CDS CAA 72 bp CTTCTCTTCCTCTTAGGGGCCGGTGTGTCAGACAACTaGGGTGTCCCCTCCGTCTCGCTGTTATCTGATGAT +
Preference number: 6 (lower is better)
Translates to: LLFLLGAGVSDN*GVPSVSLLSDD
Trigger: ATCATCAGATAACAGCGAGACGGAGGGGACACCCAAGTTGTCTGACACACCGGCCCCTAAGAGGAAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000304516.11
ENST00000540562.1
ENST00000562441.5
ENST00000563197.6
ENST00000567065.5
ENST00000567254.5
ENST00000567705.5
ENST00000567987.5
ENST00000569957.5
ENST00000620599.4
CDS GCA 72 bp TCTGAGTCCGAAGAGTCTTCATCCACGTTCTCGTACTaGAGAAGTCGGTCTAGGAGGAAACTCTTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: SESEESSSTFSY*RSRSRRKLLSR
Trigger: CCGGGACAAGAGTTTCCTCCTAGACCGACTTCTGCAGTACGAGAACGTGGATGAAGACTCTTCGGACTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304516.11
ENST00000540562.1
ENST00000562441.5
ENST00000563197.6
ENST00000567065.5
ENST00000567254.5
ENST00000567705.5
ENST00000567987.5
ENST00000568043.5
ENST00000569957.5
ENST00000620599.4
CDS GCA 72 bp TGTGAAGTCTTCCAGAATCCCTCAAGCCCAGTTAACTaGAGGCTCTCCTGGAACGCTCTACTCTCGTCATGG +
Preference number: 6 (lower is better)
Translates to: CEVFQNPSSPVN*RLSWNALLSSW
Trigger: CCATGACGAGAGTAGAGCGTTCCAGGAGAGCCTGCAGTTAACTGGGCTTGAGGGATTCTGGAAGACTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563040.5
CDS CCA 72 bp GTGTCCCCTCCGTCTCGCTGTTATCTGATGATGCAGTaGCATCTGAGTCCGAAGAGTCTTCATCCACGTTCT +
Preference number: 6 (lower is better)
Translates to: VSPPSRCYLMMQ*HLSPKSLHPRS
Trigger: AGAACGTGGATGAAGACTCTTCGGACTCAGATGCCACTGCATCATCAGATAACAGCGAGACGGAGGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000304516.11
ENST00000540562.1
ENST00000562441.5
ENST00000563197.6
ENST00000567065.5
ENST00000567254.5
ENST00000567705.5
ENST00000567987.5
ENST00000568043.5
ENST00000569957.5
ENST00000620599.4
CDS CCA 72 bp GGCCTAGAGGGTAGCAGAGACCTGCTCAAGGCCACGTaGTTTCTAACAGGCAGTCTTGACTTGACTCTAGAT +
Preference number: 6 (lower is better)
Translates to: GLEGSRDLLKAT*FLTGSLDLTLD
Trigger: ATCTAGAGTCAAGTCAAGACTGCCTGTTAGAAACCACGTGGCCTTGAGCAGGTCTCTGCTACCCTCTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 72 bp AGTGAAATGACAACGCTGAGGTCGCATGGTGAGCACTaGAAGAGCTGGGATTCAAAGCTGGCCAAGTCCAAC +
Preference number: 6 (lower is better)
Translates to: SEMTTLRSHGEH*KSWDSKLAKSN
Trigger: GTTGGACTTGGCCAGCTTTGAATCCCAGCTCTTCCAGTGCTCACCATGCGACCTCAGCGTTGTCATTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS CAA 72 bp CTCAAGGCCACGTGGTTTCTAACAGGCAGTCTTGACTaGACTCTAGATCCCATAATCCTGACCCGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: LKATWFLTGSLD*TLDPIILTRSG
Trigger: CCCAGACCGGGTCAGGATTATGGGATCTAGAGTCAAGTCAAGACTGCCTGTTAGAAACCACGTGGCCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CAA 90 bp CGGACGCTGGAAAGCGCCGTTCCTGACTCTAATGTACTTAGACACTaGAAGCCACAAAAGGATTTATCCCCGAGGTTCCTCATCTGCTCG +
Preference number: 6 (lower is better)
Translates to: RTLESAVPDSNVLRH*KPQKDLSPRFLICS
Trigger: CGAGCAGATGAGGAACCTCGGGGATAAATCCTTTTGTGGCTTCAAGTGTCTAAGTACATTAGAGTCAGGAACGGCGCTTTCCAGCGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS TCA 72 bp TTCTCTCCAGAATGTCTACAACTTTGCTCCCGGACATaGCTCTGCTTCAGGACTCAGCACCCAGCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: FSPECLQLCSRT*LCFRTQHPARK
Trigger: CTTTCTGGCTGGGTGCTGAGTCCTGAAGCAGAGTCATGTCCGGGAGCAAAGTTGTAGACATTCTGGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS GCA 72 bp GATTTATCCCCGAGGTTCCTCATCTGCTCGCGAGGATaGCTTTTCTCTTCTGCCTTGCGAAATAACAGCAGC +
Preference number: 6 (lower is better)
Translates to: DLSPRFLICSRG*LFSSALRNNSS
Trigger: GCTGCTGTTATTTCGCAAGGCAGAAGAGAAAAGGCATCCTCGCGAGCAGATGAGGAACCTCGGGGATAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS GCA 72 bp GCGATTTTCATCCCTTCACTCACATTCTCCGCACAATaGCGCCACTGCTTCTGTCTTCACAGCTATCCTTCC +
Preference number: 6 (lower is better)
Translates to: AIFIPSLTFSAQ*RHCFCLHSYPS
Trigger: GGAAGGATAGCTGTGAAGACAGAAGCAGTGGCGGCATTGTGCGGAGAATGTGAGTGAAGGGATGAAAATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540562.1
CDS TCA 72 bp CGAGACTTCTGTGATCCACCCCTCAGTGCTAAGTGCTaGCTGGGTCCCCAAATTAACTGTTCATGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: RDFCDPPLSAKC*LGPQINCSWFS
Trigger: AGAGAACCATGAACAGTTAATTTGGGGACCCAGTCAGCACTTAGCACTGAGGGGTGGATCACAGAAGTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS TCA 72 bp CCCGTCCCAACTCACTCCACCGCTCAGTCTGTTCTCTaGCCACCAGTGTCTGCAATTTTGTTAAGATGCAAT +
Preference number: 6 (lower is better)
Translates to: PVPTHSTAQSVL*PPVSAILLRCN
Trigger: ATTGCATCTTAACAAAATTGCAGACACTGGTGGTCAGAGAACAGACTGAGCGGTGGAGTGAGTTGGGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CAA 72 bp ACCCTCTCAAACCTTCTCTCCAGAATGTCTACAACTTaGCTCCCGGACATGACTCTGCTTCAGGACTCAGCA +
Preference number: 6 (lower is better)
Translates to: TLSNLLSRMSTT*LPDMTLLQDSA
Trigger: TGCTGAGTCCTGAAGCAGAGTCATGTCCGGGAGCAAAGTTGTAGACATTCTGGAGAGAAGGTTTGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS TCA 72 bp ATCCCTTCACTCACATTCTCCGCACAATGCCGCCACTaGATGGAGAAAGAGAGCTGTGGCTTAAAGAGTGAA +
Preference number: 6 (lower is better)
Translates to: IPSLTFSAQCRH*MEKESCGLKSE
Trigger: TTCACTCTTTAAGCCACAGCTCTCTTTCTCCATTCAGTGGCGGCATTGTGCGGAGAATGTGAGTGAAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569957.5
CDS GCA 72 bp CTCCACCGCTCAGTCTGTTCTCTGACCACCAGTGTCTaGAATTTTGTTAAGATGCAATTAGATCACTCCCCC +
Preference number: 6 (lower is better)
Translates to: LHRSVCSLTTSV*NFVKMQLDHSP
Trigger: GGGGGAGTGATCTAATTGCATCTTAACAAAATTGCAGACACTGGTGGTCAGAGAACAGACTGAGCGGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CCA 72 bp ACTTCTGTGATCCACCCCTCAGTGCTAAGTGCTGACTaGGTCCCCAAATTAACTGTTCATGGTTCTCTGACA +
Preference number: 6 (lower is better)
Translates to: TSVIHPSVLSAD*VPKLTVHGSLT
Trigger: TGTCAGAGAACCATGAACAGTTAATTTGGGGACCCAGTCAGCACTTAGCACTGAGGGGTGGATCACAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540562.1
ENST00000569957.5
CDS CAA 72 bp GAAAGCGCCGTTCCTGACTCTAATGTACTTAGACACTaGAAGCCACAAAAGGATTTATCCCCGAGGTTCCTC +
Preference number: 6 (lower is better)
Translates to: ESAVPDSNVLRH*KPQKDLSPRFL
Trigger: GAGGAACCTCGGGGATAAATCCTTTTGTGGCTTCAAGTGTCTAAGTACATTAGAGTCAGGAACGGCGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11
CDS TCA 72 bp AAAGCGCCGTTCCTGACTCTAATGTACTTAGACACTTaGAGCCACAAAAGGATTTATCCCCGAGGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: KAPFLTLMYLDT*SHKRIYPRGSS
Trigger: TGAGGAACCTCGGGGATAAATCCTTTTGTGGCTTCAAGTGTCTAAGTACATTAGAGTCAGGAACGGCGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304516.11