RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INO80D (Homo sapiens)

Ensembl gene IDs: ENSG00000114933

Ensembl transcript IDs: ENST00000403263.6, ENST00000414320.1, ENST00000424117.5, ENST00000635981.1, ENST00000636453.2, ENST00000637545.1

Found 912 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGGAGATTGCCTTACACGTGCACTGCTGACCGATGATGCCCACTaGCCATCACCAGCACCCCTAGGATGCCAAGGCACGGCAAAGACG +
Preference number: 1 (lower is better)
Translates to: RGDCLTRALLTDDAH*PSPAPLGCQGTAKT
Trigger: CGTCTTTGCCGTGCCTTGGCATCCTAGGGGTGCTGGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCACGTGTAAGGCAATCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp AACCTGGAGGAGAGGAGATTGCCTTACACGTGCACTGCTGACCGATaGTGCCCACTGACCATCACCAGCACCCCTAGGATGCCAAGGCAC +
Preference number: 1 (lower is better)
Translates to: NLEERRLPYTCTADR*CPLTITSTPRMPRH
Trigger: GTGCCTTGGCATCCTAGGGGTGCTGGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp CAAGACGTGGTCCTCCCAGCAATGCCGCACCCAATGCCACAAGTATaGCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCATC +
Preference number: 1 (lower is better)
Translates to: QDVVLPAMPHPMPQV*LSTRTGGSYQNLPI
Trigger: GATGGGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAGGACCACGTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp CAATCGCCTCCCAAGACGTGGTCCTCCCAGCAATGCCGCACCCAATaGCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAA +
Preference number: 1 (lower is better)
Translates to: QSPPKTWSSQQCRTQ*HKYACPPELGALTK
Trigger: TTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAGGACCACGTCTTGGGAGGCGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp AGAGGATTCTATGACTCTTCGGGCGGGATGGGTACAGATCATATGTaGGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAAGGC +
Preference number: 1 (lower is better)
Translates to: RGFYDSSGGMGTDHM*VCILRDCGGQTQEG
Trigger: GCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTACCCATCCCGCCCGAAGAGTCATAGAATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp TTCTATGACTCTTCGGGCGGGATGGGTACAGATCATATGTGCGTGTaGATTCTTCGGGACTGTGGTGGGCAGACGCAAGAAGGCGAAAGA +
Preference number: 1 (lower is better)
Translates to: FYDSSGGMGTDHMCV*ILRDCGGQTQEGER
Trigger: TCTTTCGCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTACCCATCCCGCCCGAAGAGTCATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp CGGGATGGGTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTaGTGGGCAGACGCAAGAAGGCGAAAGAGAAGATGGAAAGCTGTG +
Preference number: 1 (lower is better)
Translates to: RDGYRSYVRVHSSGL*WADARRRKRRWKAV
Trigger: CACAGCTTTCCATCTTCTCTTTCGCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTACCCATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp GATGGGTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTaGGCAGACGCAAGAAGGCGAAAGAGAAGATGGAAAGCTGTGCTG +
Preference number: 1 (lower is better)
Translates to: DGYRSYVRVHSSGLW*ADARRRKRRWKAVL
Trigger: CAGCACAGCTTTCCATCTTCTCTTTCGCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTACCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp CACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTaGCCATCTCCTCATCTTGCTCCTACAGTCTGTGCAGAAACAAGT +
Preference number: 1 (lower is better)
Translates to: HKYACPPELGALTKT*PSPHLAPTVCAETS
Trigger: ACTTGTTTCTGCACAGACTGTAGGAGCAAGATGAGGAGATGGGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp TTTAAAGGGAAATTACAAACCAAAAGTCAATCGCCTCCCAAGACGTaGTCCTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGT +
Preference number: 1 (lower is better)
Translates to: FKGKLQTKSQSPPKT*SSQQCRTQCHKYAC
Trigger: ACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAGGACCACGTCTTGGGAGGCGATTGACTTTTGGTTTGTAATTTCCCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp CTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTAGGTCAGAATCTTaGCCTGCCACACACCATTTGCTGTCTCTTATACAGGAACTCAAT +
Preference number: 1 (lower is better)
Translates to: LASLWCLAVGARSES*PATHHLLSLIQELN
Trigger: ATTGAGTTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAGGTCAAGATTCTGACCTAGCACCAACTGCTAAACACCACAGTGAGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp AAGAAACAAGTGAAAGAAGAGGATTCTATGACTCTTCGGGCGGGATaGGTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTG +
Preference number: 1 (lower is better)
Translates to: KKQVKEEDSMTLRAG*VQIICACAFFGTVV
Trigger: CACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTACCCATCCCGCCCGAAGAGTCATAGAATCCTCTTCTTTCACTTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp TCAGCACTAATCCACTGGAGCCAACTGTACCTTAATGATGCAGGTTaGAGTCATTTTAGGGCAAATCAGTCTATTCCCCCAGGTAGAACC +
Preference number: 1 (lower is better)
Translates to: SALIHWSQLYLNDAG*SHFRANQSIPPGRT
Trigger: GGTTCTACCTGGGGGAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTTGGCTCCAGTGGATTAGTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp GTTCATATACTCATCTTTTTGCAATACCAACCCATAGCGACCTTCTaGACTAACCTGGAGGAGAGGAGATTGCCTTACACGTGCACTGCT +
Preference number: 1 (lower is better)
Translates to: VHILIFLQYQPIATF*TNLEERRLPYTCTA
Trigger: AGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCAGGTTAGTTCAGAAGGTCGCTATGGGTTGGTATTGCAAAAAGATGAGTATATGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp CACGACTTTCCCTTCCTTGTCAAAGGGCTGATGAGGAAGTCAATGTaGTGCTCTGCGACAACCTTTAAATACACAATGGAGACTAAACTG +
Preference number: 1 (lower is better)
Translates to: HDFPFLVKGLMRKSM*CSATTFKYTMETKL
Trigger: CAGTTTAGTCTCCATTGTGTATTTAAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCATCAGCCCTTTGACAAGGAAGGGAAAGTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp CTGCCCATCTCCTCATCTTGCTCCTACAGTCTGTGCAGAAACAAGTaGCTCCTAACTTTTGTGCATATAATTAAACTCCCAGCCACTATG +
Preference number: 1 (lower is better)
Translates to: LPISSSCSYSLCRNK*LLTFVHIIKLPATM
Trigger: CATAGTGGCTGGGAGTTTAATTATATGCACAAAAGTTAGGAGCCACTTGTTTCTGCACAGACTGTAGGAGCAAGATGAGGAGATGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp GACTTTCCCTTCCTTGTCAAAGGGCTGATGAGGAAGTCAATGTGCTaGTCTGCGACAACCTTTAAATACACAATGGAGACTAAACTGAAC +
Preference number: 1 (lower is better)
Translates to: DFPFLVKGLMRKSMC*SATTFKYTMETKLN
Trigger: GTTCAGTTTAGTCTCCATTGTGTATTTAAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCATCAGCCCTTTGACAAGGAAGGGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp AGACGCAAGAAGGCGAAAGAGAAGATGGAAAGCTGTGCTGCCCTATaGAGCTCACTGAGAGTTAGATTTTTCTCTTATACGAGTATTGAT +
Preference number: 1 (lower is better)
Translates to: RRKKAKEKMESCAAL*SSLRVRFFSYTSID
Trigger: ATCAATACTCGTATAAGAGAAAAATCTAACTCTCAGTGAGCTCCATAGGGCAGCACAGCTTTCCATCTTCTCTTTCGCCTTCTTGCGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp ATGTCAACAAGTGTCAGACTTCCCATCATTTCAGCACTAATCCACTaGAGCCAACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGG +
Preference number: 1 (lower is better)
Translates to: MSTSVRLPIISALIH*SQLYLNDAGWSHFR
Trigger: CCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTTGGCTCCAGTGGATTAGTGCTGAAATGATGGGAAGTCTGACACTTGTTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp TGTGCTGCTCTGCGACAACCTTTAAATACACAATGGAGACTAAACTaGACTGCTGGGAATGGACAGTTATCTAGTTATGCTTATGATGGT +
Preference number: 1 (lower is better)
Translates to: CAALRQPLNTQWRLN*TAGNGQLSSYAYDG
Trigger: ACCATCATAAGCATAACTAGATAACTGTCCATTCCCAGCAGTTCAGTTTAGTCTCCATTGTGTATTTAAAGGTTGTCGCAGAGCAGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp TCCAACCTGTCTCATTTGCTGGTTTCAAATAAGCTACCTCACCTTTaGTTTCCCACTGCAACTTGGTTTCAACTTACACTTCAGTACTCT +
Preference number: 1 (lower is better)
Translates to: SNLSHLLVSNKLPHL*FPTATWFQLTLQYS
Trigger: AGAGTACTGAAGTGTAAGTTGAAACCAAGTTGCAGTGGGAAATCAAAGGTGAGGTAGCTTATTTGAAACCAGCAAATGAGACAGGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp AACCACCTATGTAAAAACCTGGCAACAGAATGGAAAGCACTGATCTaGATACTAGGAAATAGTAAAGGGCACTGGTATTCTGAGGTATCT +
Preference number: 1 (lower is better)
Translates to: NHLCKNLATEWKALI*ILGNSKGHWYSEVS
Trigger: AGATACCTCAGAATACCAGTGCCCTTTACTATTTCCTAGTATTCAGATCAGTGCTTTCCATTCTGTTGCCAGGTTTTTACATAGGTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp CCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCACTGTTaGGAGGAACAGATTCAACCCTTCCAAACAGATGAAGACAATGTC +
Preference number: 1 (lower is better)
Translates to: PETYSILYSEKNYHC*EEQIQPFQTDEDNV
Trigger: GACATTGTCTTCATCTGTTTGGAAGGGTTGAATCTGTTCCTCTCAACAGTGATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp GAGAAAAAGCCCATCTTTTCTTCAGATACTACTGATCATAGCCAGTaGATATCACACATTAGAATGGAATTCAGATTCTCAGAGCACAGA +
Preference number: 1 (lower is better)
Translates to: EKKPIFSSDTTDHSQ*ISHIRMEFRFSEHR
Trigger: TCTGTGCTCTGAGAATCTGAATTCCATTCTAATGTGTGATATTCACTGGCTATGATCAGTAGTATCTGAAGAAAAGATGGGCTTTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 90 bp TGTAACATCTTACAATTTAGGATTGTCCATCTACCTTCCTCTCTCTaGAAGTTCTTGAGATGTAATCTGCTGCCAACTCTTCACAAAATA +
Preference number: 1 (lower is better)
Translates to: CNILQFRIVHLPSSL*KFLRCNLLPTLHKI
Trigger: TATTTTGTGAAGAGTTGGCAGCAGATTACATCTCAAGAACTTGCAGAGAGAGGAAGGTAGATGGACAATCCTAAATTGTAAGATGTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 90 bp TCATTATTTATTAATGAAAGGAGGAGGCAAATTGGTGAATTAAGTTaGTCTAGGAGATGGTGGCTGACATACACTAACGGAAATATTAGG +
Preference number: 1 (lower is better)
Translates to: SLFINERRRQIGELS*SRRWWLTYTNGNIR
Trigger: CCTAATATTTCCGTTAGTGTATGTCAGCCACCATCTCCTAGATCAACTTAATTCACCAATTTGCCTCCTCCTTTCATTAATAAATAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 90 bp TTTCATCATGGGCATCCAAACGAAAATGTATTTACTCAAAGTTTTTaGTGTGAAGCTGTAACTAGCAACATTCCTGATAATTTCATGCCT +
Preference number: 1 (lower is better)
Translates to: FHHGHPNENVFTQSF*CEAVTSNIPDNFMP
Trigger: AGGCATGAAATTATCAGGAATGTTGCTAGTTACAGCTTCACACCAAAAACTTTGAGTAAATACATTTTCGTTTGGATGCCCATGATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTGCACTGCTGACCGATaGTGCCCACTGACCATCACC +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGCTADR*CPLTIT
Trigger: GGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTCTTCGGGACTGTGGTaGGCAGACGCAAGAAGGCGA +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSSGLW*ADARRR
Trigger: TCGCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCAACTGCCACTGCAGTaGCAATATTCCAGTAGGGGC +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGQLPLQ*QYSSRG
Trigger: GCCCCTACTGGAATATTGTCACTGCAGTGGCAGTTG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACATCCCTACCTCACTaGCGGGAATCCAAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTSLPH*RESKLS
Trigger: AGAAAGCTTGGATTCCCGTCAGTGAGGTAGGGATGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCCCATCTCCTCATCTTaGTCCTACAGTCTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGPISSS*SYSLCR
Trigger: TCTGCACAGACTGTAGGAGCAAGATGAGGAGATGGG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGTCAGAATCTTGACCTaGCACACACCATTTGCTGTC +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGVRILT*HTPFAV
Trigger: GACAGCAAATGGTGTGTGGCAGGTCAAGATTCTGAC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCGAGGTAACTACTCGTaGCCACTTCATTACAGTACA +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGRGNYS*PLHYST
Trigger: TGTACTGTAATGAAGTGGTCACGAGTAGTTACCTCG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTGCACTGCTGACCGATaGTGCCCACTGACCATCACC +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCCTADR*CPLTIT
Trigger: GGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCTCTCTGCAAGTTCTTaGGATGTAATCTGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGLSASS*DVICCQ
Trigger: TTGGCAGCAGATTACATCTCAAGAACTTGCAGAGAG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAGCTGCTTCCTGCACTaGACAAAAACACACGCGTGG +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASCFLH*TKTHAW
Trigger: CCACGCGTGTGTTTTTGTGCAGTGCAGGAAGCAGCT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGGGACAGCTGCTTCCTaGACTGCACAAAAACACACG +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAGTAAS*TAQKHT
Trigger: CGTGTGTTTTTGTGCAGTGCAGGAAGCAGCTGTCCC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTGGAGGAGAGGAGATTaGCTTACACGTGCACTGCTG +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKWRRGD*LTRALL
Trigger: CAGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAACACAGCTCATGTCTaGGGCTGTCTGTCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPANTAHV*GCLSPS
Trigger: AGAGGGAGACAGACAGCCCCAGACATGAGCTGTGTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAAACAGTCTGGTCTGTaGAACATCTCCACTTCAGAG +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGKQSGL*NISTSE
Trigger: CTCTGAAGTGGAGATGTTCCACAGACCAGACTGTTT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTTTCATACAGTCATGTaGCATTTCCCCTCCATAACC +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGFHTVM*HFPSIT
Trigger: GGTTATGGAGGGGAAATGTCACATGACTGTATGAAA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACTGTGATCACAGATTaGGAACAAGCTCTGATAAGG +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTVITD*EQALIR
Trigger: CCTTATCAGAGCTTGTTCTCAATCTGTGATCACAGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCCCTATGGAGCTCACTaGGAGTTAGATTTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGPYGAH*ELDFSL
Trigger: AAGAGAAAAATCTAACTCTCAGTGAGCTCCATAGGG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACCCTTCCAAACAGATaGAGACAATGTCAACAAGTG +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTLPNR*RQCQQV
Trigger: CACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACAAAGCTCCTCAAGTaGATCTCCAGCTCTTTCTTA +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTKLLK*ISSSFL
Trigger: TAAGAAAGAGCTGGAGATTCACTTGAGGAGCTTTGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGTTAAAGGCTACTTCTaGTATCAGGTTCCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGVKGYF*YQVPAK
Trigger: CTTAGCTGGAACCTGATATCAGAAGTAGCCTTTAAC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCACCACTGGGGCGGAGTaGGCCTGCCAGGAGGGAATG +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPITTGAE*ACQEGM
Trigger: CATTCCCTCCTGGCAGGCCCACTCCGCCCCAGTGGT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCAATGGAGACTAAACTaGACTGCTGGGAATGGACAG +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKQWRLN*TAGNGQ
Trigger: CTGTCCATTCCCAGCAGTTCAGTTTAGTCTCCATTG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACTGCAGAAACAGAGTaGAACTTCTTTGCCACTATT +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTAETE*NFFATI
Trigger: AATAGTGGCAAAGAAGTTTCACTCTGTTTCTGCAGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCACTGCCTGCCAACATaGAATTGCTCAGGAAGTCAT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAHCLPT*NCSGSH
Trigger: ATGACTTCCTGAGCAATTTCATGTTGGCAGGCAGTG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCACTGCCTGCCAACATaGAATTGCTCAGGAAGTCAT +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKHCLPT*NCSGSH
Trigger: ATGACTTCCTGAGCAATTTCATGTTGGCAGGCAGTG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTGCCACTGTGGACTGTaGTCACAGATTGAGAACAAG +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKCHCGL*SQIENK
Trigger: CTTGTTCTCAATCTGTGATCACAGTCCACAGTGGCA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTCCACAAGGAATCCCTaGGACATACTCAATACTATA +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSTRNP*DILNTI
Trigger: TATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGGTACAGATCATATGTaGGTGTGCATTCTTCGGGAC +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAGTDHM*VCILRD
Trigger: GTCCCGAAGAATGCACACGCACATATGATCTGTACC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAAGAAGAAAACCGTATaGACAGGGCACCTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAKKKTV*TGHLCA
Trigger: TGCACAGAGGTGCCCTGTCCATACGGTTTTCTTCTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCCTTCTGAACTAACCTaGAGGAGAGGAGATTGCCTT +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKPSELT*RRGDCL
Trigger: AAGGCAATCTCCTCTCCTCCAGGTTAGTTCAGAAGG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAGGCGAAAGAGAAGATaGAAAGCTGTGCTGCCCTAT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPARRKRR*KAVLPY
Trigger: ATAGGGCAGCACAGCTTTCCATCTTCTCTTTCGCCT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCCTATTCAGGAAACTTaGGGAAAAGAAGGACCAACC +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKPIQET*GKEGPT
Trigger: GGTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCAAAAGAGATACAAATaGGGACTGTTCAGTATGATG +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGQKRYK*GLFSMM
Trigger: CATCATACTGAACAGTCCTCATTTGTATCTCTTTTG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTGCTTGCTCTCTCTCTaGAACGTCACATTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPACLLSL*NVTFPL
Trigger: AAGAGGAAATGTGACGTTTCAGAGAGAGAGCAAGCA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAACTCCCAGCCACTATaGACACAAATACAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPANSQPL*TQIQRR
Trigger: TCTCCTCTGTATTTGTGTTCATAGTGGCTGGGAGTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCTGCCACACACCATTTaGTGTCTCTTATACAGGAAC +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPALPHTI*CLLYRN
Trigger: GTTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAGAACCCCGGCAGCCTaGAGTCATCCCAGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIRTPAA*SHPRQA
Trigger: AGCTTGCCTGGGATGACTGCAGGCTGCCGGGGTTCT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGATGAGGAAGTCAATGTaGTGCTCTGCGACAACCTTT +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKMRKSM*CSATTF
Trigger: AAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCAT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCCTCACTTTCCAACTTaGTCCCCATGCCTACTATTT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAPHFPT*SPCLLF
Trigger: AAATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCCTCACTTTCCAACTTaGTCCCCATGCCTACTATTT +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKPHFPT*SPCLLF
Trigger: AAATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAAGGGGAACTTTGGGTaGATACAGAGCTTACTTCAG +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAKGNFG*IQSLLQ
Trigger: CTGAAGTAAGCTCTGTATGCACCCAAAGTTCCCCTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGATTGCCTCATTAAACTaGAGAGTTCTGTTGACCATT +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGIASLN*RVLLTI
Trigger: AATGGTCAACAGAACTCTCCAGTTTAATGAGGCAAT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAGCTGTGCTGCCCTATaGAGCTCACTGAGAGTTAGA +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSCAAL*SSLRVR
Trigger: TCTAACTCTCAGTGAGCTCCATAGGGCAGCACAGCT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 90 bp GTGCTACTCACACGACCAGTCCACCACCCTCCCTATTCAGGAAACTaGAGGAAAAGAAGGACCAACCTTATTAGGACTGTGAGATGTAGG +
Preference number: 2 (lower is better)
Translates to: VLLTRPVHHPPYSGN*RKRRTNLIRTVRCR
Trigger: CCTACATCTCACAGTCCTAATAAGGTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGGGAGGGTGGTGGACTGGTCGTGTGAGTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTATCTCAAGGGACAGTaGAACTACTCAGCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAYLKGQ*NYSAKA
Trigger: TGCTTTTGCTGAGTAGTTTCACTGTCCCTTGAGATA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAAATCACCCCAGCTTTaGAATATGCACGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAKSPQL*NMHGEM
Trigger: CATTTCACCGTGCATATTTCAAAGCTGGGGTGATTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCAAGAGGCTAACATGTaGCCTTGTATGCTTTCCATT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAQEANM*PCMLSI
Trigger: AATGGAAAGCATACAAGGTCACATGTTAGCCTCTTG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGAGACTAAACTGAACTaGTGGGAATGGACAGTTATC +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAETKLN*WEWTVI
Trigger: GATAACTGTCCATTCCCAGCAGTTCAGTTTAGTCTC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAGGAAGTCAATGTGCTaGTCTGCGACAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKRKSMC*SATTFK
Trigger: TTTAAAGGTTGTCGCAGAGCAGCACATTGACTTCCT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCATACCCAATTTGCTTaGTCTCTCTCTGAAACGTCA +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAHTQFA*SLSETS
Trigger: TGACGTTTCAGAGAGAGAGCAAGCAAATTGGGTATG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGATCATATGTGCGTGTaGATTCTTCGGGACTGTGGT +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCDHMCV*ILRDCG
Trigger: ACCACAGTCCCGAAGAATGCACACGCACATATGATC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTGGTTAGAACTAGCATaGCATAAAGAGATTACATAC +
Preference number: 2 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGWLELA*HKEITY
Trigger: GTATGTAATCTCTTTATGCCATGCTAGTTCTAACCA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCCTCAGCTTTCATCATaGGCATCCAAACGAAAATGT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAPQLSS*ASKRKC
Trigger: ACATTTTCGTTTGGATGCCCATGATGAAAGCTGAGG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAGGCGAAAGAGAAGATaGAAAGCTGTGCTGCCCTAT +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCRRKRR*KAVLPY
Trigger: ATAGGGCAGCACAGCTTTCCATCTTCTCTTTCGCCT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTCAGCACTAATCCACTaGAGCCAACTGTACCTTAAT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASALIH*SQLYLN
Trigger: ATTAAGGTACAGTTGGCTCCAGTGGATTAGTGCTGA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCATCCAGTCACTGTGCTaGACCACTAAGGAAACCACT +
Preference number: 2 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCIQSLC*TTKETT
Trigger: AGTGGTTTCCTTAGTGGTTCAGCACAGTGACTGGAT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCCTATTCAGGAAACTTaGGGAAAAGAAGGACCAACC +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCPIQET*GKEGPT
Trigger: GGTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTCACAACTGGTACACTaGTTCTACAAGTGTCTTAAC +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKSQLVH*FYKCLN
Trigger: GTTAAGACACTTGTAGAATCAGTGTACCAGTTGTGA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTTACACGTGCACTGCTaGCCGATGATGCCCACTGAC +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPILHVHC*PMMPTD
Trigger: GTCAGTGGGCATCATCGGTCAGCAGTGCACGTGTAA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCTGCCACACACCATTTaGTGTCTCTTATACAGGAAC +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCLPHTI*CLLYRN
Trigger: GTTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCTACCTTCCTCTCTCTaGAAGTTCTTGAGATGTAAT +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPALPSSL*KFLRCN
Trigger: ATTACATCTCAAGAACTTGCAGAGAGAGGAAGGTAG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAACCACTGGGGCGGAGTaGGCCTGCCAGGAGGGAATG +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILTTGAE*ACQEGM
Trigger: CATTCCCTCCTGGCAGGCCCACTCCGCCCCAGTGGT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTTTCCCACTGCAACTTaGTTTCAACTTACACTTCAG +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAFPTAT*FQLTLQ
Trigger: CTGAAGTGTAAGTTGAAACCAAGTTGCAGTGGGAAA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTGCAAATGTATTCCATaGGAGAGGGATTTAGAAACA +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPACKCIP*ERDLET
Trigger: TGTTTCTAAATCCCTCTCTCATGGAATACATTTGCA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCTTTTCAAATCTATCTaGCCTATCCTGCTTTTTCAC +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKLFKSI*PILLFH
Trigger: GTGAAAAAGCAGGATAGGTCAGATAGATTTGAAAAG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGATGGATCAAGGAGTTaGCAGATCCCATCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCDGSRS*QIPSFQ
Trigger: TTGAAAAGATGGGATCTGTCAACTCCTTGATCCATC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCAAAAGAGATACAAATaGGGACTGTTCAGTATGATG +
Preference number: 2 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAQKRYK*GLFSMM
Trigger: CATCATACTGAACAGTCCTCATTTGTATCTCTTTTG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAGCTGCTTCCTGCACTaGACAAAAACACACGCGTGG +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISCFLH*TKTHAW
Trigger: CCACGCGTGTGTTTTTGTGCAGTGCAGGAAGCAGCT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGAGAAAATAATCCTTTaGTGTCTAAGCTATGTGACG +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKEKIIL*CLSYVT
Trigger: CGTCACATAGCTTAGACAGCAAAGGATTATTTTCTC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCATACCCAATTTGCTTaGTCTCTCTCTGAAACGTCA +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCHTQFA*SLSETS
Trigger: TGACGTTTCAGAGAGAGAGCAAGCAAATTGGGTATG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGATGGAAAGCTGTGCTaGCCTATGGAGCTCACTGAG +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIDGKLC*PMELTE
Trigger: CTCAGTGAGCTCCATAGGGCAGCACAGCTTTCCATC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGACTCTTCGGGCGGGATaGGTACAGATCATATGTGCG +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVTLRAG*VQIICA
Trigger: CGCACATATGATCTGTACCCATCCCGCCCGAAGAGT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGCTAGGTCAGAATCTTaGCCTGCCACACACCATTTG +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIARSES*PATHHL
Trigger: CAAATGGTGTGTGGCAGGTCAAGATTCTGACCTAGC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTCACAACTGGTACACTaGTTCTACAAGTGTCTTAAC +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSQLVH*FYKCLN
Trigger: GTTAAGACACTTGTAGAATCAGTGTACCAGTTGTGA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTTACACGTGCACTGCTaGCCGATGATGCCCACTGAC +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFLHVHC*PMMPTD
Trigger: GTCAGTGGGCATCATCGGTCAGCAGTGCACGTGTAA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCCCATAGCGACCTTCTaGACTAACCTGGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFPIATF*TNLEER
Trigger: CCTCTCCTCCAGGTTAGTTCAGAAGGTCGCTATGGG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAGAACCCCGGCAGCCTaGAGTCATCCCAGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILRTPAA*SHPRQA
Trigger: AGCTTGCCTGGGATGACTGCAGGCTGCCGGGGTTCT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCAGGCACGTGGTATCTaGATAATGCCTGCTGATCAC +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIQARGI*IMPADH
Trigger: GTGATCAGCAGGCATTATGCAGATACCACGTGCCTG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCACCTATGTAAAAACCTaGCAACAGAATGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCTYVKT*QQNGKH
Trigger: GTGCTTTCCATTCTGTTGCCAGGTTTTTACATAGGT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTCAAAAGCAAAAGATaGATCAAGGAGTTGACAGAT +
Preference number: 2 (lower is better)
Translates to: VQIICACAFFGTVVGRRKFKSKR*IKELTD
Trigger: ATCTGTCAACTCCTTGATCCATCTTTTGCTTTTGAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAGCTGTGCTGCCCTATaGAGCTCACTGAGAGTTAGA +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVSCAAL*SSLRVR
Trigger: TCTAACTCTCAGTGAGCTCCATAGGGCAGCACAGCT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCATTCTTCGGGACTGTaGTGGGCAGACGCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFHSSGL*WADARR
Trigger: CCTTCTTGCGTCTGCCCACCACAGTCCCGAAGAATG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCAATGGAGACTAAACTaGACTGCTGGGAATGGACAG +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVQWRLN*TAGNGQ
Trigger: CTGTCCATTCCCAGCAGTTCAGTTTAGTCTCCATTG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTGCCACTGTGGACTGTaGTCACAGATTGAGAACAAG +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVCHCGL*SQIENK
Trigger: CTTGTTCTCAATCTGTGATCACAGTCCACAGTGGCA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATACCGATGATGCCCACTaGCCATCACCAGCACCCCTA +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYTDDAH*PSPAPL
Trigger: TAGGGGTGCTGGTGATGGTCAGTGGGCATCATCGGT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAGCAGAAAAAGGTTGTaGTACTCACACGACCAGTCC +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISRKRL*YSHDQS
Trigger: GGACTGGTCGTGTGAGTAGCACAACCTTTTTCTGCT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAGGAATCCTCTAAATTaGCTCATTAAACTGGAGAGT +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCRNPLN*LIKLES
Trigger: ACTCTCCAGTTTAATGAGGCAATTTAGAGGATTCCT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGATGGAAAGCTGTGCTaGCCTATGGAGCTCACTGAG +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFDGKLC*PMELTE
Trigger: CTCAGTGAGCTCCATAGGGCAGCACAGCTTTCCATC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGATCATATGTGCGTGTaGATTCTTCGGGACTGTGGT +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIDHMCV*ILRDCG
Trigger: ACCACAGTCCCGAAGAATGCACACGCACATATGATC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAAAGATAGAAAACACTaGGTTCCCCACCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVKDRKH*VPHLPA
Trigger: TGCAGGCAGGTGGGGAACCCAGTGTTTTCTATCTTT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAAAGATAGAAAACACTaGGTTCCCCACCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIKDRKH*VPHLPA
Trigger: TGCAGGCAGGTGGGGAACCCAGTGTTTTCTATCTTT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCCTTCTGAACTAACCTaGAGGAGAGGAGATTGCCTT +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIPSELT*RRGDCL
Trigger: AAGGCAATCTCCTCTCCTCCAGGTTAGTTCAGAAGG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTCTTCGGGACTGTGGTaGGCAGACGCAAGAAGGCGA +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSSGLW*ADARRR
Trigger: TCGCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 90 bp AGAAGGGCTTTGAGAACCGCTAGTCCTTGCTACCGTGCAGTTTCTTaGTTAGAAGAGATTTTAAAACTGTCCAACCTGTCTCATTTGCTG +
Preference number: 2 (lower is better)
Translates to: RRALRTASPCYRAVS*LEEILKLSNLSHLL
Trigger: CAGCAAATGAGACAGGTTGGACAGTTTTAAAATCTCTTCTAACAAAGAAACTGCACGGTAGCAAGGACTAGCGGTTCTCAAAGCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCCCATAGCGACCTTCTaGACTAACCTGGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYPIATF*TNLEER
Trigger: CCTCTCCTCCAGGTTAGTTCAGAAGGTCGCTATGGG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGATGAGGAAGTCAATGTaGTGCTCTGCGACAACCTTT +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVMRKSM*CSATTF
Trigger: AAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCAT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGATCACAATTACGAATaGAATCCTGGCCTCACTGTG +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIDHNYE*NPGLTV
Trigger: CACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTGGTTAGAACTAGCATaGCATAAAGAGATTACATAC +
Preference number: 2 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCWLELA*HKEITY
Trigger: GTATGTAATCTCTTTATGCCATGCTAGTTCTAACCA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTTCCAAGGGGAACTTTaGGTGCATACAGAGCTTACT +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIFQGEL*VHTELT
Trigger: AGTAAGCTCTGTATGCACCCAAAGTTCCCCTTGGAA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGATGGATCAAGGAGTTaGCAGATCCCATCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIDGSRS*QIPSFQ
Trigger: TTGAAAAGATGGGATCTGTCAACTCCTTGATCCATC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTATCTCAAGGGACAGTaGAACTACTCAGCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVYLKGQ*NYSAKA
Trigger: TGCTTTTGCTGAGTAGTTTCACTGTCCCTTGAGATA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAAGAAGAGGATTCTATaGCTCTTCGGGCGGGATGGG +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYKKRIL*LFGRDG
Trigger: CCCATCCCGCCCGAAGAGTCATAGAATCCTCTTCTT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTTCTGCACTGCGTGTTaGAAATTTTTCCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVFCTAC*KFFQGE
Trigger: TTCCCCTTGGAAAAATTTTCAACACGCAGTGCAGAA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTATATGCACGGTGAAATaGTCCCACCAACTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIICTVK*SHQLLK
Trigger: TTTAAGGAGTTGGTGGGATCATTTCACCGTGCATAT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGGGACAGCTGCTTCCTaGACTGCACAAAAACACACG +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYGTAAS*TAQKHT
Trigger: CGTGTGTTTTTGTGCAGTGCAGGAAGCAGCTGTCCC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTGGAGCCTTCTGCACTaGGTGTTGAAAATTTTTCCA +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIWSLLH*VLKIFP
Trigger: TGGAAAAATTTTCAACACGCAGTGCAGAAGGCTCCA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAAGAAGAAAACCGTATaGACAGGGCACCTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFKKKTV*TGHLCA
Trigger: TGCACAGAGGTGCCCTGTCCATACGGTTTTCTTCTT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATACTCTTCGGGCGGGATaGGTACAGATCATATGTGCG +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYTLRAG*VQIICA
Trigger: CGCACATATGATCTGTACCCATCCCGCCCGAAGAGT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGCTAGGTCAGAATCTTaGCCTGCCACACACCATTTG +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYARSES*PATHHL
Trigger: CAAATGGTGTGTGGCAGGTCAAGATTCTGACCTAGC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAACATCCCTACCTCACTaGCGGGAATCCAAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILTSLPH*RESKLS
Trigger: AGAAAGCTTGGATTCCCGTCAGTGAGGTAGGGATGT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCGAGGTAACTACTCGTaGCCACTTCATTACAGTACA +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFRGNYS*PLHYST
Trigger: TGTACTGTAATGAAGTGGTCACGAGTAGTTACCTCG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGACTGCAGAAACAGAGTaGAACTTCTTTGCCACTATT +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVTAETE*NFFATI
Trigger: AATAGTGGCAAAGAAGTTTCACTCTGTTTCTGCAGT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGCTTGCTCTCTCTCTaGAACGTCACATTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFCLLSL*NVTFPL
Trigger: AAGAGGAAATGTGACGTTTCAGAGAGAGAGCAAGCA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCAGGCACGTGGTATCTaGATAATGCCTGCTGATCAC +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYQARGI*IMPADH
Trigger: GTGATCAGCAGGCATTATGCAGATACCACGTGCCTG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGATTCAATAGATCTGTaGTCCCATCACCACAATAGA +
Preference number: 2 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIDSIDL*SHHHNR
Trigger: TCTATTGTGGTGATGGGACCACAGATCTATTGAATC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCTTTTCAAATCTATCTaGCCTATCCTGCTTTTTCAC +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVLFKSI*PILLFH
Trigger: GTGAAAAAGCAGGATAGGTCAGATAGATTTGAAAAG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGCAGAAAAAGGTTGTaGTACTCACACGACCAGTCC +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSRKRL*YSHDQS
Trigger: GGACTGGTCGTGTGAGTAGCACAACCTTTTTCTGCT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAGGAATCCTCTAAATTaGCTCATTAAACTGGAGAGT +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVRNPLN*LIKLES
Trigger: ACTCTCCAGTTTAATGAGGCAATTTAGAGGATTCCT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGGTACAGATCATATGTaGGTGTGCATTCTTCGGGAC +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYGTDHM*VCILRD
Trigger: GTCCCGAAGAATGCACACGCACATATGATCTGTACC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGGAGCCTTCTGCACTaGGTGTTGAAAATTTTTCCA +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFWSLLH*VLKIFP
Trigger: TGGAAAAATTTTCAACACGCAGTGCAGAAGGCTCCA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCACATCACTTCACAACTaGTACACTGATTCTACAAGT +
Preference number: 2 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPITSLHN*YTDSTS
Trigger: ACTTGTAGAATCAGTGTACCAGTTGTGAAGTGATGT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCCTCAGCTTTCATCATaGGCATCCAAACGAAAATGT +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFPQLSS*ASKRKC
Trigger: ACATTTTCGTTTGGATGCCCATGATGAAAGCTGAGG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCTTAATGATGCAGGTTaGAGTCATTTTAGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVLNDAG*SHFRAN
Trigger: ATTTGCCCTAAAATGACTCCAACCTGCATCATTAAG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 90 bp TTCAGTACTCTAGTTGTTAGTACCATACAATTGCCAAGAGGCTTTTaGTTAAAGGCTACTTCTGATATCAGGTTCCAGCTAAGCTACTCA +
Preference number: 2 (lower is better)
Translates to: FSTLVVSTIQLPRGF*LKATSDIRFQLSYS
Trigger: TGAGTAGCTTAGCTGGAACCTGATATCAGAAGTAGCCTTTAACAAAAAGCCTCTTGGCAATTGTATGGTACTAACAACTAGAGTACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCACCTATGTAAAAACCTaGCAACAGAATGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: NCTLMMQVGVILGQISLFTYVKT*QQNGKH
Trigger: GTGCTTTCCATTCTGTTGCCAGGTTTTTACATAGGT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGATCACAATTACGAATaGAATCCTGGCCTCACTGTG +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILDHNYE*NPGLTV
Trigger: CACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 90 bp GGTTTCAACTTACACTTCAGTACTCTAGTTGTTAGTACCATACAATaGCCAAGAGGCTTTTTGTTAAAGGCTACTTCTGATATCAGGTTC +
Preference number: 2 (lower is better)
Translates to: GFNLHFSTLVVSTIQ*PRGFLLKATSDIRF
Trigger: GAACCTGATATCAGAAGTAGCCTTTAACAAAAAGCCTCTTGGCAATTGTATGGTACTAACAACTAGAGTACTGAAGTGTAAGTTGAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATTTCATACAGTCATGTaGCATTTCCCCTCCATAACC +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILFHTVM*HFPSIT
Trigger: GGTTATGGAGGGGAAATGTCACATGACTGTATGAAA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACCAACTTGCTCCCCATaGCTACTATTTGTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILPTCSP*LLFVSD
Trigger: ATCAGAAACAAATAGTAGGCATGGGGAGCAAGTTGG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGTTTGACCCACAACTaGAGCATTAATGACACTGTT +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSLTHN*SINDTV
Trigger: AACAGTGTCATTAATGCTGCAGTTGTGGGTCAAACT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAATAGTAAAGGGCACTaGTATTCTGAGGTATCTTCC +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILNSKGH*YSEVSS
Trigger: GGAAGATACCTCAGAATACCAGTGCCCTTTACTATT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATTCAAAAGAAGGGACTaGTTAGAACTAGCATGGCAT +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILFKRRD*LELAWH
Trigger: ATGCCATGCTAGTTCTAACCAGTCCCTTCTTTTGAA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAAACACAGATCTCTCTaGGCTTATAGATGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILKHRSL*AYRCSP
Trigger: AGGAGAACATCTATAAGCCCAGAGAGATCTGTGTTT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAAACACAGATCTCTCTaGGCTTATAGATGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYKHRSL*AYRCSP
Trigger: AGGAGAACATCTATAAGCCCAGAGAGATCTGTGTTT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 90 bp AGTACATTCATTGAGATATATATGGAAAATGTGAGCCATCTCTTCTaGTTTAAAGGGAAATTACAAACCAAAAGTCAATCGCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: STFIEIYMENVSHLF*FKGKLQTKSQSPPK
Trigger: CTTGGGAGGCGATTGACTTTTGGTTTGTAATTTCCCTTTAAACAAGAAGAGATGGCTCACATTTTCCATATATATCTCAATGAATGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTGCAAATGTATTCCATaGGAGAGGGATTTAGAAACA +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYCKCIP*ERDLET
Trigger: TGTTTCTAAATCCCTCTCTCATGGAATACATTTGCA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAACTGATCATAGCCAGTaGATATCACACATTAGAATG +
Preference number: 2 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILTDHSQ*ISHIRM
Trigger: CATTCTAATGTGTGATATTCACTGGCTATGATCAGT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGAGAAAATAATCCTTTaGTGTCTAAGCTATGTGACG +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYEKIIL*CLSYVT
Trigger: CGTCACATAGCTTAGACAGCAAAGGATTATTTTCTC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATATTGCCTCATTAAACTaGAGAGTTCTGTTGACCATT +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYIASLN*RVLLTI
Trigger: AATGGTCAACAGAACTCTCCAGTTTAATGAGGCAAT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCTTAATGATGCAGGTTaGAGTCATTTTAGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYLNDAG*SHFRAN
Trigger: ATTTGCCCTAAAATGACTCCAACCTGCATCATTAAG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTTCAAAAGCAAAAGATaGATCAAGGAGTTGACAGAT +
Preference number: 2 (lower is better)
Translates to: FPQGIPETYSILYSEKNYFKSKR*IKELTD
Trigger: ATCTGTCAACTCCTTGATCCATCTTTTGCTTTTGAA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp CCCAAGACGTGGTCCTCCCAGCAATGCCGCACCCAATaGCACAAGTATGCCTGTCCACCAGAACTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: PKTWSSQQCRTQ*HKYACPPELGA
Trigger: AGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAGGACCACGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp TGCCTTACACGTGCACTGCTGACCGATGATGCCCACTaGCCATCACCAGCACCCCTAGGATGCCAAGGCACG +
Preference number: 3 (lower is better)
Translates to: CLTRALLTDDAH*PSPAPLGCQGT
Trigger: CGTGCCTTGGCATCCTAGGGGTGCTGGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCACGTGTAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp GAGAGGAGATTGCCTTACACGTGCACTGCTGACCGATaGTGCCCACTGACCATCACCAGCACCCCTAGGATG +
Preference number: 3 (lower is better)
Translates to: ERRLPYTCTADR*CPLTITSTPRM
Trigger: CATCCTAGGGGTGCTGGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCACGTGTAAGGCAATCTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp TCTTCGGGCGGGATGGGTACAGATCATATGTGCGTGTaGATTCTTCGGGACTGTGGTGGGCAGACGCAAGAA +
Preference number: 3 (lower is better)
Translates to: SSGGMGTDHMCV*ILRDCGGQTQE
Trigger: TTCTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTACCCATCCCGCCCGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp TATGACTCTTCGGGCGGGATGGGTACAGATCATATGTaGGTGTGCATTCTTCGGGACTGTGGTGGGCAGACG +
Preference number: 3 (lower is better)
Translates to: YDSSGGMGTDHM*VCILRDCGGQT
Trigger: CGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTACCCATCCCGCCCGAAGAGTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp GCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTaGCCATCTCCTCATCTTGCTCCTACAGTCTGTGCA +
Preference number: 3 (lower is better)
Translates to: ACPPELGALTKT*PSPHLAPTVCA
Trigger: TGCACAGACTGTAGGAGCAAGATGAGGAGATGGGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp GCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTaGGGGCTCTTACCAAAACCTGCCCATCTCCTCATC +
Preference number: 3 (lower is better)
Translates to: APNATSMPVHQN*GLLPKPAHLLI
Trigger: GATGAGGAGATGGGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACCCAGATGTGCAAATaGCTAAGCCATTTTTACAGA +
Preference number: 3 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTQMCK*LSHFYR
Trigger: TCTGTAAAAATGGCTTAGCAATTTGCACATCTGGGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGCCCCTTCCAAAAATaGTTTATGAAAGGCCTATAC +
Preference number: 3 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSPFQK*FMKGLY
Trigger: GTATAGGCCTTTCATAAACAATTTTTGGAAGGGGCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTCTTACAATTTAGGATaGTCCATCTACCTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSYNLG*SIYLPL
Trigger: GAGAGGAAGGTAGATGGACAATCCTAAATTGTAAGA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp TTGCTGCTAAAAATCAATCCTATCCAGTCACTGTGCTaGACCACTAAGGAAACCACTGGGGCGGAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: LLLKINPIQSLC*TTKETTGAEWA
Trigger: GGCCCACTCCGCCCCAGTGGTTTCCTTAGTGGTTCAGCACAGTGACTGGATAGGATTGATTTTTAGCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp CAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTaGCATTTAGCTGCACTGGAGCCTTCTGCACTGCGT +
Preference number: 3 (lower is better)
Translates to: QISLFPQVEPMV*HLAALEPSALR
Trigger: ACGCAGTGCAGAAGGCTCCAGTGCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp AAATTACAAACCAAAAGTCAATCGCCTCCCAAGACGTaGTCCTCCCAGCAATGCCGCACCCAATGCCACAAG +
Preference number: 3 (lower is better)
Translates to: KLQTKSQSPPKT*SSQQCRTQCHK
Trigger: CTTGTGGCATTGGGTGCGGCATTGCTGGGAGGACCACGTCTTGGGAGGCGATTGACTTTTGGTTTGTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp GTGAAAGAAGAGGATTCTATGACTCTTCGGGCGGGATaGGTACAGATCATATGTGCGTGTGCATTCTTCGGG +
Preference number: 3 (lower is better)
Translates to: VKEEDSMTLRAG*VQIICACAFFG
Trigger: CCCGAAGAATGCACACGCACATATGATCTGTACCCATCCCGCCCGAAGAGTCATAGAATCCTCTTCTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAGATGGATCAAGGAGTaGACAGATCCCATCTTTTCA +
Preference number: 3 (lower is better)
Translates to: NATSMPVHQNWGLLPKPARWIKE*TDPIFS
Trigger: TGAAAAGATGGGATCTGTCAACTCCTTGATCCATCT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCACCCAGATGTGCAAATaGCTAAGCCATTTTTACAGA +
Preference number: 3 (lower is better)
Translates to: NATSMPVHQNWGLLPKPATQMCK*LSHFYR
Trigger: TCTGTAAAAATGGCTTAGCAATTTGCACATCTGGGT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCATATACTCATCTTTTaGCAATACCAACCCATAGCG +
Preference number: 3 (lower is better)
Translates to: VQIICACAFFGTVVGRRKHILIF*QYQPIA
Trigger: CGCTATGGGTTGGTATTGCAAAAAGATGAGTATATG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAAAGAACTATCACTGTaGAGAGGAACAGATTCAACC +
Preference number: 3 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAKELSL*RGTDST
Trigger: GGTTGAATCTGTTCCTCTCAACAGTGATAGTTCTTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAGCCCCTTCCAAAAATaGTTTATGAAAGGCCTATAC +
Preference number: 3 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASPFQK*FMKGLY
Trigger: GTATAGGCCTTTCATAAACAATTTTTGGAAGGGGCT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCATTTCCCACTGCAACTaGGTTTCAACTTACACTTCA +
Preference number: 3 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAISHCN*VSTYTS
Trigger: TGAAGTGTAAGTTGAAACCAAGTTGCAGTGGGAAAT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGACTGTGATCACAGATaGAGAACAAGCTCTGATAAG +
Preference number: 3 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCDCDHR*RTSSDK
Trigger: CTTATCAGAGCTTGTTCTCAATCTGTGATCACAGTC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp CTGTGGTGTTTAGCAGTTGGTGCTAGGTCAGAATCTTaGCCTGCCACACACCATTTGCTGTCTCTTATACAG +
Preference number: 3 (lower is better)
Translates to: LWCLAVGARSES*PATHHLLSLIQ
Trigger: CTGTATAAGAGACAGCAAATGGTGTGTGGCAGGTCAAGATTCTGACCTAGCACCAACTGCTAAACACCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp CCCTTCCTTGTCAAAGGGCTGATGAGGAAGTCAATGTaGTGCTCTGCGACAACCTTTAAATACACAATGGAG +
Preference number: 3 (lower is better)
Translates to: PFLVKGLMRKSM*CSATTFKYTME
Trigger: CTCCATTGTGTATTTAAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCATCAGCCCTTTGACAAGGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCTGGAGGAGAGGAGATaGCCTTACACGTGCACTGCT +
Preference number: 3 (lower is better)
Translates to: NCTLMMQVGVILGQISLFLEERR*PYTCTA
Trigger: AGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCAG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp ATCCCAGGCAAGCTTTTTAGGACATCCCTACCTCACTaGCGGGAATCCAAGCTTTCTATGTTCTGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: IPGKLFRTSLPH*RESKLSMFCFF
Trigger: GAAGAAACAGAACATAGAAAGCTTGGATTCCCGTCAGTGAGGTAGGGATGTCCTAAAAAGCTTGCCTGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp ATCCACTGGAGCCAACTGTACCTTAATGATGCAGGTTaGAGTCATTTTAGGGCAAATCAGTCTATTCCCCCA +
Preference number: 3 (lower is better)
Translates to: IHWSQLYLNDAG*SHFRANQSIPP
Trigger: TGGGGGAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTTGGCTCCAGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp AGTGTCAGACTTCCCATCATTTCAGCACTAATCCACTaGAGCCAACTGTACCTTAATGATGCAGGTTGGAGT +
Preference number: 3 (lower is better)
Translates to: SVRLPIISALIH*SQLYLNDAGWS
Trigger: ACTCCAACCTGCATCATTAAGGTACAGTTGGCTCCAGTGGATTAGTGCTGAAATGATGGGAAGTCTGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCCTGCCACACACCATTaGCTGTCTCTTATACAGGAA +
Preference number: 3 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIPATHH*LSLIQE
Trigger: TTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAGG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTTTCCAAGGGGAACTTaGGGTGCATACAGAGCTTAC +
Preference number: 3 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVFPRGT*GAYRAY
Trigger: GTAAGCTCTGTATGCACCCAAAGTTCCCCTTGGAAA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp TTCCTTGTCAAAGGGCTGATGAGGAAGTCAATGTGCTaGTCTGCGACAACCTTTAAATACACAATGGAGACT +
Preference number: 3 (lower is better)
Translates to: FLVKGLMRKSMC*SATTFKYTMET
Trigger: AGTCTCCATTGTGTATTTAAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCATCAGCCCTTTGACAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp AAGGCGAAAGAGAAGATGGAAAGCTGTGCTGCCCTATaGAGCTCACTGAGAGTTAGATTTTTCTCTTATACG +
Preference number: 3 (lower is better)
Translates to: KAKEKMESCAAL*SSLRVRFFSYT
Trigger: CGTATAAGAGAAAAATCTAACTCTCAGTGAGCTCCATAGGGCAGCACAGCTTTCCATCTTCTCTTTCGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCCCTATTCAGGAAACTaGAGGAAAAGAAGGACCAAC +
Preference number: 3 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVPYSGN*RKRRTN
Trigger: GTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGGG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp AATGCATGGCCTGTTAAACATACTTGGGTGCCAAGGTaGATGAGAACACTGAAAAAGAAGGGCTTTGAGAAC +
Preference number: 3 (lower is better)
Translates to: NAWPVKHTWVPR*MRTLKKKGFEN
Trigger: GTTCTCAAAGCCCTTCTTTTTCAGTGTTCTCATTCACCTTGGCACCCAAGTATGTTTAACAGGCCATGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp AGAAGATGGAAAGCTGTGCTGCCCTATGGAGCTCACTaGGAGTTAGATTTTTCTCTTATACGAGTATTGATC +
Preference number: 3 (lower is better)
Translates to: RRWKAVLPYGAH*ELDFSLIRVLI
Trigger: GATCAATACTCGTATAAGAGAAAAATCTAACTCTCAGTGAGCTCCATAGGGCAGCACAGCTTTCCATCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp ATAAATGAAATCACCCCAGCTTTGAAATATGCACGGTaGAATGATCCCACCAACTCCTTAAACAAAGCAGCC +
Preference number: 3 (lower is better)
Translates to: INEITPALKYAR*NDPTNSLNKAA
Trigger: GGCTGCTTTGTTTAAGGAGTTGGTGGGATCATTTCACCGTGCATATTTCAAAGCTGGGGTGATTTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp TCCTCATCTTGCTCCTACAGTCTGTGCAGAAACAAGTaGCTCCTAACTTTTGTGCATATAATTAAACTCCCA +
Preference number: 3 (lower is better)
Translates to: SSSCSYSLCRNK*LLTFVHIIKLP
Trigger: TGGGAGTTTAATTATATGCACAAAAGTTAGGAGCCACTTGTTTCTGCACAGACTGTAGGAGCAAGATGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAAAGTCATACCCAATTaGCTTGCTCTCTCTCTGAAA +
Preference number: 3 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVKVIPN*LALSLK
Trigger: TTTCAGAGAGAGAGCAAGCAAATTGGGTATGACTTT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCCTGCCACACACCATTaGCTGTCTCTTATACAGGAA +
Preference number: 3 (lower is better)
Translates to: FPQGIPETYSILYSEKNYPATHH*LSLIQE
Trigger: TTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAGG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAGATGGATCAAGGAGTaGACAGATCCCATCTTTTCA +
Preference number: 3 (lower is better)
Translates to: NCTLMMQVGVILGQISLFRWIKE*TDPIFS
Trigger: TGAAAAGATGGGATCTGTCAACTCCTTGATCCATCT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAACCTCACTTTCCAACTaGCTCCCCATGCCTACTATT +
Preference number: 3 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILTSLSN*LPMPTI
Trigger: AATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGGT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATACCTCACTTTCCAACTaGCTCCCCATGCCTACTATT +
Preference number: 3 (lower is better)
Translates to: FPQGIPETYSILYSEKNYTSLSN*LPMPTI
Trigger: AATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGGT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp ATTAATGAAAGGAGGAGGCAAATTGGTGAATTAAGTTaGTCTAGGAGATGGTGGCTGACATACACTAACGGA +
Preference number: 3 (lower is better)
Translates to: INERRRQIGELS*SRRWWLTYTNG
Trigger: TCCGTTAGTGTATGTCAGCCACCATCTCCTAGATCAACTTAATTCACCAATTTGCCTCCTCCTTTCATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp TTACAATTTAGGATTGTCCATCTACCTTCCTCTCTCTaGAAGTTCTTGAGATGTAATCTGCTGCCAACTCTT +
Preference number: 3 (lower is better)
Translates to: LQFRIVHLPSSL*KFLRCNLLPTL
Trigger: AAGAGTTGGCAGCAGATTACATCTCAAGAACTTGCAGAGAGAGGAAGGTAGATGGACAATCCTAAATTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATTTAGCAGAAAAAGGTaGTGCTACTCACACGACCAG +
Preference number: 3 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILFSRKR*CYSHDQ
Trigger: CTGGTCGTGTGAGTAGCACAACCTTTTTCTGCTAAA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTTTAGCAGAAAAAGGTaGTGCTACTCACACGACCAG +
Preference number: 3 (lower is better)
Translates to: FPQGIPETYSILYSEKNYFSRKR*CYSHDQ
Trigger: CTGGTCGTGTGAGTAGCACAACCTTTTTCTGCTAAA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCATATACTCATCTTTTaGCAATACCAACCCATAGCG +
Preference number: 3 (lower is better)
Translates to: NCTLMMQVGVILGQISLFHILIF*QYQPIA
Trigger: CGCTATGGGTTGGTATTGCAAAAAGATGAGTATATG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAAAGTCATACCCAATTaGCTTGCTCTCTCTCTGAAA +
Preference number: 3 (lower is better)
Translates to: NCTLMMQVGVILGQISLFKVIPN*LALSLK
Trigger: TTTCAGAGAGAGAGCAAGCAAATTGGGTATGACTTT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp TGTAAAAACCTGGCAACAGAATGGAAAGCACTGATCTaGATACTAGGAAATAGTAAAGGGCACTGGTATTCT +
Preference number: 3 (lower is better)
Translates to: CKNLATEWKALI*ILGNSKGHWYS
Trigger: AGAATACCAGTGCCCTTTACTATTTCCTAGTATTCAGATCAGTGCTTTCCATTCTGTTGCCAGGTTTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp ACAATTGCCAAGAGGCTTTTTGTTAAAGGCTACTTCTaGTATCAGGTTCCAGCTAAGCTACTCAGTAAAATG +
Preference number: 3 (lower is better)
Translates to: TIAKRLFVKGYF*YQVPAKLLSKM
Trigger: CATTTTACTGAGTAGCTTAGCTGGAACCTGATATCAGAAGTAGCCTTTAACAAAAAGCCTCTTGGCAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR GCA 72 bp GGCACAATATATAGGGATGCAAGTTTTCTAGAGAGCTaGAGCAAAGTTAATACAGAATGTCACAAACTGAGA +
Preference number: 3 (lower is better)
Translates to: GTIYRDASFLES*SKVNTECHKLR
Trigger: TCTCAGTTTGTGACATTCTGTATTAACTTTGCTGCAGCTCTCTAGAAAACTTGCATCCCTATATATTGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp AACATGATTCTCAACAGTTCTAGGAACAGTTATAAATaGTCTAAAGGTGTTCTACATTTTGAGGCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: NMILNSSRNSYK*SKGVLHFEAPG
Trigger: TCCTGGGGCCTCAAAATGTAGAACACCTTTAGACCATTTATAACTGTTCCTAGAACTGTTGAGAATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp CCCATCTTTTCTTCAGATACTACTGATCATAGCCAGTaGATATCACACATTAGAATGGAATTCAGATTCTCA +
Preference number: 3 (lower is better)
Translates to: PIFSSDTTDHSQ*ISHIRMEFRFS
Trigger: TGAGAATCTGAATTCCATTCTAATGTGTGATATTCACTGGCTATGATCAGTAGTATCTGAAGAAAAGATGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR TCA 72 bp TACTCAATACTATACAGTGAAAAGAACTATCACTGTTaGGAGGAACAGATTCAACCCTTCCAAACAGATGAA +
Preference number: 3 (lower is better)
Translates to: YSILYSEKNYHC*EEQIQPFQTDE
Trigger: TTCATCTGTTTGGAAGGGTTGAATCTGTTCCTCTCAACAGTGATAGTTCTTTTCACTGTATAGTATTGAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CCA 72 bp GGGCATCCAAACGAAAATGTATTTACTCAAAGTTTTTaGTGTGAAGCTGTAACTAGCAACATTCCTGATAAT +
Preference number: 3 (lower is better)
Translates to: GHPNENVFTQSF*CEAVTSNIPDN
Trigger: ATTATCAGGAATGTTGCTAGTTACAGCTTCACACCAAAAACTTTGAGTAAATACATTTTCGTTTGGATGCCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTGCTGGGGGTCACGGTaGCGAAGGCAGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGCWGSR*RRQAVW
Trigger: CCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACCACTGGGGCGGAGTaGGCCTGCCAGGAGGGAATG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTTGAE*ACQEGM
Trigger: CATTCCCTCCTGGCAGGCCCACTCCGCCCCAGTGGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCGCTGGCGGGCATGCTaGGGTTCCCTTGGGGGACTG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPARWRAC*GSLGGL
Trigger: CAGTCCCCCAAGGGAACCTCAGCATGCCCGCCAGCG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGGCCTCCACTGGCAGTaGGACGCTGGCGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAGLHWQ*DAGGHA
Trigger: AGCATGCCCGCCAGCGTCTCACTGCCAGTGGAGGCC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCACTCAGCTCTGGCGTaGATGGGCTCCGGATGTGAG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGHSALA*MGSGCE
Trigger: CTCACATCCGGAGCCCATCCACGCCAGAGCTGAGTG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGGCTGTGTGGTCTCTaGGTTCGAAGTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGRLCGL*VRSGGW
Trigger: CCACCCACCACTTCGAACTCAGAGACCACACAGCCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAAGGCCCCATGCCACTaGAGCTGGTCTGTGGTAACC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGKAPCH*SWSVVT
Trigger: GGTTACCACAGACCAGCTTCAGTGGCATGGGGCCTT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAAGGCTGCGCTGAACTaGGGGAGTTGCTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGKAALN*GSCCLG
Trigger: TCCCAAGCAGCAACTCCCTCAGTTCAGCGCAGCCTT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCTGGTGGCCAAAGGCTaGGCTGAACTGAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGLVAKG*AELREL
Trigger: CAACTCCCTCAGTTCAGCGCAGCCTTTGGCCACCAG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGATCTCTGTCTCTCTCTaGCGCTGCCGATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGISVSL*RCRFWA
Trigger: GGCCCAGAATCGGCAGCGCCAGAGAGAGACAGAGAT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGCACACTGGAGCTGCTaGGGGTCACGGTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAAHWSC*GSRWRR
Trigger: CCTTCGCCACCGTGACCCCCAGCAGCTCCAGTGTGC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCCTCCAGAACGTGTCTaGTACAGAAGGCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGPPERV*YRRRSR
Trigger: ACGGCTACGCCTTCTGTATCAGACACGTTCTGGAGG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGATGGGCTCCGGATGTaGGAGGCCTCCACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPADGLRM*EASTGS
Trigger: ACTGCCAGTGGAGGCCTCTCACATCCGGAGCCCATC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGCAAGTGCTGCGCCATaGTGGGCATCTCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGASAAP*WASLLK
Trigger: TTTCAGCAGAGATGCCCATCATGGCGCAGCACTTGC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGACAGGTGGGAGTGCTaGTGCGGAGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKDRWEC*CGGCCC
Trigger: ACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCAGTGGGAGCCCTACTaGATGGCAGGAGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAQWEPY*MAGGAE
Trigger: CTCTGCCCCTCCTGCCATCCAGTAGGGCTCCCACTG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTGGTCCGGCTTATGCTaGTTCGACTGCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGWSGLC*FDCMQL
Trigger: GAGCTGCATGCAGTCGAACCAGCATAAGCCGGACCA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCAGCTCTGGCGTGGATaGGCTCCGGATGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKQLWRG*APDVRG
Trigger: GCCTCTCACATCCGGAGCCCATCCACGCCAGAGCTG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGGGCGAGGCCTGCTCTaGGTCCTCTGGTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCGRGLL*VLWFLS
Trigger: GGAGAGGAACCAGAGGACTCAGAGCAGGCCTCGCCC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGGCCAAAGGCTGCGCTaGACTGAGGGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAGQRLR*TEGVAA
Trigger: AGCAGCAACTCCCTCAGTTCAGCGCAGCCTTTGGCC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAACTGCCCCTGGATCTaGCCTGCCAGGGGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPANCPWI*PARGVG
Trigger: ACCTACACCCCTGGCAGGGCAGATCCAGGGGCAGTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTCTGGGAGGCATGGCTaGCGTCATGAAGTCCATGAA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSGRHG*RHEVHE
Trigger: TTCATGGACTTCATGACGGCAGCCATGCCTCCCAGA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTACGATCCTCTGATTTaGGGATGGGGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGYDPLI*GWGWCS
Trigger: GCTGCACCAACCCCATCCCCAAATCAGAGGATCGTA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTGGGTGGGTCCACAGTaGGAGCCCTACTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAWVGPQ*EPYWMA
Trigger: TGCCATCCAGTAGGGCTCCCACTGTGGACCCACCCA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCACTCAGCTCTGGCGTaGATGGGCTCCGGATGTGAG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKHSALA*MGSGCE
Trigger: CTCACATCCGGAGCCCATCCACGCCAGAGCTGAGTG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAAGGCCAACGTTGGCTaGGGCAGAGAACTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAKANVG*GRELPL
Trigger: CAGGGGCAGTTCTCTGCCCCAGCCAACGTTGGCCTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAAGGCCAACGTTGGCTaGGGCAGAGAACTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKKANVG*GRELPL
Trigger: CAGGGGCAGTTCTCTGCCCCAGCCAACGTTGGCCTT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTGCTGGGGGTCACGGTaGCGAAGGCAGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCCWGSR*RRQAVW
Trigger: CCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCCTGTCCACCAGAACTaGGGGCTCTTACCAAAACCT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGPVHQN*GLLPKP
Trigger: AGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCATGTCTTTGATATCTaGGGGTTTCCCGGATGGACC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGHVFDI*GFPGWT
Trigger: GGTCCATCCGGGAAACCCTCAGATATCAAAGACATG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGGGAGATTGCCCCAGTaGGTTCTGGGGTTTACCACG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKGRLPQ*VLGFTT
Trigger: CGTGGTAAACCCCAGAACTCACTGGGGCAATCTCCC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAGGGGTCTCCAAGGTTaGCAGGGAGATTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKRGLQG*QGDCPS
Trigger: ACTGGGGCAATCTCCCTGTCAACCTTGGAGACCCCT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTGCACTGCTGACCGATaGTGCCCACTGACCATCACC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPACTADR*CPLTIT
Trigger: GGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTGCTGCGGAGGCTGCTaGTGTGAAGGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCCCGGC*CEGAGG
Trigger: CCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGACAGGTGGGAGTGCTaGTGCGGAGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCDRWEC*CGGCCC
Trigger: ACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGTGGGTGCCACTCCCTaGATTGGTAGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAVGATP*IGRLVF
Trigger: GAACACCAGCCTACCAATGCAGGGAGTGGCACCCAC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGACTGGCACAGAGCACTaGTGTCCATCTGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGTGTEH*CPSANL
Trigger: CAAGTTTGCAGATGGACAGCAGTGCTCTGTGCCAGT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGAAGATGGAAAGCTGTaGTGCCCTATGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGEDGKL*CPMELT
Trigger: AGTGAGCTCCATAGGGCAGCACAGCTTTCCATCTTC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCCTCTGATTTGGGGATaGGGTTGGTGCAGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKPLIWG*GWCSVG
Trigger: GCCAACGCTGCACCAACCCCATCCCCAAATCAGAGG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGATCTCTGTCTCTCTCTaGCGCTGCCGATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKISVSL*RCRFWA
Trigger: GGCCCAGAATCGGCAGCGCCAGAGAGAGACAGAGAT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGATAAAGGTGACAGGTaGGAGTGCTGCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPADKGDR*ECCCGG
Trigger: GCCTCCGCAGCAGCACTCCCACCTGTCACCTTTATC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGGTGGAATGGGTTTTTaGGGTCGACGAGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAGGMGF*GRRGPR
Trigger: GCGTGGACCTCGTCGACCCCAAAAACCCATTCCACC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCAGCTCTGGCGTGGATaGGCTCCGGATGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCQLWRG*APDVRG
Trigger: GCCTCTCACATCCGGAGCCCATCCACGCCAGAGCTG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCATCAGCACTCAGCTCTaGCGTGGATGGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAISTQL*RGWAPD
Trigger: ATCCGGAGCCCATCCACGCCAGAGCTGAGTGCTGAT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTCTTCGGGACTGTGGTaGGCAGACGCAAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKSSGLW*ADARRR
Trigger: TCGCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGATCAGTGTCCAACTaGTGTTTCTGGGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGRSVSN*CFWVHS
Trigger: ACTGTGCACCCAGAAACATCAGTTGGACACTGATCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTGCCACTGTGGACTGTaGTCACAGATTGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGCHCGL*SQIENK
Trigger: CTTGTTCTCAATCTGTGATCACAGTCCACAGTGGCA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGATGGTATCCATCTGGTaGCTGACCTTCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGMVSIW*LTFTSS
Trigger: AGATGAGGTGAAGGTCAGGCACCAGATGGATACCAT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTCTTTACTGGCCGCCTaGAGCAAAGCTTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSLLAA*SKAFLN
Trigger: GTTTAGGAAAGCTTTGCTGCAGGCGGCCAGTAAAGA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGCTGGTTCGACTGCATaGAGCTCTCCGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAAGSTA*SSPQFL
Trigger: CAAGAACTGCGGAGAGCTGCATGCAGTCGAACCAGC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGAAGCACACTGGAGCTaGTGGGGGTCACGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCEAHWS*WGSRWR
Trigger: TCGCCACCGTGACCCCCAGCAGCTCCAGTGTGCTTC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGCAGAAAAAGGTTGTaGTACTCACACGACCAGTCC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSRKRL*YSHDQS
Trigger: GGACTGGTCGTGTGAGTAGCACAACCTTTTTCTGCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGATCATATGTGCGTGTaGATTCTTCGGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGDHMCV*ILRDCG
Trigger: ACCACAGTCCCGAAGAATGCACACGCACATATGATC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGAACCGCTAGTCCTTaGTACCGTGCAGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGRTASP*YRAVSL
Trigger: CAAAGAAACTGCACGGTAGCAAGGACTAGCGGTTCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCAGAGTGAGAGGCGCTaGCAATGGACTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKQSERR*QWTRKL
Trigger: GAGCTTCCTAGTCCATTGCCAGCGCCTCTCACTCTG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGGACTGCAGGTGGAATaGGTTTTTGGGGTCGACGAG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAGLQVE*VFGVDE
Trigger: CTCGTCGACCCCAAAAACCCATTCCACCTGCAGTCC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGCAGGATGTGGCCTCTaGGAGGCATGGCTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCAGCGL*EAWLPS
Trigger: TGACGGCAGCCATGCCTCCCAGAGGCCACATCCTGC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGCCTTGCTCAGCAGCTaGGCAGGATGTGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCALLSS*AGCGLW
Trigger: CCAGAGGCCACATCCTGCCCAGCTGCTGAGCAAGGC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTCTCTGAGTTCGAAGTaGTGGGTGGCGTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASLSSK*WVAWIG
Trigger: CCCTATCCACGCCACCCACCACTTCGAACTCAGAGA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAAGAAGAAAACCGTATaGACAGGGCACCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGKKKTV*TGHLCA
Trigger: TGCACAGAGGTGCCCTGTCCATACGGTTTTCTTCTT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGGCGAAAGAGAAGATaGAAAGCTGTGCTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGRRKRR*KAVLPY
Trigger: ATAGGGCAGCACAGCTTTCCATCTTCTCTTTCGCCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTCGCCTCCCAAGACGTaGTCCTCCCAGCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCSPPKT*SSQQCR
Trigger: GCGGCATTGCTGGGAGGACCACGTCTTGGGAGGCGA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTTCCCTCGGCTGGGCTaGCAGATCAGAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCFPRLG*QIRVRG
Trigger: GCCTCTCACTCTGATCTGTCAGCCCAGCCGAGGGAA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAGAAGGCGTAGCCGTTaGGTCGCCTCTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCRRRSR*VASACT
Trigger: TGTGCAAGCAGAGGCGACTCAACGGCTACGCCTTCT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCGCTGGCGGGCATGCTaGGGTTCCCTTGGGGGACTG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVRWRAC*GSLGGL
Trigger: CAGTCCCCCAAGGGAACCTCAGCATGCCCGCCAGCG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCCGTGGCAGGACATCTaGAAAGTCCTCCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAPWQDI*KVLLVQ
Trigger: TTGAACCAGGAGGACTTTTCAGATGTCCTGCCACGG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCCCTATTCCTCTATCTaGCAACTCCTGGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKPYSSI*QLLDWH
Trigger: GTGCCAGTCCAGGAGTTGTCAGATAGAGGAATAGGG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAAGGCCCCATGCCACTaGAGCTGGTCTGTGGTAACC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCKAPCH*SWSVVT
Trigger: GGTTACCACAGACCAGCTTCAGTGGCATGGGGCCTT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCCTATTCAGGAAACTTaGGGAAAAGAAGGACCAACC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGPIQET*GKEGPT
Trigger: GGTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTGCTTGCTCTCTCTCTaGAACGTCACATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGCLLSL*NVTFPL
Trigger: AAGAGGAAATGTGACGTTTCAGAGAGAGAGCAAGCA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCAACTGCCACTGCAGTaGCAATATTCCAGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAQLPLQ*QYSSRG
Trigger: GCCCCTACTGGAATATTGTCACTGCAGTGGCAGTTG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTGGGGATGGGGTTGGTaGAGCGTTGGCTGTTATACT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKWGWGW*SVGCYT
Trigger: AGTATAACAGCCAACGCTGCACCAACCCCATCCCCA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGTCTCTCTCTGGCGCTaGCGATTCTGGGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCVSLWR*RFWANL
Trigger: CAAGTTGGCCCAGAATCGGCAGCGCCAGAGAGAGAC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTCTGGGAGGCATGGCTaGCGTCATGAAGTCCATGAA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKSGRHG*RHEVHE
Trigger: TTCATGGACTTCATGACGGCAGCCATGCCTCCCAGA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTAGGTCATCTGCCTTaGTCAGCAGCTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKLGHLP*SAAGQD
Trigger: ATCCTGCCCAGCTGCTGAGCAAGGCAGATGACCTAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGGGACAGCTGCTTCCTaGACTGCACAAAAACACACG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKGTAAS*TAQKHT
Trigger: CGTGTGTTTTTGTGCAGTGCAGGAAGCAGCTGTCCC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCCTCTGATTTGGGGATaGGGTTGGTGCAGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCPLIWG*GWCSVG
Trigger: GCCAACGCTGCACCAACCCCATCCCCAAATCAGAGG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTACGATCCTCTGATTTaGGGATGGGGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAYDPLI*GWGWCS
Trigger: GCTGCACCAACCCCATCCCCAAATCAGAGGATCGTA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTTCCATCCAGTCCGTTaGGCATCTTCAAGGCCAACG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAFHPVR*ASSRPT
Trigger: CGTTGGCCTTGAAGATGCCCAACGGACTGGATGGAA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTGGCGCTGCCGATTCTaGGCCAACTTGCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCWRCRF*ANLLCN
Trigger: GTTGCAGAGCAAGTTGGCCCAGAATCGGCAGCGCCA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCCACCTCCCTCAGCTTaGTCCGGCTTATGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCPPPSA*SGLCWF
Trigger: GAACCAGCATAAGCCGGACCAAGCTGAGGGAGGTGG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCACTCTTCGGGCGGGATaGGTACAGATCATATGTGCG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPATLRAG*VQIICA
Trigger: CGCACATATGATCTGTACCCATCCCGCCCGAAGAGT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGGCGAGGCCTGCTCTaGGTCCTCTGGTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGRGLL*VLWFLS
Trigger: GGAGAGGAACCAGAGGACTCAGAGCAGGCCTCGCCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCATGTCTTTGATATCTaGGGGTTTCCCGGATGGACC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAHVFDI*GFPGWT
Trigger: GGTCCATCCGGGAAACCCTCAGATATCAAAGACATG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGACTGGCACACCATCTaGCTGGGCAAGGACCCCAAT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCDWHTI*LGKDPN
Trigger: ATTGGGGTCCTTGCCCAGTCAGATGGTGTGCCAGTC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGGGTGTAGGTGGGTTTaGCAAGGTAGCAGAACGGAG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCGCRWV*QGSRTE
Trigger: CTCCGTTCTGCTACCTTGTCAAACCCACCTACACCC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGCTAGGTCAGAATCTTaGCCTGCCACACACCATTTG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAARSES*PATHHL
Trigger: CAAATGGTGTGTGGCAGGTCAAGATTCTGACCTAGC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGACATCCCTACCTCACTaGCGGGAATCCAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKTSLPH*RESKLS
Trigger: AGAAAGCTTGGATTCCCGTCAGTGAGGTAGGGATGT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTATCTCAAGGGACAGTaGAACTACTCAGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGYLKGQ*NYSAKA
Trigger: TGCTTTTGCTGAGTAGTTTCACTGTCCCTTGAGATA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTGCACTGCTGACCGATaGTGCCCACTGACCATCACC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCCTADR*CPLTIT
Trigger: GGTGATGGTCAGTGGGCATCATCGGTCAGCAGTGCA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGATAGCTATACACCTTaGCACGGCAGAGATCCAGTG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKDSYTP*HGRDPV
Trigger: CACTGGATCTCTGCCGTGTCAAGGTGTATAGCTATC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTTTTATGCTCGAAAGTaGGAGGCTGATCTTAGAACC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGFYARK*EADLRT
Trigger: GGTTCTAAGATCAGCCTCTCACTTTCGAGCATAAAA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCCATTAACCAGCAACTaGAGGGAGAAATGGCACCAG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAPLTSN*REKWHQ
Trigger: CTGGTGCCATTTCTCCCTTCAGTTGCTGGTTAATGG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGAGGGGGACTAAAGTaGTCTTGTCGAACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGGGGLK*SCRTFK
Trigger: TTTAAAAGTTCGACAAGAGCACTTTAGTCCCCCTCC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGACTGGCACAGAGCACTaGTGTCCATCTGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKTGTEH*CPSANL
Trigger: CAAGTTTGCAGATGGACAGCAGTGCTCTGTGCCAGT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGGCTCTCTCCCCAAGTaGACTCTGGCTGATCAGAGT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCGSLPK*TLADQS
Trigger: ACTCTGATCAGCCAGAGTGCACTTGGGGAGAGAGCC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCAGGCACGTGGTATCTaGATAATGCCTGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKQARGI*IMPADH
Trigger: GTGATCAGCAGGCATTATGCAGATACCACGTGCCTG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGAGACTAAACTGAACTaGTGGGAATGGACAGTTATC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGETKLN*WEWTVI
Trigger: GATAACTGTCCATTCCCAGCAGTTCAGTTTAGTCTC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGGAAGTCAATGTGCTaGTCTGCGACAACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGRKSMC*SATTFK
Trigger: TTTAAAGGTTGTCGCAGAGCAGCACATTGACTTCCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTGGAGCCTTCTGCACTaGGTGTTGAAAATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGWSLLH*VLKIFP
Trigger: TGGAAAAATTTTCAACACGCAGTGCAGAAGGCTCCA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGACCCTTGCCCCAGGTaGAGAGAGGGACATTCCATC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCDPCPR*REGHSI
Trigger: GATGGAATGTCCCTCTCTCCACCTGGGGCAAGGGTC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTGGCGCTGCCGATTCTaGGCCAACTTGCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCWRCRF*ANLLCN
Trigger: GTTGCAGAGCAAGTTGGCCCAGAATCGGCAGCGCCA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAAAGTTGAGTCACCCTaGAGCTCCTACTCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKKVESP*SSYSPH
Trigger: ATGCGGAGAGTAGGAGCTCCAGGGTGACTCAACTTT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCATCAGCACTCAGCTCTaGCGTGGATGGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCISTQL*RGWAPD
Trigger: ATCCGGAGCCCATCCACGCCAGAGCTGAGTGCTGAT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCTATCTGACAACTCCTaGACTGGCACACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKLSDNS*TGTPSD
Trigger: GTCAGATGGTGTGCCAGTCCAGGAGTTGTCAGATAG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAAGCTCCAGTACCTGTaGAGAACACCCCTATTCCTC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAKLQYL*RTPLFL
Trigger: GAGGAATAGGGGTGTTCTCCACAGGTACTGGAGCTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTGCCCCAGTGAGTTCTaGGGTTTACCACGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCCPSEF*GLPRLQ
Trigger: TTGGAGGCGTGGTAAACCCCAGAACTCACTGGGGCA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCACCCCGGAAGCACACTaGAGCTGCTGGGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPITPEAH*SCWGSR
Trigger: CCGTGACCCCCAGCAGCTCCAGTGTGCTTCCGGGGT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAGCTGTGCTGCCCTATaGAGCTCACTGAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASCAAL*SSLRVR
Trigger: TCTAACTCTCAGTGAGCTCCATAGGGCAGCACAGCT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTGCCGGCATTTCTTTTaGCGAGATTCTGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCCRHFF*RDSARS
Trigger: GGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCTTGGCTGTGCAACTTaGGAAGAGCTGCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCLGCAT*EELLRV
Trigger: CACTCTCAGCAGCTCTTCTCAAGTTGCACAGCCAAG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGATGGGCTCCGGATGTaGGAGGCCTCCACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIDGLRM*EASTGS
Trigger: ACTGCCAGTGGAGGCCTCTCACATCCGGAGCCCATC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGGGTGTAGGTGGGTTTaGCAAGGTAGCAGAACGGAG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCGCRWV*QGSRTE
Trigger: CTCCGTTCTGCTACCTTGTCAAACCCACCTACACCC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTGCCACTGTGGACTGTaGTCACAGATTGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPACHCGL*SQIENK
Trigger: CTTGTTCTCAATCTGTGATCACAGTCCACAGTGGCA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTACTAGGAAGCTCGGCTaGCGCTGCTACTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRITRKLG*RCYCSP
Trigger: GGGGGAGCAGTAGCAGCGGCAGCCGAGCTTCCTAGT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGTATTAACTGACCAGTaGATTCTGGTTCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGVLTDQ*ILVLYW
Trigger: CCAGTAAAGAACCAGAATGCACTGGTCAGTTAATAC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCCCCTGGATCTGCCCTaGCAGGGGTGTAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIPLDLP*QGCRWV
Trigger: AACCCACCTACACCCCTGGCAGGGCAGATCCAGGGG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGGCTCTCTCCCCAAGTaGACTCTGGCTGATCAGAGT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCGSLPK*TLADQS
Trigger: ACTCTGATCAGCCAGAGTGCACTTGGGGAGAGAGCC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGATCATATGTGCGTGTaGATTCTTCGGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKDHMCV*ILRDCG
Trigger: ACCACAGTCCCGAAGAATGCACACGCACATATGATC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAGAACCGCTAGTCCTTaGTACCGTGCAGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPARTASP*YRAVSL
Trigger: CAAAGAAACTGCACGGTAGCAAGGACTAGCGGTTCT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCTCATTGAAAGCAAATaGGTCTTCCAATTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGLIESK*VFQFGF
Trigger: GAAACCGAATTGGAAGACCCATTTGCTTTCAATGAG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGGATCCGGTCAGTCCTaGGTGGGTCCACAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVGSGQS*VGPQWE
Trigger: CTCCCACTGTGGACCCACCCAGGACTGACCGGATCC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTCTGAAAAGTCCTCCTaGTTCAATTCCAAGTCATGT +
Preference number: 4 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGSEKSS*FNSKSC
Trigger: ACATGACTTGGAATTGAACCAGGAGGACTTTTCAGA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGGCACACCATCTGACTaGGCAAGGACCCCAATGGTA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCGTPSD*ARTPMV
Trigger: TACCATTGGGGTCCTTGCCCAGTCAGATGGTGTGCC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGCAGAGAACTGCCCCTaGATCTGCCCTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVAENCP*ICPARG
Trigger: ACCCCTGGCAGGGCAGATCCAGGGGCAGTTCTCTGC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGCAGAGAACTGCCCCTaGATCTGCCCTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIAENCP*ICPARG
Trigger: ACCCCTGGCAGGGCAGATCCAGGGGCAGTTCTCTGC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTCCCCAAGTGCACTCTaGCTGATCAGAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSPSAL*LIRVAE
Trigger: TTCTGCCACTCTGATCAGCCAGAGTGCACTTGGGGA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGCCTTGCTCAGCAGCTaGGCAGGATGTGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIALLSS*AGCGLW
Trigger: CCAGAGGCCACATCCTGCCCAGCTGCTGAGCAAGGC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGAGTACGATGTTGTGTaGGGAGAGGTGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKEYDVV*GEVIWS
Trigger: TGACCATATCACCTCTCCCCACACAACATCGTACTC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGAGAAGGTTGCTAAATaGAGAGGGGTCTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAEKVAK*RGVSKV
Trigger: AACCTTGGAGACCCCTCTCCATTTAGCAACCTTCTC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTCTCTGAGTTCGAAGTaGTGGGTGGCGTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCSLSSK*WVAWIG
Trigger: CCCTATCCACGCCACCCACCACTTCGAACTCAGAGA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGCTGCTTGGGAGAGGTaGAGGCCATTAGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCAAWER*RPLVQQ
Trigger: CTGCTGAACTAATGGCCTCCACCTCTCCCAAGCAGC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAAAGATAGAAAACACTaGGTTCCCCACCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKKDRKH*VPHLPA
Trigger: TGCAGGCAGGTGGGGAACCCAGTGTTTTCTATCTTT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCATTCTTCGGGACTGTaGTGGGCAGACGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCHSSGL*WADARR
Trigger: CCTTCTTGCGTCTGCCCACCACAGTCCCGAAGAATG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTCGCCTCCCAAGACGTaGTCCTCCCAGCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISPPKT*SSQQCR
Trigger: GCGGCATTGCTGGGAGGACCACGTCTTGGGAGGCGA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTAAGGGGAAATCCCTaGATATACTCTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKLRGNP*IYSPAK
Trigger: CTTGGCTGGAGAGTATATTCAGGGATTTCCCCTTAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTGCTCCCAGGGTCGGTaGTTATTAAGGGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCCSQGR*LLRGNP
Trigger: GGGATTTCCCCTTAATAATCACCGACCCTGGGAGCA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTTCCCTCGGCTGGGCTaGCAGATCAGAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVFPRLG*QIRVRG
Trigger: GCCTCTCACTCTGATCTGTCAGCCCAGCCGAGGGAA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTCTGACGCATGTCTTTaGTATCTGAGGGTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSDACL*YLRVSR
Trigger: CCGGGAAACCCTCAGATATCAAAGACATGCGTCAGA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGGTGAGGAGTGTGAGTaGTCACTGCTGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCGEECE*SLLYCC
Trigger: ACAGCAATACAGCAGTGATCACTCACACTCCTCACC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCCTATTCAGGAAACTTaGGGAAAAGAAGGACCAACC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAPIQET*GKEGPT
Trigger: GGTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCATTCTGAAGCTGAGATaGGAGCCTGGAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCILKLR*EPGGER
Trigger: CCTTTCTCCTCCAGGCTCTCATCTCAGCTTCAGAAT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCAACTGCCACTGCAGTaGCAATATTCCAGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCQLPLQ*QYSSRG
Trigger: GCCCCTACTGGAATATTGTCACTGCAGTGGCAGTTG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCTAGGAGATGGTGGCTaGCATACACTAACGGAAATA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKLGDGG*HTLTEI
Trigger: TATTTCCGTTAGTGTATGTCAGCCACCATCTCCTAG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCCTGCAAGTGGCTGTTaGAGTACCTACGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCPASGC*STYDPL
Trigger: CAGAGGATCGTAGGTACTGCAACAGCCACTTGCAGG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGATTCTGGGCCAACTTaGTCTGCAACTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPADSGPT*SATSFS
Trigger: TGAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAGAACCCCGGCAGCCTaGAGTCATCCCAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIRTPAA*SHPRQA
Trigger: AGCTTGCCTGGGATGACTGCAGGCTGCCGGGGTTCT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCCCATCTCCTCATCTTaGTCCTACAGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCPISSS*SYSLCR
Trigger: TCTGCACAGACTGTAGGAGCAAGATGAGGAGATGGG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCCTGCATTGGTAGGCTaGTGTTCTGAGGTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCPALVG*CSEVEV
Trigger: CACCTCAACCTCAGAACACCAGCCTACCAATGCAGG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTGGGTGGGTCCACAGTaGGAGCCCTACTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVWVGPQ*EPYWMA
Trigger: TGCCATCCAGTAGGGCTCCCACTGTGGACCCACCCA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCAGTCCAAACCTAAATaGGGAAACAGATCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAQSKPK*GNRSVS
Trigger: GGACACTGATCTGTTTCCCCATTTAGGTTTGGACTG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGTCCATCTGCAAACTTaGCTGTGCAACTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAVHLQT*LCNLRR
Trigger: TCTTCTCAAGTTGCACAGCCAAGTTTGCAGATGGAC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCTATCTGACAACTCCTaGACTGGCACACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCLSDNS*TGTPSD
Trigger: GTCAGATGGTGTGCCAGTCCAGGAGTTGTCAGATAG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAAGCTCCAGTACCTGTaGAGAACACCCCTATTCCTC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCKLQYL*RTPLFL
Trigger: GAGGAATAGGGGTGTTCTCCACAGGTACTGGAGCTT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCAACACAGCTCATGTCTaGGGCTGTCTGTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCNTAHV*GCLSPS
Trigger: AGAGGGAGACAGACAGCCCCAGACATGAGCTGTGTT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGCTGACAGATCAGAGTaGGAGGCGCTGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIADRSE*EALAMD
Trigger: GTCCATTGCCAGCGCCTCTCACTCTGATCTGTCAGC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCAGTTTGGGGCTATATaGGCACAAGGGCTTATTGTC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCQFGAI*AQGLIV
Trigger: GACAATAAGCCCTTGTGCTCATATAGCCCCAAACTG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAGAAGGCGTAGCCGTTaGGTCGCCTCTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVRRRSR*VASACT
Trigger: TGTGCAAGCAGAGGCGACTCAACGGCTACGCCTTCT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGGCAGAGGCCTCTTGTaGGACAACTGCCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVGRGLL*DNCRAC
Trigger: ACAAGCACGGCAGTTGTCTCACAAGAGGCCTCTGCC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAGGCTGTGGCTTTCATaGGGATCCGGTCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVRLWLS*GSGQSW
Trigger: CCAGGACTGACCGGATCCTCATGAAAGCCACAGCCT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGGCCTCCACTGGCAGTaGGACGCTGGCGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILGLHWQ*DAGGHA
Trigger: AGCATGCCCGCCAGCGTCTCACTGCCAGTGGAGGCC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGACTGGCACACCATCTaGCTGGGCAAGGACCCCAAT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIDWHTI*LGKDPN
Trigger: ATTGGGGTCCTTGCCCAGTCAGATGGTGTGCCAGTC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCATTGCTGTCGTGAGGTaGTTAGGTCATCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCIAVVR*LGHLPC
Trigger: GCAAGGCAGATGACCTAATCACCTCACGACAGCAAT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGGAGATTGCCCCAGTaGGTTCTGGGGTTTACCACG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGRLPQ*VLGFTT
Trigger: CGTGGTAAACCCCAGAACTCACTGGGGCAATCTCCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTTCATACAGTCATGTaGCATTTCCCCTCCATAACC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKFHTVM*HFPSIT
Trigger: GGTTATGGAGGGGAAATGTCACATGACTGTATGAAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCACTGTGATCACAGATTaGGAACAAGCTCTGATAAGG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPATVITD*EQALIR
Trigger: CCTTATCAGAGCTTGTTCTCAATCTGTGATCACAGT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCACCGATGATGCCCACTaGCCATCACCAGCACCCCTA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPITDDAH*PSPAPL
Trigger: TAGGGGTGCTGGTGATGGTCAGTGGGCATCATCGGT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTTCTGCACTGCGTGTTaGAAATTTTTCCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAFCTAC*KFFQGE
Trigger: TTCCCCTTGGAAAAATTTTCAACACGCAGTGCAGAA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAAATCACCCCAGCTTTaGAATATGCACGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKKSPQL*NMHGEM
Trigger: CATTTCACCGTGCATATTTCAAAGCTGGGGTGATTT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGATTGGTGAATTAAGTTaGTCTAGGAGATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKIGELS*SRRWWL
Trigger: CAGCCACCATCTCCTAGATCAACTTAATTCACCAAT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCTTTTGACGAGATTCTaGCCGCTCCAGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRILLTRF*PLQAAE
Trigger: CTCTGCCGCCTGGAGCGGGCAGAATCTCGTCAAAAG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTCTTTACTGGCCGCCTaGAGCAAAGCTTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSLLAA*SKAFLN
Trigger: GTTTAGGAAAGCTTTGCTGCAGGCGGCCAGTAAAGA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTTATGCTGGTTCGACTaGATGCAGCTCTCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCLCWFD*MQLSAV
Trigger: AACTGCGGAGAGCTGCATGCAGTCGAACCAGCATAA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCACGGTTCCACTGCATaGTGCTGGTTCCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIHGSTA*CWFHLP
Trigger: AGGGAGGTGGAACCAGCAGCATGCAGTGGAACCGTG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAGTGTGAGTGATCACTaGTGTATTGCTGTCGTGAGG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSVSDH*CIAVVR
Trigger: CCTCACGACAGCAATACAGCAGTGATCACTCACACT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTGGGTTGGGAGCAAGTaGTGCGCCATGATGGGCATC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIWVGSK*CAMMGI
Trigger: GATGCCCATCATGGCGCAGCACTTGCTCCCAACCCA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCTGGTGGCCAAAGGCTaGGCTGAACTGAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRILVAKG*AELREL
Trigger: CAACTCCCTCAGTTCAGCGCAGCCTTTGGCCACCAG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGAGCTGTGGCTGGGCTaGAGGTCCTTAGGAATGCCA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVELWLG*RSLGMP
Trigger: TGGCATTCCTAAGGACCTGCAGCCCAGCCACAGCTC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGGGAAAGGGAGAAGATaGATTATTGGTACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKGKGRR*IIGTCS
Trigger: GCTACAAGTACCAATAATGCATCTTCTCCCTTTCCC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCCAACTTGCTCCCCATaGCTACTATTTGTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAPTCSP*LLFVSD
Trigger: ATCAGAAACAAATAGTAGGCATGGGGAGCAAGTTGG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAAGGAAAAAGTCCTATaGAAGACACTGTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKKEKVL*KTLWAT
Trigger: TGTAGCCCACAGTGTCTTGCATAGGACTTTTTCCTT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGGGCAAGGACCCCAATaGTACTCAGGCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIGQGPQ*YSGTRE
Trigger: CTCTCGAGTGCCTGAGTACCATTGGGGTCCTTGCCC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGCAGGATGTGGCCTCTaGGAGGCATGGCTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFAGCGL*EAWLPS
Trigger: TGACGGCAGCCATGCCTCCCAGAGGCCACATCCTGC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCAAGTGGTGGGTGGCGTaGATAGGGAAGTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCKWWVA*IGKWKE
Trigger: TTCTTTCCACTTCCCTATCCACGCCACCCACCACTT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGGGGCTATAGAGCTGTaGCTGGGCTGCAGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIGAIEL*LGCRSL
Trigger: TAAGGACCTGCAGCCCAGCCACAGCTCTATAGCCCC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAAAGATAGAAAACACTaGGTTCCCCACCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCKDRKH*VPHLPA
Trigger: TGCAGGCAGGTGGGGAACCCAGTGTTTTCTATCTTT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCTGTGCAGAAACAAGTaGCTCCTAACTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPALCRNK*LLTFVH
Trigger: ATGCACAAAAGTTAGGAGCCACTTGTTTCTGCACAG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCTGTGCAGAAACAAGTaGCTCCTAACTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKLCRNK*LLTFVH
Trigger: ATGCACAAAAGTTAGGAGCCACTTGTTTCTGCACAG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 72 bp ACACGACCAGTCCACCACCCTCCCTATTCAGGAAACTaGAGGAAAAGAAGGACCAACCTTATTAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: TRPVHHPPYSGN*RKRRTNLIRTV
Trigger: CACAGTCCTAATAAGGTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGGGAGGGTGGTGGACTGGTCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCCTCCAGAACGTGTCTaGTACAGAAGGCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIPPERV*YRRRSR
Trigger: ACGGCTACGCCTTCTGTATCAGACACGTTCTGGAGG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTGCCGGCATTTCTTTTaGCGAGATTCTGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVCRHFF*RDSARS
Trigger: GGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTCACACAGAGGTGTCTaGTGTGTAATGTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASHRGV*CVMSKT
Trigger: AGTTTTTGACATTACACATCAGACACCTCTGTGTGA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGACTGCAGAAACAGAGTaGAACTTCTTTGCCACTATT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKTAETE*NFFATI
Trigger: AATAGTGGCAAAGAAGTTTCACTCTGTTTCTGCAGT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCACTGCCTGCCAACATaGAATTGCTCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCHCLPT*NCSGSH
Trigger: ATGACTTCCTGAGCAATTTCATGTTGGCAGGCAGTG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTTACACGTGCACTGCTaGCCGATGATGCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRILHVHC*PMMPTD
Trigger: GTCAGTGGGCATCATCGGTCAGCAGTGCACGTGTAA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTTGAAATATGCACGGTaGAATGATCCCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCLKYAR*NDPTNS
Trigger: GGAGTTGGTGGGATCATTTCACCGTGCATATTTCAA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTACCAACTCTACTTTTaGCTATTTCAGACCACCAGA +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAYQLYF*LFQTTR
Trigger: TCTGGTGGTCTGAAATAGTCAAAAGTAGAGTTGGTA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTACCAACTCTACTTTTaGCTATTTCAGACCACCAGA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKYQLYF*LFQTTR
Trigger: TCTGGTGGTCTGAAATAGTCAAAAGTAGAGTTGGTA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTACCACAGTTTGGAATaGCGCAGAATCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCYHSLE*RRIRMK
Trigger: CTTCATCCTGATTCTGCGGCATTCCAAACTGTGGTA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCCGTTGAGTCGCCTCTaGTTGCACAGTTTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVPLSRL*LHSLGL
Trigger: TAGCCCCAAACTGTGCAAGCAGAGGCGACTCAACGG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTTGCAGACTGAACCCTaGGGTGGCGCTGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRILQTEP*GGAGGF
Trigger: AAAACCTCCAGCGCCACCGCAGGGTTCAGTCTGCAA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTTCCCGGATGGACCATaGAACCTGGTAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFFPDGP*NLVGRG
Trigger: GCCTCGCCCTACCAGGTTGCATGGTCCATCCGGGAA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGTATTAACTGACCAGTaGATTCTGGTTCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAVLTDQ*ILVLYW
Trigger: CCAGTAAAGAACCAGAATGCACTGGTCAGTTAATAC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCCTTCACGGTTCCACTaGATGCTGCTGGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIPSRFH*MLLVPP
Trigger: AGGTGGAACCAGCAGCATGCAGTGGAACCGTGAAGG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCTGCAAACTTGGCTGTaGAACTTGAGAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCLQTWL*NLRRAA
Trigger: AGCAGCTCTTCTCAAGTTGCACAGCCAAGTTTGCAG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAAGAAGATGTCCATCTaGGCCGAGAAGGTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCKKMSI*AEKVAK
Trigger: TTTAGCAACCTTCTCGGCGCAGATGGACATCTTCTT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGTCAGAATCTTGACCTaGCACACACCATTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCVRILT*HTPFAV
Trigger: GACAGCAAATGGTGTGTGGCAGGTCAAGATTCTGAC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCACAATGTCTGGTGAATaGAAGGGCTTTGTTAGCGCA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCTMSGE*KGFVSA
Trigger: TGCGCTAACAAAGCCCTTCCATTCACCAGACATTGT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGACTGCAGGTGGAATaGGTTTTTGGGGTCGACGAG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGLQVE*VFGVDE
Trigger: CTCGTCGACCCCAAAAACCCATTCCACCTGCAGTCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGCACACCATCTGACTaGGCAAGGACCCCAATGGTA +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGTPSD*ARTPMV
Trigger: TACCATTGGGGTCCTTGCCCAGTCAGATGGTGTGCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTACCACGCCTCCAAGTaGCACCTCAAGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVYHASK*HLKLGW
Trigger: CCAACCCAACTTGAGGTGCCACTTGGAGGCGTGGTA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTGCCCCAGTGAGTTCTaGGGTTTACCACGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVCPSEF*GLPRLQ
Trigger: TTGGAGGCGTGGTAAACCCCAGAACTCACTGGGGCA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGCGTGGATAGGGAAGTaGAAAGAAGATGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCAWIGK*KEDVHL
Trigger: CAGATGGACATCTTCTTTCCACTTCCCTATCCACGC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCTGAGTTCGAAGTGGTaGGTGGCGTGGATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVLSSKW*VAWIGK
Trigger: CTTCCCTATCCACGCCACCCACCACTTCGAACTCAG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCGAAGGCAGGCTGTGTaGTCTCTGAGTTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIRRQAV*SLSSKW
Trigger: CCACTTCGAACTCAGAGACCACACAGCCTGCCTTCG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGCACACTGGAGCTGCTaGGGGTCACGGTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILAHWSC*GSRWRR
Trigger: CCTTCGCCACCGTGACCCCCAGCAGCTCCAGTGTGC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATACCCCGGAAGCACACTaGAGCTGCTGGGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYTPEAH*SCWGSR
Trigger: CCGTGACCCCCAGCAGCTCCAGTGTGCTTCCGGGGT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGCTGCTTGGGAGAGGTaGAGGCCATTAGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIAAWER*RPLVQQ
Trigger: CTGCTGAACTAATGGCCTCCACCTCTCCCAAGCAGC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAATAGTAAAGGGCACTaGTATTCTGAGGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPANSKGH*YSEVSS
Trigger: GGAAGATACCTCAGAATACCAGTGCCCTTTACTATT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCACCTATGTAAAAACCTaGCAACAGAATGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPATYVKT*QQNGKH
Trigger: GTGCTTTCCATTCTGTTGCCAGGTTTTTACATAGGT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAAACACAGATCTCTCTaGGCTTATAGATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAKHRSL*AYRCSP
Trigger: AGGAGAACATCTATAAGCCCAGAGAGATCTGTGTTT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCCTTCTGAACTAACCTaGAGGAGAGGAGATTGCCTT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCPSELT*RRGDCL
Trigger: AAGGCAATCTCCTCTCCTCCAGGTTAGTTCAGAAGG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCATTCTTCGGGACTGTaGTGGGCAGACGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIHSSGL*WADARR
Trigger: CCTTCTTGCGTCTGCCCACCACAGTCCCGAAGAATG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTTCCCACTGCAACTTaGTTTCAACTTACACTTCAG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKFPTAT*FQLTLQ
Trigger: CTGAAGTGTAAGTTGAAACCAAGTTGCAGTGGGAAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGGCAGAGGCCTCTTGTaGGACAACTGCCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFGRGLL*DNCRAC
Trigger: ACAAGCACGGCAGTTGTCTCACAAGAGGCCTCTGCC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCGCATCATCATCATCTaGCGCATGTCTTTGATATCT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCRIIII*RMSLIS
Trigger: AGATATCAAAGACATGCGTCAGATGATGATGATGCG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCCGTGGCAGGACATCTaGAAAGTCCTCCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIPWQDI*KVLLVQ
Trigger: TTGAACCAGGAGGACTTTTCAGATGTCCTGCCACGG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAGGCTGTGTGGTCTCTaGGTTCGAAGTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFRLCGL*VRSGGW
Trigger: CCACCCACCACTTCGAACTCAGAGACCACACAGCCT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTTAGGAATGCCACTGTaGGAACTCAGCTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPILGMPL*ELSWWP
Trigger: TGGCCACCAGCTGAGTTCTCACAGTGGCATTCCTAA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTTAGGAATGCCACTGTaGGAACTCAGCTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVLGMPL*ELSWWP
Trigger: TGGCCACCAGCTGAGTTCTCACAGTGGCATTCCTAA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTGCAAATGTATTCCATaGGAGAGGGATTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKCKCIP*ERDLET
Trigger: TGTTTCTAAATCCCTCTCTCATGGAATACATTTGCA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCTTTTCAAATCTATCTaGCCTATCCTGCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPALFKSI*PILLFH
Trigger: GTGAAAAAGCAGGATAGGTCAGATAGATTTGAAAAG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTTTCATACAGTCATGTaGCATTTCCCCTCCATAACC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCFHTVM*HFPSIT
Trigger: GGTTATGGAGGGGAAATGTCACATGACTGTATGAAA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCGAGGTAACTACTCGTaGCCACTTCATTACAGTACA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCRGNYS*PLHYST
Trigger: TGTACTGTAATGAAGTGGTCACGAGTAGTTACCTCG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCACCGATGATGCCCACTaGCCATCACCAGCACCCCTA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFTDDAH*PSPAPL
Trigger: TAGGGGTGCTGGTGATGGTCAGTGGGCATCATCGGT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGCAAAAGAGATACAAATaGGGACTGTTCAGTATGATG +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKQKRYK*GLFSMM
Trigger: CATCATACTGAACAGTCCTCATTTGTATCTCTTTTG...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAAGAAGAGGATTCTATaGCTCTTCGGGCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIKKRIL*LFGRDG
Trigger: CCCATCCCGCCCGAAGAGTCATAGAATCCTCTTCTT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCAAGAGGCTAACATGTaGCCTTGTATGCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCQEANM*PCMLSI
Trigger: AATGGAAAGCATACAAGGTCACATGTTAGCCTCTTG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCACAAAGCTCCTCAAGTaGATCTCCAGCTCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCTKLLK*ISSSFL
Trigger: TAAGAAAGAGCTGGAGATTCACTTGAGGAGCTTTGT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATACTAGGAAGCTCGGCTaGCGCTGCTACTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYTRKLG*RCYCSP
Trigger: GGGGGAGCAGTAGCAGCGGCAGCCGAGCTTCCTAGT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTGGGGATGGGGTTGGTaGAGCGTTGGCTGTTATACT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIWGWGW*SVGCYT
Trigger: AGTATAACAGCCAACGCTGCACCAACCCCATCCCCA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGATTCTGGGCCAACTTaGTCTGCAACTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCDSGPT*SATSFS
Trigger: TGAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATGCTGCGGAGGCTGCTaGTGTGAAGGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILCCGGC*CEGAGG
Trigger: CCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCAACTGCCGTGCTTGTaGTATAGTGTGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIQLPCL*YSVCGG
Trigger: CCCACCACACACACTATAGCACAAGCACGGCAGTTG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTCTGCTGAAAGTAAGTaGAAAGTTGAGTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCSAESK*KVESPW
Trigger: CCAGGGTGACTCAACTTTGCACTTACTTTCAGCAGA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGTTCCCTTGGGGGACTaGAGGTGGAATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIVPLGD*RWNGFL
Trigger: CAAAAACCCATTCCACCTGCAGTCCCCCAAGGGAAC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAGAGAAGTTACAGCCTaGAAGGCCCGTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIREVTA*KARSSS
Trigger: GGAGCTTGAACGGGCCTTGCAGGCTGTAACTTCTCT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAGAGAAGTTACAGCCTaGAAGGCCCGTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIREVTA*KARSSS
Trigger: GGAGCTTGAACGGGCCTTGCAGGCTGTAACTTCTCT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACCCCTGGATCTGCCCTaGCAGGGGTGTAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILPLDLP*QGCRWV
Trigger: AACCCACCTACACCCCTGGCAGGGCAGATCCAGGGG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGGGTTGGGAGCAAGTaGTGCGCCATGATGGGCATC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFWVGSK*CAMMGI
Trigger: GATGCCCATCATGGCGCAGCACTTGCTCCCAACCCA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGAGCTGTGGCTGGGCTaGAGGTCCTTAGGAATGCCA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFELWLG*RSLGMP
Trigger: TGGCATTCCTAAGGACCTGCAGCCCAGCCACAGCTC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCTGCCACACACCATTTaGTGTCTCTTATACAGGAAC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCLPHTI*CLLYRN
Trigger: GTTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGGACAGCTGCTTCCTaGACTGCACAAAAACACACG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGTAAS*TAQKHT
Trigger: CGTGTGTTTTTGTGCAGTGCAGGAAGCAGCTGTCCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCCTCACTTTCCAACTTaGTCCCCATGCCTACTATTT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCPHFPT*SPCLLF
Trigger: AAATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTGGAGGAGAGGAGATTaGCTTACACGTGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVWRRGD*LTRALL
Trigger: CAGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAGGAATCCTCTAAATTaGCTCATTAAACTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKRNPLN*LIKLES
Trigger: ACTCTCCAGTTTAATGAGGCAATTTAGAGGATTCCT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGGTGTGGCATTTAGCTaGACTGGAGCCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIGVAFS*TGAFCT
Trigger: AGTGCAGAAGGCTCCAGTGCAGCTAAATGCCACACC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCCAATGCCACAAGTATaGCTGTCCACCAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVPMPQV*LSTRTG
Trigger: CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCAATGCCGCACCCAATaGCACAAGTATGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIQCRTQ*HKYACP
Trigger: TGGACAGGCATACTTGTGGCATTGGGTGCGGCATTG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGGTTGGTGCAGCGTTaGCTGTTATACTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGLVQR*LLYLAT
Trigger: TGTGGCCAAGTATAACAGCCAACGCTGCACCAACCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGCCATGGTATCCATCTaGTGCCTGACCTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIAMVSI*CLTFTS
Trigger: TGAGGTGAAGGTCAGGCACCAGATGGATACCATGGC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGACCCTTGCCCCAGGTaGAGAGAGGGACATTCCATC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFDPCPR*REGHSI
Trigger: GATGGAATGTCCCTCTCTCCACCTGGGGCAAGGGTC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCCTGCATTGGTAGGCTaGTGTTCTGAGGTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIPALVG*CSEVEV
Trigger: CACCTCAACCTCAGAACACCAGCCTACCAATGCAGG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCAGTGGGAGCCCTACTaGATGGCAGGAGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYQWEPY*MAGGAE
Trigger: CTCTGCCCCTCCTGCCATCCAGTAGGGCTCCCACTG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGGATCCGGTCAGTCCTaGGTGGGTCCACAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILGSGQS*VGPQWE
Trigger: CTCCCACTGTGGACCCACCCAGGACTGACCGGATCC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTCCATGAAACTGTCCTaGGAAGGCTCTCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISMKLS*EGSLPK
Trigger: CTTGGGGAGAGAGCCTTCCCAGGACAGTTTCATGGA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCACATCACTTCACAACTaGTACACTGATTCTACAAGT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPATSLHN*YTDSTS
Trigger: ACTTGTAGAATCAGTGTACCAGTTGTGAAGTGATGT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGACATCACTTCACAACTaGTACACTGATTCTACAAGT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKTSLHN*YTDSTS
Trigger: ACTTGTAGAATCAGTGTACCAGTTGTGAAGTGATGT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCATTGCCTCATTAAACTaGAGAGTTCTGTTGACCATT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAIASLN*RVLLTI
Trigger: AATGGTCAACAGAACTCTCCAGTTTAATGAGGCAAT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTCTTCGGGACTGTGGTaGGCAGACGCAAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFSSGLW*ADARRR
Trigger: TCGCCTTCTTGCGTCTGCCCACCACAGTCCCGAAGA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCAGTCGGCTTATACATaGGAAGTGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIQSAYT*EVWREG
Trigger: GCCTTCTCTCCACACTTCTCATGTATAAGCCGACTG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTCTGACGCATGTCTTTaGTATCTGAGGGTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVSDACL*YLRVSR
Trigger: CCGGGAAACCCTCAGATATCAAAGACATGCGTCAGA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCGCATCATCATCATCTaGCGCATGTCTTTGATATCT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCRIIII*RMSLIS
Trigger: AGATATCAAAGACATGCGTCAGATGATGATGATGCG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAGTTCTTGTATTAACTaGCCAGTGCATTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSSCIN*PVHSGS
Trigger: AGAACCAGAATGCACTGGTCAGTTAATACAAGAACT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCTCTGCTGCTGGTGCTaGACTTTACGGGAGTTATCT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPILCCWC*TLRELS
Trigger: AGATAACTCCCGTAAAGTTCAGCACCAGCAGCAGAG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGATTGCTGTCGTGAGGTaGTTAGGTCATCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVIAVVR*LGHLPC
Trigger: GCAAGGCAGATGACCTAATCACCTCACGACAGCAAT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGCAAGTGCTGCGCCATaGTGGGCATCTCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFASAAP*WASLLK
Trigger: TTTCAGCAGAGATGCCCATCATGGCGCAGCACTTGC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGGCCAAAGGCTGCGCTaGACTGAGGGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILGQRLR*TEGVAA
Trigger: AGCAGCAACTCCCTCAGTTCAGCGCAGCCTTTGGCC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTCCACAAGGAATCCCTaGGACATACTCAATACTATA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSTRNP*DILNTI
Trigger: TATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCCATTAACCAGCAACTaGAGGGAGAAATGGCACCAG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIPLTSN*REKWHQ
Trigger: CTGGTGCCATTTCTCCCTTCAGTTGCTGGTTAATGG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCCGTTGAGTCGCCTCTaGTTGCACAGTTTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFPLSRL*LHSLGL
Trigger: TAGCCCCAAACTGTGCAAGCAGAGGCGACTCAACGG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTTCCCGGATGGACCATaGAACCTGGTAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYFPDGP*NLVGRG
Trigger: GCCTCGCCCTACCAGGTTGCATGGTCCATCCGGGAA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGCTGGTTCGACTGCATaGAGCTCTCCGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFAGSTA*SSPQFL
Trigger: CAAGAACTGCGGAGAGCTGCATGCAGTCGAACCAGC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTTATGCTGGTTCGACTaGATGCAGCTCTCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRILCWFD*MQLSAV
Trigger: AACTGCGGAGAGCTGCATGCAGTCGAACCAGCATAA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAACTGCCCCTGGATCTaGCCTGCCAGGGGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYNCPWI*PARGVG
Trigger: ACCTACACCCCTGGCAGGGCAGATCCAGGGGCAGTT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTGGAGCCTTCTGCACTaGGTGTTGAAAATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCWSLLH*VLKIFP
Trigger: TGGAAAAATTTTCAACACGCAGTGCAGAAGGCTCCA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTCCAGTGTAAAAAGGTaGTTCACTAGTTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASSVKR*FTSLFC
Trigger: ACAAAACAAACTAGTGAAGCACCTTTTTACACTGGA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTATCTCTCACACACGTaGCCCCAATGTATATTTTTG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCYLSHT*PQCIFL
Trigger: CAAAAATATACATTGGGGGCACGTGTGTGAGAGATA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCTACCTTCCTCTCTCTaGAAGTTCTTGAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCLPSSL*KFLRCN
Trigger: ATTACATCTCAAGAACTTGCAGAGAGAGGAAGGTAG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGAGAGGCGCTGGCAATaGACTAGGAAGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILERRWQ*TRKLGC
Trigger: GCAGCCGAGCTTCCTAGTCCATTGCCAGCGCCTCTC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGAGAGGCGCTGGCAATaGACTAGGAAGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYERRWQ*TRKLGC
Trigger: GCAGCCGAGCTTCCTAGTCCATTGCCAGCGCCTCTC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCCAAGTACCTGCAAGTaGCTGTTGCAGTACCTACGA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVPSTCK*LLQYLR
Trigger: TCGTAGGTACTGCAACAGCCACTTGCAGGTACTTGG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAAAGTTGAGTCACCCTaGAGCTCCTACTCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVKVESP*SSYSPH
Trigger: ATGCGGAGAGTAGGAGCTCCAGGGTGACTCAACTTT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGGTCCGGCTTATGCTaGTTCGACTGCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFWSGLC*FDCMQL
Trigger: GAGCTGCATGCAGTCGAACCAGCATAAGCCGGACCA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTCAAGAGGATATGTTaGAAACAATGTCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: VQIICACAFFGTVVGRRKFKRIC*KQCLVN
Trigger: ATTCACCAGACATTGTTTCCAACATATCCTCTTGAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAGCCTCTTCGGTAGTTaGGAGGAGGTCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISLFGS*EEVSIL
Trigger: AAGAATGGAGACCTCCTCCCAACTACCGAAGAGGCT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAGCCTCTTCGGTAGTTaGGAGGAGGTCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVSLFGS*EEVSIL
Trigger: AAGAATGGAGACCTCCTCCCAACTACCGAAGAGGCT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTACCACGCCTCCAAGTaGCACCTCAAGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFYHASK*HLKLGW
Trigger: CCAACCCAACTTGAGGTGCCACTTGGAGGCGTGGTA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAAGTGGTGGGTGGCGTaGATAGGGAAGTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVKWWVA*IGKWKE
Trigger: TTCTTTCCACTTCCCTATCCACGCCACCCACCACTT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCGAAGGCAGGCTGTGTaGTCTCTGAGTTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFRRQAV*SLSSKW
Trigger: CCACTTCGAACTCAGAGACCACACAGCCTGCCTTCG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTTCAAAAGAAGGGACTaGTTAGAACTAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCFKRRD*LELAWH
Trigger: ATGCCATGCTAGTTCTAACCAGTCCCTTCTTTTGAA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAGCTGTGCTGCCCTATaGAGCTCACTGAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISCAAL*SSLRVR
Trigger: TCTAACTCTCAGTGAGCTCCATAGGGCAGCACAGCT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCACCTGTCTCATTTGCTaGTTTCAAATAAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCTCLIC*FQISYL
Trigger: GAGGTAGCTTATTTGAAACCAGCAAATGAGACAGGT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGTACCTACGATCCTCTaGTTTGGGGATGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFVPTIL*FGDGVG
Trigger: ACCAACCCCATCCCCAAATCAGAGGATCGTAGGTAC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAGGCTGTGGCTTTCATaGGGATCCGGTCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILRLWLS*GSGQSW
Trigger: CCAGGACTGACCGGATCCTCATGAAAGCCACAGCCT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCTTGGCTGTGCAACTTaGGAAGAGCTGCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFLGCAT*EELLRV
Trigger: CACTCTCAGCAGCTCTTCTCAAGTTGCACAGCCAAG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCCCTATTCCTCTATCTaGCAACTCCTGGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFPYSSI*QLLDWH
Trigger: GTGCCAGTCCAGGAGTTGTCAGATAGAGGAATAGGG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCAAGGATTGTATTCCTaGAGCTCCAGTACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVQGLYS*SSSTCG
Trigger: TCCACAGGTACTGGAGCTTCAGGAATACAATCCTTG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGGGGTCTCCAAGGTTaGCAGGGAGATTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYRGLQG*QGDCPS
Trigger: ACTGGGGCAATCTCCCTGTCAACCTTGGAGACCCCT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAAGGCTGCGCTGAACTaGGGGAGTTGCTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILKAALN*GSCCLG
Trigger: TCCCAAGCAGCAACTCCCTCAGTTCAGCGCAGCCTT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTCACAACTGGTACACTaGTTCTACAAGTGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCSQLVH*FYKCLN
Trigger: GTTAAGACACTTGTAGAATCAGTGTACCAGTTGTGA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCAAAAGAGATACAAATaGGGACTGTTCAGTATGATG +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCQKRYK*GLFSMM
Trigger: CATCATACTGAACAGTCCTCATTTGTATCTCTTTTG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCGAAAAAGAAGGGCTTTaGGAACCGCTAGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIEKEGL*EPLVLA
Trigger: AGCAAGGACTAGCGGTTCTCAAAGCCCTTCTTTTTC...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGCCACATATTCACATTaGTTGAAGGGGGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIATYSH*LKGAVL
Trigger: CAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGATGGTATCCATCTGGTaGCTGACCTTCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVMVSIW*LTFTSS
Trigger: AGATGAGGTGAAGGTCAGGCACCAGATGGATACCAT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGTCTCTCTCTGGCGCTaGCGATTCTGGGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILVSLWR*RFWANL
Trigger: CAAGTTGGCCCAGAATCGGCAGCGCCAGAGAGAGAC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGTGGGTGCCACTCCCTaGATTGGTAGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYVGATP*IGRLVF
Trigger: GAACACCAGCCTACCAATGCAGGGAGTGGCACCCAC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGTGAGACAACTGCCGTaGTTGTGCTATAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIVRQLP*LCYSVC
Trigger: ACACACACTATAGCACAAGCACGGCAGTTGTCTCAC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACACGGTTCCACTGCATaGTGCTGGTTCCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILHGSTA*CWFHLP
Trigger: AGGGAGGTGGAACCAGCAGCATGCAGTGGAACCGTG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCTGCAAACTTGGCTGTaGAACTTGAGAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVLQTWL*NLRRAA
Trigger: AGCAGCTCTTCTCAAGTTGCACAGCCAAGTTTGCAG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGTCAGAATCTTGACCTaGCACACACCATTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIVRILT*HTPFAV
Trigger: GACAGCAAATGGTGTGTGGCAGGTCAAGATTCTGAC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGGAGGAGAGGAGATTaGCTTACACGTGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFWRRGD*LTRALL
Trigger: CAGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCAGTTTGACCCACAACTaGAGCATTAATGACACTGTT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCSLTHN*SINDTV
Trigger: AACAGTGTCATTAATGCTGCAGTTGTGGGTCAAACT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGGTGTGGCATTTAGCTaGACTGGAGCCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFGVAFS*TGAFCT
Trigger: AGTGCAGAAGGCTCCAGTGCAGCTAAATGCCACACC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCCAATGCCACAAGTATaGCTGTCCACCAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFPMPQV*LSTRTG
Trigger: CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCAATGCCGCACCCAATaGCACAAGTATGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFQCRTQ*HKYACP
Trigger: TGGACAGGCATACTTGTGGCATTGGGTGCGGCATTG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATGGTCCTCCCAGCAATaGCGCACCCAATGCCACAAG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILWSSQQ*RTQCHK
Trigger: CTTGTGGCATTGGGTGCGGCATTGCTGGGAGGACCA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTGGTCCTCCCAGCAATaGCGCACCCAATGCCACAAG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYWSSQQ*RTQCHK
Trigger: CTTGTGGCATTGGGTGCGGCATTGCTGGGAGGACCA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTCTGCTTGCACAGTTTaGGGCTATATGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISACTV*GYMSTR
Trigger: CCTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTCTGCTTGCACAGTTTaGGGCTATATGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVSACTV*GYMSTR
Trigger: CCTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGGGTTGGTGCAGCGTTaGCTGTTATACTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFGLVQR*LLYLAT
Trigger: TGTGGCCAAGTATAACAGCCAACGCTGCACCAACCC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGCCATGGTATCCATCTaGTGCCTGACCTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFAMVSI*CLTFTS
Trigger: TGAGGTGAAGGTCAGGCACCAGATGGATACCATGGC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTTCCATCCAGTCCGTTaGGCATCTTCAAGGCCAACG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFFHPVR*ASSRPT
Trigger: CGTTGGCCTTGAAGATGCCCAACGGACTGGATGGAA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCTCATTGAAAGCAAATaGGTCTTCCAATTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCLIESK*VFQFGF
Trigger: GAAACCGAATTGGAAGACCCATTTGCTTTCAATGAG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGGGCAAGGACCCCAATaGTACTCAGGCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILGQGPQ*YSGTRE
Trigger: CTCTCGAGTGCCTGAGTACCATTGGGGTCCTTGCCC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGCGTGGATAGGGAAGTaGAAAGAAGATGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIAWIGK*KEDVHL
Trigger: CAGATGGACATCTTCTTTCCACTTCCCTATCCACGC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCACTCTTCGGGCGGGATaGGTACAGATCATATGTGCG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFTLRAG*VQIICA
Trigger: CGCACATATGATCTGTACCCATCCCGCCCGAAGAGT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGATTCAATAGATCTGTaGTCCCATCACCACAATAGA +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCDSIDL*SHHHNR
Trigger: TCTATTGTGGTGATGGGACCACAGATCTATTGAATC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAGCTACTCAGTAAAATaGCTCAAACCCCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISYSVK*LKPQPL
Trigger: GAGAGGCTGGGGTTTGAGCCATTTTACTGAGTAGCT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCCTGTCCACCAGAACTaGGGGCTCTTACCAAAACCT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFPVHQN*GLLPKP
Trigger: AGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTTAAGGGGAAATCCCTaGATATACTCTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVLRGNP*IYSPAK
Trigger: CTTGGCTGGAGAGTATATTCAGGGATTTCCCCTTAA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCTCTGCTGCTGGTGCTaGACTTTACGGGAGTTATCT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFLCCWC*TLRELS
Trigger: AGATAACTCCCGTAAAGTTCAGCACCAGCAGCAGAG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACCCATAGCGACCTTCTaGACTAACCTGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILPIATF*TNLEER
Trigger: CCTCTCCTCCAGGTTAGTTCAGAAGGTCGCTATGGG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTGCTTGCTCTCTCTCTaGAACGTCACATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPICLLSL*NVTFPL
Trigger: AAGAGGAAATGTGACGTTTCAGAGAGAGAGCAAGCA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCATTCTGAAGCTGAGATaGGAGCCTGGAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFILKLR*EPGGER
Trigger: CCTTTCTCCTCCAGGCTCTCATCTCAGCTTCAGAAT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCATACAACAGAGACAATaGGAAAGTAACTCCAATACC +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCIQQRQ*ESNSNT
Trigger: GGTATTGGAGTTACTTTCTCATTGTCTCTGTTGTAT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCTAGGAGATGGTGGCTaGCATACACTAACGGAAATA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPILGDGG*HTLTEI
Trigger: TATTTCCGTTAGTGTATGTCAGCCACCATCTCCTAG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCATAAAGCCAAGTACCTaGAAGTGGCTGTTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIIKPST*KWLLQY
Trigger: GTACTGCAACAGCCACTTGCAGGTACTTGGCTTTAT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTATAAAGCCAAGTACCTaGAAGTGGCTGTTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIIKPST*KWLLQY
Trigger: GTACTGCAACAGCCACTTGCAGGTACTTGGCTTTAT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTTGCAGACTGAACCCTaGGGTGGCGCTGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYLQTEP*GGAGGF
Trigger: AAAACCTCCAGCGCCACCGCAGGGTTCAGTCTGCAA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGAGGTTGAGGTGACTTaGAGACTGAACCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYEVEVT*RLNPAV
Trigger: CACCGCAGGGTTCAGTCTGCAAGTCACCTCAACCTC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAGTTTCACCAGTCTCTaGAGTCGGCTTATACATGAG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISFTSL*SRLIHE
Trigger: CTCATGTATAAGCCGACTGCAGAGACTGGTGAAACT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTCTGCTGAAAGTAAGTaGAAAGTTGAGTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISAESK*KVESPW
Trigger: CCAGGGTGACTCAACTTTGCACTTACTTTCAGCAGA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCCTTCACGGTTCCACTaGATGCTGCTGGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYPSRFH*MLLVPP
Trigger: AGGTGGAACCAGCAGCATGCAGTGGAACCGTGAAGG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGTTGGGAGCAAGTGCTaGGCCATGATGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYVGSKC*AMMGIS
Trigger: AGAGATGCCCATCATGGCGCAGCACTTGCTCCCAAC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAAGAAGATGTCCATCTaGGCCGAGAAGGTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIKKMSI*AEKVAK
Trigger: TTTAGCAACCTTCTCGGCGCAGATGGACATCTTCTT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCTGCCACACACCATTTaGTGTCTCTTATACAGGAAC +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPILPHTI*CLLYRN
Trigger: GTTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCCTCACTTTCCAACTTaGTCCCCATGCCTACTATTT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIPHFPT*SPCLLF
Trigger: AAATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAAGGGGAACTTTGGGTaGATACAGAGCTTACTTCAG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIKGNFG*IQSLLQ
Trigger: CTGAAGTAAGCTCTGTATGCACCCAAAGTTCCCCTT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAATGAAACCAGGAGATaGTGCAAAAATACAACTGTA +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCNETRR*CKNTTV
Trigger: TACAGTTGTATTTTTGCAGCATCTCCTGGTTTCATT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCATCATTACATACAACTaGCACTGCAGTGACAATATT +
Preference number: 4 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCIITYN*HCSDNI
Trigger: AATATTGTCACTGCAGTGGCAGTTGTATGTAATGAT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCAGAGTGAGAGGCGCTaGCAATGGACTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYQSERR*QWTRKL
Trigger: GAGCTTCCTAGTCCATTGCCAGCGCCTCTCACTCTG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCAGTCCAAACCTAAATaGGGAAACAGATCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVQSKPK*GNRSVS
Trigger: GGACACTGATCTGTTTCCCCATTTAGGTTTGGACTG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTACAATGTCTGGTGAATaGAAGGGCTTTGTTAGCGCA +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRITMSGE*KGFVSA
Trigger: TGCGCTAACAAAGCCCTTCCATTCACCAGACATTGT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCAATTCCAAGTCATGTaGAATGTCAGTGATCTCATT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCQFQVM*NVSDLI
Trigger: AATGAGATCACTGACATTCCACATGACTTGGAATTG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCTGAGTTCGAAGTGGTaGGTGGCGTGGATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYLSSKW*VAWIGK
Trigger: CTTCCCTATCCACGCCACCCACCACTTCGAACTCAG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGATCACAATTACGAATaGAATCCTGGCCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVDHNYE*NPGLTV
Trigger: CACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTTCCAAGGGGAACTTTaGGTGCATACAGAGCTTACT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIFQGEL*VHTELT
Trigger: AGTAAGCTCTGTATGCACCCAAAGTTCCCCTTGGAA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAAACAGTCTGGTCTGTaGAACATCTCCACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVKQSGL*NISTSE
Trigger: CTCTGAAGTGGAGATGTTCCACAGACCAGACTGTTT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTGCTCCCAGGGTCGGTaGTTATTAAGGGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYCSQGR*LLRGNP
Trigger: GGGATTTCCCCTTAATAATCACCGACCCTGGGAGCA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCAGTTTGGGGCTATATaGGCACAAGGGCTTATTGTC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFQFGAI*AQGLIV
Trigger: GACAATAAGCCCTTGTGCTCATATAGCCCCAAACTG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCATATTCACATTGCTTaGAGGGGGCAGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFHIHIA*RGQSCP
Trigger: AGGACAAGACTGCCCCCTTCAAGCAATGTGAATATG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGTACCTACGATCCTCTaGTTTGGGGATGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYVPTIL*FGDGVG
Trigger: ACCAACCCCATCCCCAAATCAGAGGATCGTAGGTAC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCAATGGAGACTAAACTaGACTGCTGGGAATGGACAG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFQWRLN*TAGNGQ
Trigger: CTGTCCATTCCCAGCAGTTCAGTTTAGTCTCCATTG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGACTGTGATCACAGATTaGGAACAAGCTCTGATAAGG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVTVITD*EQALIR
Trigger: CCTTATCAGAGCTTGTTCTCAATCTGTGATCACAGT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCCCTATGGAGCTCACTaGGAGTTAGATTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIPYGAH*ELDFSL
Trigger: AAGAGAAAAATCTAACTCTCAGTGAGCTCCATAGGG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCCCTATGGAGCTCACTaGGAGTTAGATTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIPYGAH*ELDFSL
Trigger: AAGAGAAAAATCTAACTCTCAGTGAGCTCCATAGGG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTACCCTTCCAAACAGATaGAGACAATGTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRITLPNR*RQCQQV
Trigger: CACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTTTTATGCTCGAAAGTaGGAGGCTGATCTTAGAACC +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVFYARK*EADLRT
Trigger: GGTTCTAAGATCAGCCTCTCACTTTCGAGCATAAAA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCATTGGTGAATTAAGTTaGTCTAGGAGATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIIGELS*SRRWWL
Trigger: CAGCCACCATCTCCTAGATCAACTTAATTCACCAAT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGTTAAAGGCTACTTCTaGTATCAGGTTCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVVKGYF*YQVPAK
Trigger: CTTAGCTGGAACCTGATATCAGAAGTAGCCTTTAAC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGTTAAAGGCTACTTCTaGTATCAGGTTCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIVKGYF*YQVPAK
Trigger: CTTAGCTGGAACCTGATATCAGAAGTAGCCTTTAAC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGAAAAAGAAGGGCTTTaGGAACCGCTAGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFEKEGL*EPLVLA
Trigger: AGCAAGGACTAGCGGTTCTCAAAGCCCTTCTTTTTC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGCCACATATTCACATTaGTTGAAGGGGGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFATYSH*LKGAVL
Trigger: CAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCCTGCAAGTGGCTGTTaGAGTACCTACGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYPASGC*STYDPL
Trigger: CAGAGGATCGTAGGTACTGCAACAGCCACTTGCAGG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGTTCCCTTGGGGGACTaGAGGTGGAATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILVPLGD*RWNGFL
Trigger: CAAAAACCCATTCCACCTGCAGTCCCCCAAGGGAAC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTTAGGTCATCTGCCTTaGTCAGCAGCTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYLGHLP*SAAGQD
Trigger: ATCCTGCCCAGCTGCTGAGCAAGGCAGATGACCTAA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAGTGTGAGTGATCACTaGTGTATTGCTGTCGTGAGG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFSVSDH*CIAVVR
Trigger: CCTCACGACAGCAATACAGCAGTGATCACTCACACT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGGAAAGGGAGAAGATaGATTATTGGTACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGKGRR*IIGTCS
Trigger: GCTACAAGTACCAATAATGCATCTTCTCCCTTTCCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGCTGCTTCCTGCACTaGACAAAAACACACGCGTGG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSCFLH*TKTHAW
Trigger: CCACGCGTGTGTTTTTGTGCAGTGCAGGAAGCAGCT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCATACCCAATTTGCTTaGTCTCTCTCTGAAACGTCA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVHTQFA*SLSETS
Trigger: TGACGTTTCAGAGAGAGAGCAAGCAAATTGGGTATG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGGTACAGATCATATGTaGGTGTGCATTCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFGTDHM*VCILRD
Trigger: GTCCCGAAGAATGCACACGCACATATGATCTGTACC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTCCATGAAACTGTCCTaGGAAGGCTCTCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSMKLS*EGSLPK
Trigger: CTTGGGGAGAGAGCCTTCCCAGGACAGTTTCATGGA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGAGAAGGTTGCTAAATaGAGAGGGGTCTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFEKVAK*RGVSKV
Trigger: AACCTTGGAGACCCCTCTCCATTTAGCAACCTTCTC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTTCAAAAGCAAAAGATaGATCAAGGAGTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCFKSKR*IKELTD
Trigger: ATCTGTCAACTCCTTGATCCATCTTTTGCTTTTGAA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGCCTCAGCTTTCATCATaGGCATCCAAACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVPQLSS*ASKRKC
Trigger: ACATTTTCGTTTGGATGCCCATGATGAAAGCTGAGG...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCCTCAGCTTTCATCATaGGCATCCAAACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIPQLSS*ASKRKC
Trigger: ACATTTTCGTTTGGATGCCCATGATGAAAGCTGAGG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAGGCGAAAGAGAAGATaGAAAGCTGTGCTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFRRKRR*KAVLPY
Trigger: ATAGGGCAGCACAGCTTTCCATCTTCTCTTTCGCCT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTCAGCACTAATCCACTaGAGCCAACTGTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISALIH*SQLYLN
Trigger: ATTAAGGTACAGTTGGCTCCAGTGGATTAGTGCTGA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTCAGCACTAATCCACTaGAGCCAACTGTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISALIH*SQLYLN
Trigger: ATTAAGGTACAGTTGGCTCCAGTGGATTAGTGCTGA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 72 bp TTGAGAACCGCTAGTCCTTGCTACCGTGCAGTTTCTTaGTTAGAAGAGATTTTAAAACTGTCCAACCTGTCT +
Preference number: 4 (lower is better)
Translates to: LRTASPCYRAVS*LEEILKLSNLS
Trigger: AGACAGGTTGGACAGTTTTAAAATCTCTTCTAACAAAGAAACTGCACGGTAGCAAGGACTAGCGGTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 72 bp CTCCCAGCCACTATGAACACAAATACAGAGGAGAGATaGTCAGTTTGTAAGTTCCCTTTAAGCGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LPATMNTNTEER*SVCKFPLSGFY
Trigger: ATAAAAGCCGCTTAAAGGGAACTTACAAACTGACAATCTCTCCTCTGTATTTGTGTTCATAGTGGCTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACAGTCGGCTTATACATaGGAAGTGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILQSAYT*EVWREG
Trigger: GCCTTCTCTCCACACTTCTCATGTATAAGCCGACTG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAGTTCTTGTATTAACTaGCCAGTGCATTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISSCIN*PVHSGS
Trigger: AGAACCAGAATGCACTGGTCAGTTAATACAAGAACT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTCACACAGAGGTGTCTaGTGTGTAATGTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISHRGV*CVMSKT
Trigger: AGTTTTTGACATTACACATCAGACACCTCTGTGTGA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGGTGAGGAGTGTGAGTaGTCACTGCTGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILGEECE*SLLYCC
Trigger: ACAGCAATACAGCAGTGATCACTCACACTCCTCACC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTCCACAAGGAATCCCTaGGACATACTCAATACTATA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISTRNP*DILNTI
Trigger: TATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGATAGCTATACACCTTaGCACGGCAGAGATCCAGTG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYDSYTP*HGRDPV
Trigger: CACTGGATCTCTGCCGTGTCAAGGTGTATAGCTATC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAACTCCCAGCCACTATaGACACAAATACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFNSQPL*TQIQRR
Trigger: TCTCCTCTGTATTTGTGTTCATAGTGGCTGGGAGTT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCCTTTGATTTCCCACTaGAACTTGGTTTCAACTTAC +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIPLISH*NLVSTY
Trigger: GTAAGTTGAAACCAAGTTGCAGTGGGAAATCAAAGG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCCCATCTCCTCATCTTaGTCCTACAGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYPISSS*SYSLCR
Trigger: TCTGCACAGACTGTAGGAGCAAGATGAGGAGATGGG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCCAAGTACCTGCAAGTaGCTGTTGCAGTACCTACGA +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYPSTCK*LLQYLR
Trigger: TCGTAGGTACTGCAACAGCCACTTGCAGGTACTTGG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGTAATGTCAAAAACTaGCACAGAGCACTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFCNVKN*HRALLS
Trigger: GGACAGCAGTGCTCTGTGCCAGTTTTTGACATTACA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTCTGAAAAGTCCTCCTaGTTCAATTCCAAGTCATGT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISEKSS*FNSKSC
Trigger: ACATGACTTGGAATTGAACCAGGAGGACTTTTCAGA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAAACACAGATCTCTCTaGGCTTATAGATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVKHRSL*AYRCSP
Trigger: AGGAGAACATCTATAAGCCCAGAGAGATCTGTGTTT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGATTCAATAGATCTGTaGTCCCATCACCACAATAGA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVDSIDL*SHHHNR
Trigger: TCTATTGTGGTGATGGGACCACAGATCTATTGAATC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCACCTGTCTCATTTGCTaGTTTCAAATAAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPITCLIC*FQISYL
Trigger: GAGGTAGCTTATTTGAAACCAGCAAATGAGACAGGT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACATATTCACATTGCTTaGAGGGGGCAGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILHIHIA*RGQSCP
Trigger: AGGACAAGACTGCCCCCTTCAAGCAATGTGAATATG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCATCATCTTCCTCATTaGAAGCAAATGGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFHHLPH*KQMGLP
Trigger: TGGAAGACCCATTTGCTTTCAATGAGGAAGATGATG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGATCAGTGTCCAACTaGTGTTTCTGGGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYRSVSN*CFWVHS
Trigger: ACTGTGCACCCAGAAACATCAGTTGGACACTGATCT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACAAGGATTGTATTCCTaGAGCTCCAGTACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILQGLYS*SSSTCG
Trigger: TCCACAGGTACTGGAGCTTCAGGAATACAATCCTTG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATATCCAGTCACTGTGCTaGACCACTAAGGAAACCACT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYIQSLC*TTKETT
Trigger: AGTGGTTTCCTTAGTGGTTCAGCACAGTGACTGGAT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAATCCAGTCACTGTGCTaGACCACTAAGGAAACCACT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILIQSLC*TTKETT
Trigger: AGTGGTTTCCTTAGTGGTTCAGCACAGTGACTGGAT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTGCAAATGTATTCCATaGGAGAGGGATTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRICKCIP*ERDLET
Trigger: TGTTTCTAAATCCCTCTCTCATGGAATACATTTGCA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCTTTTCAAATCTATCTaGCCTATCCTGCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPILFKSI*PILLFH
Trigger: GTGAAAAAGCAGGATAGGTCAGATAGATTTGAAAAG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGATGGATCAAGGAGTTaGCAGATCCCATCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFDGSRS*QIPSFQ
Trigger: TTGAAAAGATGGGATCTGTCAACTCCTTGATCCATC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCACTGATCATAGCCAGTaGATATCACACATTAGAATG +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPITDHSQ*ISHIRM
Trigger: CATTCTAATGTGTGATATTCACTGGCTATGATCAGT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACACTGCCTGCCAACATaGAATTGCTCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILHCLPT*NCSGSH
Trigger: ATGACTTCCTGAGCAATTTCATGTTGGCAGGCAGTG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCACCCTTCCAAACAGATaGAGACAATGTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFTLPNR*RQCQQV
Trigger: CACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCAAGAGGCTAACATGTaGCCTTGTATGCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFQEANM*PCMLSI
Trigger: AATGGAAAGCATACAAGGTCACATGTTAGCCTCTTG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGGAGGGGGACTAAAGTaGTCTTGTCGAACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFGGGLK*SCRTFK
Trigger: TTTAAAAGTTCGACAAGAGCACTTTAGTCCCCCTCC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGTGAGACAACTGCCGTaGTTGTGCTATAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILVRQLP*LCYSVC
Trigger: ACACACACTATAGCACAAGCACGGCAGTTGTCTCAC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTAGGAATCCTCTAAATTaGCTCATTAAACTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIRNPLN*LIKLES
Trigger: ACTCTCCAGTTTAATGAGGCAATTTAGAGGATTCCT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAAGGAAAAAGTCCTATaGAAGACACTGTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFKEKVL*KTLWAT
Trigger: TGTAGCCCACAGTGTCTTGCATAGGACTTTTTCCTT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGACTTTTGTCTGTGTGTaGATAAGAGCTTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVTFVCV*IRALKA
Trigger: TGCCTTTAAAGCTCTTATGCACACACAGACAAAAGT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGGTGATATATTTCCCTaGAGCATGGGAGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFGDIFP*SMGVVN
Trigger: GTTAACTACTCCCATGCTGCAGGGAAATATATCACC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTCTATTTCAAGCACATaGAACTTGGAACTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVSISST*NLELAK
Trigger: TTTTGCGAGTTCCAAGTTGCATGTGCTTGAAATAGA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGAGTACGATGTTGTGTaGGGAGAGGTGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYEYDVV*GEVIWS
Trigger: TGACCATATCACCTCTCCCCACACAACATCGTACTC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCTTAATGATGCAGGTTaGAGTCATTTTAGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRILNDAG*SHFRAN
Trigger: ATTTGCCCTAAAATGACTCCAACCTGCATCATTAAG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGCTACTCAGTAAAATaGCTCAAACCCCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSYSVK*LKPQPL
Trigger: GAGAGGCTGGGGTTTGAGCCATTTTACTGAGTAGCT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCGAGGTAACTACTCGTaGCCACTTCATTACAGTACA +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYRGNYS*PLHYST
Trigger: TGTACTGTAATGAAGTGGTCACGAGTAGTTACCTCG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACTCTCTGCAAGTTCTTaGGATGTAATCTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILLSASS*DVICCQ
Trigger: TTGGCAGCAGATTACATCTCAAGAACTTGCAGAGAG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAACTCCCAGCCACTATaGACACAAATACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYNSQPL*TQIQRR
Trigger: TCTCCTCTGTATTTGTGTTCATAGTGGCTGGGAGTT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATATGAGGAAGTCAATGTaGTGCTCTGCGACAACCTTT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYMRKSM*CSATTF
Trigger: AAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCAT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAATGAGGAAGTCAATGTaGTGCTCTGCGACAACCTTT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILMRKSM*CSATTF
Trigger: AAAGGTTGTCGCAGAGCAGCACATTGACTTCCTCAT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAAGGGGAACTTTGGGTaGATACAGAGCTTACTTCAG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILKGNFG*IQSLLQ
Trigger: CTGAAGTAAGCTCTGTATGCACCCAAAGTTCCCCTT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAATGAAACCAGGAGATaGTGCAAAAATACAACTGTA +
Preference number: 4 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVNETRR*CKNTTV
Trigger: TACAGTTGTATTTTTGCAGCATCTCCTGGTTTCATT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAGTTTTCTAGAGAGCTaGAGCAAAGTTAATACAGAA +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISFLES*SKVNTE
Trigger: TTCTGTATTAACTTTGCTGCAGCTCTCTAGAAAACT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAAGGATACCACAGTTTaGAATGCCGCAGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYKDTTV*NAAESG
Trigger: TCCTGATTCTGCGGCATTCCAAACTGTGGTATCCTT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTTCAAGAGGATATGTTaGAAACAATGTCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIFKRIC*KQCLVN
Trigger: ATTCACCAGACATTGTTTCCAACATATCCTCTTGAA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGTCCATCTGCAAACTTaGCTGTGCAACTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYVHLQT*LCNLRR
Trigger: TCTTCTCAAGTTGCACAGCCAAGTTTGCAGATGGAC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTGTAATGTCAAAAACTaGCACAGAGCACTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYCNVKN*HRALLS
Trigger: GGACAGCAGTGCTCTGTGCCAGTTTTTGACATTACA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCAATAGTAAAGGGCACTaGTATTCTGAGGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFNSKGH*YSEVSS
Trigger: GGAAGATACCTCAGAATACCAGTGCCCTTTACTATT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACATCATCTTCCTCATTaGAAGCAAATGGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILHHLPH*KQMGLP
Trigger: TGGAAGACCCATTTGCTTTCAATGAGGAAGATGATG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATTCTGCACTGCGTGTTaGAAATTTTTCCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILFCTAC*KFFQGE
Trigger: TTCCCCTTGGAAAAATTTTCAACACGCAGTGCAGAA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAAATCACCCCAGCTTTaGAATATGCACGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILKSPQL*NMHGEM
Trigger: CATTTCACCGTGCATATTTCAAAGCTGGGGTGATTT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAACAAAGCTCCTCAAGTaGATCTCCAGCTCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILTKLLK*ISSSFL
Trigger: TAAGAAAGAGCTGGAGATTCACTTGAGGAGCTTTGT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGAGACTAAACTGAACTaGTGGGAATGGACAGTTATC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYETKLN*WEWTVI
Trigger: GATAACTGTCCATTCCCAGCAGTTCAGTTTAGTCTC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTCTATTTCAAGCACATaGAACTTGGAACTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFSISST*NLELAK
Trigger: TTTTGCGAGTTCCAAGTTGCATGTGCTTGAAATAGA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCCAATTCCAAGTCATGTaGAATGTCAGTGATCTCATT +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFQFQVM*NVSDLI
Trigger: AATGAGATCACTGACATTCCACATGACTTGGAATTG...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR TCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATCACAACTGGTACACTaGTTCTACAAGTGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILSQLVH*FYKCLN
Trigger: GTTAAGACACTTGTAGAATCAGTGTACCAGTTGTGA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTATCTCTCACACACGTaGCCCCAATGTATATTTTTG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYYLSHT*PQCIFL
Trigger: CAAAAATATACATTGGGGGCACGTGTGTGAGAGATA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCTACCTTCCTCTCTCTaGAAGTTCTTGAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYLPSSL*KFLRCN
Trigger: ATTACATCTCAAGAACTTGCAGAGAGAGGAAGGTAG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCCTTTGATTTCCCACTaGAACTTGGTTTCAACTTAC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYPLISH*NLVSTY
Trigger: GTAAGTTGAAACCAAGTTGCAGTGGGAAATCAAAGG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATACCTATGTAAAAACCTaGCAACAGAATGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYTYVKT*QQNGKH
Trigger: GTGCTTTCCATTCTGTTGCCAGGTTTTTACATAGGT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGGTTAGAACTAGCATaGCATAAAGAGATTACATAC +
Preference number: 4 (lower is better)
Translates to: NCTLMMQVGVILGQISLFWLELA*HKEITY
Trigger: GTATGTAATCTCTTTATGCCATGCTAGTTCTAACCA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTTCAAAAGAAGGGACTaGTTAGAACTAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYFKRRD*LELAWH
Trigger: ATGCCATGCTAGTTCTAACCAGTCCCTTCTTTTGAA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTTTCCCACTGCAACTTaGTTTCAACTTACACTTCAG +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYFPTAT*FQLTLQ
Trigger: CTGAAGTGTAAGTTGAAACCAAGTTGCAGTGGGAAA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGAGAAAATAATCCTTTaGTGTCTAAGCTATGTGACG +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILEKIIL*CLSYVT
Trigger: CGTCACATAGCTTAGACAGCAAAGGATTATTTTCTC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAACTTTTGTCTGTGTGTaGATAAGAGCTTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILTFVCV*IRALKA
Trigger: TGCCTTTAAAGCTCTTATGCACACACAGACAAAAGT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACTTAATGATGCAGGTTaGAGTCATTTTAGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILLNDAG*SHFRAN
Trigger: ATTTGCCCTAAAATGACTCCAACCTGCATCATTAAG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
3UTR CAA 72 bp TTACACTTCAGTACTCTAGTTGTTAGTACCATACAATaGCCAAGAGGCTTTTTGTTAAAGGCTACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LHFSTLVVSTIQ*PRGFLLKATSD
Trigger: ATCAGAAGTAGCCTTTAACAAAAAGCCTCTTGGCAATTGTATGGTACTAACAACTAGAGTACTGAAGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAGTTTTCTAGAGAGCTaGAGCAAAGTTAATACAGAA +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILSFLES*SKVNTE
Trigger: TTCTGTATTAACTTTGCTGCAGCTCTCTAGAAAACT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR GCA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAATCATTACATACAACTaGCACTGCAGTGACAATATT +
Preference number: 4 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILIITYN*HCSDNI
Trigger: AATATTGTCACTGCAGTGGCAGTTGTATGTAATGAT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CCA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTGGTTAGAACTAGCATaGCATAAAGAGATTACATAC +
Preference number: 4 (lower is better)
Translates to: FPQGIPETYSILYSEKNYWLELA*HKEITY
Trigger: GTATGTAATCTCTTTATGCCATGCTAGTTCTAACCA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 90 bp CTCTGGCGTGGATGGGCTCCGGATGTGAGAGGCCTCCACTGGCAGTaGGACGCTGGCGGGCATGCTGAGGTTCCCTTGGGGGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: LWRGWAPDVRGLHWQ*DAGGHAEVPLGDCR
Trigger: CCTGCAGTCCCCCAAGGGAACCTCAGCATGCCCGCCAGCGTCTCACTGCCAGTGGAGGCCTCTCACATCCGGAGCCCATCCACGCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 90 bp CCCCCTGTTCCCTCGGCTGGGCTGACAGATCAGAGTGAGAGGCGCTaGCAATGGACTAGGAAGCTCGGCTGCCGCTGCTACTGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: PPVPSAGLTDQSERR*QWTRKLGCRCYCSP
Trigger: GGGGGAGCAGTAGCAGCGGCAGCCGAGCTTCCTAGTCCATTGCCAGCGCCTCTCACTCTGATCTGTCAGCCCAGCCGAGGGAACAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000414320.1
ENST00000636453.2
ENST00000637545.1
CDS CCA 90 bp GCACACTGGAGCTGCTGGGGGTCACGGTGGCGAAGGCAGGCTGTGTaGTCTCTGAGTTCGAAGTGGTGGGTGGCGTGGATAGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: AHWSCWGSRWRRQAV*SLSSKWWVAWIGKW
Trigger: CCACTTCCCTATCCACGCCACCCACCACTTCGAACTCAGAGACCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCAGCTCCAGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 90 bp TGGAGAGAAGGCTGTGGCTTTCATGAGGATCCGGTCAGTCCTGGGTaGGTCCACAGTGGGAGCCCTACTGGATGGCAGGAGGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: WREGCGFHEDPVSPG*VHSGSPTGWQEGQR
Trigger: CCTCTGCCCCTCCTGCCATCCAGTAGGGCTCCCACTGTGGACCCACCCAGGACTGACCGGATCCTCATGAAAGCCACAGCCTTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp TCTGTGGTAACCCCGGAAGCACACTGGAGCTGCTGGGGGTCACGGTaGCGAAGGCAGGCTGTGTGGTCTCTGAGTTCGAAGTGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: SVVTPEAHWSCWGSR*RRQAVWSLSSKWWV
Trigger: CACCCACCACTTCGAACTCAGAGACCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCAGCTCCAGTGTGCTTCCGGGGTTACCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 90 bp TGCACTCTGGCTGATCAGAGTGGCAGAAGTAAGGCCAACGTTGGCTaGGGCAGAGAACTGCCCCTGGATCTGCCCTGCCAGGGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: CTLADQSGRSKANVG*GRELPLDLPCQGCR
Trigger: CCTACACCCCTGGCAGGGCAGATCCAGGGGCAGTTCTCTGCCCCAGCCAACGTTGGCCTTACTTCTGCCACTCTGATCAGCCAGAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 90 bp ACAGTGGGAGCCCTACTGGATGGCAGGAGGGGCAGAGGCCTCTTGTaGGACAACTGCCGTGCTTGTGCTATAGTGTGTGTGGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: TVGALLDGRRGRGLL*DNCRACAIVCVVGA
Trigger: GGCACCCACCACACACACTATAGCACAAGCACGGCAGTTGTCTCACAAGAGGCCTCTGCCCCTCCTGCCATCCAGTAGGGCTCCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 90 bp TGGGAGAGGTGGAGGCCATTAGTTCAGCAGAAGGCCCCATGCCACTaGAGCTGGTCTGTGGTAACCCCGGAAGCACACTGGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: WERWRPLVQQKAPCH*SWSVVTPEAHWSCW
Trigger: CCAGCAGCTCCAGTGTGCTTCCGGGGTTACCACAGACCAGCTTCAGTGGCATGGGGCCTTCTGCTGAACTAATGGCCTCCACCTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp ATCAGAGTGGCAGAAGTAAGGCCAACGTTGGCTGGGGCAGAGAACTaGCCCTGGATCTGCCCTGCCAGGGGTGTAGGTGGGTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: IRVAEVRPTLAGAEN*PWICPARGVGGFDK
Trigger: CTTGTCAAACCCACCTACACCCCTGGCAGGGCAGATCCAGGGGCAGTTCTCTGCCCCAGCCAACGTTGGCCTTACTTCTGCCACTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 90 bp CCTCTGGGAGGCATGGCTGCCGTCATGAAGTCCATGAAACTGTCCTaGGAAGGCTCTCTCCCCAAGTGCACTCTGGCTGATCAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: PLGGMAAVMKSMKLS*EGSLPKCTLADQSG
Trigger: GCCACTCTGATCAGCCAGAGTGCACTTGGGGAGAGAGCCTTCCCAGGACAGTTTCATGGACTTCATGACGGCAGCCATGCCTCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGGGTTGGTGCAGCGTaGGCTGTTATACTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGGVGAA*AVILGH
Trigger: GTGGCCAAGTATAACAGCCAACGCTGCACCAACCCC...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAGGTGGAATGGGTTTTaGGGGTCGACGAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGRWNGF*GSTRST
Trigger: CGTGGACCTCGTCGACCCCAAAAACCCATTCCACCT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp GCAAGGACCCCAATGGTACTCAGGCACTCGAGAGAAGTTACAGCCTaGAAGGCCCGTTCAAGCTCCTCAGCCTCTTCGGTAGTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ARTPMVLRHSREVTA*KARSSSSASSVVGR
Trigger: CCTCCCAACTACCGAAGAGGCTGAGGAGCTTGAACGGGCCTTGCAGGCTGTAACTTCTCTCGAGTGCCTGAGTACCATTGGGGTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 90 bp TCACGGTGGCGAAGGCAGGCTGTGTGGTCTCTGAGTTCGAAGTGGTaGGTGGCGTGGATAGGGAAGTGGAAAGAAGATGTCCATCTGCGC +
Preference number: 5 (lower is better)
Translates to: SRWRRQAVWSLSSKW*VAWIGKWKEDVHLR
Trigger: GCGCAGATGGACATCTTCTTTCCACTTCCCTATCCACGCCACCCACCACTTCGAACTCAGAGACCACACAGCCTGCCTTCGCCACCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 90 bp GGGTCACGGTGGCGAAGGCAGGCTGTGTGGTCTCTGAGTTCGAAGTaGTGGGTGGCGTGGATAGGGAAGTGGAAAGAAGATGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: GSRWRRQAVWSLSSK*WVAWIGKWKEDVHL
Trigger: CAGATGGACATCTTCTTTCCACTTCCCTATCCACGCCACCCACCACTTCGAACTCAGAGACCACACAGCCTGCCTTCGCCACCGTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 90 bp GTCGGCTTATACATGAGAAGTGTGGAGAGAAGGCTGTGGCTTTCATaGGGATCCGGTCAGTCCTGGGTGGGTCCACAGTGGGAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: VGLYMRSVERRLWLS*GSGQSWVGPQWEPY
Trigger: GTAGGGCTCCCACTGTGGACCCACCCAGGACTGACCGGATCCTCATGAAAGCCACAGCCTTCTCTCCACACTTCTCATGTATAAGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 90 bp AAGGGCTTTGTTAGCGCACTGTTCACCCTTCACGGTTCCACTGCATaGTGCTGGTTCCACCTCCCTCAGCTTGGTCCGGCTTATGCTGGT +
Preference number: 5 (lower is better)
Translates to: KGFVSALFTLHGSTA*CWFHLPQLGPAYAG
Trigger: ACCAGCATAAGCCGGACCAAGCTGAGGGAGGTGGAACCAGCAGCATGCAGTGGAACCGTGAAGGGTGAACAGTGCGCTAACAAAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp TTCCAATTCGGTTTCCAGGTAGTGGAGAGGGACCCTTGCCCCAGGTaGAGAGAGGGACATTCCATCCAGTCCGTTGGGCATCTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: FQFGFQVVERDPCPR*REGHSIQSVGHLQG
Trigger: GCCTTGAAGATGCCCAACGGACTGGATGGAATGTCCCTCTCTCCACCTGGGGCAAGGGTCCCTCTCCACTACCTGGAAACCGAATTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp CGAAGGCAGGCTGTGTGGTCTCTGAGTTCGAAGTGGTGGGTGGCGTaGATAGGGAAGTGGAAAGAAGATGTCCATCTGCGCCGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: RRQAVWSLSSKWWVA*IGKWKEDVHLRREG
Trigger: ACCTTCTCGGCGCAGATGGACATCTTCTTTCCACTTCCCTATCCACGCCACCCACCACTTCGAACTCAGAGACCACACAGCCTGCCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGATGCCGGCATTTCTTTaGACGAGATTCTGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGMPAFL*TRFCPL
Trigger: GAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCAT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp AAATGGGTCTTCCAATTCGGTTTCCAGGTAGTGGAGAGGGACCCTTaGCCCAGGTGGAGAGAGGGACATTCCATCCAGTCCGTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: KWVFQFGFQVVERDP*PRWREGHSIQSVGH
Trigger: ATGCCCAACGGACTGGATGGAATGTCCCTCTCTCCACCTGGGGCAAGGGTCCCTCTCCACTACCTGGAAACCGAATTGGAAGACCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 90 bp GAAGTAGATAAAGGTGACAGGTGGGAGTGCTGCTGCGGAGGCTGCTaGTGTGAAGGTGCAGGAGGGGGACTAAAGTGCTCTTGTCGAACT +
Preference number: 5 (lower is better)
Translates to: EVDKGDRWECCCGGC*CEGAGGGLKCSCRT
Trigger: AGTTCGACAAGAGCACTTTAGTCCCCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTTATCTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 90 bp CCACTACAGGCACTGCGAGGACATAACACCAGAGAGCTGCTCCTCTaGCCTCCGAAACGACAACTTTCCTACCATCTTGGAGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: PLQALRGHNTRELLL*PPKRQLSYHLGGRA
Trigger: TGCTCTGCCTCCAAGATGGTAGGAAAGTTGTCGTTTCGGAGGGCAGAGGAGCAGCTCTCTGGTGTTATGTCCTCGCAGTGCCTGTAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414320.1
ENST00000637545.1
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTCCACCTCCCTCAGCTaGGTCCGGCTTATGCTGGTT +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPASTSLS*VRLMLV
Trigger: AACCAGCATAAGCCGGACCAAGCTGAGGGAGGTGGA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp AAAGAAGTAGATAAAGGTGACAGGTGGGAGTGCTGCTGCGGAGGCTaGTGCTGTGAAGGTGCAGGAGGGGGACTAAAGTGCTCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: KEVDKGDRWECCCGG*CCEGAGGGLKCSCR
Trigger: TCGACAAGAGCACTTTAGTCCCCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTTATCTACTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 90 bp GCTGGAGGTTTTAAAGAAGTAGATAAAGGTGACAGGTGGGAGTGCTaGTGCGGAGGCTGCTGCTGTGAAGGTGCAGGAGGGGGACTAAAG +
Preference number: 5 (lower is better)
Translates to: AGGFKEVDKGDRWEC*CGGCCCEGAGGGLK
Trigger: CTTTAGTCCCCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTTATCTACTTCTTTAAAACCTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 90 bp GTCATGAAGTCCATGAAACTGTCCTGGGAAGGCTCTCTCCCCAAGTaGACTCTGGCTGATCAGAGTGGCAGAAGTAAGGCCAACGTTGGC +
Preference number: 5 (lower is better)
Translates to: VMKSMKLSWEGSLPK*TLADQSGRSKANVG
Trigger: GCCAACGTTGGCCTTACTTCTGCCACTCTGATCAGCCAGAGTGCACTTGGGGAGAGAGCCTTCCCAGGACAGTTTCATGGACTTCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp TTTACCACGCCTCCAAGTGGCACCTCAAGTTGGGTTGGGAGCAAGTaGTGCGCCATGATGGGCATCTCTGCTGAAAAGGTAGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: FTTPPSGTSSWVGSK*CAMMGISAEKVAAI
Trigger: TATGGCAGCTACCTTTTCAGCAGAGATGCCCATCATGGCGCAGCACTTGCTCCCAACCCAACTTGAGGTGCCACTTGGAGGCGTGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp CTACAGCACCACTACAGGCACTGCGAGGACATAACACCAGAGAGCTaGTCCTCTGCCCTCCGAAACGACAACTTTCCTACCATCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LQHHYRHCEDITPES*SSALRNDNFPTILE
Trigger: CTCCAAGATGGTAGGAAAGTTGTCGTTTCGGAGGGCAGAGGAGCAGCTCTCTGGTGTTATGTCCTCGCAGTGCCTGTAGTGGTGCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414320.1
ENST00000637545.1
CDS CCA 90 bp CCAGTACCTGTGGAGAACACCCCTATTCCTCTATCTGACAACTCCTaGACTGGCACACCATCTGACTGGGCAAGGACCCCAATGGTACTC +
Preference number: 5 (lower is better)
Translates to: PVPVENTPIPLSDNS*TGTPSDWARTPMVL
Trigger: GAGTACCATTGGGGTCCTTGCCCAGTCAGATGGTGTGCCAGTCCAGGAGTTGTCAGATAGAGGAATAGGGGTGTTCTCCACAGGTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCTTGAAGGGGGCAGTCTaGTCCTCCAGAACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPALKGAV*SSRTCL
Trigger: CAGACACGTTCTGGAGGACAAGACTGCCCCCTTCAA...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCTACGATCCTCTGATTaGGGGATGGGGTTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPALRSSD*GMGLVQ
Trigger: CTGCACCAACCCCATCCCCAAATCAGAGGATCGTAG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCATTAGGTCATCTGCCTaGCTCAGCAGCTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPAIRSSA*LSSWAG
Trigger: TCCTGCCCAGCTGCTGAGCAAGGCAGATGACCTAAT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCCTGCCACACACCATTaGCTGTCTCTTATACAGGAA +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGPATHH*LSLIQE
Trigger: TTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAGG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 90 bp GCCGCCTGCAGCAAAGCTTTCCTAAACGTATGCCGGCATTTCTTTTaGCGAGATTCTGCCCGCTCCAGGCGGCAGAGGTGCTTATATTTC +
Preference number: 5 (lower is better)
Translates to: AACSKAFLNVCRHFF*RDSARSRRQRCLYF
Trigger: GAAATATAAGCACCTCTGCCGCCTGGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCATACGTTTAGGAAAGCTTTGCTGCAGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp GGAAGTGGAAAGAAGATGTCCATCTGCGCCGAGAAGGTTGCTAAATaGAGAGGGGTCTCCAAGGTTGACAGGGAGATTGCCCCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: GSGKKMSICAEKVAK*RGVSKVDREIAPVS
Trigger: ACTCACTGGGGCAATCTCCCTGTCAACCTTGGAGACCCCTCTCCATTTAGCAACCTTCTCGGCGCAGATGGACATCTTCTTTCCACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGACCTGCAAGTGGCTGTaGCAGTACCTACGATCCTCT +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKTCKWL*QYLRSS
Trigger: AGAGGATCGTAGGTACTGCAACAGCCACTTGCAGGT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCCATGCTGAGGTTCCCTaGGGGGACTGCAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCHAEVP*GDCRWN
Trigger: ATTCCACCTGCAGTCCCCCAAGGGAACCTCAGCATG...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGTTTAGCAGAAAAAGGTaGTGCTACTCACACGACCAG +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGFSRKR*CYSHDQ
Trigger: CTGGTCGTGTGAGTAGCACAACCTTTTTCTGCTAAA...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGAAGGTGTTCTACATTTaGAGGCCCCAGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGKVFYI*RPQDIL
Trigger: AAGGATATCCTGGGGCCTCAAAATGTAGAACACCTT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp CCCGCTCCAGGCGGCAGAGGTGCTTATATTTCTGCTGAAAGTAAGTaGAAAGTTGAGTCACCCTGGAGCTCCTACTCTCCGCATCATCAT +
Preference number: 5 (lower is better)
Translates to: PAPGGRGAYISAESK*KVESPWSSYSPHHH
Trigger: ATGATGATGCGGAGAGTAGGAGCTCCAGGGTGACTCAACTTTGCACTTACTTTCAGCAGAAATATAAGCACCTCTGCCGCCTGGAGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp CCTATTCCTCTATCTGACAACTCCTGGACTGGCACACCATCTGACTaGGCAAGGACCCCAATGGTACTCAGGCACTCGAGAGAAGTTACA +
Preference number: 5 (lower is better)
Translates to: PIPLSDNSWTGTPSD*ARTPMVLRHSREVT
Trigger: TGTAACTTCTCTCGAGTGCCTGAGTACCATTGGGGTCCTTGCCCAGTCAGATGGTGTGCCAGTCCAGGAGTTGTCAGATAGAGGAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTGAGTCGCCTCTGCTaGCACAGTTTGGGGCTATAT +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKLSRLC*HSLGLY
Trigger: ATATAGCCCCAAACTGTGCAAGCAGAGGCGACTCAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCGATTCTGGGCCAACTaGCTCTGCAACTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPARFWAN*LCNFFL
Trigger: GAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATCG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCAGACAACTGCCGTGCTaGTGCTATAGTGTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPARQLPC*CYSVCG
Trigger: ACCACACACACTATAGCACAAGCACGGCAGTTGTCT...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCATTAGGTCATCTGCCTaGCTCAGCAGCTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCIRSSA*LSSWAG
Trigger: TCCTGCCCAGCTGCTGAGCAAGGCAGATGACCTAAT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTCTGCGCCGAGAAGGTaGCTAAATGGAGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSAPRR*LNGEGS
Trigger: AGACCCCTCTCCATTTAGCAACCTTCTCGGCGCAGA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 90 bp TTTCTGGGTGCACAGTTTCACCAGTCTCTGCAGTCGGCTTATACATaGGAAGTGTGGAGAGAAGGCTGTGGCTTTCATGAGGATCCGGTC +
Preference number: 5 (lower is better)
Translates to: FLGAQFHQSLQSAYT*EVWREGCGFHEDPV
Trigger: GACCGGATCCTCATGAAAGCCACAGCCTTCTCTCCACACTTCTCATGTATAAGCCGACTGCAGAGACTGGTGAAACTGTGCACCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 90 bp ATGCTGGTTCGACTGCATGCAGCTCTCCGCAGTTCTTGTATTAACTaGCCAGTGCATTCTGGTTCTTTACTGGCCGCCTGCAGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: MLVRLHAALRSSCIN*PVHSGSLLAACSKA
Trigger: AGCTTTGCTGCAGGCGGCCAGTAAAGAACCAGAATGCACTGGTCAGTTAATACAAGAACTGCGGAGAGCTGCATGCAGTCGAACCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGACATATTCACATTGCTaGAAGGGGGCAGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKTYSHC*KGAVLS
Trigger: GGACAAGACTGCCCCCTTCAAGCAATGTGAATATGT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGATGTCAGTGATCTCATaGGCAATGTCATCCGGCAAC +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKMSVIS*AMSSGN
Trigger: GTTGCCGGATGACATTGCCAATGAGATCACTGACAT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCTCTGCGCCGAGAAGGTaGCTAAATGGAGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCSAPRR*LNGEGS
Trigger: AGACCCCTCTCCATTTAGCAACCTTCTCGGCGCAGA...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGCATATACTCATCTTTTaGCAATACCAACCCATAGCG +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGHILIF*QYQPIA
Trigger: CGCTATGGGTTGGTATTGCAAAAAGATGAGTATATG...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTTCCAAGGGGAACTTaGGGTGCATACAGAGCTTAC +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKFPRGT*GAYRAY
Trigger: GTAAGCTCTGTATGCACCCAAAGTTCCCCTTGGAAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCCCAGCAATGCCGCACCCAATGCCACAAGTATGCCTGTCCACCAGAACTGGGATACCAACTCTACTTTaGACTATTTCAGACCACCAG +
Preference number: 5 (lower is better)
Translates to: LPAMPHPMPQVCLSTRTGIPTLL*TISDHQ
Trigger: CTGGTGGTCTGAAATAGTCAAAAGTAGAGTTGGTAT...CCCAGTTCTGGTGGACAGGCATACTTGTGGCATTGGGTGCGGCATTGCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp GCCAACGTGGGCACTGTCAGGCTAAAGGCCATGGTATCCATCTGGTaGCTGACCTTCACCTCATCTATAGGATCATTCTTTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ANVGTVRLKAMVSIW*LTFTSSIGSFFFFL
Trigger: GAGGAAGAAAAAGAATGATCCTATAGATGAGGTGAAGGTCAGGCACCAGATGGATACCATGGCCTTTAGCCTGACAGTGCCCACGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 90 bp GCAAACACACAGACACCCTCAGTTAGGGGAGGGAAAGGGAGAAGATaGATTATTGGTACTTGTAGCTGTGGCACCTGTTACTGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ANTQTPSVRGGKGRR*IIGTCSCGTCYCEA
Trigger: GGCTTCACAGTAACAGGTGCCACAGCTACAAGTACCAATAATGCATCTTCTCCCTTTCCCTCCCCTAACTGAGGGTGTCTGTGTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 90 bp AGTGGCTGTTGCAGTACCTACGATCCTCTGATTTGGGGATGGGGTTaGTGCAGCGTTGGCTGTTATACTTGGCCACATATTCACATTGCT +
Preference number: 5 (lower is better)
Translates to: SGCCSTYDPLIWGWG*CSVGCYTWPHIHIA
Trigger: AGCAATGTGAATATGTGGCCAAGTATAACAGCCAACGCTGCACCAACCCCATCCCCAAATCAGAGGATCGTAGGTACTGCAACAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCCGTTGGCTGTTATACTaGGCCACATATTCACATTGC +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPARWLLY*ATYSHC
Trigger: GCAATGTGAATATGTGGCCAAGTATAACAGCCAACG...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAGACAACTGCCGTGCTaGTGCTATAGTGTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCRQLPC*CYSVCG
Trigger: ACCACACACACTATAGCACAAGCACGGCAGTTGTCT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGTGAATGGAAGGGCTTaGTTAGCGCACTGTTCACCC +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCVNGRA*LAHCSP
Trigger: GGGTGAACAGTGCGCTAACAAAGCCCTTCCATTCAC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCACTTGGCTGTGCAACTaGAGAAGAGCTGCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCTWLCN*RRAAES
Trigger: ACTCTCAGCAGCTCTTCTCAAGTTGCACAGCCAAGT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGGAGAAGATGCATTATaGGTACTTGTAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKGEDAL*VLVAVA
Trigger: TGCCACAGCTACAAGTACCAATAATGCATCTTCTCC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 90 bp GGCGTAGCCGTTGAGTCGCCTCTGCTTGCACAGTTTGGGGCTATATaGGCACAAGGGCTTATTGTCAACCTCAGAGAAGTGTATATGTTT +
Preference number: 5 (lower is better)
Translates to: GVAVESPLLAQFGAI*AQGLIVNLREVYMF
Trigger: AAACATATACACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGAGGCGACTCAACGGCTACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000414320.1
ENST00000636453.2
ENST00000637545.1
CDS TCA 90 bp TCAGACCAGTCCAAACCTAAATGGGGAAACAGATCAGTGTCCAACTaGTGTTTCTGGGTGCACAGTTTCACCAGTCTCTGCAGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: SDQSKPKWGNRSVSN*CFWVHSFTSLCSRL
Trigger: AAGCCGACTGCAGAGACTGGTGAAACTGTGCACCCAGAAACATCAGTTGGACACTGATCTGTTTCCCCATTTAGGTTTGGACTGGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 90 bp TGGCACAGAGCACTGCTGTCCATCTGCAAACTTGGCTGTGCAACTTaGGAAGAGCTGCTGAGAGTGGTTCAAGAGGATATGTTGGAAACA +
Preference number: 5 (lower is better)
Translates to: WHRALLSICKLGCAT*EELLRVVQEDMLET
Trigger: TGTTTCCAACATATCCTCTTGAACCACTCTCAGCAGCTCTTCTCAAGTTGCACAGCCAAGTTTGCAGATGGACAGCAGTGCTCTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp AAGGCCAACGTGGGCACTGTCAGGCTAAAGGCCATGGTATCCATCTaGTGCCTGACCTTCACCTCATCTATAGGATCATTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KANVGTVRLKAMVSI*CLTFTSSIGSFFFF
Trigger: GAAGAAAAAGAATGATCCTATAGATGAGGTGAAGGTCAGGCACCAGATGGATACCATGGCCTTTAGCCTGACAGTGCCCACGTTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCTCTGCTTGCACAGTTaGGGGCTATATGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCLCLHS*GLYEHK
Trigger: CTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGAG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCGGCCACATATTCACATaGCTTGAAGGGGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCGHIFT*LEGGSL
Trigger: AAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCC...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGGGGTTGGTGCAGCGTaGGCTGTTATACTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIGVGAA*AVILGH
Trigger: GTGGCCAAGTATAACAGCCAACGCTGCACCAACCCC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGACTTCTTTCTCACAGTaGCCCCTTTCTTTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKTSFSQ*PLSLGH
Trigger: ATGACCTAAAGAAAGGGGCAACTGTGAGAAAGAAGT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTGTGCCACTCCCTGCATaGGTAGGCTGGTGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIVPLPA*VGWCSE
Trigger: CTCAGAACACCAGCCTACCAATGCAGGGAGTGGCAC...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTCCACCTCCCTCAGCTaGGTCCGGCTTATGCTGGTT +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVSTSLS*VRLMLV
Trigger: AACCAGCATAAGCCGGACCAAGCTGAGGGAGGTGGA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGTTCTTCTTGTGTTTTTaGGTTAGTGCAGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKFFLCF*VSAGGL
Trigger: CAAGCCTCCTGCACTAACCAAAAAACACAAGAAGAA...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAGATGGATCAAGGAGTaGACAGATCCCATCTTTTCA +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKRWIKE*TDPIFS
Trigger: TGAAAAGATGGGATCTGTCAACTCCTTGATCCATCT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AATGCCACAAGTATGCCTGTCCACCAGAACTGGGGGCTCTTACCAAAACCTGCCGACTGTGATCACAGATaGAGAACAAGCTCTGATAAG +
Preference number: 5 (lower is better)
Translates to: NATSMPVHQNWGLLPKPADCDHR*RTSSDK
Trigger: CTTATCAGAGCTTGTTCTCAATCTGTGATCACAGTC...GGCAGGTTTTGGTAAGAGCCCCCAGTTCTGGTGGACAGGCATACTTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp CAAAGCTTTCCTAAACGTATGCCGGCATTTCTTTTGACGAGATTCTaGCCGCTCCAGGCGGCAGAGGTGCTTATATTTCTGCTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: QSFPKRMPAFLLTRF*PLQAAEVLIFLLKV
Trigger: TACTTTCAGCAGAAATATAAGCACCTCTGCCGCCTGGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCATACGTTTAGGAAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp GGACTAAAGTGCTCTTGTCGAACTTTTAAAATCTCTGTCTCTCTCTaGCGCTGCCGATTCTGGGCCAACTTGCTCTGCAACTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: GLKCSCRTFKISVSL*RCRFWANLLCNFFL
Trigger: GAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATCGGCAGCGCCAGAGAGAGACAGAGATTTTAAAAGTTCGACAAGAGCACTTTAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp CTGAGAGTGGTTCAAGAGGATATGTTGGAAACAATGTCTGGTGAATaGAAGGGCTTTGTTAGCGCACTGTTCACCCTTCACGGTTCCACT +
Preference number: 5 (lower is better)
Translates to: LRVVQEDMLETMSGE*KGFVSALFTLHGST
Trigger: AGTGGAACCGTGAAGGGTGAACAGTGCGCTAACAAAGCCCTTCCATTCACCAGACATTGTTTCCAACATATCCTCTTGAACCACTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp GGCATGTTCTTCACACAGAGGTGTCTGATGTGTAATGTCAAAAACTaGCACAGAGCACTGCTGTCCATCTGCAAACTTGGCTGTGCAACT +
Preference number: 5 (lower is better)
Translates to: GMFFTQRCLMCNVKN*HRALLSICKLGCAT
Trigger: AGTTGCACAGCCAAGTTTGCAGATGGACAGCAGTGCTCTGTGCCAGTTTTTGACATTACACATCAGACACCTCTGTGTGAAGAACATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCATGTCAGTGATCTCATaGGCAATGTCATCCGGCAAC +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCMSVIS*AMSSGN
Trigger: GTTGCCGGATGACATTGCCAATGAGATCACTGACAT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCCCTGCCACACACCATTaGCTGTCTCTTATACAGGAA +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCPATHH*LSLIQE
Trigger: TTCCTGTATAAGAGACAGCAAATGGTGTGTGGCAGG...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCTGGAGGAGAGGAGATaGCCTTACACGTGCACTGCT +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRILEERR*PYTCTA
Trigger: AGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCAG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGAGCCCCTTCCAAAAATaGTTTATGAAAGGCCTATAC +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKSPFQK*FMKGLY
Trigger: GTATAGGCCTTTCATAAACAATTTTTGGAAGGGGCT...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCTCTCTCTGCAAGTTCTaGAGATGTAATCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCSLCKF*RCNLLP
Trigger: TGGCAGCAGATTACATCTCAAGAACTTGCAGAGAGA...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGCCCATCTCCTCATCTaGCTCCTACAGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVAHLLI*LLQSVQ
Trigger: CTGCACAGACTGTAGGAGCAAGATGAGGAGATGGGC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 90 bp CTGAAAAGTCCTCCTGGTTCAATTCCAAGTCATGTGGAATGTCAGTaGTCTCATTGGCAATGTCATCCGGCAACTCATCAGCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: LKSPPGSIPSHVECQ*SHWQCHPATHQHSA
Trigger: AGCTGAGTGCTGATGAGTTGCCGGATGACATTGCCAATGAGATCACTGACATTCCACATGACTTGGAATTGAACCAGGAGGACTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp AAGTGCTCTTGTCGAACTTTTAAAATCTCTGTCTCTCTCTGGCGCTaGCGATTCTGGGCCAACTTGCTCTGCAACTTCTTTCTCACAGTT +
Preference number: 5 (lower is better)
Translates to: KCSCRTFKISVSLWR*RFWANLLCNFFLTV
Trigger: AACTGTGAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATCGGCAGCGCCAGAGAGAGACAGAGATTTTAAAAGTTCGACAAGAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp TGTAAGTCATCAGGTAGCCGTGGCAGGACATCTGAAAAGTCCTCCTaGTTCAATTCCAAGTCATGTGGAATGTCAGTGATCTCATTGGCA +
Preference number: 5 (lower is better)
Translates to: CKSSGSRGRTSEKSS*FNSKSCGMSVISLA
Trigger: TGCCAATGAGATCACTGACATTCCACATGACTTGGAATTGAACCAGGAGGACTTTTCAGATGTCCTGCCACGGCTACCTGATGACTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTACCTGCAAGTGGCTGTaGCAGTACCTACGATCCTCT +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRITCKWL*QYLRSS
Trigger: AGAGGATCGTAGGTACTGCAACAGCCACTTGCAGGT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCACTTCTTTCTCACAGTaGCCCCTTTCTTTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCTSFSQ*PLSLGH
Trigger: ATGACCTAAAGAAAGGGGCAACTGTGAGAAAGAAGT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGTGAATGGAAGGGCTTaGTTAGCGCACTGTTCACCC +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVVNGRA*LAHCSP
Trigger: GGGTGAACAGTGCGCTAACAAAGCCCTTCCATTCAC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GTACAGATCATATGTGCGTGTGCATTCTTCGGGACTGTGGTGGGCAGACGCAAGGTTAGTACCATACAATaGCCAAGAGGCTTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: VQIICACAFFGTVVGRRKVSTIQ*PRGFLL
Trigger: TAACAAAAAGCCTCTTGGCAATTGTATGGTACTAAC...CTTGCGTCTGCCCACCACAGTCCCGAAGAATGCACACGCACATATGATCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 90 bp AACCTAAATGGGGAAACAGATCAGTGTCCAACTGATGTTTCTGGGTaGACAGTTTCACCAGTCTCTGCAGTCGGCTTATACATGAGAAGT +
Preference number: 5 (lower is better)
Translates to: NLNGETDQCPTDVSG*TVSPVSAVGLYMRS
Trigger: ACTTCTCATGTATAAGCCGACTGCAGAGACTGGTGAAACTGTGCACCCAGAAACATCAGTTGGACACTGATCTGTTTCCCCATTTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 90 bp GGTGCTTATATTTCTGCTGAAAGTAAGTGCAAAGTTGAGTCACCCTaGAGCTCCTACTCTCCGCATCATCATCATCTGACGCATGTCTTT +
Preference number: 5 (lower is better)
Translates to: GAYISAESKCKVESP*SSYSPHHHHLTHVF
Trigger: AAAGACATGCGTCAGATGATGATGATGCGGAGAGTAGGAGCTCCAGGGTGACTCAACTTTGCACTTACTTTCAGCAGAAATATAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTCAAGGATACCACAGTTaGGAATGCCGCAGAATCAGG +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIQGYHS*ECRRIR
Trigger: CCTGATTCTGCGGCATTCCAAACTGTGGTATCCTTG...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTTGAGTCGCCTCTGCTaGCACAGTTTGGGGCTATAT +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVLSRLC*HSLGLY
Trigger: ATATAGCCCCAAACTGTGCAAGCAGAGGCGACTCAA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCAAAGTCATACCCAATTaGCTTGCTCTCTCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCKVIPN*LALSLK
Trigger: TTTCAGAGAGAGAGCAAGCAAATTGGGTATGACTTT...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTACATATTCACATTGCTaGAAGGGGGCAGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRITYSHC*KGAVLS
Trigger: GGACAAGACTGCCCCCTTCAAGCAATGTGAATATGT...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCATGCCGGCATTTCTTTaGACGAGATTCTGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: NCTLMMQVGVILGQISLFMPAFL*TRFCPL
Trigger: GAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCAT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTGTCCATCTGCAAACTaGGCTGTGCAACTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPICPSAN*AVQLEK
Trigger: CTTCTCAAGTTGCACAGCCAAGTTTGCAGATGGACA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGGTGGAATGGGTTTTaGGGGTCGACGAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYRWNGF*GSTRST
Trigger: CGTGGACCTCGTCGACCCCAAAAACCCATTCCACCT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACATGCTGAGGTTCCCTaGGGGGACTGCAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILHAEVP*GDCRWN
Trigger: ATTCCACCTGCAGTCCCCCAAGGGAACCTCAGCATG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCACCTCACTTTCCAACTaGCTCCCCATGCCTACTATT +
Preference number: 5 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPITSLSN*LPMPTI
Trigger: AATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGGT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGACCTCACTTTCCAACTaGCTCCCCATGCCTACTATT +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVTSLSN*LPMPTI
Trigger: AATAGTAGGCATGGGGAGCAAGTTGGAAAGTGAGGT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCAGTAGGGGCAGCATTTaGCTAAATGTAAAAGATTGC +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCSRGSI*LNVKDC
Trigger: GCAATCTTTTACATTTAGCAAAATGCTGCCCCTACT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp GATCACAATTACGAATGGAATCCTGGCCTCACTGTGGTGTTTAGCAGTTGGTGCAATACAGAGGAGAGATaGTCAGTTTGTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: DHNYEWNPGLTVVFSSWCNTEER*SVCKFP
Trigger: AGGGAACTTACAAACTGACAATCTCTCCTCTGTATT...GCACCAACTGCTAAACACCACAGTGAGGCCAGGATTCCATTCGTAATTGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGGGCAAATCAGTCTATTCCCCCAGGTAGAACCAATGGTGTGGCATTTAGCTGCGTGAGCCATCTCTTCTaGTTTAAAGGGAAATTACAA +
Preference number: 5 (lower is better)
Translates to: RANQSIPPGRTNGVAFSCVSHLF*FKGKLQ
Trigger: TTGTAATTTCCCTTTAAACAAGAAGAGATGGCTCAC...GCAGCTAAATGCCACACCATTGGTTCTACCTGGGGGAATAGACTGATTTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTATTGAAGGGGGCAGTCTaGTCCTCCAGAACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILLKGAV*SSRTCL
Trigger: CAGACACGTTCTGGAGGACAAGACTGCCCCCTTCAA...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGGCCACATATTCACATaGCTTGAAGGGGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: NCTLMMQVGVILGQISLFGHIFT*LEGGSL
Trigger: AAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCCGTTGGCTGTTATACTaGGCCACATATTCACATTGC +
Preference number: 5 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIRWLLY*ATYSHC
Trigger: GCAATGTGAATATGTGGCCAAGTATAACAGCCAACG...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCACTTGGCTGTGCAACTaGAGAAGAGCTGCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: NCTLMMQVGVILGQISLFTWLCN*RRAAES
Trigger: ACTCTCAGCAGCTCTTCTCAAGTTGCACAGCCAAGT...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGGAGAAGATGCATTATaGGTACTTGTAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVGEDAL*VLVAVA
Trigger: TGCCACAGCTACAAGTACCAATAATGCATCTTCTCC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCTTTAGCAGAAAAAGGTaGTGCTACTCACACGACCAG +
Preference number: 5 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIFSRKR*CYSHDQ
Trigger: CTGGTCGTGTGAGTAGCACAACCTTTTTCTGCTAAA...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACTGGAGGAGAGGAGATaGCCTTACACGTGCACTGCT +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILLEERR*PYTCTA
Trigger: AGCAGTGCACGTGTAAGGCAATCTCCTCTCCTCCAG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGAGCACAAGGGCTTATaGTCAACCTCAGAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: NCTLMMQVGVILGQISLFEHKGL*STSEKC
Trigger: ACACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAATTCCATCCAGTCCGTaGGGCATCTTCAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILIPSSP*GIFKAN
Trigger: GTTGGCCTTGAAGATGCCCAACGGACTGGATGGAAT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATATTCCATCCAGTCCGTaGGGCATCTTCAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYIPSSP*GIFKAN
Trigger: GTTGGCCTTGAAGATGCCCAACGGACTGGATGGAAT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGTCATCATCTTCCTCATaGAAAGCAAATGGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVSSSSS*KANGSS
Trigger: GGAAGACCCATTTGCTTTCAATGAGGAAGATGATGA...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCTGTCCATCTGCAAACTaGGCTGTGCAACTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NCTLMMQVGVILGQISLFCPSAN*AVQLEK
Trigger: CTTCTCAAGTTGCACAGCCAAGTTTGCAGATGGACA...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTTCTTCTTGTGTTTTTaGGTTAGTGCAGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRIFFLCF*VSAGGL
Trigger: CAAGCCTCCTGCACTAACCAAAAAACACAAGAAGAA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCAAGGATACCACAGTTaGGAATGCCGCAGAATCAGG +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYQGYHS*ECRRIR
Trigger: CCTGATTCTGCGGCATTCCAAACTGTGGTATCCTTG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATCGATTCTGGGCCAACTaGCTCTGCAACTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYRFWAN*LCNFFL
Trigger: GAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATCG...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGTTCAAGAGGATATGTaGGAAACAATGTCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVVQEDM*ETMSGE
Trigger: TTCACCAGACATTGTTTCCAACATATCCTCTTGAAC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAAAGTCATACCCAATTaGCTTGCTCTCTCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIKVIPN*LALSLK
Trigger: TTTCAGAGAGAGAGCAAGCAAATTGGGTATGACTTT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGAAAGAACTATCACTGTaGAGAGGAACAGATTCAACC +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVKELSL*RGTDST
Trigger: GGTTGAATCTGTTCCTCTCAACAGTGATAGTTCTTT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGATACCAACTCTACTTTaGACTATTTCAGACCACCAG +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVIPTLL*TISDHQ
Trigger: CTGGTGGTCTGAAATAGTCAAAAGTAGAGTTGGTAT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCAGTAGGGGCAGCATTTaGCTAAATGTAAAAGATTGC +
Preference number: 5 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPISRGSI*LNVKDC
Trigger: GCAATCTTTTACATTTAGCAAAATGCTGCCCCTACT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp CTCTGTACAGATATACACATAAGGGTCTGTTTTCACCCTTCAACCGGGAGAATTTCTTACAATTTAGGATaGTCCATCTACCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LCTDIHIRVCFHPSTGRISYNLG*SIYLPL
Trigger: GAGAGGAAGGTAGATGGACAATCCTAAATTGTAAGA...AATTCTCCCGGTTGAAGGGTGAAAACAGACCCTTATGTGTATATCTGTACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTCAACCCTTCCAAACAGATGAAGACAATGTCAACAAGTGTCAGACTTCCCATCATTTCCCACTGCAACTaGGTTTCAACTTACACTTCA +
Preference number: 5 (lower is better)
Translates to: FNPSKQMKTMSTSVRLPIISHCN*VSTYTS
Trigger: TGAAGTGTAAGTTGAAACCAAGTTGCAGTGGGAAAT...GATGGGAAGTCTGACACTTGTTGACATTGTCTTCATCTGTTTGGAAGGGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGATTTCCCACTGCAACTaGGTTTCAACTTACACTTCA +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVISHCN*VSTYTS
Trigger: TGAAGTGTAAGTTGAAACCAAGTTGCAGTGGGAAAT...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGAGCACAAGGGCTTATaGTCAACCTCAGAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYEHKGL*STSEKC
Trigger: ACACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AGCACACATTCATATCTCTCACACACGTGCCCCCAATGTATATTTTTGCATGTGGTTAGTACCATACAATaGCCAAGAGGCTTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: STHSYLSHTCPQCIFLHVVSTIQ*PRGFLL
Trigger: TAACAAAAAGCCTCTTGGCAATTGTATGGTACTAAC...CACATGCAAAAATATACATTGGGGGCACGTGTGTGAGAGATATGAATGTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTACCCTATTCAGGAAACTaGAGGAAAAGAAGGACCAAC +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILPYSGN*RKRRTN
Trigger: GTTGGTCCTTCTTTTCCTCAAGTTTCCTGAATAGGG...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAAGGTGTTCTACATTTaGAGGCCCCAGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYKVFYI*RPQDIL
Trigger: AAGGATATCCTGGGGCCTCAAAATGTAGAACACCTT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATTCATCATCTTCCTCATaGAAAGCAAATGGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSSSSS*KANGSS
Trigger: GGAAGACCCATTTGCTTTCAATGAGGAAGATGATGA...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAGACTGTGATCACAGATaGAGAACAAGCTCTGATAAG +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILDCDHR*RTSSDK
Trigger: CTTATCAGAGCTTGTTCTCAATCTGTGATCACAGTC...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AACTGTACCTTAATGATGCAGGTTGGAGTCATTTTAGGGCAAATCAGTCTATTCGTGAGCCATCTCTTCTaGTTTAAAGGGAAATTACAA +
Preference number: 5 (lower is better)
Translates to: NCTLMMQVGVILGQISLFVSHLF*FKGKLQ
Trigger: TTGTAATTTCCCTTTAAACAAGAAGAGATGGCTCAC...GAATAGACTGATTTGCCCTAAAATGACTCCAACCTGCATCATTAAGGTACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATGTTCAAGAGGATATGTaGGAAACAATGTCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYVQEDM*ETMSGE
Trigger: TTCACCAGACATTGTTTCCAACATATCCTCTTGAAC...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATACCCAGATGTGCAAATaGCTAAGCCATTTTTACAGA +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYTQMCK*LSHFYR
Trigger: TCTGTAAAAATGGCTTAGCAATTTGCACATCTGGGT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAAAGAACTATCACTGTaGAGAGGAACAGATTCAACC +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILKELSL*RGTDST
Trigger: GGTTGAATCTGTTCCTCTCAACAGTGATAGTTCTTT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp TTTCCACAAGGAATCCCTGAGACATACTCAATACTATACAGTGAAAAGAACTATAGCCCCTTCCAAAAATaGTTTATGAAAGGCCTATAC +
Preference number: 5 (lower is better)
Translates to: FPQGIPETYSILYSEKNYSPFQK*FMKGLY
Trigger: GTATAGGCCTTTCATAAACAATTTTTGGAAGGGGCT...ATAGTTCTTTTCACTGTATAGTATTGAGTATGTCTCAGGGATTCCTTGTGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS-3UTR CAA 90 bp AAAGTATCAGCTTTCTTTAGCCTCAAGCCACTAAAGACAGTAACACCAATTTTAAATACAGAGGAGAGATaGTCAGTTTGTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: KVSAFFSLKPLKTVTPILNTEER*SVCKFP
Trigger: AGGGAACTTACAAACTGACAATCTCTCCTCTGTATT...TAAAATTGGTGTTACTGTCTTTAGTGGCTTGAGGCTAAAGAAAGCTGATACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 72 bp GGATGGGCTCCGGATGTGAGAGGCCTCCACTGGCAGTaGGACGCTGGCGGGCATGCTGAGGTTCCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: GWAPDVRGLHWQ*DAGGHAEVPLG
Trigger: CCCCAAGGGAACCTCAGCATGCCCGCCAGCGTCTCACTGCCAGTGGAGGCCTCTCACATCCGGAGCCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp AGCTGGTCTGTGGTAACCCCGGAAGCACACTGGAGCTaGTGGGGGTCACGGTGGCGAAGGCAGGCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: SWSVVTPEAHWS*WGSRWRRQAVW
Trigger: CCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCAGCTCCAGTGTGCTTCCGGGGTTACCACAGACCAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp GCAGAAGTAAGGCCAACGTTGGCTGGGGCAGAGAACTaGCCCTGGATCTGCCCTGCCAGGGGTGTAGGTGGG +
Preference number: 6 (lower is better)
Translates to: AEVRPTLAGAEN*PWICPARGVGG
Trigger: CCCACCTACACCCCTGGCAGGGCAGATCCAGGGGCAGTTCTCTGCCCCAGCCAACGTTGGCCTTACTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp CCCTCGGCTGGGCTGACAGATCAGAGTGAGAGGCGCTaGCAATGGACTAGGAAGCTCGGCTGCCGCTGCTAC +
Preference number: 6 (lower is better)
Translates to: PSAGLTDQSERR*QWTRKLGCRCY
Trigger: GTAGCAGCGGCAGCCGAGCTTCCTAGTCCATTGCCAGCGCCTCTCACTCTGATCTGTCAGCCCAGCCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000414320.1
ENST00000636453.2
ENST00000637545.1
CDS CCA 72 bp TGGTCTGTGGTAACCCCGGAAGCACACTGGAGCTGCTaGGGGTCACGGTGGCGAAGGCAGGCTGTGTGGTCT +
Preference number: 6 (lower is better)
Translates to: WSVVTPEAHWSC*GSRWRRQAVWS
Trigger: AGACCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCAGCTCCAGTGTGCTTCCGGGGTTACCACAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp GCTGGGCTGACAGATCAGAGTGAGAGGCGCTGGCAATaGACTAGGAAGCTCGGCTGCCGCTGCTACTGCTCC +
Preference number: 6 (lower is better)
Translates to: AGLTDQSERRWQ*TRKLGCRCYCS
Trigger: GGAGCAGTAGCAGCGGCAGCCGAGCTTCCTAGTCCATTGCCAGCGCCTCTCACTCTGATCTGTCAGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000414320.1
ENST00000636453.2
ENST00000637545.1
CDS CCA 72 bp AGCTGCTGGGGGTCACGGTGGCGAAGGCAGGCTGTGTaGTCTCTGAGTTCGAAGTGGTGGGTGGCGTGGATA +
Preference number: 6 (lower is better)
Translates to: SCWGSRWRRQAV*SLSSKWWVAWI
Trigger: TATCCACGCCACCCACCACTTCGAACTCAGAGACCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CAA 90 bp GGGACCCTTGCCCCAGGTGGAGAGAGGGACATTCCATCCAGTCCGTaGGGCATCTTCAAGGCCAACGTGGGCACTGTCAGGCTAAAGGCC +
Preference number: 6 (lower is better)
Translates to: GTLAPGGERDIPSSP*GIFKANVGTVRLKA
Trigger: GGCCTTTAGCCTGACAGTGCCCACGTTGGCCTTGAAGATGCCCAACGGACTGGATGGAATGTCCCTCTCTCCACCTGGGGCAAGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp GGCAATGTCATCCGGCAACTCATCAGCACTCAGCTCTaGCGTGGATGGGCTCCGGATGTGAGAGGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: GNVIRQLISTQL*RGWAPDVRGLH
Trigger: GTGGAGGCCTCTCACATCCGGAGCCCATCCACGCCAGAGCTGAGTGCTGATGAGTTGCCGGATGACATTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp GCTGATCAGAGTGGCAGAAGTAAGGCCAACGTTGGCTaGGGCAGAGAACTGCCCCTGGATCTGCCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: ADQSGRSKANVG*GRELPLDLPCQ
Trigger: CTGGCAGGGCAGATCCAGGGGCAGTTCTCTGCCCCAGCCAACGTTGGCCTTACTTCTGCCACTCTGATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 72 bp CTGTGGCTGGGCTGCAGGTCCTTAGGAATGCCACTGTaGGAACTCAGCTGGTGGCCAAAGGCTGCGCTGAAC +
Preference number: 6 (lower is better)
Translates to: LWLGCRSLGMPL*ELSWWPKAALN
Trigger: GTTCAGCGCAGCCTTTGGCCACCAGCTGAGTTCTCACAGTGGCATTCCTAAGGACCTGCAGCCCAGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp AAAGGTGACAGGTGGGAGTGCTGCTGCGGAGGCTGCTaGTGTGAAGGTGCAGGAGGGGGACTAAAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: KGDRWECCCGGC*CEGAGGGLKCS
Trigger: AGAGCACTTTAGTCCCCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp GATAAAGGTGACAGGTGGGAGTGCTGCTGCGGAGGCTaGTGCTGTGAAGGTGCAGGAGGGGGACTAAAGTGC +
Preference number: 6 (lower is better)
Translates to: DKGDRWECCCGG*CCEGAGGGLKC
Trigger: GCACTTTAGTCCCCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp CAGGAGGGGCAGAGGCCTCTTGTGAGACAACTGCCGTaGTTGTGCTATAGTGTGTGTGGTGGGTGCCACTCC +
Preference number: 6 (lower is better)
Translates to: QEGQRPLVRQLP*LCYSVCGGCHS
Trigger: GGAGTGGCACCCACCACACACACTATAGCACAAGCACGGCAGTTGTCTCACAAGAGGCCTCTGCCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp GGTTTCCAGGTAGTGGAGAGGGACCCTTGCCCCAGGTaGAGAGAGGGACATTCCATCCAGTCCGTTGGGCAT +
Preference number: 6 (lower is better)
Translates to: GFQVVERDPCPR*REGHSIQSVGH
Trigger: ATGCCCAACGGACTGGATGGAATGTCCCTCTCTCCACCTGGGGCAAGGGTCCCTCTCCACTACCTGGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp CTGGGGTTTACCACGCCTCCAAGTGGCACCTCAAGTTaGGTTGGGAGCAAGTGCTGCGCCATGATGGGCATC +
Preference number: 6 (lower is better)
Translates to: LGFTTPPSGTSS*VGSKCCAMMGI
Trigger: GATGCCCATCATGGCGCAGCACTTGCTCCCAACCCAACTTGAGGTGCCACTTGGAGGCGTGGTAAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CAA 72 bp GAGGGGCAGAGGCCTCTTGTGAGACAACTGCCGTGCTaGTGCTATAGTGTGTGTGGTGGGTGCCACTCCCTG +
Preference number: 6 (lower is better)
Translates to: EGQRPLVRQLPC*CYSVCGGCHSL
Trigger: CAGGGAGTGGCACCCACCACACACACTATAGCACAAGCACGGCAGTTGTCTCACAAGAGGCCTCTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 72 bp GCCCTACTGGATGGCAGGAGGGGCAGAGGCCTCTTGTaGGACAACTGCCGTGCTTGTGCTATAGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: ALLDGRRGRGLL*DNCRACAIVCV
Trigger: CACACACACTATAGCACAAGCACGGCAGTTGTCTCACAAGAGGCCTCTGCCCCTCCTGCCATCCAGTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 72 bp TCTGGGGTTTACCACGCCTCCAAGTGGCACCTCAAGTaGGGTTGGGAGCAAGTGCTGCGCCATGATGGGCAT +
Preference number: 6 (lower is better)
Translates to: SGVYHASKWHLK*GWEQVLRHDGH
Trigger: ATGCCCATCATGGCGCAGCACTTGCTCCCAACCCAACTTGAGGTGCCACTTGGAGGCGTGGTAAACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CAA 90 bp CAAATGGGTCTTCCAATTCGGTTTCCAGGTAGTGGAGAGGGACCCTaGCCCCAGGTGGAGAGAGGGACATTCCATCCAGTCCGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: QMGLPIRFPGSGEGP*PQVERGTFHPVRWA
Trigger: TGCCCAACGGACTGGATGGAATGTCCCTCTCTCCACCTGGGGCAAGGGTCCCTCTCCACTACCTGGAAACCGAATTGGAAGACCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp AATGCCACTGTGAGAACTCAGCTGGTGGCCAAAGGCTaGGCTGAACTGAGGGAGTTGCTGCTTGGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: NATVRTQLVAKG*AELRELLLGRG
Trigger: ACCTCTCCCAAGCAGCAACTCCCTCAGTTCAGCGCAGCCTTTGGCCACCAGCTGAGTTCTCACAGTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp GGCATGGCTGCCGTCATGAAGTCCATGAAACTGTCCTaGGAAGGCTCTCTCCCCAAGTGCACTCTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: GMAAVMKSMKLS*EGSLPKCTLAD
Trigger: ATCAGCCAGAGTGCACTTGGGGAGAGAGCCTTCCCAGGACAGTTTCATGGACTTCATGACGGCAGCCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp GCATTGGTAGGCTGGTGTTCTGAGGTTGAGGTGACTTaGAGACTGAACCCTGCGGTGGCGCTGGAGGTTTTA +
Preference number: 6 (lower is better)
Translates to: ALVGWCSEVEVT*RLNPAVALEVL
Trigger: TAAAACCTCCAGCGCCACCGCAGGGTTCAGTCTGCAAGTCACCTCAACCTCAGAACACCAGCCTACCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp CCAATGGTACTCAGGCACTCGAGAGAAGTTACAGCCTaGAAGGCCCGTTCAAGCTCCTCAGCCTCTTCGGTA +
Preference number: 6 (lower is better)
Translates to: PMVLRHSREVTA*KARSSSSASSV
Trigger: TACCGAAGAGGCTGAGGAGCTTGAACGGGCCTTGCAGGCTGTAACTTCTCTCGAGTGCCTGAGTACCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp TCCATGAAACTGTCCTGGGAAGGCTCTCTCCCCAAGTaGACTCTGGCTGATCAGAGTGGCAGAAGTAAGGCC +
Preference number: 6 (lower is better)
Translates to: SMKLSWEGSLPK*TLADQSGRSKA
Trigger: GGCCTTACTTCTGCCACTCTGATCAGCCAGAGTGCACTTGGGGAGAGAGCCTTCCCAGGACAGTTTCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp CCTCCAAGTGGCACCTCAAGTTGGGTTGGGAGCAAGTaGTGCGCCATGATGGGCATCTCTGCTGAAAAGGTA +
Preference number: 6 (lower is better)
Translates to: PPSGTSSWVGSK*CAMMGISAEKV
Trigger: TACCTTTTCAGCAGAGATGCCCATCATGGCGCAGCACTTGCTCCCAACCCAACTTGAGGTGCCACTTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp CACTACAGGCACTGCGAGGACATAACACCAGAGAGCTaGTCCTCTGCCCTCCGAAACGACAACTTTCCTACC +
Preference number: 6 (lower is better)
Translates to: HYRHCEDITPES*SSALRNDNFPT
Trigger: GGTAGGAAAGTTGTCGTTTCGGAGGGCAGAGGAGCAGCTCTCTGGTGTTATGTCCTCGCAGTGCCTGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414320.1
ENST00000637545.1
CDS CCA 72 bp CTATCTGACAACTCCTGGACTGGCACACCATCTGACTaGGCAAGGACCCCAATGGTACTCAGGCACTCGAGA +
Preference number: 6 (lower is better)
Translates to: LSDNSWTGTPSD*ARTPMVLRHSR
Trigger: TCTCGAGTGCCTGAGTACCATTGGGGTCCTTGCCCAGTCAGATGGTGTGCCAGTCCAGGAGTTGTCAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp GTGGAGAACACCCCTATTCCTCTATCTGACAACTCCTaGACTGGCACACCATCTGACTGGGCAAGGACCCCA +
Preference number: 6 (lower is better)
Translates to: VENTPIPLSDNS*TGTPSDWARTP
Trigger: TGGGGTCCTTGCCCAGTCAGATGGTGTGCCAGTCCAGGAGTTGTCAGATAGAGGAATAGGGGTGTTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp AACTGTCCTGGGAAGGCTCTCTCCCCAAGTGCACTCTaGCTGATCAGAGTGGCAGAAGTAAGGCCAACGTTG +
Preference number: 6 (lower is better)
Translates to: NCPGKALSPSAL*LIRVAEVRPTL
Trigger: CAACGTTGGCCTTACTTCTGCCACTCTGATCAGCCAGAGTGCACTTGGGGAGAGAGCCTTCCCAGGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp CTGAGTTCGAAGTGGTGGGTGGCGTGGATAGGGAAGTaGAAAGAAGATGTCCATCTGCGCCGAGAAGGTTGC +
Preference number: 6 (lower is better)
Translates to: LSSKWWVAWIGK*KEDVHLRREGC
Trigger: GCAACCTTCTCGGCGCAGATGGACATCTTCTTTCCACTTCCCTATCCACGCCACCCACCACTTCGAACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp GCTGTGTGGTCTCTGAGTTCGAAGTGGTGGGTGGCGTaGATAGGGAAGTGGAAAGAAGATGTCCATCTGCGC +
Preference number: 6 (lower is better)
Translates to: AVWSLSSKWWVA*IGKWKEDVHLR
Trigger: GCGCAGATGGACATCTTCTTTCCACTTCCCTATCCACGCCACCCACCACTTCGAACTCAGAGACCACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 72 bp AGCAAAGCTTTCCTAAACGTATGCCGGCATTTCTTTTaGCGAGATTCTGCCCGCTCCAGGCGGCAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: SKAFLNVCRHFF*RDSARSRRQRC
Trigger: GCACCTCTGCCGCCTGGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCATACGTTTAGGAAAGCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp TTTAAAGAAGTAGATAAAGGTGACAGGTGGGAGTGCTaGTGCGGAGGCTGCTGCTGTGAAGGTGCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: FKEVDKGDRWEC*CGGCCCEGAGG
Trigger: CCCTCCTGCACCTTCACAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTTATCTACTTCTTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp GCACTGCGAGGACATAACACCAGAGAGCTGCTCCTCTaGCCTCCGAAACGACAACTTTCCTACCATCTTGGA +
Preference number: 6 (lower is better)
Translates to: ALRGHNTRELLL*PPKRQLSYHLG
Trigger: TCCAAGATGGTAGGAAAGTTGTCGTTTCGGAGGGCAGAGGAGCAGCTCTCTGGTGTTATGTCCTCGCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414320.1
ENST00000637545.1
CDS CCA 72 bp GGCTGTTGCAGTACCTACGATCCTCTGATTTGGGGATaGGGTTGGTGCAGCGTTGGCTGTTATACTTGGCCA +
Preference number: 6 (lower is better)
Translates to: GCCSTYDPLIWG*GWCSVGCYTWP
Trigger: TGGCCAAGTATAACAGCCAACGCTGCACCAACCCCATCCCCAAATCAGAGGATCGTAGGTACTGCAACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 90 bp GGCCGCCTGCAGCAAAGCTTTCCTAAACGTATGCCGGCATTTCTTTaGACGAGATTCTGCCCGCTCCAGGCGGCAGAGGTGCTTATATTT +
Preference number: 6 (lower is better)
Translates to: GRLQQSFPKRMPAFL*TRFCPLQAAEVLIF
Trigger: AAATATAAGCACCTCTGCCGCCTGGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCATACGTTTAGGAAAGCTTTGCTGCAGGCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 90 bp GTGGATAGGGAAGTGGAAAGAAGATGTCCATCTGCGCCGAGAAGGTaGCTAAATGGAGAGGGGTCTCCAAGGTTGACAGGGAGATTGCCC +
Preference number: 6 (lower is better)
Translates to: VDREVERRCPSAPRR*LNGEGSPRLTGRLP
Trigger: GGGCAATCTCCCTGTCAACCTTGGAGACCCCTCTCCATTTAGCAACCTTCTCGGCGCAGATGGACATCTTCTTTCCACTTCCCTATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 72 bp CGACTGCATGCAGCTCTCCGCAGTTCTTGTATTAACTaGCCAGTGCATTCTGGTTCTTTACTGGCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: RLHAALRSSCIN*PVHSGSLLAAC
Trigger: GCAGGCGGCCAGTAAAGAACCAGAATGCACTGGTCAGTTAATACAAGAACTGCGGAGAGCTGCATGCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 72 bp AGTGTGAGTGATCACTGCTGTATTGCTGTCGTGAGGTaGTTAGGTCATCTGCCTTGCTCAGCAGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: SVSDHCCIAVVR*LGHLPCSAAGQ
Trigger: CTGCCCAGCTGCTGAGCAAGGCAGATGACCTAATCACCTCACGACAGCAATACAGCAGTGATCACTCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CCA 72 bp GCAAGTGGCTGTTGCAGTACCTACGATCCTCTGATTTaGGGATGGGGTTGGTGCAGCGTTGGCTGTTATACT +
Preference number: 6 (lower is better)
Translates to: ASGCCSTYDPLI*GWGWCSVGCYT
Trigger: AGTATAACAGCCAACGCTGCACCAACCCCATCCCCAAATCAGAGGATCGTAGGTACTGCAACAGCCACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp AAGAAGATGTCCATCTGCGCCGAGAAGGTTGCTAAATaGAGAGGGGTCTCCAAGGTTGACAGGGAGATTGCC +
Preference number: 6 (lower is better)
Translates to: KKMSICAEKVAK*RGVSKVDREIA
Trigger: GGCAATCTCCCTGTCAACCTTGGAGACCCCTCTCCATTTAGCAACCTTCTCGGCGCAGATGGACATCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CAA 72 bp TGCAAGTGGCTGTTGCAGTACCTACGATCCTCTGATTaGGGGATGGGGTTGGTGCAGCGTTGGCTGTTATAC +
Preference number: 6 (lower is better)
Translates to: CKWLLQYLRSSD*GMGLVQRWLLY
Trigger: GTATAACAGCCAACGCTGCACCAACCCCATCCCCAAATCAGAGGATCGTAGGTACTGCAACAGCCACTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 90 bp GGGGTTGGTGCAGCGTTGGCTGTTATACTTGGCCACATATTCACATaGCTTGAAGGGGGCAGTCTTGTCCTCCAGAACGTGTCTGATACA +
Preference number: 6 (lower is better)
Translates to: GVGAALAVILGHIFT*LEGGSLVLQNVSDT
Trigger: TGTATCAGACACGTTCTGGAGGACAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCCAAGTATAACAGCCAACGCTGCACCAACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 72 bp CCGCATCATCATCATCTGACGCATGTCTTTGATATCTaGGGGTTTCCCGGATGGACCATGCAACCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: PHHHHLTHVFDI*GFPGWTMQPGR
Trigger: CCTACCAGGTTGCATGGTCCATCCGGGAAACCCTCAGATATCAAAGACATGCGTCAGATGATGATGATGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 72 bp GTCTGTGTTCACCTCTCGGCTCAAGGATTGTATTCCTaGAGCTCCAGTACCTGTGGAGAACACCCCTATTCC +
Preference number: 6 (lower is better)
Translates to: VCVHLSAQGLYS*SSSTCGEHPYS
Trigger: GGAATAGGGGTGTTCTCCACAGGTACTGGAGCTTCAGGAATACAATCCTTGAGCCGAGAGGTGAACACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp GGCGGCAGAGGTGCTTATATTTCTGCTGAAAGTAAGTaGAAAGTTGAGTCACCCTGGAGCTCCTACTCTCCG +
Preference number: 6 (lower is better)
Translates to: GGRGAYISAESK*KVESPWSSYSP
Trigger: CGGAGAGTAGGAGCTCCAGGGTGACTCAACTTTGCACTTACTTTCAGCAGAAATATAAGCACCTCTGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp CCTAAACGTATGCCGGCATTTCTTTTGACGAGATTCTaGCCGCTCCAGGCGGCAGAGGTGCTTATATTTCTG +
Preference number: 6 (lower is better)
Translates to: PKRMPAFLLTRF*PLQAAEVLIFL
Trigger: CAGAAATATAAGCACCTCTGCCGCCTGGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCATACGTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp GCACAGAGCACTGCTGTCCATCTGCAAACTTGGCTGTaGAACTTGAGAAGAGCTGCTGAGAGTGGTTCAAGA +
Preference number: 6 (lower is better)
Translates to: AQSTAVHLQTWL*NLRRAAESGSR
Trigger: TCTTGAACCACTCTCAGCAGCTCTTCTCAAGTTGCACAGCCAAGTTTGCAGATGGACAGCAGTGCTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp AAACTGGCACAGAGCACTGCTGTCCATCTGCAAACTTaGCTGTGCAACTTGAGAAGAGCTGCTGAGAGTGGT +
Preference number: 6 (lower is better)
Translates to: KLAQSTAVHLQT*LCNLRRAAESG
Trigger: ACCACTCTCAGCAGCTCTTCTCAAGTTGCACAGCCAAGTTTGCAGATGGACAGCAGTGCTCTGTGCCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 72 bp GCAGCGTTGGCTGTTATACTTGGCCACATATTCACATaGCTTGAAGGGGGCAGTCTTGTCCTCCAGAACGTG +
Preference number: 6 (lower is better)
Translates to: AALAVILGHIFT*LEGGSLVLQNV
Trigger: CACGTTCTGGAGGACAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCCAAGTATAACAGCCAACGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 90 bp AAGTGGCTGTTGCAGTACCTACGATCCTCTGATTTGGGGATGGGGTaGGTGCAGCGTTGGCTGTTATACTTGGCCACATATTCACATTGC +
Preference number: 6 (lower is better)
Translates to: KWLLQYLRSSDLGMG*VQRWLLYLATYSHC
Trigger: GCAATGTGAATATGTGGCCAAGTATAACAGCCAACGCTGCACCAACCCCATCCCCAAATCAGAGGATCGTAGGTACTGCAACAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 90 bp TCCTCCTGGTTCAATTCCAAGTCATGTGGAATGTCAGTGATCTCATaGGCAATGTCATCCGGCAACTCATCAGCACTCAGCTCTGGCGTG +
Preference number: 6 (lower is better)
Translates to: SSWFNSKSCGMSVIS*AMSSGNSSALSSGV
Trigger: CACGCCAGAGCTGAGTGCTGATGAGTTGCCGGATGACATTGCCAATGAGATCACTGACATTCCACATGACTTGGAATTGAACCAGGAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CAA 90 bp CACAGACACCCTCAGTTAGGGGAGGGAAAGGGAGAAGATGCATTATaGGTACTTGTAGCTGTGGCACCTGTTACTGTGAAGCCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: HRHPQLGEGKGEDAL*VLVAVAPVTVKPVG
Trigger: TCCTACAGGCTTCACAGTAACAGGTGCCACAGCTACAAGTACCAATAATGCATCTTCTCCCTTTCCCTCCCCTAACTGAGGGTGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS TCA 72 bp GTTGAGTCGCCTCTGCTTGCACAGTTTGGGGCTATATaGGCACAAGGGCTTATTGTCAACCTCAGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: VESPLLAQFGAI*AQGLIVNLREV
Trigger: CACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGAGGCGACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000414320.1
ENST00000636453.2
ENST00000637545.1
CDS GCA 72 bp GGGGAAACAGATCAGTGTCCAACTGATGTTTCTGGGTaGACAGTTTCACCAGTCTCTGCAGTCGGCTTATAC +
Preference number: 6 (lower is better)
Translates to: GETDQCPTDVSG*TVSPVSAVGLY
Trigger: GTATAAGCCGACTGCAGAGACTGGTGAAACTGTGCACCCAGAAACATCAGTTGGACACTGATCTGTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS GCA 72 bp ATGCAGCTCTCCGCAGTTCTTGTATTAACTGACCAGTaGATTCTGGTTCTTTACTGGCCGCCTGCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: MQLSAVLVLTDQ*ILVLYWPPAAK
Trigger: CTTTGCTGCAGGCGGCCAGTAAAGAACCAGAATGCACTGGTCAGTTAATACAAGAACTGCGGAGAGCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp CGATCCTCTGATTTGGGGATGGGGTTGGTGCAGCGTTaGCTGTTATACTTGGCCACATATTCACATTGCTTG +
Preference number: 6 (lower is better)
Translates to: RSSDLGMGLVQR*LLYLATYSHCL
Trigger: CAAGCAATGTGAATATGTGGCCAAGTATAACAGCCAACGCTGCACCAACCCCATCCCCAAATCAGAGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 72 bp CGTTGGCTGTTATACTTGGCCACATATTCACATTGCTaGAAGGGGGCAGTCTTGTCCTCCAGAACGTGTCTG +
Preference number: 6 (lower is better)
Translates to: RWLLYLATYSHC*KGAVLSSRTCL
Trigger: CAGACACGTTCTGGAGGACAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCCAAGTATAACAGCCAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 90 bp TTGGTGCAGCGTTGGCTGTTATACTTGGCCACATATTCACATTGCTaGAAGGGGGCAGTCTTGTCCTCCAGAACGTGTCTGATACAGAAG +
Preference number: 6 (lower is better)
Translates to: LVQRWLLYLATYSHC*KGAVLSSRTCLIQK
Trigger: CTTCTGTATCAGACACGTTCTGGAGGACAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCCAAGTATAACAGCCAACGCTGCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 72 bp AAGGATACCACAGTTTGGAATGCCGCAGAATCAGGATaGAGCAGATTGTCTGTAATCCCAGCCACTTGGGAG +
Preference number: 6 (lower is better)
Translates to: KDTTVWNAAESG*SRLSVIPATWE
Trigger: CTCCCAAGTGGCTGGGATTACAGACAATCTGCTTCATCCTGATTCTGCGGCATTCCAAACTGTGGTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414320.1
ENST00000637545.1
CDS CCA 72 bp GGCTCAAGGATTGTATTCCTGAAGCTCCAGTACCTGTaGAGAACACCCCTATTCCTCTATCTGACAACTCCT +
Preference number: 6 (lower is better)
Translates to: GSRIVFLKLQYL*RTPLFLYLTTP
Trigger: AGGAGTTGTCAGATAGAGGAATAGGGGTGTTCTCCACAGGTACTGGAGCTTCAGGAATACAATCCTTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS CAA 90 bp CGCCTCTGCTTGCACAGTTTGGGGCTATATGAGCACAAGGGCTTATaGTCAACCTCAGAGAAGTGTATATGTTTCCCTTCATACATCACG +
Preference number: 6 (lower is better)
Translates to: RLCLHSLGLYEHKGL*STSEKCICFPSYIT
Trigger: CGTGATGTATGAAGGGAAACATATACACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGAGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000414320.1
ENST00000636453.2
ENST00000637545.1
CDS TCA 72 bp TCCAAACCTAAATGGGGAAACAGATCAGTGTCCAACTaGTGTTTCTGGGTGCACAGTTTCACCAGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SKPKWGNRSVSN*CFWVHSFTSLC
Trigger: GCAGAGACTGGTGAAACTGTGCACCCAGAAACATCAGTTGGACACTGATCTGTTTCCCCATTTAGGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS TCA 72 bp CCTCCTGGTTCAATTCCAAGTCATGTGGAATGTCAGTaGTCTCATTGGCAATGTCATCCGGCAACTCATCAG +
Preference number: 6 (lower is better)
Translates to: PPGSIPSHVECQ*SHWQCHPATHQ
Trigger: CTGATGAGTTGCCGGATGACATTGCCAATGAGATCACTGACATTCCACATGACTTGGAATTGAACCAGGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403263.6
ENST00000636453.2
CDS GCA 72 bp TGTCGAACTTTTAAAATCTCTGTCTCTCTCTGGCGCTaGCGATTCTGGGCCAACTTGCTCTGCAACTTCTTT +
Preference number: 6 (lower is better)
Translates to: CRTFKISVSLWR*RFWANLLCNFF
Trigger: AAAGAAGTTGCAGAGCAAGTTGGCCCAGAATCGGCAGCGCCAGAGAGAGACAGAGATTTTAAAAGTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp TTTAAAATCTCTGTCTCTCTCTGGCGCTGCCGATTCTaGGCCAACTTGCTCTGCAACTTCTTTCTCACAGTT +
Preference number: 6 (lower is better)
Translates to: FKISVSLWRCRF*ANLLCNFFLTV
Trigger: AACTGTGAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATCGGCAGCGCCAGAGAGAGACAGAGATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp ATTTCTGCTGAAAGTAAGTGCAAAGTTGAGTCACCCTaGAGCTCCTACTCTCCGCATCATCATCATCTGACG +
Preference number: 6 (lower is better)
Translates to: ISAESKCKVESP*SSYSPHHHHLT
Trigger: CGTCAGATGATGATGATGCGGAGAGTAGGAGCTCCAGGGTGACTCAACTTTGCACTTACTTTCAGCAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp TTCACACAGAGGTGTCTGATGTGTAATGTCAAAAACTaGCACAGAGCACTGCTGTCCATCTGCAAACTTGGC +
Preference number: 6 (lower is better)
Translates to: FTQRCLMCNVKN*HRALLSICKLG
Trigger: GCCAAGTTTGCAGATGGACAGCAGTGCTCTGTGCCAGTTTTTGACATTACACATCAGACACCTCTGTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 72 bp GAGGTGCTTATATTTCTGCTGAAAGTAAGTGCAAAGTaGAGTCACCCTGGAGCTCCTACTCTCCGCATCATC +
Preference number: 6 (lower is better)
Translates to: EVLIFLLKVSAK*SHPGAPTLRII
Trigger: GATGATGCGGAGAGTAGGAGCTCCAGGGTGACTCAACTTTGCACTTACTTTCAGCAGAAATATAAGCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CCA 72 bp GTTCAAGAGGATATGTTGGAAACAATGTCTGGTGAATaGAAGGGCTTTGTTAGCGCACTGTTCACCCTTCAC +
Preference number: 6 (lower is better)
Translates to: VQEDMLETMSGE*KGFVSALFTLH
Trigger: GTGAAGGGTGAACAGTGCGCTAACAAAGCCCTTCCATTCACCAGACATTGTTTCCAACATATCCTCTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000424117.5
ENST00000635981.1
ENST00000636453.2
CDS CAA 72 bp TTGCACAGTTTGGGGCTATATGAGCACAAGGGCTTATaGTCAACCTCAGAGAAGTGTATATGTTTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: LHSLGLYEHKGL*STSEKCICFPS
Trigger: TGAAGGGAAACATATACACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTCATATAGCCCCAAACTGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403263.6
ENST00000414320.1
ENST00000636453.2
ENST00000637545.1