Pregenerated sensors for INO80B (Homo sapiens)
Ensembl gene IDs: ENSG00000115274Ensembl transcript IDs: ENST00000233331.12, ENST00000409917.5, ENST00000455562.1, ENST00000471577.5, ENST00000473618.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCGCCCACTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTaGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGC | + |
|
Preference number: 1 (lower is better) Translates to: PRPLVAAVLVRRSIV*FLCSSARRAAWSRR Trigger: GCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAGTGGGCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| 3UTR GCA 90 bp | CGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTaGCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGCCCGCTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: RSLGEALDSLVLVLF*PPRRLEPPLPRPLL Trigger: GAGGAGCGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR GCA 90 bp | CTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTaGTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGCC | + |
|
Preference number: 1 (lower is better) Translates to: LVAAVLVRRSIVWFL*SSARRAAWSRRFRA Trigger: GGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR CCA 90 bp | CGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTaGAGCCGCCGCTTCCGCGCCCGCTCCTCGCGCTTCAGCAGCATC | + |
|
Preference number: 1 (lower is better) Translates to: RSIVWFLCSSARRAA*SRRFRARSSRFSSI Trigger: GATGCTGCTGAAGCGCGAGGAGCGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR TCA 90 bp | GGTGGGCAGCCCTCAGCTACAGGCAGCGGCAGCATAGGGGAAGGTTaGCTCCGCGCCTTCTGGAGCAGAGCTCGCTGTCGAGCAGTAAGC | + |
|
Preference number: 1 (lower is better) Translates to: GGQPSATGSGSIGEG*LRAFWSRARCRAVS Trigger: GCTTACTGCTCGACAGCGAGCTCTGCTCCAGAAGGCGCGGAGTCAACCTTCCCCTATGCTGCCGCTGCCTGTAGCTGAGGGCTGCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR CAA 90 bp | CCACTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTaGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGC | + |
|
Preference number: 2 (lower is better) Translates to: PLVAAVLVRRSIVWF*CSSARRAAWSRRFR Trigger: GCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| 3UTR-3UTR GCA 90 bp | GGAACCCTGTGCTCCGCTGCAGTAGCGCACCATGGGGGCCGGAGCCGCAGCCCGATAGTCTGGTTCTTGTaGTCTTCTGCCCGCCGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: GTLCSAAVAHHGGRSRSPIVWFL*SSARRA Trigger: GGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTAT...CGGGCTGCGGCTCCGGCCCCCATGGTGCGCTACTGCAGCGGAGCACAGGGTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCAGCATCTCCTCTGTaGGGGCGGGAGGTGGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: AVLVRRSIVWFLCSSARRAASPL*GREVGS Trigger: GCTGCCCACCTCCCGCCCTCACAGAGGAGATGCTGC...GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR CAA 90 bp | AGGTGGGCAGCCCTCAGCTACAGGCAGCGGCAGCATAGGGGAAGGTaGACTCCGCGCCTTCTGGAGCAGAGCTCGCTGTCGAGCAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: RWAALSYRQRQHRGR*TPRLLEQSSLSSSK Trigger: CTTACTGCTCGACAGCGAGCTCTGCTCCAGAAGGCGCGGAGTCAACCTTCCCCTATGCTGCCGCTGCCTGTAGCTGAGGGCTGCCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGTTCTTGTGCTCTTCTaGCCGCCGCGCCGCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: AVLVRRSIVWFLCSSARRVLVLF*PPRRLE Trigger: CTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAAC...GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCAAGGGTGGAACCCTGTaGTCCGCTGCAGTAGCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: AVLVRRSIVWFLCSSARRKGGTL*SAAVAH Trigger: GTGCGCTACTGCAGCGGAGCACAGGGTTCCACCCTT...GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| 3UTR-3UTR CCA 90 bp | GGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGAGGCGCTCGATAGTCTaGTTCTTGTGCTCTTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: GEALDSLVLVLFCPPRRLRRSIV*FLCSSA Trigger: GGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCT...CAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR-3UTR GCA 90 bp | CGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGATAGTCTGGTTCTTGTaGTCTTCTGCCCGCCGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: RRSLGEALDSLVLVLFCPIVWFL*SSARRA Trigger: GGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTAT...CGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCAGGCGCTCGATAGTCTaGTTCTTGTGCTCTTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AVLVRRSIVWFLCSSARRRRSIV*FLCSSA Trigger: GGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCT...GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR CAA 90 bp | GCCTTCTGGAGCAGAGCTCGCTGTCGAGCAGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCTCCATTGTCATCCAGCTCCCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: AFWSRARCRAVSSRS*ISFLRSPLSSSSPF Trigger: GAAGGGGGAGCTGGATGACAATGGAGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTACTGCTCGACAGCGAGCTCTGCTCCAGAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR CCA 72 bp | GTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTaGAGCCGCCGCTTCCGCGCCCGCTCCTCGCGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VWFLCSSARRAA*SRRFRARSSRF Trigger: GAAGCGCGAGGAGCGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR TCA 72 bp | GCGCCCGCTCCTCGCGCTTCAGCAGCATCTCCTCTGTaGGGGCGGGAGGTGGGCAGCCCTCAGCTACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: APAPRASAASPL*GREVGSPQLQA Trigger: TGCCTGTAGCTGAGGGCTGCCCACCTCCCGCCCTCACAGAGGAGATGCTGCTGAAGCGCGAGGAGCGGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR GCA 72 bp | CAGGTGGGAAGGAAAGGGTGGAACCCTGTGCTCCGCTaGAGTAGCGCACCATGGGGGCCGGAGCCGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QVGRKGWNPVLR*SSAPWGPEPQP Trigger: GGGCTGCGGCTCCGGCCCCCATGGTGCGCTACTGCAGCGGAGCACAGGGTTCCACCCTTTCCTTCCCACCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| 3UTR GCA 72 bp | GCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTaGTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: AVLVRRSIVWFL*SSARRAAWSRR Trigger: GCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR CCA 72 bp | CTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTaGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LVAAVLVRRSIV*FLCSSARRAAW Trigger: CCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTCAGCTACAGGCAGCGGCAGCATAGGGGAAGGTTGACTCCGCGCCTTCTGGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALSYRQRQHRGRLTPRLLVSSRS*ISFLRS Trigger: AGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTAC...CAGAAGGCGCGGAGTCAACCTTCCCCTATGCTGCCGCTGCCTGTAGCTGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGCCCGCTCCAACCCTGTGCTCCGCTaGAGTAGCGCACCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSSARRAAWSRRFRARSNPVLR*SSAPWG Trigger: CCCCCATGGTGCGCTACTGCAGCGGAGCACAGGGTT...GGAGCGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGTTCTTGTGCTCTTCTaGCCGCCGCGCCGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWFLCSSARRAAWSRRFRVLVLF*PPRRLE Trigger: CTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAAC...GCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGCCCGGTGGGAAGGAAAGGGTaGAACCCTGTGCTCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLVLFCPPRRLEPPLPRPVGRKG*NPVLRC Trigger: GCAGCGGAGCACAGGGTTCCACCCTTTCCTTCCCAC...CGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR TCA 90 bp | GGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGGCGAGGGGGATGGCCGCTaGGACACTGCCGTGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKILKSGHGTGRRVRVKGEGDGR*DTAVGA Trigger: CGCCCCCACGGCAGTGTCTCAGCGGCCATCCCCCTC...GCCCTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTATGGCCGCTGAGACACTaGCGTGGGGGCGGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWGRYSRAGMGRGAESGLWPLRH*RGGGDA Trigger: GGCGTCCCCGCCCCCACGGCAGTGTCTCAGCGGCCA...TAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR TCA 90 bp | TGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGCCTCCTCCTCTTCCTCCTaGCCCCCTAACCCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WFLCSSARRAAWSRRFRASSSSS*PPNPPD Trigger: ATCAGGAGGGTTAGGGGGTCAGGAGGAAGAGGAGGA...GGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGCAGCATCTCCTCTGTaGGGGCGGGAGGTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GEALDSLVLVLFCPPRRLAASPL*GREVGS Trigger: GCTGCCCACCTCCCGCCCTCACAGAGGAGATGCTGC...CAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| 3UTR CAA 72 bp | GCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTaGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AAVLVRRSIVWF*CSSARRAAWSR Trigger: GCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR TCA 90 bp | GGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGGCCGCAGCATCTCCTCTGTaGGGGCGGGAGGTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRYSRAGMGRGAESGLRAAASPL*GREVGS Trigger: GCTGCCCACCTCCCGCCCTCACAGAGGAGATGCTGC...GGCCCTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | TCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCAGCCAGGCACGGTACTaGTCAAGGGGGACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIVWFLCSSARRAAWSRRSQARY*SRGTPS Trigger: GGAAGGAGTCCCCCTTGAGCAGTACCGTGCCTGGCT...GCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR GCA 90 bp | GGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGGCAGAGTGCCTGGCCTGTaGGGGAGCAAGCGTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKILKSGHGTGRRVRVKGRVPGL*GSKRSG Trigger: GCCGCTACGCTTGCTCCCGCACAGGCCAGGCACTCT...GCCCTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCTTGGCAGGGGACGGCTaGGTGGGCCCGGCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVLVRRSIVWFLCSSARRLAGDG*VGPASS Trigger: AGAAGACGCCGGGCCCACGCAGCCGTCCCCTGCCAA...GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CCA 90 bp | ATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTGCACTCCATGGCCATaGGCACCCGCCAGGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IGWGRYSRAGMGRGAESGCTPWP*APARLN Trigger: GTTGAGCCTGGCGGGTGCCCATGGCCATGGAGTGCA...CCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | CCCCGCCCACTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCACTCCATGGCCATaGGCACCCGCCAGGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRPLVAAVLVRRSIVWFLCTPWP*APARLN Trigger: GTTGAGCCTGGCGGGTGCCCATGGCCATGGAGTGCA...CAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAGTGGGCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR CCA 90 bp | TTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCTGCAGTAGCGCACCATaGGGGCCGGAGCCGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIGWGRYSRAGMGRGAESCSSAP*GPEPQP Trigger: GGGCTGCGGCTCCGGCCCCCATGGTGCGCTACTGCA...GGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | GGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCTGCAGTAGCGCACCATaGGGGCCGGAGCCGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRSLGEALDSLVLVLFCCSSAP*GPEPQP Trigger: GGGCTGCGGCTCCGGCCCCCATGGTGCGCTACTGCA...GCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAAGGGTGGAACCCTGTaGTCCGCTGCAGTAGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GWGRYSRAGMGRGAESGLKGGTL*SAAVAH Trigger: GTGCGCTACTGCAGCGGAGCACAGGGTTCCACCCTT...TAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTTTCTTGTGCACTCCATaGCCATGGGCACCCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGKILKSGHGTGRRVRVFLCTP*PWAPAR Trigger: CCTGGCGGGTGCCCATGGCCATGGAGTGCACAAGAA...AACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR TCA 90 bp | AGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTGCCACAGCTTACTCATaGGGTCCTGCGAGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGKILKSGHGTGRRVRVATAYS*GPARKG Trigger: CCCTTTCCTCGCAGGACCTCATGAGTAAGCTGTGGC...AACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | TGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGAGCCAGGCACGGTACTaGTCAAGGGGGACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGRYSRAGMGRGAESGLRSQARY*SRGTPS Trigger: GGAAGGAGTCCCCCTTGAGCAGTACCGTGCCTGGCT...CCTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | TTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGTTCTTGTGCTCTTCTaGCCGCCGCGCCGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIGWGRYSRAGMGRGAESVLVLF*PPRRLE Trigger: CTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAAC...GGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | TCCCCGCCCACTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTTTCTTGTGCACTCCATaGCCATGGGCACCCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTGRRSLGEALDSLVLFLCTP*PWAPAR Trigger: CCTGGCGGGTGCCCATGGCCATGGAGTGCACAAGAA...AAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAGTGGGCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGAGACTACAGAGTGCCTaGCCTGTGCGGGAGCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WGRYSRAGMGRGAESGLRRLQSA*PVREQA Trigger: CGCTTGCTCCCGCACAGGCCAGGCACTCTGTAGTCT...CCTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR TCA 90 bp | TTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCATTTTGAGTTTGAGCTaGGGCTTGGCAGGGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRRSIVWFLCSSARRAAILSLS*GLAGDG Trigger: GCCGTCCCCTGCCAAGCCTCAGCTCAAACTCAAAAT...GGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR TCA 90 bp | AATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGTCCTCCTCTTCCTCCTaGCCCCCTAACCCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRVGKILKSGHGTGRRVRSSSSS*PPNPPD Trigger: ATCAGGAGGGTTAGGGGGTCAGGAGGAAGAGGAGGA...CCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGCCGCATCTGCAGGTTaGTGCGGTAGCACTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGKILKSGHGTGRRVRVKAASAG*CGSTED Trigger: GTCTTCAGTGCTACCGCATCAACCTGCAGATGCGGC...CTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | CTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGTTCTTGTGCTCTTCTaGCCGCCGCGCCGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVAAVLVRRSIVWFLCSSVLVLF*PPRRLE Trigger: CTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAAC...AGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGATAGTCTGGTTCTTGTaGTCTTCTGCCCGCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGKILKSGHGTGRRVRVKIVWFL*SSARRA Trigger: GGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTAT...CTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | GGATGTAATTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCTGAGACACTGCCGTaGGGGCGGGGACGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCNLIGWGRYSRAGMGRGAETLP*GRGRQV Trigger: CACCTGGCGTCCCCGCCCCCACGGCAGTGTCTCAGC...GCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAATTACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR TCA 90 bp | CCCACTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTCCTCCTCTTCCTCCTaGCCCCCTAACCCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTGRRSLGEALDSLVLVLSSSSS*PPNPPD Trigger: ATCAGGAGGGTTAGGGGGTCAGGAGGAAGAGGAGGA...GAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR GCA 90 bp | TGTAATTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCATTGGCAGGGGACGGCTaGGTGGGCCCGGCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CNLIGWGRYSRAGMGRGALAGDG*VGPASS Trigger: AGAAGACGCCGGGCCCACGCAGCCGTCCCCTGCCAA...TGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAATTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | CGCTGTCGAGCAGTAAGCAGCCGCTCATTGATCTCCTTCTTGAGGTCTCCATTGTTGGCAGGGGACGGCTaGGTGGGCCCGGCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCRAVSSRSLISFLRSPLLAGDG*VGPASS Trigger: AGAAGACGCCGGGCCCACGCAGCCGTCCCCTGCCAA...CAATGGAGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTACTGCTCGACAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| CDS-3UTR CCA 90 bp | AATTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGACTCAAGAGCGGGCATaGGACGGGGCGCAGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLIGWGRYSRAGMGRGAETQERA*DGAQSP Trigger: CGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGT...CTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | GGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCATAGTCTGGTTCTTGTaGTCTTCTGCCCGCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRSLGEALDSLVLVLFCIVWFL*SSARRA Trigger: GGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTAT...GCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR GCA 90 bp | AATTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGAACCCTGTGCTCCGCTaGAGTAGCGCACCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLIGWGRYSRAGMGRGAENPVLR*SSAPWG Trigger: CCCCCATGGTGCGCTACTGCAGCGGAGCACAGGGTT...CTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | CTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTAAGGGTGGAACCCTGTaGTCCGCTGCAGTAGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVAAVLVRRSIVWFLCSSKGGTL*SAAVAH Trigger: GTGCGCTACTGCAGCGGAGCACAGGGTTCCACCCTT...AGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGCCGGCGTCTTCTTCCTaGTGGTGTTTCTTCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGKILKSGHGTGRRVRVKPASSS*WCFFLC Trigger: ACACAAGAAGAAACACCATCAGGAAGAAGACGCCGG...CTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR GCA 90 bp | ACTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCATAGTCTGGTTCTTGTaGTCTTCTGCCCGCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGRRSLGEALDSLVLVLFIVWFL*SSARRA Trigger: GGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTAT...GAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR GCA 90 bp | TTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCTGAAGACTACAGAGTaGCTGGCCTGTGCGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FNRVGKILKSGHGTGRRVLKTTE*LACAGA Trigger: TGCTCCCGCACAGGCCAGGCACTCTGTAGTCTTCAG...GACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR TCA 90 bp | GCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCCCGGCGTCTTCTTCCTaGTGGTGTTTCTTCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVLVRRSIVWFLCSSARRPASSS*WCFFLC Trigger: ACACAAGAAGAAACACCATCAGGAAGAAGACGCCGG...GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR TCA 90 bp | TTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCATTTTGAGTTTGAGCTaGGGCTTGGCAGGGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNRVGKILKSGHGTGRRVILSLS*GLAGDG Trigger: GCCGTCCCCTGCCAAGCCTCAGCTCAAACTCAAAAT...GACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | TGTAATTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGTGGGAAGGAAAGGGTaGAACCCTGTGCTCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CNLIGWGRYSRAGMGRGAVGRKG*NPVLRC Trigger: GCAGCGGAGCACAGGGTTCCACCCTTTCCTTCCCAC...TGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAATTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | AATTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGAGGCGCTCGATAGTCTaGTTCTTGTGCTCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLIGWGRYSRAGMGRGAERRSIV*FLCSSA Trigger: GGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCT...CTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CCA 90 bp | GGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGGCTGTAATTTAATAGGGTaGGGAAGATACTCAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKILKSGHGTGRRVRVKGCNLIG*GRYSRA Trigger: CGCTCTTGAGTATCTTCCCCACCCTATTAAATTACA...GCCCTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| 3UTR CAA 72 bp | AGCAGAGCTCGCTGTCGAGCAGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCTCCATTGTCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRARCRAVSSRS*ISFLRSPLSSS Trigger: GCTGGATGACAATGGAGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTACTGCTCGACAGCGAGCTCTGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGCCCGCTCCAAGGTAGGAACACTCTaGGTCCCCAGGACTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCSSARRAAWSRRFRARSKVGTL*VPRTCP Trigger: GGGACAAGTCCTGGGGACCAAGAGTGTTCCTACCTT...GGAGCGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | GTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCGCCCGCTTGGTCCCCAGGACTaGTCCCCCAAGCTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLVLFCPPRRLEPPLPRPLGPQD*SPKLDF Trigger: AAAATCAAGCTTGGGGGACAAGTCCTGGGGACCAAG...CGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS CCA 90 bp | CATGGCCATGGGCACCCGCCAGGCTCAACTCCAGGGCTTCTCCTGTaGAAGGAAAGCCTGTCGACAGTGTTTGGCCGGAGGGTGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGHGHPPGSTPGLLL*KESLSTVFGRRVAG Trigger: CCCTGCCACCCTCCGGCCAAACACTGTCGACAGGCTTTCCTTCCACAGGAGAAGCCCTGGAGTTGAGCCTGGCGGGTGCCCATGGCCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471577.5 |
||
| CDS-3UTR CAA 90 bp | GTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTCCGCTTCTTGAGGTCTCCATaGTCATCCAGCTCCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VWFLCSSARRAAWSRRFRFLRSP*SSSSPF Trigger: GAAGGGGGAGCTGGATGACAATGGAGACCTCAAGAA...GCGGAAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS GCA 90 bp | CAGCCGCATCTGCAGGTTGATGCGGTAGCACTGAAGACTACAGAGTaGCTGGCCTGTGCGGGAGCAAGCGTAGCGGCGCGGATGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QPHLQVDAVALKTTE*LACAGASVAARMGT Trigger: TGTCCCCATCCGCGCCGCTACGCTTGCTCCCGCACAGGCCAGGCACTCTGTAGTCTTCAGTGCTACCGCATCAACCTGCAGATGCGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CAA 90 bp | GATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGAGCCGCCGCTTTCGATAGTCTGGTTCTaGTGCTCTTCTGCCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DSLVLVLFCPPRRLEPPLSIVWF*CSSARR Trigger: GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGA...AAGCGGCGGCTCCAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | AATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGCTGGTCGCCGCAGTCTaGGTGAGGCGCTCGATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NRVGKILKSGHGTGRRVRLVAAV*VRRSIV Trigger: GACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG...CCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CAA 90 bp | GTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGCAGCATAGGGGAAGGTaGACTCCGCGCCTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGKILKSGHGTGRRVRVKQHRGR*TPRLLE Trigger: CTCCAGAAGGCGCGGAGTCAACCTTCCCCTATGCTG...CTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CAA 90 bp | CCCCGCCCACTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTCGATAGTCTGGTTCTaGTGCTCTTCTGCCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRPLVAAVLVRRSIVWFLSIVWF*CSSARR Trigger: GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGA...CAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAGTGGGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS-3UTR CAA 90 bp | GCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCTGGTCGCCGCAGTCTaGGTGAGGCGCTCGATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AAVLVRRSIVWFLCSSARLVAAV*VRRSIV Trigger: GACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG...GCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | AGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGTAGGAACACTCTaGGTCCCCAGGACTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVGKILKSGHGTGRRVRVKVGTL*VPRTCP Trigger: GGGACAAGTCCTGGGGACCAAGAGTGTTCCTACCTT...AACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CAA 90 bp | GGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCTGGTCGCCGCAGTCTaGGTGAGGCGCTCGATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRRSLGEALDSLVLVLFCLVAAV*VRRSIV Trigger: GACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG...GCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | GGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGCGCCGCCTGGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GEALDSLVLVLFCPPRRLVSSRS*ISFLRS Trigger: AGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTAC...CAGGCGGCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | AATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGCTTGGTCCCCAGGACTaGTCCCCCAAGCTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: NRVGKILKSGHGTGRRVRLGPQD*SPKLDF Trigger: AAAATCAAGCTTGGGGGACAAGTCCTGGGGACCAAG...CCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CAA 90 bp | TGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCGGGTTAAGGTTCTTGAGGTCTCCATaGTCATCCAGCTCCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WGRYSRAGMGRGAESGLRFLRSP*SSSSPF Trigger: GAAGGGGGAGCTGGATGACAATGGAGACCTCAAGAA...CCTTAACCCGGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CAA 90 bp | TTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGCAGAGTCCTCGATAGTCTGGTTCTaGTGCTCTTCTGCCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LIGWGRYSRAGMGRGAESSIVWF*CSSARR Trigger: GCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGA...GGACTCTGCGCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS-3UTR CAA 90 bp | CGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTGCCCGCCGGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSLGEALDSLVLVLFCPPVSSRS*ISFLRS Trigger: AGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTAC...CGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | CAGCCGCTCATTGATCTCCTTCTTGAGGTCTCCATTGTCATCCAGCTCCCCCTTCAGCATAGGGGAAGGTaGACTCCGCGCCTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPLIDLLLEVSIVIQLPLQHRGR*TPRLLE Trigger: CTCCAGAAGGCGCGGAGTCAACCTTCCCCTATGCTG...AAGGGGGAGCTGGATGACAATGGAGACCTCAAGAAGGAGATCAATGAGCGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | CTGGTCGCCGCAGTCTTGGTGAGGCGCTCGATAGTCTGGTTCTTGTGCTCTTCTCTTGGTCCCCAGGACTaGTCCCCCAAGCTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVAAVLVRRSIVWFLCSSLGPQD*SPKLDF Trigger: AAAATCAAGCTTGGGGGACAAGTCCTGGGGACCAAG...AGAAGAGCACAAGAACCAGACTATCGAGCGCCTCACCAAGACTGCGGCGACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409917.5 ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | GTAAGCAGCCGCTCATTGATCTCCTTCTTGAGGTCTCCATTGTCATCCAGCTCCTTCTTGAGGTCTCCATaGTCATCCAGCTCCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSRSLISFLRSPLSSSSFLRSP*SSSSPF Trigger: GAAGGGGGAGCTGGATGACAATGGAGACCTCAAGAA...GGAGCTGGATGACAATGGAGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455562.1 |
||
| CDS-3UTR CAA 90 bp | GGATGTAATTTAATAGGGTGGGGAAGATACTCAAGAGCGGGCATGGGACGGGGCGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GCNLIGWGRYSRAGMGRGVSSRS*ISFLRS Trigger: AGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTAC...GCCCCGTCCCATGCCCGCTCTTGAGTATCTTCCCCACCCTATTAAATTACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS GCA 72 bp | TGCGGTAGCACTGAAGACTACAGAGTGCCTGGCCTGTaGGGGAGCAAGCGTAGCGGCGCGGATGGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: CGSTEDYRVPGL*GSKRSGADGDS Trigger: GCTGTCCCCATCCGCGCCGCTACGCTTGCTCCCGCACAGGCCAGGCACTCTGTAGTCTTCAGTGCTACCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS GCA 72 bp | CTGCAGGTTGATGCGGTAGCACTGAAGACTACAGAGTaGCTGGCCTGTGCGGGAGCAAGCGTAGCGGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LQVDAVALKTTE*LACAGASVAAR Trigger: CCGCGCCGCTACGCTTGCTCCCGCACAGGCCAGGCACTCTGTAGTCTTCAGTGCTACCGCATCAACCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233331.12 |
||
| CDS CCA 72 bp | GGGCACCCGCCAGGCTCAACTCCAGGGCTTCTCCTGTaGAAGGAAAGCCTGTCGACAGTGTTTGGCCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GHPPGSTPGLLL*KESLSTVFGRR Trigger: CCTCCGGCCAAACACTGTCGACAGGCTTTCCTTCCACAGGAGAAGCCCTGGAGTTGAGCCTGGCGGGTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471577.5 |
||
| CDS CAA 90 bp | CCCGCAGTACTCGCTGTTACCATAACAACAGCACCGCCTTTCTCCTaGCCACCTGTGGCCGAAGTACCCTGGACTCTCCGAGGAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PAVLAVTITTAPPFS*PPVAEVPWTLRGAR Trigger: TCTTGCTCCTCGGAGAGTCCAGGGTACTTCGGCCACAGGTGGCAAGGAGAAAGGCGGTGCTGTTGTTATGGTAACAGCGAGTACTGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471577.5 |
||
| CDS CCA 72 bp | CCGCCTTTCTCCTTGCCACCTGTGGCCGAAGTACCCTaGACTCTCCGAGGAGCAAGAACGGGACTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPFSLPPVAEVP*TLRGARTGLLF Trigger: GAAAAGAAGTCCCGTTCTTGCTCCTCGGAGAGTCCAGGGTACTTCGGCCACAGGTGGCAAGGAGAAAGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471577.5 ENST00000473618.5 |
||
| CDS CCA 72 bp | GTGGCAGGGGAAGCCCTGAATAACCTAAGCCCCTACTaGATCCCACCCTTCCCGCAGTACTCGCTGTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: VAGEALNNLSPY*IPPFPQYSLLP Trigger: TGGTAACAGCGAGTACTGCGGGAAGGGTGGGATCCAGTAGGGGCTTAGGTTATTCAGGGCTTCCCCTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471577.5 |
||
| CDS CAA 72 bp | GGAAGGAAAGCCATAACAACAGCACCGCCTTTCTCCTaGCCACCTGTGGCCGAAGTACCCTGGACTCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GRKAITTAPPFS*PPVAEVPWTLR Trigger: TCGGAGAGTCCAGGGTACTTCGGCCACAGGTGGCAAGGAGAAAGGCGGTGCTGTTGTTATGGCTTTCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473618.5 |
||
| CDS CAA 72 bp | CTCGCTGTTACCATAACAACAGCACCGCCTTTCTCCTaGCCACCTGTGGCCGAAGTACCCTGGACTCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LAVTITTAPPFS*PPVAEVPWTLR Trigger: TCGGAGAGTCCAGGGTACTTCGGCCACAGGTGGCAAGGAGAAAGGCGGTGCTGTTGTTATGGTAACAGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471577.5 |
||
| CDS CAA 90 bp | GCGCTTCAGCAGCATCTCCTCTGTCGAGCAGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCTCCATTGTCATCCAGCTCCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALQQHLLCRAVSSRS*ISFLRSPLSSSSPF Trigger: GAAGGGGGAGCTGGATGACAATGGAGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTACTGCTCGACAGAGGAGATGCTGCTGAAGCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS CAA 90 bp | TTCTCCTGTGGAAGGAAAGCCATAACAACAGCACCGCCTTTCTCCTaGCCACCTGTGGCCGAAGTACCCTGGACTCTCCGAGGAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSCGRKAITTAPPFS*PPVAEVPWTLRGAR Trigger: TCTTGCTCCTCGGAGAGTCCAGGGTACTTCGGCCACAGGTGGCAAGGAGAAAGGCGGTGCTGTTGTTATGGCTTTCCTTCCACAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473618.5 |
||
| CDS CAA 72 bp | CAGCATCTCCTCTGTCGAGCAGTAAGCAGCCGCTCATaGATCTCCTTCTTGAGGTCTCCATTGTCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QHLLCRAVSSRS*ISFLRSPLSSS Trigger: GCTGGATGACAATGGAGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTACTGCTCGACAGAGGAGATGCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409917.5 |
||
| CDS CAA 90 bp | TCTCCGAGGAGCAAGAACGGGACTTCTTTTCTAACACGACCTAAATaGCTTGATCTATTCGCGCTTACCCGGCTCAGGGGCCTCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRSKNGTSFLTRPK*LDLFALTRLRGLHS Trigger: GCTATGGAGGCCCCTGAGCCGGGTAAGCGCGAATAGATCAAGCAATTTAGGTCGTGTTAGAAAAGAAGTCCCGTTCTTGCTCCTCGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000471577.5 ENST00000473618.5 |
||
| CDS CAA 72 bp | AGCAAGAACGGGACTTCTTTTCTAACACGACCTAAATaGCTTGATCTATTCGCGCTTACCCGGCTCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SKNGTSFLTRPK*LDLFALTRLRG Trigger: GCCCCTGAGCCGGGTAAGCGCGAATAGATCAAGCAATTTAGGTCGTGTTAGAAAAGAAGTCCCGTTCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000471577.5 ENST00000473618.5 |
||