RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INO80 (Homo sapiens)

Ensembl gene IDs: ENSG00000128908

Ensembl transcript IDs: ENST00000401393.7, ENST00000557849.1, ENST00000558270.1, ENST00000558357.6, ENST00000559995.2, ENST00000561172.1, ENST00000616814.4, ENST00000648947.1

Found 1152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTaGGAGGGCCGGTGCCGAGCCTGCCCCCTCTCTCCGCCCTCTTCA +
Preference number: 1 (lower is better)
Translates to: PLCLYWRAASSGWPG*EGRCRACPLSPPSS
Trigger: TGAAGAGGGCGGAGAGAGGGGGCAGGCTCGGCACCGGCCCTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp GGCAGCTGCAGAGGCCGCTGCAGCCCCGGCTTTGGCTCCTGCCATTaGAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: GSCRGRCSPGFGSCH*SSTACRGLSAPALP
Trigger: GGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp GGCATAGGCAGCTGCAGAGGCCGCTGCAGCCCCGGCTTTGGCTCCTaGCATTGCAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCC +
Preference number: 1 (lower is better)
Translates to: GIGSCRGRCSPGFGS*HCSSTACRGLSAPA
Trigger: GGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp AGGCCGCTGCAGCCCCGGCTTTGGCTCCTGCCATTGCAGCAGCACTaGCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGG +
Preference number: 1 (lower is better)
Translates to: RPLQPRLWLLPLQQH*LPWTFGSGPSLLLW
Trigger: CCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp CGCTGCAGCCCCGGCTTTGGCTCCTGCCATTGCAGCAGCACTGCCTaGCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGCTGT +
Preference number: 1 (lower is better)
Translates to: RCSPGFGSCHCSSTA*RGLSAPALPCSFGC
Trigger: ACAGCCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp CTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGCTGTaGTTCCTGAACCTTTGGGGCGGCCTCGGCTTCGGGCTGAGTGAC +
Preference number: 1 (lower is better)
Translates to: LPWTFGSGPSLLLWL*FLNLWGGLGFGLSD
Trigger: GTCACTCAGCCCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp AGACACGTTGTACCCGTATGCGGCATAGGCAGCTGCAGAGGCCGCTaGAGCCCCGGCTTTGGCTCCTGCCATTGCAGCAGCACTGCCTGC +
Preference number: 1 (lower is better)
Translates to: RHVVPVCGIGSCRGR*SPGFGSCHCSSTAC
Trigger: GCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp CGGAGGGCCCAGATGGTTACCGTCCTCCAGAGGGGTTGGTGCCTTTaGCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCA +
Preference number: 1 (lower is better)
Translates to: RRAQMVTVLQRGWCL*PVSGPESLGLGCWS
Trigger: TGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTGGGCCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp GGAAGTCGGAGGGCCCAGATGGTTACCGTCCTCCAGAGGGGTTGGTaGCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGC +
Preference number: 1 (lower is better)
Translates to: GSRRAQMVTVLQRGW*LCPVSGPESLGLGC
Trigger: GCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp GGGACATCAGGCAGGGACAGGCAGAAACACCTCCCATGCAAACACTaGCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGG +
Preference number: 1 (lower is better)
Translates to: GTSGRDRQKHLPCKH*PSVSTGGQQAQAGR
Trigger: CCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAGTGTTTGCATGGGAGGTGTTTCTGCCTGTCCCTGCCTGATGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR CCA 90 bp GAAGGAAGTCGGAGGGCCCAGATGGTTACCGTCCTCCAGAGGGGTTaGTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGC +
Preference number: 1 (lower is better)
Translates to: EGSRRAQMVTVLQRG*CLCPVSGPESLGLG
Trigger: GCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGACTTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp GGAGATTCCTTTAGACACGTTGTACCCGTATGCGGCATAGGCAGCTaGAGAGGCCGCTGCAGCCCCGGCTTTGGCTCCTGCCATTGCAGC +
Preference number: 1 (lower is better)
Translates to: GDSFRHVVPVCGIGS*RGRCSPGFGSCHCS
Trigger: GCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAAGGAATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 90 bp CAGATGAGCCGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGCTGGTCCACAGTGGGGTTCCAGTCG +
Preference number: 1 (lower is better)
Translates to: QMSRYTVTCFVCPKR*ALSMACWSTVGFQS
Trigger: CGACTGGAACCCCACTGTGGACCAGCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGGCAGGGACAGGCAGAAACACCTCCC +
Preference number: 1 (lower is better)
Translates to: DFQVCKSEACPPGGT*STRDIRQGQAETPP
Trigger: GGGAGGTGTTTCTGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 90 bp AGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGGCCCAGATaGTTACCGTCCTCCAGAGGGGTTGGTGCCTTTGCCCTGTTTCCG +
Preference number: 1 (lower is better)
Translates to: RTLALVWLKEVGGPR*LPSSRGVGAFALFP
Trigger: CGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 90 bp GCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTaGGAGTCCCCTGGGTGGAAGGTGCTACGGTTGCTGGTAGGATCT +
Preference number: 1 (lower is better)
Translates to: AVLLIEVAPGLSTGF*ESPGWKVLRLLVGS
Trigger: AGATCCTACCAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR TCA 90 bp GAGACGGAGCCTGTTATGGATGCGGGAGAGTTGGTAGCTCGAGACTaGGGGGCTGAGGAGGCTGGGTCATCCACAATGACCAGCATGTCA +
Preference number: 1 (lower is better)
Translates to: ETEPVMDAGELVARD*GAEEAGSSTMTSMS
Trigger: TGACATGCTGGTCATTGTGGATGACCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAACTCTCCCGCATCCATAACAGGCTCCGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp ATGGTGCCTTTACAGATGAGCCGGTACACAGTAACCTGCTTTGTCTaGCCTAAGCGGTGGGCCCTGTCCATGGCCTGCTGGTCCACAGTG +
Preference number: 1 (lower is better)
Translates to: MVPLQMSRYTVTCFV*PKRWALSMACWSTV
Trigger: CACTGTGGACCAGCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CCA 90 bp GAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTaGAAGGTGCTACGGTTGCTGGTAGGATCTGAAGGTTCTCTTGGT +
Preference number: 1 (lower is better)
Translates to: EVAPGLSTGFWESPG*KVLRLLVGSEGSLG
Trigger: ACCAAGAGAACCTTCAGATCCTACCAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp ATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTaGCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGA +
Preference number: 1 (lower is better)
Translates to: IETQFRDFQVCKSEA*PPGGTCSTRDIRQG
Trigger: TCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp ACCAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATG +
Preference number: 1 (lower is better)
Translates to: TSMSLLLSSRGMEPV*SSLLMEISLKGLGM
Trigger: CATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 90 bp GAAGGTCCAAAGTCAGCAAGGCCAGCAGGCCGAACAAGGGATGTCTaGAGAGGACTGCTGGCGGAGATTCCTTTAGACACGTTGTACCCG +
Preference number: 1 (lower is better)
Translates to: EGPKSARPAGRTRDV*RGLLAEIPLDTLYP
Trigger: CGGGTACAACGTGTCTAAAGGAATCTCCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCGGCCTGCTGGCCTTGCTGACTTTGGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 90 bp CTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTaGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGA +
Preference number: 1 (lower is better)
Translates to: LRMQDAARGKPSKDH*QVRTLALVWLKEVG
Trigger: TCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTaGGAGTCCCCTGGGTGGAAGGTGCTACGGTTGCTGGTAGGATCT +
Preference number: 1 (lower is better)
Translates to: QTLLIEVAPGLSTGF*ESPGWKVLRLLVGS
Trigger: AGATCCTACCAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401393.7
3UTR CCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGGCCCAGATGGTTACCGTCCTCCAGA +
Preference number: 1 (lower is better)
Translates to: KPSKDHWQVRTLALV*LKEVGGPRWLPSSR
Trigger: TCTGGAGGACGGTAACCATCTGGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR TCA 90 bp ACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTGTGTCAGGCTTGCCCCGTGAGAGGT +
Preference number: 1 (lower is better)
Translates to: TCQSRRVESGWKQYA*ASKGGLCQACPVRG
Trigger: ACCTCTCACGGGGCAAGCCTGACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp TTCCCCTGCTGGACATTTCCACTTCTGACTCAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCT +
Preference number: 1 (lower is better)
Translates to: FPCWTFPLLTQDARC*TGQAIQRPLAGQDS
Trigger: AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCCAGCAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp TCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTaGCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCAACTCT +
Preference number: 1 (lower is better)
Translates to: SRFRLRSFTRLVSSC*RFSSCRSLSFFSNS
Trigger: AGAGTTGGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CCA 90 bp CAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTaGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTC +
Preference number: 1 (lower is better)
Translates to: QHLRRLCKGRVRAEE*NRDGNSMPEHLKGV
Trigger: GACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR TCA 90 bp ATGAGGCTCTCCTTGCCTGGAATCCTGATGAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGACCTCCAGCTGGCTCTGGGAAGAAC +
Preference number: 1 (lower is better)
Translates to: MRLSLPGILMKDQPF*GLMLHRPPAGSGKN
Trigger: GTTCTTCCCAGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTTCATCAGGATTCCAGGCAAGGAGAGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR GCA 90 bp TGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCTACAGGCA +
Preference number: 1 (lower is better)
Translates to: CPVRGLRLGYTVHLR*SGADPCPVAFLLQA
Trigger: TGCCTGTAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp GTCTGCAGCCAGTTCAGGGGCCCCATTCAACAAACACTGCTTGGCTaGCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTGC +
Preference number: 1 (lower is better)
Translates to: VCSQFRGPIQQTLLG*QTPSFLQNSPFIFC
Trigger: GCAGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR GCA 90 bp TTTAGCCAGTCTGCAGCCAGTTCAGGGGCCCCATTCAACAAACACTaGTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCA +
Preference number: 1 (lower is better)
Translates to: FSQSAASSGAPFNKH*LAARLPPSFRTRLS
Trigger: TGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGCAGACTGGCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR GCA 90 bp TGGTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTaGTGGTCATGTGGAGGTTCTTGGGATTCCCAGGAACATTATTTC +
Preference number: 1 (lower is better)
Translates to: WCLCPVSGPESLGLG*WSCGGSWDSQEHYF
Trigger: GAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 90 bp GCCAGTCTGCAGCCAGTTCAGGGGCCCCATTCAACAAACACTGCTTaGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATT +
Preference number: 1 (lower is better)
Translates to: ASLQPVQGPHSTNTA*LPDSLLPSELAFHI
Trigger: AATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGCAGACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR CCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTT +
Preference number: 1 (lower is better)
Translates to: SLHTFPASACALSLG*FPPVAVSLPAAASV
Trigger: AACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CCA 90 bp TGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTaGTCATGTGGAGGTTCTTGGGATTCCCAGGAACATTATTTCCCT +
Preference number: 1 (lower is better)
Translates to: CLCPVSGPESLGLGC*SCGGSWDSQEHYFP
Trigger: AGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR TCA 90 bp CAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATGGCTaGGTCCACGCTAATGAAGGAGTCATCTCCGTCAGCAGAGAGGTT +
Preference number: 1 (lower is better)
Translates to: QLTADGDLTERAWHG*VHANEGVISVSREV
Trigger: AACCTCTCTGCTGACGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 90 bp GAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAAC +
Preference number: 1 (lower is better)
Translates to: EISTMEGSSQHLRRL*KGRVRAEEWNRDGN
Trigger: GTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 90 bp GGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTGGAGGTTCTTaGGATTCCCAGGAACATTATTTCCCTTGCTCAAAGGGGAACTCA +
Preference number: 1 (lower is better)
Translates to: GPESLGLGCWSCGGS*DSQEHYFPCSKGNS
Trigger: TGAGTTCCCCTTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 90 bp CCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTaGAGGTTCTTGGGATTCCCAGGAACATTATTTCCCTTGCTCAAA +
Preference number: 1 (lower is better)
Translates to: PCFRTRESGARLLVM*RFLGFPGTLFPLLK
Trigger: TTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 90 bp GCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTaGCTGAAGACTGTGGACAACAGGTATACAATCTCCCTTACTAGC +
Preference number: 1 (lower is better)
Translates to: ALSNDDTLGFRDLGS*LKTVDNRYTISLTS
Trigger: GCTAGTAAGGGAGATTGTATACCTGTTGTCCACAGTCTTCAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR TCA 90 bp TCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTaGAGACTGTGGACAACAGGTATACAATCTCCCTTACTAGCCCTA +
Preference number: 1 (lower is better)
Translates to: SPMMTLWGSETWGAA*RLWTTGIQSPLLAL
Trigger: TAGGGCTAGTAAGGGAGATTGTATACCTGTTGTCCACAGTCTTCAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp GGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTaGACTTCGGTCATTGCAGTAAGAATCCAATGGCACTGCGGTAAC +
Preference number: 1 (lower is better)
Translates to: GCQTPSFLQNSPFIF*TSVIAVRIQWHCGN
Trigger: GTTACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCAGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR CCA 90 bp TTGCTGGTAGGATCTGAAGGTTCTCTTGGTGTGAACCATGCAGGATaGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGACTTCCT +
Preference number: 1 (lower is better)
Translates to: LLVGSEGSLGVNHAG*EELLGTQLPVDRLP
Trigger: AGGAAGTCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCACACCAAGAGAACCTTCAGATCCTACCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp TTTAAAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTaGAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGG +
Preference number: 1 (lower is better)
Translates to: FKNQSIETQFRDFQV*KSEACPPGGTCSTR
Trigger: CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 90 bp TGGTCATGTGGAGGTTCTTGGGATTCCCAGGAACATTATTTCCCTTaGTCAAAGGGGAACTCAAAGGAGAAGAGGCGCTTGAAGGTCCAA +
Preference number: 1 (lower is better)
Translates to: WSCGGSWDSQEHYFP*SKGNSKEKRRLKVQ
Trigger: TTGGACCTTCAAGCGCCTCTTCTCCTTTGAGTTCCCCTTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR TCA 90 bp GTTCTGAAAATCAGCAACCATGTCTCGCCTCTCCGAGATCTTGGATaGGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTA +
Preference number: 1 (lower is better)
Translates to: VLKISNHVSPLRDLG*AIKPHVGMLPVNHV
Trigger: TACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCGAGACATGGTTGCTGATTTTCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
3UTR TCA 90 bp AACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAATCTCACTCTTCTCCTTGGCTCTTTG +
Preference number: 1 (lower is better)
Translates to: NHLFGFQGIWFEVPT*NHHPLNLTLLLGSL
Trigger: CAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR TCA 90 bp GAAGACTGCAATAAATCCTCAATGGAAATTTTGTTCTTTAGTGCCTaGTATAGCAGCTTCTGTCGGCTGGTCAGTTGGCAATACATTAGA +
Preference number: 1 (lower is better)
Translates to: EDCNKSSMEILFFSA*YSSFCRLVSWQYIR
Trigger: TCTAATGTATTGCCAACTGACCAGCCGACAGAAGCTGCTATATCAGGCACTAAAGAACAAAATTTCCATTGAGGATTTATTGCAGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR CAA 90 bp AGGCAGCTGCAGAGGCCGCTGCAGCCCCGGCTTTGGCTCCTGCCATaGCAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: RQLQRPLQPRLWLLP*QQHCLPWTFGSGPS
Trigger: GGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGCAGCACTGCCTGCCGTaGACTTTCGGCTCCGGCCCT +
Preference number: 2 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEQHCLP*TFGSGP
Trigger: AGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTG...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CAA 90 bp GCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTaGGCTGTGCTTCCTGAACCTTTGGGGCGGCCTCGGCTTCGGGCT +
Preference number: 2 (lower is better)
Translates to: ALPAVDFRLRPFPAP*AVLPEPLGRPRLRA
Trigger: AGCCCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp CTGAACCTTTGGGGCGGCCTCGGCTTCGGGCTGAGTGACCACGTCCTGCAGCTGGGTGGGCCCTGTCCATaGCCTGCTGGTCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: LNLWGGLGFGLSDHVLQLGGPCP*PAGPQW
Trigger: CCACTGTGGACCAGCAGGCCATGGACAGGGCCCACC...CAGCTGCAGGACGTGGTCACTCAGCCCGAAGCCGAGGCCGCCCCAAAGGTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCAGGGCAAAGGGGACTCTaGAAGAGGGGCAGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAGQRGL*KRGSEA
Trigger: AGCCTCACTGCCCCTCTTGCAGAGTCCCCTTTGCCC...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGCCTCGGCTTCGGGCTaGGTGACCACGTCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRASASG*VTTSCS
Trigger: GCTGCAGGACGTGGTCACTCAGCCCGAAGCCGAGGC...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGAGTGGGGCTGATCCATaGCCTGTGGCCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: LPLCLYWRAASSGWPGWESGADP*PVAFLL
Trigger: TAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACT...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGAGTCTGGGGCTAGGCTaGTGGTCATGTGGAGGTTCT +
Preference number: 2 (lower is better)
Translates to: LPLCLYWRAASSGWPGWESLGLG*WSCGGS
Trigger: AGAACCTCCACATGACCAGCAGCCTAGCCCCAGACT...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGAGATGCAGTGGGGCTaGTCCATGCCCTGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQEMQWG*SMPCGL
Trigger: AAGGCCACAGGGCATGGATCAGCCCCACTGCATCTC...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCAAAGGTTCTCTTGGTGTaGACCATGCAGGATGGGAGG +
Preference number: 2 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAKVLLV*TMQDGR
Trigger: CCTCCCATCCTGCATGGTTCACACCAAGAGAACCTT...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCATGCCTGTCCTTCCCCTaGTGGACATTTCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQACLSFP*WTFPLL
Trigger: CAGAAGTGGAAATGTCCAGCAGGGGAAGGACAGGCA...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGTGGGAGTCCCCTGGGTaGAAGGTGCTACGGTTGCTG +
Preference number: 2 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQWESPG*KVLRLL
Trigger: CAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCA...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCATGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAWKQYA*ASKGGL
Trigger: CAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCA...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCCCATGCAAACACTGCTaGTTGAGGTGGCTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGPCKHC*LRWLLV
Trigger: GACCAGGAGCCACCTCAATCAGCAGTGTTTGCATGG...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
3UTR-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACAGCTCTTCACAGCACCTaGGGAGACTTTGCAAGGGAC +
Preference number: 2 (lower is better)
Translates to: RCANQRLARPEVPAPPGTALHST*GDFARD
Trigger: GTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGTCTTGGTGTGAACCATaGAGGATGGGAGGAATTGCT +
Preference number: 2 (lower is better)
Translates to: LPLCLYWRAASSGWPGWESWCEP*RMGGIA
Trigger: AGCAATTCCTCCCATCCTGCATGGTTCACACCAAGA...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGG +
Preference number: 2 (lower is better)
Translates to: LNSAIFRCANQRLARPEVPPGGT*STRDIR
Trigger: CCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGG...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGTGCGGCATAGGCAGCTaGAGAGGCCGCTGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: SLKGLGMAESTLMKESSPCGIGS*RGRCSP
Trigger: GGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCA...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGCTGATCCATGCCCTGTaGCCTTCCTCCTACAGGCAC +
Preference number: 2 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRLIHAL*PSSYRH
Trigger: GTGCCTGTAGGAGGAAGGCCACAGGGCATGGATCAG...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp AGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATGGCTGAGTCCACGGGTGGGCCCTGTCCATaGCCTGCTGGTCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: SSLLMEISLKGLGMAESTGGPCP*PAGPQW
Trigger: CCACTGTGGACCAGCAGGCCATGGACAGGGCCCACC...CGTGGACTCAGCCATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CAA 90 bp CCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTaGAAGGAAGTCGGAGGGCCCAGATGGTTACCGTCCTCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: PSKDHWQVRTLALVW*KEVGGPRWLPSSRG
Trigger: CCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGGAGATGCAGTGGGGCTaGTCCATGCCCTGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLEMQWG*SMPCGL
Trigger: AAGGCCACAGGGCATGGATCAGCCCCACTGCATCTC...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGCTCACACCATCCACCTaGCTGTCCTTCCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLLTPST*LSFPCW
Trigger: CCAGCAGGGGAAGGACAGGCAGGTGGATGGTGTGAG...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TTTAGACACGTTGTACCCGTATGCGGCATAGGCAGCTGCAGAGGCCGCTGCAGCCACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: FRHVVPVCGIGSCRGRCSHLRRL*KGRVRA
Trigger: GGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTG...GCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTAGCTGCAGAGGCCGCTaGAGCCCCGGCTTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: SLHTFPASACALSLGWFPSCRGR*SPGFGS
Trigger: GGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCT...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGCTCCAGAGGGGTTGGTaGCTTTGCCCTGTTTCCGGA +
Preference number: 2 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKLQRGW*LCPVSG
Trigger: TCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAG...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGCTGTCCATGGCCTGCTaGTCCACAGTGGGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: TAPAETLQGTCQSRRVESLSMAC*STVGFQ
Trigger: CTGGAACCCCACTGTGGACCAGCAGGCCATGGACAG...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGC +
Preference number: 2 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLVCPKR*ALSMAC
Trigger: GCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGAC...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CAA 90 bp CAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGGGCCCAGATGGTTACCGTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QAIQRPLAGQDSSPG*VEGSRRAQMVTVLQ
Trigger: CTGGAGGACGGTAACCATCTGGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCACCCTTACTAGCCCTATaGGAAATCACACTCTTAAGA +
Preference number: 2 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAPLLAL*EITLLR
Trigger: TCTTAAGAGTGTGATTTCTCATAGGGCTAGTAAGGG...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGCCCTTACTAGCCCTATaGGAAATCACACTCTTAAGA +
Preference number: 2 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEPLLAL*EITLLR
Trigger: TCTTAAGAGTGTGATTTCTCATAGGGCTAGTAAGGG...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGGGCTTGGCATTTTTCTaGTTCCCTCTAAATAGCATC +
Preference number: 2 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEGLAFF*FPLNSI
Trigger: GATGCTATTTAGAGGGAATCAGAAAAATGCCAAGCC...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGTCCATTCACGGTATCTaGGACGGAGCCTGTTATGGA +
Preference number: 2 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQSIHGI*DGACYG
Trigger: TCCATAACAGGCTCCGTCTCAGATACCGTGAATGGA...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCCAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAA +
Preference number: 2 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCQDARC*TGQAIQ
Trigger: TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTG...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp GTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGACTTCTGACTCAGGATaGAAGATGCTGCACGGGGCA +
Preference number: 2 (lower is better)
Translates to: VPLPCFRTRESGARLLVMTSDSG*KMLHGA
Trigger: TGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGT...CATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTAGTGGGGCTGATCCATaGCCTGTGGCCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSSGADP*PVAFLL
Trigger: TAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACT...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGG +
Preference number: 2 (lower is better)
Translates to: SLHTFPASACALSLGWFPPPGGT*STRDIR
Trigger: CCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGG...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTTTCCCGCTTCCGCTTaGGCTCTTTCACTCGGTTGG +
Preference number: 2 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWEFPASA*ALSLGW
Trigger: CCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAA...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTATGGGAGTCCCCTGGGTaGAAGGTGCTACGGTTGCTG +
Preference number: 2 (lower is better)
Translates to: LNSAIFRCANQRLARPEVWESPG*KVLRLL
Trigger: CAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCA...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACTTCTGGGAGTCCCCTaGGTGGAAGGTGCTACGGTT +
Preference number: 2 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLLLGVP*VEGATV
Trigger: AACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 90 bp TATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTaGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: YRNSIPRFSGVQIRG*PARRYLLHQGHQAG
Trigger: CCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCGCTATACAGTTCACTTaGGATGCAGTGGGGCTGATC +
Preference number: 2 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSAIQFT*DAVGLI
Trigger: GATCAGCCCCACTGCATCTCAAGTGAACTGTATAGC...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAACTCAGGATGCAAGATaGTGCACGGGGCAAGCCATC +
Preference number: 2 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLTQDAR*CTGQAI
Trigger: GATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGT...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCTTGGTGTGAACCATaGAGGATGGGAGGAATTGCT +
Preference number: 2 (lower is better)
Translates to: RCANQRLARPEVPAPPGTSWCEP*RMGGIA
Trigger: AGCAATTCCTCCCATCCTGCATGGTTCACACCAAGA...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCCCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGG +
Preference number: 2 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTPPGGT*STRDIR
Trigger: CCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGG...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGCCCGGCTTTGGCTCCTaGCATTGCAGCAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGPGFGS*HCSSTA
Trigger: GGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGG...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGCCATCCAAAGACCACTaGCAGGTCAGGACTCTAGCC +
Preference number: 2 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRPSKDH*QVRTLA
Trigger: GGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGG...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACAGAGAAATCTCTACCATaGAAGGCTCTTCACAGCACC +
Preference number: 2 (lower is better)
Translates to: RCANQRLARPEVPAPPGTEKSLP*KALHST
Trigger: GGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTC...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCGATGGGAGGAATTGCTaGGAACACAACTGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTDGRNC*EHNCLW
Trigger: CCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATC...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCTTCTGGGAGTCCCCTaGGTGGAAGGTGCTACGGTT +
Preference number: 2 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCLLGVP*VEGATV
Trigger: AACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTGCAGCTCACTGCCTCTCCGAGATCTTaGATGAGCCATCAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: QHVTAALVQGNGASVQLTASPRS*MSHQAS
Trigger: TGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGC...AGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCACTGGCATTTCCTGAATaGAAATTCCATTCACGGTAT +
Preference number: 2 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQALAFPE*KFHSRY
Trigger: ATACCGTGAATGGAATTTCCATTCAGGAAATGCCAG...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp GATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCCTCAGGTATCTCTGGTaGCTCTCCCCTTCTGGCGCT +
Preference number: 2 (lower is better)
Translates to: DKDPMPLRLEPSQQDIKGLRYLW*LSPSGA
Trigger: AGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAG...GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR CAA 90 bp CTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGGTGCTACGGTaGCTGGTAGGATCTGAAGGTTCTCTTGGTGTGAACCATGCAGGA +
Preference number: 2 (lower is better)
Translates to: LSTGFWESPGWKVLR*LVGSEGSLGVNHAG
Trigger: TCCTGCATGGTTCACACCAAGAGAACCTTCAGATCCTACCAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGTGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKWKQYA*ASKGGL
Trigger: CAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCA...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCAGGACCCTATGCCCTTaGGACTTGAGCCGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSRTLCP*DLSRVS
Trigger: GCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCT...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR TCA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCTTGGTAGCTCGAGACTaGGGGGCTGAGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFLVARD*GAEEAG
Trigger: CCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAA...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR GCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGC +
Preference number: 2 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCTVHLR*SGADPC
Trigger: GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGT...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGGGTCTGTGTCAGGCTTaGCCCGTGAGAGGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRGLCQA*PVRGLR
Trigger: TCTTAAACCTCTCACGGGGCAAGCCTGACACAGACC...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGACACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGHLRRL*KGRVRA
Trigger: GGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTG...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRHLRRL*KGRVRA
Trigger: GGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TTTAGACACGTTGTACCCGTATGCGGCATAGGCAGCTGCAGAGGCCGCTGCAGCTGCTGGGAACACAACTaGCTGTGGATAGACTTCCTC +
Preference number: 2 (lower is better)
Translates to: FRHVVPVCGIGSCRGRCSCWEHN*LWIDFL
Trigger: GAGGAAGTCTATCCACAGGCAGTTGTGTTCCCAGCA...GCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGTGCTGGGAACACAACTaGCTGTGGATAGACTTCCTC +
Preference number: 2 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKCWEHN*LWIDFL
Trigger: GAGGAAGTCTATCCACAGGCAGTTGTGTTCCCAGCA...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGATGCAAATCAGAGGCTTaGCCGCCCGGAGGTACCTGC +
Preference number: 2 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRCKSEA*PPGGTC
Trigger: GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCA...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGCGGTACACAGTAACCTaGTTTGTCTGCCCTAAGCGG +
Preference number: 2 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRRYTVT*FVCPKR
Trigger: CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCG...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCCCAGCATGTCACTGCTaGTCTCGTCCAGGGGAATGG +
Preference number: 2 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSPACHC*SRPGEW
Trigger: CCATTCCCCTGGACGAGAGCAGCAGTGACATGCTGG...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR CCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRTLALV*LKEVGG
Trigger: CCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGT...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGACTTCTGGGAGTCCCCTaGGTGGAAGGTGCTACGGTT +
Preference number: 2 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGLLGVP*VEGATV
Trigger: AACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAG...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTGCAGCTCACTGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTT +
Preference number: 2 (lower is better)
Translates to: QHVTAALVQGNGASVQLTALSLG*FPPVAV
Trigger: AACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGC...AGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CAA 90 bp CAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTaGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: QACPVRGLRLGYTVH*RCSGADPCPVAFLL
Trigger: TAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 90 bp AGCCAGTCTGCAGCCAGTTCAGGGGCCCCATTCAACAAACACTGCTaGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATAT +
Preference number: 2 (lower is better)
Translates to: SQSAASSGAPFNKHC*AARLPPSFRTRLSY
Trigger: ATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGCAGACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR CAA 90 bp TTCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTaGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: FSAYFSRFRLRSFTR*VSSCCRFSSCRSLS
Trigger: ACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CAA 90 bp CGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTGGAGGTTCTaGGGATTCCCAGGAACATTATTTCCCTTGCTCAAAGGGGAACTC +
Preference number: 2 (lower is better)
Translates to: RTRESGARLLVMWRF*GFPGTLFPLLKGEL
Trigger: GAGTTCCCCTTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGGGACATTTCCACTTCTaGCTCAGGATGCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWEGHFHF*LRMQDA
Trigger: AGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCC...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAAT +
Preference number: 2 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRFEVPT*NHHPLN
Trigger: ATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAA...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGACTCAGGATGCAAGATaGTGCACGGGGCAAGCCATC +
Preference number: 2 (lower is better)
Translates to: SLKGLGMAESTLMKESSPTQDAR*CTGQAI
Trigger: GATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGT...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATCTCACACCATCCACCTaGCTGTCCTTCCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYLTPST*LSFPCW
Trigger: CCAGCAGGGGAAGGACAGGCAGGTGGATGGTGTGAG...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTGTAACCTGCTTTGTCTaGCCTAAGCGGTGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: SLHTFPASACALSLGWFPVTCFV*PKRWAL
Trigger: CAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTAC...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR GCA 90 bp TTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCGTAACCTGCTTTGTCTaGCCTAAGCGGTGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: LRLEPSQQDIKGIQLSTVVTCFV*PKRWAL
Trigger: CAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTAC...GACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESTLALV*LKEVGG
Trigger: CCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGT...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
3UTR-3UTR CCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCCTGATCCATGCCCTGTaGCCTTCCTCCTACAGGCAC +
Preference number: 2 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVLIHAL*PSSYRH
Trigger: GTGCCTGTAGGAGGAAGGCCACAGGGCATGGATCAG...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACCTGATCCATGCCCTGTaGCCTTCCTCCTACAGGCAC +
Preference number: 2 (lower is better)
Translates to: ISVSREVGVISRGNKWDHLIHAL*PSSYRH
Trigger: GTGCCTGTAGGAGGAAGGCCACAGGGCATGGATCAG...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGAGAGGTTTAAGACTTaGCTATACAGTTCACTTGAG +
Preference number: 2 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGERFKT*LYSSLE
Trigger: CTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGTCCTGGTCTCTCTACTaGCTTCTGGGAGTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGSWSLY*LLGVPW
Trigger: CCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGA...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGATCCTGGTCTCTCTACTaGCTTCTGGGAGTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRSWSLY*LLGVPW
Trigger: CCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGA...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp AAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCTCCGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGC +
Preference number: 2 (lower is better)
Translates to: KLTPRRKSLFLRYLWWLSVCPKR*ALSMAC
Trigger: GCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGAC...GGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR TCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGACATTTCCACTTCTaGCTCAGGATGCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: IFRCANQRLARPEVPAPPGHFHF*LRMQDA
Trigger: AGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCC...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGGCAAACACTGCTGATTaGGGTGGCTCCTGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGANTAD*GGSWSL
Trigger: GAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTGC...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401393.7
3UTR-3UTR TCA 90 bp GATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: DKDPMPLRLEPSQQDIKGKDQPF*GLMLHR
Trigger: TCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTT...GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR TCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTTATGCCCTTGAGACTTaGGCCGAGTCAGCAGGACAT +
Preference number: 2 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLYALET*AESAGH
Trigger: ATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATA...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR GCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAA +
Preference number: 2 (lower is better)
Translates to: APDETQMIKVLTPSTCLSQDARC*TGQAIQ
Trigger: TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGCAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAA +
Preference number: 2 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGQDARC*TGQAIQ
Trigger: TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTG...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATAGTGGGGCTGATCCATaGCCTGTGGCCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYSGADP*PVAFLL
Trigger: TAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACT...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGGTCTGTGTCAGGCTTaGCCCGTGAGAGGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRGLCQA*PVRGLR
Trigger: TCTTAAACCTCTCACGGGGCAAGCCTGACACAGACC...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCCCATCCAAAGACCACTaGCAGGTCAGGACTCTAGCC +
Preference number: 2 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVPSKDH*QVRTLA
Trigger: GGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGG...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTGTCAGAGCCGAAGAGTaGAATCGGGATGGAAACAGT +
Preference number: 2 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCVRAEE*NRDGNS
Trigger: ACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGAC...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGAGAAATCTCTACCATaGAAGGCTCTTCACAGCACC +
Preference number: 2 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLEKSLP*KALHST
Trigger: GGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTC...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTAGGCTGCTGGTCATGTaGAGGTTCTTGGGATTCCCA +
Preference number: 2 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLRLLVM*RFLGFP
Trigger: TGGGAATCCCAAGAACCTCCACATGACCAGCAGCCT...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CAA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAA +
Preference number: 2 (lower is better)
Translates to: RNLYHGRLFTAPAET*QGTCQSRRVESGWK
Trigger: TTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 90 bp GCTGAGTCCACGCTAATGAAGGAGTCATCTCCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGAACAAATGGGATCACCAGGTTCACA +
Preference number: 2 (lower is better)
Translates to: AESTLMKESSPSAER*ELSAEGTNGITRFT
Trigger: TGTGAACCTGGTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGATGACTCCTTCATTAGCGTGGACTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR TCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCTTGGTAGCTCGAGACTaGGGGGCTGAGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTLVARD*GAEEAG
Trigger: CCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAA...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACTTCTGACTCAGGATaGAAGATGCTGCACGGGGCA +
Preference number: 2 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGTSDSG*KMLHGA
Trigger: TGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGT...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCTGCCTGTCCTTCCCCTaGTGGACATTTCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVCLSFP*WTFPLL
Trigger: CAGAAGTGGAAATGTCCAGCAGGGGAAGGACAGGCA...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGC +
Preference number: 2 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGTVHLR*SGADPC
Trigger: GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGT...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TTCGGGCTGAGTGACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATCAGGATGGGAGGAATTaGTGGGAACACAACTGCCTG +
Preference number: 2 (lower is better)
Translates to: FGLSDHVLQLAFPEWKFHQDGRN*WEHNCL
Trigger: CAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTG...ATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTCACTCAGCCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp GGGGCCCCATTCAACAAACACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGACTGCACTTCGGTCATTaGAGTAAGAATCCAATGGCA +
Preference number: 2 (lower is better)
Translates to: GAPFNKHCLAARLPPSFRLHFGH*SKNPMA
Trigger: TGCCATTGGATTCTTACTGCAATGACCGAAGTGCAG...TCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR GCA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCCCATTCAACAAACACTaGTTGGCTGCCAGACTCCCT +
Preference number: 2 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSPFNKH*LAARLP
Trigger: AGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGG...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR GCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGTGGCTCTTTGCAGAATaGGTTCTTCAATGGTGCCTT +
Preference number: 2 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRWLFAE*VLQWCL
Trigger: AAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCA...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp TTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCTGCCGTTTCTCTTCCTaGCGCAGCCTCAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LRLEPSQQDIKGIQLSTVCRFSS*RSLSFF
Trigger: GAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCA...GACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCCACGTTGTACCCGTATaGGGCATAGGCAGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTHVVPV*GIGSCR
Trigger: TCTGCAGCTGCCTATGCCGCATACGGGTACAACGTG...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTAGAGAAATCTCTACCATaGAAGGCTCTTCACAGCACC +
Preference number: 2 (lower is better)
Translates to: LNSAIFRCANQRLARPEVEKSLP*KALHST
Trigger: GGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTC...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGTGAACCATGCAGGATaGGAGGAATTGCTGGGAACA +
Preference number: 2 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGVNHAG*EELLGT
Trigger: TGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCTCAACAAACACTGCTTaGCTGCCAGACTCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSSTNTA*LPDSLL
Trigger: AAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGA...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR CAA 90 bp GTCTATCATCCTGGTCATCTGGGAGTAGATAAGGACCCTATGCCCTaGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTT +
Preference number: 2 (lower is better)
Translates to: VYHPGHLGVDKDPMP*RLEPSQQDIKGIQL
Trigger: AAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATCTACTCCCAGATGACCAGGATGATAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
3UTR-3UTR TCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGAGCTATACAGTTCACTTaGGATGCAGTGGGGCTGATC +
Preference number: 2 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRAIQFT*DAVGLI
Trigger: GATCAGCCCCACTGCATCTCAAGTGAACTGTATAGC...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGTGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGWKQYA*ASKGGL
Trigger: CAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCA...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp TTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTTTGTTCTTTAGTGCCTaGTATAGCAGCTTCTGTCGG +
Preference number: 2 (lower is better)
Translates to: FPLPLALFHSVGFLLLPFLFFSA*YSSFCR
Trigger: CCGACAGAAGCTGCTATATCAGGCACTAAAGAACAA...AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR GCA 90 bp GAAATTCCATTCACGGTATCTGAGACGGAGCCTGTTATGGATGCGGGAGAGTTGTGCCTGTCCTTCCCCTaGTGGACATTTCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: EIPFTVSETEPVMDAGELCLSFP*WTFPLL
Trigger: CAGAAGTGGAAATGTCCAGCAGGGGAAGGACAGGCA...CAACTCTCCCGCATCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp GGGGCCCCATTCAACAAACACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGATCGCCTTTCATATTCTaGACTTCGGTCATTGCAGTA +
Preference number: 2 (lower is better)
Translates to: GAPFNKHCLAARLPPSFRSPFIF*TSVIAV
Trigger: TACTGCAATGACCGAAGTGCAGAATATGAAAGGCGA...TCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR GCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGGAAAATCACTGTGTCTaGAGCAGTGAGATTGATACC +
Preference number: 2 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLENHCV*SSEIDT
Trigger: GGTATCAATCTCACTGCTGCAGACACAGTGATTTTC...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp GAAATTCCATTCACGGTATCTGAGACGGAGCCTGTTATGGATGCGGGAGAGTTGTTGGTTTCCTCCTGTTaGCGTTTCTCTTCCTGCCGC +
Preference number: 2 (lower is better)
Translates to: EIPFTVSETEPVMDAGELLVSSC*RFSSCR
Trigger: GCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA...CAACTCTCCCGCATCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp GAAATTCCATTCACGGTATCTGAGACGGAGCCTGTTATGGATGCGGGAGAGTTGACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: EIPFTVSETEPVMDAGELTLALV*LKEVGG
Trigger: CCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGT...CAACTCTCCCGCATCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCGAGAGGTTTAAGACTTaGCTATACAGTTCACTTGAG +
Preference number: 2 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTERFKT*LYSSLE
Trigger: CTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTC...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGAGTCAGAGCCGAAGAGTaGAATCGGGATGGAAACAGT +
Preference number: 2 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRVRAEE*NRDGNS
Trigger: ACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGAC...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCGATGGGAGGAATTGCTaGGAACACAACTGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTDGRNC*EHNCLW
Trigger: CCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATC...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCCGTCAGCAGAGAGGTTaGAGTTATCAGCCGAGGGAA +
Preference number: 2 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFRQQRG*SYQPRE
Trigger: TTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACG...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CAA 90 bp CTGGTCATGTGGAGGTTCTTGGGATTCCCAGGAACATTATTTCCCTaGCTCAAAGGGGAACTCAAAGGAGAAGAGGCGCTTGAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: LVMWRFLGFPGTLFP*LKGELKGEEALEGP
Trigger: TGGACCTTCAAGCGCCTCTTCTCCTTTGAGTTCCCCTTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp GACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTGGCTATACAGTTCACTTaGGATGCAGTGGGGCTGATC +
Preference number: 2 (lower is better)
Translates to: DHVLQLAFPEWKFHSRYLAIQFT*DAVGLI
Trigger: GATCAGCCCCACTGCATCTCAAGTGAACTGTATAGC...CAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCTGGCCAAAAGTCCCTaGAGCATAAGGTTTGCCATT +
Preference number: 2 (lower is better)
Translates to: SLHTFPASACALSLGWFPLAKSP*SIRFAI
Trigger: AATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAG...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR GCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTTGGCTCTTTGCAGAATaGGTTCTTCAATGGTGCCTT +
Preference number: 2 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLWLFAE*VLQWCL
Trigger: AAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCA...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR GCA 90 bp GGAAAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAG +
Preference number: 2 (lower is better)
Translates to: GKLTPRRKSLFLRYLWWLGMEPV*SSLLME
Trigger: CTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC...GAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGAGAGGTTTAAGACTTaGCTATACAGTTCACTTGAG +
Preference number: 2 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSERFKT*LYSSLE
Trigger: CTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTC...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp CGCAGCCTCAGTTTCTTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTT +
Preference number: 2 (lower is better)
Translates to: RSLSFFSNSSSSRRRLTTALSLG*FPPVAV
Trigger: AACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGC...GGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR CCA 90 bp TTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTGATTTGTTTTCGGCATaGCTCTCAATGTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: FPLPLALFHSVGFLLLPFDLFSA*LSMSLE
Trigger: TTCCAAGGACATTGAGAGCCATGCCGAAAACAAATC...AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR TCA 90 bp TTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTATGTCATTCCTGTTCTaGAAATCAGCAACCATGTCT +
Preference number: 2 (lower is better)
Translates to: FPLPLALFHSVGFLLLPFMSFLF*KSATMS
Trigger: AGACATGGTTGCTGATTTTCAGAACAGGAATGACAT...AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR GCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTCTCACACCATCCACCTaGCTGTCCTTCCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: INLSKLNSAIFRCANQRLLTPST*LSFPCW
Trigger: CCAGCAGGGGAAGGACAGGCAGGTGGATGGTGTGAG...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCAGAATCCAATGGCACTaGGGTAACAGGAATACAAAG +
Preference number: 2 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSRIQWH*GNRNTK
Trigger: CTTTGTATTCCTGTTACCGCAGTGCCATTGGATTCT...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR GCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCACACCTTCCTAAACTaGATGACCAGATTCATGAGG +
Preference number: 2 (lower is better)
Translates to: SLHTFPASACALSLGWFPHTFLN*MTRFMR
Trigger: CCTCATGAATCTGGTCATGCAGTTTAGGAAGGTGTG...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp GGAGTAGATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCTGTCGGCTGGTCAGTTaGCAATACATTAGAATCTCA +
Preference number: 2 (lower is better)
Translates to: GVDKDPMPLRLEPSQQDICRLVS*QYIRIS
Trigger: TGAGATTCTAATGTATTGCCAACTGACCAGCCGACA...GATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATCTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCGCAGCTTCTGTCGGCTaGTCAGTTGGCAATACATTA +
Preference number: 2 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFAASVG*SVGNTL
Trigger: TAATGTATTGCCAACTGACCAGCCGACAGAAGCTGC...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACAAAGAGCTAACCATCTaGCCAAAAGTCCCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: ISVSREVGVISRGNKWDHKELTI*PKVPEA
Trigger: TGCTTCAGGGACTTTTGGCCAGATGGTTAGCTCTTT...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR TCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCCCCTTACTAGCCCTATaGGAAATCACACTCTTAAGA +
Preference number: 2 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVPLLAL*EITLLR
Trigger: TCTTAAGAGTGTGATTTCTCATAGGGCTAGTAAGGG...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTACCTGGGGAGCTGCCTaGAGACTGTGGACAACAGGT +
Preference number: 2 (lower is better)
Translates to: INLSKLNSAIFRCANQRLTWGAA*RLWTTG
Trigger: ACCTGTTGTCCACAGTCTTCAGGCAGCTCCCCAGGT...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCGAAAATCACTGTGTCTaGAGCAGTGAGATTGATACC +
Preference number: 2 (lower is better)
Translates to: LRLEPSQQDIKGIQLSTVENHCV*SSEIDT
Trigger: GGTATCAATCTCACTGCTGCAGACACAGTGATTTTC...GACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp CAAACACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATAGGAATACAAAGCAGGTaGATGAAAATTGGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: QTLLGCQTPSFLQNSPFIGIQSR*MKIGSL
Trigger: GAGAGACCCAATTTTCATCCACCTGCTTTGTATTCC...TATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR CCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGATCATGTGGAGGTTCTTaGGATTCCCAGGAACATTAT +
Preference number: 2 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRSCGGS*DSQEHY
Trigger: ATAATGTTCCTGGGAATCCCAAGAACCTCCACATGA...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCAGGGCTTGGCATGGCTaGGTCCACGCTAATGAAGGA +
Preference number: 2 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGRAWHG*VHANEG
Trigger: TCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCT...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCGCTCTTCACAGCACCTaGGGAGACTTTGCAAGGGAC +
Preference number: 2 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGALHST*GDFARD
Trigger: GTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCTGGTCCACAGTaGGGTTCCAGTCGCTATCAT +
Preference number: 2 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAPAGPQ*GSSRYH
Trigger: ATGATAGCGACTGGAACCCCACTGTGGACCAGCAGG...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR TCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTAAGGTTCTCTTGGTGTaGACCATGCAGGATGGGAGG +
Preference number: 2 (lower is better)
Translates to: INLSKLNSAIFRCANQRLKVLLV*TMQDGR
Trigger: CCTCCCATCCTGCATGGTTCACACCAAGAGAACCTT...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTATACAAAGCAGGTGGATaGAAATTGGGTCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SHQASCRYASCKPCIPPVYKAGG*KLGLSP
Trigger: GGGAGAGAGACCCAATTTTCATCCACCTGCTTTGTA...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR CAA 90 bp TTCTTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCTCTTaGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCTGAAATCACC +
Preference number: 2 (lower is better)
Translates to: FFSNSSSSRRRLTTS*GFKVSGLKFPPEIT
Trigger: GGTGATTTCAGGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR TCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGAAGGTTCTCTTGGTGTaGACCATGCAGGATGGGAGG +
Preference number: 2 (lower is better)
Translates to: KINLSKLNSAIFRCANQRKVLLV*TMQDGR
Trigger: CCTCCCATCCTGCATGGTTCACACCAAGAGAACCTT...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR TCA 90 bp TTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCTCTTTGGGTTTCAAGTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAAT +
Preference number: 2 (lower is better)
Translates to: FSNSSSSRRRLTTSLGFKFEVPT*NHHPLN
Trigger: ATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAA...CTTGAAACCCAAAGAGGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGACTTCTGACTCAGGATaGAAGATGCTGCACGGGGCA +
Preference number: 2 (lower is better)
Translates to: KINLSKLNSAIFRCANQRTSDSG*KMLHGA
Trigger: TGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGT...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGC +
Preference number: 2 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGTVHLR*SGADPC
Trigger: GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGT...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGGGTCTGTGTCAGGCTTaGCCCGTGAGAGGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: KINLSKLNSAIFRCANQRGLCQA*PVRGLR
Trigger: TCTTAAACCTCTCACGGGGCAAGCCTGACACAGACC...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGTTCTCCTTGGCTCTTTaGAGAATGCGTTCTTCAATG +
Preference number: 2 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQFSLAL*RMRSSM
Trigger: CATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAA...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR TCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAGGACATTTCCACTTCTaGCTCAGGATGCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAGHFHF*LRMQDA
Trigger: AGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCC...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR GCA 90 bp AAGTCCCTGAAGCATAAGGTTTGCCATTTCTGCTGGAGATATATCAATAAAGCGGTCCTCCAGCTCGTGTaGTTAACAGGAACACAAAGA +
Preference number: 2 (lower is better)
Translates to: KSLKHKVCHFCWRYINKAVLQLV*LTGTQR
Trigger: TCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGAC...CGCTTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR GCA 90 bp CAAAAGTCCCTGAAGCATAAGGTTTGCCATTTCTGCTGGAGATATATCAATAAACGGTACACAGTAACCTaGTTTGTCTGCCCTAAGCGG +
Preference number: 2 (lower is better)
Translates to: QKSLKHKVCHFCWRYINKRYTVT*FVCPKR
Trigger: CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCG...TTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CCA 90 bp CAAAAGTCCCTGAAGCATAAGGTTTGCCATTTCTGCTGGAGATATATCAATAAAAGCCGAGGGAACAAATaGGATCACCAGGTTCACACC +
Preference number: 2 (lower is better)
Translates to: QKSLKHKVCHFCWRYINKSRGNK*DHQVHT
Trigger: GGTGTGAACCTGGTGATCCCATTTGTTCCCTCGGCT...TTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGGTCCTCCAGCTCGTGTaGTTAACAGGAACACAAAGA +
Preference number: 2 (lower is better)
Translates to: KINLSKLNSAIFRCANQRVLQLV*LTGTQR
Trigger: TCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGAC...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTCTCCTTGGCTCTTTaGAGAATGCGTTCTTCAATG +
Preference number: 2 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGFSLAL*RMRSSM
Trigger: CATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAA...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 72 bp CTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTaGGAGGGCCGGTGCCGAGCCTGCCCCCTCTCTCCG +
Preference number: 3 (lower is better)
Translates to: LYWRAASSGWPG*EGRCRACPLSP
Trigger: CGGAGAGAGGGGGCAGGCTCGGCACCGGCCCTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp CCCGGCTTTGGCTCCTGCCATTGCAGCAGCACTGCCTaGCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PGFGSCHCSSTA*RGLSAPALPCS
Trigger: GGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 72 bp CAGCCCCGGCTTTGGCTCCTGCCATTGCAGCAGCACTaGCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: QPRLWLLPLQQH*LPWTFGSGPSL
Trigger: CAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 72 bp AGCTGCAGAGGCCGCTGCAGCCCCGGCTTTGGCTCCTaGCATTGCAGCAGCACTGCCTGCCGTGGACTTTCG +
Preference number: 3 (lower is better)
Translates to: SCRGRCSPGFGS*HCSSTACRGLS
Trigger: CGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 72 bp GTACCCGTATGCGGCATAGGCAGCTGCAGAGGCCGCTaGAGCCCCGGCTTTGGCTCCTGCCATTGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: VPVCGIGSCRGR*SPGFGSCHCSS
Trigger: GCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGGGGTCTGTGTCAGGCTaGCCCCGTGAGAGGTTTAAG +
Preference number: 3 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEGSVSG*PRERFK
Trigger: CTTAAACCTCTCACGGGGCAAGCCTGACACAGACCC...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCAGGGTCTGTGTCAGGCTaGCCCCGTGAGAGGTTTAAG +
Preference number: 3 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAGSVSG*PRERFK
Trigger: CTTAAACCTCTCACGGGGCAAGCCTGACACAGACCC...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGG +
Preference number: 3 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEDSSPG*VEGSRR
Trigger: CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTC...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGTGCAAATCAGAGGCTaGCCCGCCCGGAGGTACCTG +
Preference number: 3 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQVQIRG*PARRYL
Trigger: CAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCAC...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGC +
Preference number: 3 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQAPAET*QGTCQS
Trigger: GCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGC...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp GTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGGCAGGGACAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: VCKSEACPPGGT*STRDIRQGQAE
Trigger: TTCTGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp TTTAGACACGTTGTACCCGTATGCGGCATAGGCAGCTaGAGAGGCCGCTGCAGCCCCGGCTTTGGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: FRHVVPVCGIGS*RGRCSPGFGSC
Trigger: GCAGGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 72 bp GCTGGCGGAGATTCCTTTAGACACGTTGTACCCGTATaGGGCATAGGCAGCTGCAGAGGCCGCTGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: AGGDSFRHVVPV*GIGSCRGRCSP
Trigger: GGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAAGGAATCTCCGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 72 bp AGGGCCCAGATGGTTACCGTCCTCCAGAGGGGTTGGTaGCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: RAQMVTVLQRGW*LCPVSGPESLG
Trigger: CCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 72 bp CGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGCTGGTCCACAGTGGGG +
Preference number: 3 (lower is better)
Translates to: RYTVTCFVCPKR*ALSMACWSTVG
Trigger: CCCCACTGTGGACCAGCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CCA 72 bp CGGAGGGCCCAGATGGTTACCGTCCTCCAGAGGGGTTaGTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: RRAQMVTVLQRG*CLCPVSGPESL
Trigger: CAGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTGGGCCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGC +
Preference number: 3 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRAPAET*QGTCQS
Trigger: GCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGC...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp CAGATGGTTACCGTCCTCCAGAGGGGTTGGTGCCTTTaGCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGC +
Preference number: 3 (lower is better)
Translates to: QMVTVLQRGWCL*PVSGPESLGLG
Trigger: GCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR TCA 72 bp GAGACTGAGGGGCTGAGGAGGCTGGGTCATCCACAATaGCCAGCATGTCACTGCTGCTCTCGTCCAGGGGAA +
Preference number: 3 (lower is better)
Translates to: ETEGLRRLGHPQ*PACHCCSRPGE
Trigger: TTCCCCTGGACGAGAGCAGCAGTGACATGCTGGTCATTGTGGATGACCCAGCCTCCTCAGCCCCTCAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 72 bp GGCAGGGACAGGCAGAAACACCTCCCATGCAAACACTaGCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAG +
Preference number: 3 (lower is better)
Translates to: GRDRQKHLPCKH*PSVSTGGQQAQ
Trigger: CTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAGTGTTTGCATGGGAGGTGTTTCTGCCTGTCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR CCA 72 bp CTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTaGGAGTCCCCTGGGTGGAAGGTGCTACGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: LIEVAPGLSTGF*ESPGWKVLRLL
Trigger: CAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGAGACTAACCACCTCTTaGGGTTTCAAGGTATCTGGT +
Preference number: 3 (lower is better)
Translates to: LPLCLYWRAASSGWPGWERLTTS*GFKVSG
Trigger: ACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCT...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGG +
Preference number: 3 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTDSSPG*VEGSRR
Trigger: CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTC...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp CAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTGCAGCTCACTCGCTCTTTCACTCGGTaGGTTTCCTCCTGTTGCCGT +
Preference number: 3 (lower is better)
Translates to: QHVTAALVQGNGASVQLTRSFTR*VSSCCR
Trigger: ACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCG...AGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR CAA 90 bp CAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTGCAGCTCACTTTTTCCCGCTTCCGCTaGCGCTCTTTCACTCGGTTG +
Preference number: 3 (lower is better)
Translates to: QHVTAALVQGNGASVQLTFSRFR*RSFTRL
Trigger: CAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAA...AGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR CAA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGCCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGA +
Preference number: 3 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRPSAER*ELSAEG
Trigger: TCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGG...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR TCA 72 bp CCTGCCTGTCCTTCCCCTGCTGGACATTTCCACTTCTaGCTCAGGATGCAAGATGCTGCACGGGGCAAGCCA +
Preference number: 3 (lower is better)
Translates to: PACPSPAGHFHF*LRMQDAARGKP
Trigger: TGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCCAGCAGGGGAAGGACAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp CAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTaGCCGCCCGGAGGTACCTGCTCCACCAGGGACATC +
Preference number: 3 (lower is better)
Translates to: QFRDFQVCKSEA*PPGGTCSTRDI
Trigger: GATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 72 bp CCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTaGAAGGTGCTACGGTTGCTGGTAGGATCTGAAGGT +
Preference number: 3 (lower is better)
Translates to: PGLSTGFWESPG*KVLRLLVGSEG
Trigger: ACCTTCAGATCCTACCAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 72 bp CCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTaGCTCTCCCCTTCTGGCGCTCCCCAGGAGCGTAGC +
Preference number: 3 (lower is better)
Translates to: PRRKSLFLRYLW*LSPSGAPQERS
Trigger: GCTACGCTCCTGGGGAGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CAA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGC +
Preference number: 3 (lower is better)
Translates to: SLKGLGMAESTLMKESSPAPAET*QGTCQS
Trigger: GCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGC...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGGTGCAAATCAGAGGCTaGCCCGCCCGGAGGTACCTG +
Preference number: 3 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGVQIRG*PARRYL
Trigger: CAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCAC...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp GAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCTCCCCTTCTGGCGCTCCGCCTCTCCGAGATCTaGGATGAGCCATCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: EGNPCSSGISGGSPLLALRLSEI*DEPSSL
Trigger: GAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCG...GAGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR GCA 72 bp ACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGG +
Preference number: 3 (lower is better)
Translates to: TMEGSSQHLRRL*KGRVRAEEWNR
Trigger: CCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp TCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAGATCTCACTGAAAGGG +
Preference number: 3 (lower is better)
Translates to: SLLLSSRGMEPV*SSLLMEISLKG
Trigger: CCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 72 bp AAGTCAGCAAGGCCAGCAGGCCGAACAAGGGATGTCTaGAGAGGACTGCTGGCGGAGATTCCTTTAGACACG +
Preference number: 3 (lower is better)
Translates to: KSARPAGRTRDV*RGLLAEIPLDT
Trigger: CGTGTCTAAAGGAATCTCCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCGGCCTGCTGGCCTTGCTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 72 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTaGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAG +
Preference number: 3 (lower is better)
Translates to: QDAARGKPSKDH*QVRTLALVWLK
Trigger: CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 72 bp CCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTaGTCATGTGGAGGTTCTTGGGATTCCCAGGAACAT +
Preference number: 3 (lower is better)
Translates to: PVSGPESLGLGC*SCGGSWDSQEH
Trigger: ATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CCA 72 bp AAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGGCCCAGATGGTTACCG +
Preference number: 3 (lower is better)
Translates to: KDHWQVRTLALV*LKEVGGPRWLP
Trigger: CGGTAACCATCTGGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp GATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCCGCTCTTTCACTCGGTaGGTTTCCTCCTGTTGCCGT +
Preference number: 3 (lower is better)
Translates to: DKDPMPLRLEPSQQDIKGRSFTR*VSSCCR
Trigger: ACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCG...GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR TCA 72 bp AGCCGAAGAGTGGAATCGGGATGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTGTGTCAGGCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: SRRVESGWKQYA*ASKGGLCQACP
Trigger: GGGGCAAGCCTGACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTCTTCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR TCA 72 bp CTTGCTCAAAGGGGAACTCAAAGGAGAAGAGGCGCTTaGAGGTCCAAAGTCAGCAAGGCCAGCAGGCCGAAC +
Preference number: 3 (lower is better)
Translates to: LAQRGTQRRRGA*RSKVSKASRPN
Trigger: GTTCGGCCTGCTGGCCTTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTTTGAGTTCCCCTTTGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 72 bp TCTGCAGCCAGTTCAGGGGCCCCATTCAACAAACACTaGTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACT +
Preference number: 3 (lower is better)
Translates to: SAASSGAPFNKH*LAARLPPSFRT
Trigger: AGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR GCA 72 bp ATGGTGCCTTTACAGATGAGCCGGTACACAGTAACCTaGTTTGTCTGCCCTAAGCGGTGGGCCCTGTCCATG +
Preference number: 3 (lower is better)
Translates to: MVPLQMSRYTVT*FVCPKRWALSM
Trigger: CATGGACAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 72 bp CGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTaGCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RLRSFTRLVSSC*RFSSCRSLSFF
Trigger: GAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CCA 72 bp ACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCA +
Preference number: 3 (lower is better)
Translates to: TFPASACALSLG*FPPVAVSLPAA
Trigger: TGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR CAA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTATGGAAGGTGCTACGGTaGCTGGTAGGATCTGAAGGT +
Preference number: 3 (lower is better)
Translates to: LNSAIFRCANQRLARPEVWKVLR*LVGSEG
Trigger: ACCTTCAGATCCTACCAGCAACCGTAGCACCTTCCA...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGAAGGACCCTATGCCCTaGAGACTTGAGCCGAGTCAG +
Preference number: 3 (lower is better)
Translates to: CILFPLPLALFHSVGFLLKDPMP*RLEPSQ
Trigger: CTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTT...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CAA 90 bp CTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGATGAGGTGCTTCCTGAACCTTaGGGGCGGCCTCGGCTTCGG +
Preference number: 3 (lower is better)
Translates to: LLLGSLQNAFFNGAFTDEVLPEP*GRPRLR
Trigger: CCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCAC...CTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR TCA 72 bp TCCTTGCCTGGAATCCTGATGAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGACCTCCAGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SLPGILMKDQPF*GLMLHRPPAGS
Trigger: AGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTTCATCAGGATTCCAGGCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR TCA 72 bp GCTGATGGAGATCTCACTGAAAGGGCTTGGCATGGCTaGGTCCACGCTAATGAAGGAGTCATCTCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: ADGDLTERAWHG*VHANEGVISVS
Trigger: GCTGACGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGAGATCTCCATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 72 bp TGGACATTTCCACTTCTGACTCAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAAAGACCACTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: WTFPLLTQDARC*TGQAIQRPLAG
Trigger: ACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp TGCTGGACATTTCCACTTCTGACTCAGGATGCAAGATaGTGCACGGGGCAAGCCATCCAAAGACCACTGGCA +
Preference number: 3 (lower is better)
Translates to: CWTFPLLTQDAR*CTGQAIQRPLA
Trigger: TGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp GAGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTaGGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAG +
Preference number: 3 (lower is better)
Translates to: EKSLPWKALHST*GDFARDVSEPK
Trigger: CTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp ACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTaGCGCAGCCTCAGTTTCTTCTCCAACTCTTCGTCG +
Preference number: 3 (lower is better)
Translates to: TRLVSSCCRFSS*RSLSFFSNSSS
Trigger: CGACGAAGAGTTGGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR GCA 72 bp CTGCTGTCCCTTCCTCTCTCAGTGCAATATAGACAGTaGATACAGCCAAGCAGGGGACTGAAGGGCATGAGC +
Preference number: 3 (lower is better)
Translates to: LLSLPLSVQYRQ*IQPSRGLKGMS
Trigger: GCTCATGCCCTTCAGTCCCCTGCTTGGCTGTATGCACTGTCTATATTGCACTGAGAGAGGAAGGGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp GGCTCTGGGAAGAACTGTGATCGTCTATTTAGCCAGTCTGCAGCCAGTTCAGGGTTCAACAAACACTGCTaGGCTGCCAGACTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: GSGKNCDRLFSQSAASSGFNKHC*AARLPP
Trigger: AGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAA...CCCTGAACTGGCTGCAGACTGGCTAAATAGACGATCACAGTTCTTCCCAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR CAA 90 bp TTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTGGTGTTCTGTGCTTGTaGGGTAGAGCCCATAGAAGA +
Preference number: 3 (lower is better)
Translates to: FPLPLALFHSVGFLLLPFGVLCL*GRAHRR
Trigger: TCTTCTATGGGCTCTACCCAACAAGCACAGAACACC...AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CAA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCGGTGGTGTTCTGTGCTaGTTGGGTAGAGCCCATAGA +
Preference number: 3 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSGGVLC*LGRAHR
Trigger: TCTATGGGCTCTACCCAACAAGCACAGAACACCACC...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR GCA 72 bp CAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTaGAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGC +
Preference number: 3 (lower is better)
Translates to: QSIETQFRDFQV*KSEACPPGGTC
Trigger: GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 72 bp CGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTaGAATCGGGATGGAAACAGTATGCCTGAGCATCTA +
Preference number: 3 (lower is better)
Translates to: RRLCKGRVRAEE*NRDGNSMPEHL
Trigger: TAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp TTTAGACACGTTGTACCCGTATGCGGCATAGGCAGCTGCAGAGGCCGCTGCAGCTTCAAGGTATCTGGTTaGAAGTTCCCACCTGAAATC +
Preference number: 3 (lower is better)
Translates to: FRHVVPVCGIGSCRGRCSFKVSG*KFPPEI
Trigger: GATTTCAGGTGGGAACTTCAAACCAGATACCTTGAA...GCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp TTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCTCTTTGGGTTTCAAGCTAGCCCTGGTTTGGTaGAAGGAAGTCGGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: FSNSSSSRRRLTTSLGFKLALVW*KEVGGP
Trigger: GGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAG...CTTGAAACCCAAAGAGGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp GGAAAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCCCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGA +
Preference number: 3 (lower is better)
Translates to: GKLTPRRKSLFLRYLWWLPSAER*ELSAEG
Trigger: TCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGG...GAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CAA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGGAACATTATTTCCCTaGCTCAAAGGGGAACTCAAA +
Preference number: 3 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLGTLFP*LKGELK
Trigger: TTTGAGTTCCCCTTTGAGCAAGGGAAATAATGTTCC...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCGGCAGCTGCAAAGGTTaGGAAAGGAGAGTGGAAAAT +
Preference number: 3 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSGSCKG*ERRVEN
Trigger: ATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGCC...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR TCA 72 bp ATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTaGAGACTGTGGACAACAGGTATACAATCTCCCTTA +
Preference number: 3 (lower is better)
Translates to: MTLWGSETWGAA*RLWTTGIQSPL
Trigger: TAAGGGAGATTGTATACCTGTTGTCCACAGTCTTCAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR GCA 72 bp AGAGGTTTAAGACTTGGCTATACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: RGLRLGYTVHLR*SGADPCPVAFL
Trigger: GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 72 bp GGATCTGAAGGTTCTCTTGGTGTGAACCATGCAGGATaGGAGGAATTGCTGGGAACACAACTGCCTGTGGAT +
Preference number: 3 (lower is better)
Translates to: GSEGSLGVNHAG*EELLGTQLPVD
Trigger: ATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCACACCAAGAGAACCTTCAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CCA 72 bp AGTCTGGGGCTAGGCTGCTGGTCATGTGGAGGTTCTTaGGATTCCCAGGAACATTATTTCCCTTGCTCAAAG +
Preference number: 3 (lower is better)
Translates to: SLGLGCWSCGGS*DSQEHYFPCSK
Trigger: CTTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCCTAGCCCTGGTTTGGTaGAAGGAAGTCGGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLLALVW*KEVGGP
Trigger: GGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAG...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGGTGAAAGAGAGACCGTaGGATATAGTCTGGTGCAAA +
Preference number: 3 (lower is better)
Translates to: SLKGLGMAESTLMKESSPVKERP*DIVWCK
Trigger: TTTGCACCAGACTATATCCAACGGTCTCTCTTTCAC...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR TCA 72 bp ATCAGCAACCATGTCTCGCCTCTCCGAGATCTTGGATaGGCCATCAAGCCTCATGTAGGTATGCTTCCTGTA +
Preference number: 3 (lower is better)
Translates to: ISNHVSPLRDLG*AIKPHVGMLPV
Trigger: TACAGGAAGCATACCTACATGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCGAGACATGGTTGCTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
3UTR-3UTR CAA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCGTTGGTTTCCTCCTGTaGCCGTTTCTCTTCCTGCCG +
Preference number: 3 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTVGFLL*PFLFLP
Trigger: CGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAAC...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR-3UTR CAA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTCATCAATAGCAGATTaGTTTTCGGCATGGCTCTCA +
Preference number: 3 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSSSIAD*FSAWLS
Trigger: TGAGAGCCATGCCGAAAACAAATCTGCTATTGATGA...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR TCA 72 bp TGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTaGGACGGAGCCTGTTATGGATGCGGGAGAGTTGGT +
Preference number: 3 (lower is better)
Translates to: WHFLNGNSIHGI*DGACYGCGRVG
Trigger: ACCAACTCTCCCGCATCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR-3UTR CAA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCAAGGAGAAGAGGCGCTaGAAGGTCCAAAGTCAGCAA +
Preference number: 3 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTKEKRR*KVQSQQ
Trigger: TTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTT...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR GCA 72 bp ACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTaGACTTCGGTCATTGCAGTAAGAATCCAATGGCAC +
Preference number: 3 (lower is better)
Translates to: TPSFLQNSPFIF*TSVIAVRIQWH
Trigger: GTGCCATTGGATTCTTACTGCAATGACCGAAGTGCAGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR-3UTR CAA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGG +
Preference number: 3 (lower is better)
Translates to: KINLSKLNSAIFRCANQRDSSPG*VEGSRR
Trigger: CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTC...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR-3UTR CAA 90 bp AGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTGTGGCTCTCAATGTCCTaGGAAAACCATTCATTAAAT +
Preference number: 3 (lower is better)
Translates to: SRTSRAYSFPLSVMRLSLWLSMS*ENHSLN
Trigger: ATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCA...CAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CAA 90 bp AAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCTCCTTCAAGGTATCTGGTTaGAAGTTCCCACCTGAAATC +
Preference number: 3 (lower is better)
Translates to: KLTPRRKSLFLRYLWWLSFKVSG*KFPPEI
Trigger: GATTTCAGGTGGGAACTTCAAACCAGATACCTTGAA...GGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR TCA 72 bp TTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAATCTCACTCTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: FGFQGIWFEVPT*NHHPLNLTLLL
Trigger: AAGGAGAAGAGTGAGATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAACCAGATACCTTGAAACCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR TCA 72 bp GACAGGAAAAGAGCTAACCATCTGGCCAAAAGTCCCTaGAGCATAAGGTTTGCCATTTCTGCTGGAGATATA +
Preference number: 3 (lower is better)
Translates to: DRKRANHLAKSP*SIRFAISAGDI
Trigger: TATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAGATGGTTAGCTCTTTTCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
3UTR-3UTR CAA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTCTCCTTGGCTCTTaGCAGAATGCGTTCTTCAAT +
Preference number: 3 (lower is better)
Translates to: KINLSKLNSAIFRCANQRLLLGS*QNAFFN
Trigger: ATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGTCGCCCCGCCGACGGTaGAGCCGCGGTTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QQHCLPWTFGSGPSLLLWSPRRR*SRGSLS
Trigger: AGAGAGCGAACCGCGGCTCCACCGTCGGCGGGGCGA...CCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGGAAGCATCTCCTTGGTaGGGCGGCGGGCACGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEEASPW*GGGHEA
Trigger: TGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTC...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGCCGTGGGACGGTGACTaGGTTGGGCGTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: QQHCLPWTFGSGPSLLLWPWDGD*VGRGRS
Trigger: GGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGG...CCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp AGTCAGCAAGGCCAGCAGGCCGAACAAGGGATGTCTGCAGAGGACTGCTGGCGGGGCCGGTGCCGAGCCTaGCCCCTCTCTCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SQQGQQAEQGMSAEDCWRGRCRA*PLSPPS
Trigger: AGAGGGCGGAGAGAGGGGGCAGGCTCGGCACCGGCC...CCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCGGCCTGCTGGCCTTGCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGAGGCCGTGGGACGGTaGCTGCGTTGGGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQEAVGR*LRWAWT
Trigger: CGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTC...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCCCGTGGGACGGTGACTaGGTTGGGCGTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGPWDGD*VGRGRS
Trigger: GGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGG...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCAGCTCCGGCCCTTCCCTaGTCCTTTGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAAPALP*SFGCAS
Trigger: GGAAGCACAGCCAAAGGAGCAGGGAAGGGCCGGAGC...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGCCGGTGCCGAGCCTaGCCCCTCTCTCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPGRCRA*PLSPPS
Trigger: AGAGGGCGGAGAGAGGGGGCAGGCTCGGCACCGGCC...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp GCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTaGGCTGTGCTTCCTGAACCTTTGGGGCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AVDFRLRPFPAP*AVLPEPLGRPR
Trigger: CCGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACACCGTGGGACGGTGACTaGGTTGGGCGTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTPWDGD*VGRGRS
Trigger: GGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGG...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACAAGCTGCAGAGGCCGCTaGAGCCCCGGCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTSCRGR*SPGFGS
Trigger: GGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCT...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGGGCTGGGAGGGCCGGTaGCGAGCCTGCCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWEGWEGR*RACPLS
Trigger: AGAGAGGGGGCAGGCTCGGCACCGGCCCTCCCAGCC...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCCCGCGGTTCGCTCTCTaGGGCCGTGGGACGGTGACT +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSPRFAL*GRGTVT
Trigger: AGTCACCGTCCCACGGCCTCAGAGAGCGAACCGCGG...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGCTCCGGCCCTTCCCTaGTCCTTTGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGAPALP*SFGCAS
Trigger: GGAAGCACAGCCAAAGGAGCAGGGAAGGGCCGGAGC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCACTGGGGCTAGGCTGCTaGTCATGTGGAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQALGLGC*SCGGSW
Trigger: CCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAG...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGTCGGAGGGCCCAGATaGTTACCGTCCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGVGGPR*LPSSRG
Trigger: CCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGAC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGTCCTGGTCTCTCTACTaGCTTCTGGGAGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPLCLYWRAASSGWPGWESWSLY*LLGVPW
Trigger: CCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGA...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCGCCTCGGCTTCGGGCTaGGTGACCACGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCASASG*VTTSCS
Trigger: GCTGCAGGACGTGGTCACTCAGCCCGAAGCCGAGGC...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCAGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAGMEPV*SSLLME
Trigger: CTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGTTTGGCTCCTGCCATTaGAGCAGCACTGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QQHCLPWTFGSGPSLLLWFGSCH*SSTACR
Trigger: ACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAA...CCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACACCCGGCTTTGGCTCCTaGCATTGCAGCAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTPGFGS*HCSSTA
Trigger: GGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGG...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTGCGGCATAGGCAGCTaGAGAGGCCGCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCCGIGS*RGRCSP
Trigger: GGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCA...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGTGCGGCATAGGCAGCTaGAGAGGCCGCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKCGIGS*RGRCSP
Trigger: GGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCA...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCCTCACACCATCCACCTaGCTGTCCTTCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGLTPST*LSFPCW
Trigger: CCAGCAGGGGAAGGACAGGCAGGTGGATGGTGTGAG...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTGGGCCCTGTCCATaGCCTGCTGGTCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPGGPCP*PAGPQW
Trigger: CCACTGTGGACCAGCAGGCCATGGACAGGGCCCACC...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCAGGGGGAGGTGCATCGTaGGAAAACTTGGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAGGGAS*ENLAKT
Trigger: AGTCTTTGCCAAGTTTTCTCACGATGCACCTCCCCC...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCCCAGCATGTCACTGCTaGTCTCGTCCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGPACHC*SRPGEW
Trigger: CCATTCCCCTGGACGAGAGCAGCAGTGACATGCTGG...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGCCCGGCTTTGGCTCCTaGCATTGCAGCAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRPGFGS*HCSSTA
Trigger: GGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGG...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGGGCTGGGAGGGCCGGTaGCGAGCCTGCCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CILFPLPLALFHSVGFLLGWEGR*RACPLS
Trigger: AGAGAGGGGGCAGGCTCGGCACCGGCCCTCCCAGCC...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTTCGCCCCGCCGACGGTaGAGCCGCGGTTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCSPRRR*SRGSLS
Trigger: AGAGAGCGAACCGCGGCTCCACCGTCGGCGGGGCGA...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCCAGCACTGCCTGCCGTaGACTTTCGGCTCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTQHCLP*TFGSGP
Trigger: AGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTG...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCGAGGCCGTGGGACGGTaGCTGCGTTGGGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSEAVGR*LRWAWT
Trigger: CGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTC...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACACAGCGAGGAGGTAGCTaGTCTCCGCTGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTQRGGS*SPLMDN
Trigger: GTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTG...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGAGGACCCTATGCCCTTaGGACTTGAGCCGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQRTLCP*DLSRVS
Trigger: GCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCT...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR TCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTTGGTAGCTCGAGACTaGGGGGCTGAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSLVARD*GAEEAG
Trigger: CCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCGCCTCGGCTTCGGGCTaGGTGACCACGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESASASG*VTTSCS
Trigger: GCTGCAGGACGTGGTCACTCAGCCCGAAGCCGAGGC...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR TCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGACCTGGGGAGCTGCCTaGAGACTGTGGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQTWGAA*RLWTTG
Trigger: ACCTGTTGTCCACAGTCTTCAGGCAGCTCCCCAGGT...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCACAAGGACCTCCGACTaGACGGCTCGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESTRTSD*TARAAW
Trigger: CCAGGCGGCCCGAGCCGTGCAGTCGGAGGTCCTTGT...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAAGATAGAGGGGCTTTaGCAGCTCAGTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGKIEGL*QLSAAS
Trigger: GGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTT...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTCAGTTCTTCTGGGCCTaGAAGGCAGCTCGACGCACC +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPQFFWA*KAARRT
Trigger: GGTGCGTCGAGCTGCCTTGCAGGCCCAGAAGAACTG...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGCAGTTCTTCTGGGCCTaGAAGGCAGCTCGACGCACC +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRQFFWA*KAARRT
Trigger: GGTGCGTCGAGCTGCCTTGCAGGCCCAGAAGAACTG...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGCTCTTCACAGCACCTaGGGAGACTTTGCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGALHST*GDFARD
Trigger: GTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp TCGGAGGGCCCAGATGGTTACCGTCCTCCAGAGGGGTaGGTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SEGPDGYRPPEG*VPLPCFRTRES
Trigger: AGACTCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCATCCTGGATACCATCATaGCCCATATCTCGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQASWIPS*PISRLR
Trigger: TCGCAAACGAGATATGGGTCATGATGGTATCCAGGA...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGAAGATGGCAGCTCAGTaGGCAGGCAGCGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESKMAAQ*AGSDAA
Trigger: CGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATCTT...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGGGACATTTCCACTTCTaGCTCAGGATGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEGHFHF*LRMQDA
Trigger: AGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCC...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTACCTGGGGAGCTGCCTaGAGACTGTGGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPTWGAA*RLWTTG
Trigger: ACCTGTTGTCCACAGTCTTCAGGCAGCTCCCCAGGT...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGGGCTGTCCTGCTGATTaGGGTGGCTCCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPGCPAD*GGSWSL
Trigger: GAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCC...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCACAAGGACCTCCGACTaGACGGCTCGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLTRTSD*TARAAW
Trigger: CCAGGCGGCCCGAGCCGTGCAGTCGGAGGTCCTTGT...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGCTTTGCCAGCTCAGTaGAGCCTCCATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPALPAQ*SLHHPW
Trigger: CCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGC...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGTGTGGAGAGCAGGCCTaGACTGTAGTACTGATATTG +
Preference number: 4 (lower is better)
Translates to: LPLCLYWRAASSGWPGWECGEQA*TVVLIL
Trigger: CAATATCAGTACTACAGTGCAGGCCTGCTCTCCACA...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGACGCACCTCCTTCATaGACTGGTGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGDAPPS*TGEQAF
Trigger: GAAAGCTTGCTCACCAGTGCATGAAGGAGGTGCGTC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACAGGAGCCTGTTATGGATaGGGGAGAGTTGGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTGACYG*GRVGSS
Trigger: CGAGCTACCAACTCTCCCGCATCCATAACAGGCTCC...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGTGCAGCAGCACTGCCTaGCGTGGACTTTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRCSSTA*RGLSAP
Trigger: CGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCA...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGTGCAGCAGCACTGCCTaGCGTGGACTTTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESCSSTA*RGLSAP
Trigger: CGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCA...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGTTTGGCTCCTGCCATTaGAGCAGCACTGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRFGSCH*SSTACR
Trigger: ACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAA...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGCTCCAGAGGGGTTGGTaGCTTTGCCCTGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRLQRGW*LCPVSG
Trigger: TCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAG...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCCGCGATTTTCAGGTGTaGAAATCAGAGGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGRDFQV*KSEACP
Trigger: CGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGACCAGCCCGGATAGATaGGTTAGCCAGGCTATAACT +
Preference number: 4 (lower is better)
Translates to: QQHCLPWTFGSGPSLLLWTSPDR*VSQAIT
Trigger: AGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGT...CCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp GTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGCTCAGGTATCTCTGGTaGCTCTCCCCTTCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: VPLPCFRTRESGARLLVMLRYLW*LSPSGA
Trigger: AGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAG...CATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTCTGTCCATGGCCTGCTaGTCCACAGTGGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSLSMAC*STVGFQ
Trigger: CTGGAACCCCACTGTGGACCAGCAGGCCATGGACAG...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCVCPKR*ALSMAC
Trigger: GCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGAC...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACTGCAGCCCCGGCTTTaGCTCCTGCCATTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLLQPRL*LLPLQQ
Trigger: CTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGGTCGGAGGGCCCAGATaGTTACCGTCCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRVGGPR*LPSSRG
Trigger: CCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGAC...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp GACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTaGAAGGAAGTCGGAGGGCCCAGATGGTTACCGTCC +
Preference number: 4 (lower is better)
Translates to: DHWQVRTLALVW*KEVGGPRWLPS
Trigger: GGACGGTAACCATCTGGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCGCGGTTCGCTCTCTaGGGCCGTGGGACGGTGACT +
Preference number: 4 (lower is better)
Translates to: SLHTFPASACALSLGWFPPRFAL*GRGTVT
Trigger: AGTCACCGTCCCACGGCCTCAGAGAGCGAACCGCGG...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGACTTTGGTCTGGTGGTaGTGGCGACGAGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRTLVWW*WRRGDS
Trigger: AGAATCCCCTCGTCGCCATCACCACCAGACCAAAGT...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTGAACCTTTGGGGCGGCCTCGGCTTCGGGCTGAGTGACCACGTCCTGCAGCTGTCCTGGATACCATCATaGCCCATATCTCGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LNLWGGLGFGLSDHVLQLSWIPS*PISRLR
Trigger: TCGCAAACGAGATATGGGTCATGATGGTATCCAGGA...CAGCTGCAGGACGTGGTCACTCAGCCCGAAGCCGAGGCCGCCCCAAAGGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAAGATGGCAGCTCAGTaGGCAGGCAGCGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRKMAAQ*AGSDAA
Trigger: CGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATCTT...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTATTGGTAGCTCGAGACTaGGGGGCTGAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVLVARD*GAEEAG
Trigger: CCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAA...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGTTTGGCTGTGCTTCCTaGACCTTTGGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRFGCAS*TFGAAS
Trigger: CGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAA...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGGAGATGCAGTGGGGCTaGTCCATGCCCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRREMQWG*SMPCGL
Trigger: AAGGCCACAGGGCATGGATCAGCCCCACTGCATCTC...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGCTATACAGTTCACTTaGGATGCAGTGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGAIQFT*DAVGLI
Trigger: GATCAGCCCCACTGCATCTCAAGTGAACTGTATAGC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGTGAGGCTGTCCTGCTaGTTGAGGTGGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSVRLSC*LRWLLV
Trigger: GACCAGGAGCCACCTCAATCAGCAGGACAGCCTCAC...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCCAAAGCTTCCTTCTCTaGTCTCTTGCGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGQSFLL*SLAVLL
Trigger: AAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTG...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGTCATCCAACTTCCGCTaGTCCAAAGCTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QQHCLPWTFGSGPSLLLWSSNFR*SKASFS
Trigger: AGAGAAGGAAGCTTTGGAGCAGCGGAAGTTGGATGA...CCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCACACACCTTCCTAAACTaGATGACCAGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAHTFLN*MTRFMR
Trigger: CCTCATGAATCTGGTCATGCAGTTTAGGAAGGTGTG...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATTGGTTTCCTCCTGTTaGCGTTTCTCTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTLVSSC*RFSSCR
Trigger: GCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPGMEPV*SSLLME
Trigger: CTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGCCAGCATGTCACTGCTaGTCTCGTCCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWEPACHC*SRPGEW
Trigger: CCATTCCCCTGGACGAGAGCAGCAGTGACATGCTGG...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACCATTGCAGCAGCACTaGCTGCCGTGGACTTTCGGC +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLPLQQH*LPWTFG
Trigger: GCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGACTTCTGACTCAGGATaGAAGATGCTGCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQTSDSG*KMLHGA
Trigger: TGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGT...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGCTCACACCATCCACCTaGCTGTCCTTCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRLTPST*LSFPCW
Trigger: CCAGCAGGGGAAGGACAGGCAGGTGGATGGTGTGAG...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGTGGGGCTGATCCATaGCCTGTGGCCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTSGADP*PVAFLL
Trigger: TAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACT...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCCCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGG +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSPPGGT*STRDIR
Trigger: CCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGG...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACGCTCTCTGAGGCCGTaGGACGGTGACTGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRRSLRP*DGDCVG
Trigger: CCCAACGCAGTCACCGTCCCACGGCCTCAGAGAGCG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTGCAGCTCACTCTCAGGTATCTCTGGTaGCTCTCCCCTTCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: QHVTAALVQGNGASVQLTLRYLW*LSPSGA
Trigger: AGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAG...AGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGCTCACTGCTTTACAGTaGCTGCTGAAAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LPLCLYWRAASSGWPGWELTALQ*LLKTRD
Trigger: GTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAG...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCGGTGGGCCCTGTCCATaGCCTGCTGGTCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: VSRTSRAYSFPLSVMRLSGGPCP*PAGPQW
Trigger: CCACTGTGGACCAGCAGGCCATGGACAGGGCCCACC...GGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGTGCTTCCTGAACCTTTaGGGCGGCCTCGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRCFLNL*GGLGFG
Trigger: CCCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCA...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGCTGATCCATGCCCTGTaGCCTTCCTCCTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPLIHAL*PSSYRH
Trigger: GTGCCTGTAGGAGGAAGGCCACAGGGCATGGATCAG...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGTGGGAGTCCCCTGGGTaGAAGGTGCTACGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESWESPG*KVLRLL
Trigger: CAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCA...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGACTTTGGTCTGGTGGTaGTGGCGACGAGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKTLVWW*WRRGDS
Trigger: AGAATCCCCTCGTCGCCATCACCACCAGACCAAAGT...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TTCGGGCTGAGTGACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATGAAGCATCTCCTTGGTaGGGCGGCGGGCACGAGGCA +
Preference number: 4 (lower is better)
Translates to: FGLSDHVLQLAFPEWKFHEASPW*GGGHEA
Trigger: TGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTC...ATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTCACTCAGCCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCAAGATGGCAGCTCAGTaGGCAGGCAGCGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSKMAAQ*AGSDAA
Trigger: CGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATCTT...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCCTGGGTCATCCACAATaGCCAGCATGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCLGHPQ*PACHCC
Trigger: GCAGCAGTGACATGCTGGTCATTGTGGATGACCCAG...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTGCCACTTTCACTCACTaGGAGGAGCGGAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCATFTH*EERSRD
Trigger: GTCCCTGCTCCGCTCCTCTCAGTGAGTGAAAGTGGC...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648947.1
CDS-3UTR GCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGCTTTGCCAGCTCAGTaGAGCCTCCATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESALPAQ*SLHHPW
Trigger: CCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGC...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGTCAGCAAGGCCAGCAGGCCGAACAAGGGATGTCTGCAGAGGACTGCTGGCGGTTGAGTTTTCGCTGTTaGCTCTTGGCCTCCCGCATT +
Preference number: 4 (lower is better)
Translates to: SQQGQQAEQGMSAEDCWRLSFRC*LLASRI
Trigger: AATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAA...CCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCGGCCTGCTGGCCTTGCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGGGCCAGAAGGGCAATaGTCTGTACTGTTTTACCAA +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGGPEGQ*SVLFYQ
Trigger: TTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGTAACCTGCTTTGTCTaGCCTAAGCGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLVTCFV*PKRWAL
Trigger: CAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTAC...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCCGGTACACAGTAACCTaGTTTGTCTGCCCTAAGCGG +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSRYTVT*FVCPKR
Trigger: CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCG...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCATTCTCCTTGGCTCTTTaGAGAATGCGTTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAFSLAL*RMRSSM
Trigger: CATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAA...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTGCCGTTTCTCTTCCTaGCGCAGCCTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VPLPCFRTRESGARLLVMCRFSS*RSLSFF
Trigger: GAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCA...CATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTTTCCCGCTTCCGCTTaGGCTCTTTCACTCGGTTGG +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCFPASA*ALSLGW
Trigger: CCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAA...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTGGAGCCTGTTATGGATaGGGGAGAGTTGGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSGACYG*GRVGSS
Trigger: CGAGCTACCAACTCTCCCGCATCCATAACAGGCTCC...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGCTCCGGCCCTTCCCTaGTCCTTTGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGAPALP*SFGCAS
Trigger: GGAAGCACAGCCAAAGGAGCAGGGAAGGGCCGGAGC...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCCCCGGCTTTGGCTCCTaGCATTGCAGCAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSPGFGS*HCSSTA
Trigger: GGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGG...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATAGCTGCAGAGGCCGCTaGAGCCCCGGCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYSCRGR*SPGFGS
Trigger: GGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCT...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCGGCATAGGCAGCTaGAGAGGCCGCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTCGIGS*RGRCSP
Trigger: GGGGCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCA...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCACGAACAAGGGATGTCTaGAGAGGACTGCTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSRTRDV*RGLLAE
Trigger: CTCCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCG...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGTCTGGGGCTAGGCTaGTGGTCATGTGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSSLGLG*WSCGGS
Trigger: AGAACCTCCACATGACCAGCAGCCTAGCCCCAGACT...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTCAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSQDARC*TGQAIQ
Trigger: TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTG...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGACTCAGGATGCAAGATaGTGCACGGGGCAAGCCATC +
Preference number: 4 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKTQDAR*CTGQAI
Trigger: GATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGT...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGGGGCAAAGGGGACTCTaGAAGAGGGGCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRGQRGL*KRGSEA
Trigger: AGCCTCACTGCCCCTCTTGCAGAGTCCCCTTTGCCC...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCCCCAAAGCTCTGCCATaGTGTTCTGAATTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSPKALP*CSELGS
Trigger: GGACCCCAATTCAGAACACCATGGCAGAGCTTTGGG...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAGCAGCACTGCCTGCCGTGGACTTTCGGCTCCGGCCCTTCCCTGCTCCTTTGGCTCACTGCTTTACAGTaGCTGCTGAAAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QQHCLPWTFGSGPSLLLWLTALQ*LLKTRD
Trigger: GTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAG...CCAAAGGAGCAGGGAAGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACACACTGCGGTAACTCGTaGACTGGCCACACACAAAAA +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTHCGNS*TGHTQK
Trigger: TTTTTGTGTGTGGCCAGTCCACGAGTTACCGCAGTG...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAACAAACACTGCTTaGCTGCCAGACTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTSTNTA*LPDSLL
Trigger: AAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGA...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGTGCTTCCTGAACCTTTaGGGCGGCCTCGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKCFLNL*GGLGFG
Trigger: CCCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCA...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGCTGCAGCCCCGGCTTTaGCTCCTGCCATTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CILFPLPLALFHSVGFLLLQPRL*LLPLQQ
Trigger: CTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAG...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTCTTCTGGGAGTCCCCTaGGTGGAAGGTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSLLGVP*VEGATV
Trigger: AACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAG...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp GCAGCCAGTTCAGGGGCCCCATTCAACAAACACTGCTaGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGC +
Preference number: 4 (lower is better)
Translates to: AASSGAPFNKHC*AARLPPSFRTR
Trigger: GCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR TCA 90 bp GTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTCATCGTCTTCACTCTaGGAATCAGCCTCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VPLPCFRTRESGARLLVMSSSSL*ESASLD
Trigger: ATCCAGCGAGGCTGATTCTCAGAGTGAAGACGATGA...CATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCTCCTTCATGCACTGGTaGGCAAGCTTTCGGCTATTG +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSSFMHW*ASFRLL
Trigger: CAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGA...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTATCTGCCATGGTGTTCTaGATTGGGGTCCCGGTTAGC +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLSAMVF*IGVPVS
Trigger: GCTAACCGGGACCCCAATTCAGAACACCATGGCAGA...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGTAGCTGATCTCCGCTaGTGGACAACCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: IFRCANQRLARPEVPAPPVADLR*WTTWSE
Trigger: CTCAGACCAGGTTGTCCATCAGCGGAGATCAGCTAC...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGTAGCTGATCTCCGCTaGTGGACAACCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESVADLR*WTTWSE
Trigger: CTCAGACCAGGTTGTCCATCAGCGGAGATCAGCTAC...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCAAGATGGCAGCTCAGTaGGCAGGCAGCGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVKMAAQ*AGSDAA
Trigger: CGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATCTT...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPKDQPF*GLMLHR
Trigger: TCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTT...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCTATGCCCTTGAGACTTaGGCCGAGTCAGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTYALET*AESAGH
Trigger: ATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATA...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR TCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTAAGGACCCTATGCCCTTaGGACTTGAGCCGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVRTLCP*DLSRVS
Trigger: GCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCT...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR TCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTCTGGGTCATCCACAATaGCCAGCATGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSLGHPQ*PACHCC
Trigger: GCAGCAGTGACATGCTGGTCATTGTGGATGACCCAG...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGATTTGGCTGTGCTTCCTaGACCTTTGGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRFGCAS*TFGAAS
Trigger: CGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAA...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACAGGACATTTCCACTTCTaGCTCAGGATGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTGHFHF*LRMQDA
Trigger: AGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCC...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGGCAAACACTGCTGATTaGGGTGGCTCCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLANTAD*GGSWSL
Trigger: GAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTGC...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR GCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGTCATCCAACTTCCGCTaGTCCAAAGCTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQSSNFR*SKASFS
Trigger: AGAGAAGGAAGCTTTGGAGCAGCGGAAGTTGGATGA...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGTTGAGTTTTCGCTGTTaGCTCTTGGCCTCCCGCATT +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRLSFRC*LLASRI
Trigger: AATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAA...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCAGAATCCAATGGCACTaGGGTAACTCGTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCRIQWH*GNSWTG
Trigger: GCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCT...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGAGAATCCAATGGCACTaGGGTAACTCGTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWERIQWH*GNSWTG
Trigger: GCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCT...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGGTAACCTGCTTTGTCTaGCCTAAGCGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRVTCFV*PKRWAL
Trigger: CAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTAC...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTGCCGTTTCTCTTCCTaGCGCAGCCTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSCRFSS*RSLSFF
Trigger: GAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTTGGTTTCCTCCTGTTaGCGTTTCTCTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSLVSSC*RFSSCR
Trigger: GCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAATGCAGCAGCACTGCCTaGCGTGGACTTTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQCSSTA*RGLSAP
Trigger: CGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCA...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTAGCTGCAGAGGCCGCTaGAGCCCCGGCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLSCRGR*SPGFGS
Trigger: GGAGCCAAAGCCGGGGCTGCAGCGGCCTCTGCAGCT...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGTGGGGCTGATCCATaGCCTGTGGCCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRSGADP*PVAFLL
Trigger: TAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACT...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGTGCAAATCAGAGGCTTaGCCGCCCGGAGGTACCTGC +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKCKSEA*PPGGTC
Trigger: GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCA...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGGGCAAAGGGGACTCTaGAAGAGGGGCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRGQRGL*KRGSEA
Trigger: AGCCTCACTGCCCCTCTTGCAGAGTCCCCTTTGCCC...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCTTGCGACTCATGAAATaGGCATACAACTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGLRLMK*AYNSVW
Trigger: CCAGACAGAGTTGTATGCCCATTTCATGAGTCGCAA...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGCCCGGATAGATaGGTTAGCCAGGCTATAACT +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSTSPDR*VSQAIT
Trigger: AGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGT...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGTCTCTCTCAGCCAGATaGGCCAGAAGGGCAATGCTC +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLSLSAR*ARRAML
Trigger: GAGCATTGCCCTTCTGGCCCATCTGGCTGAGAGAGA...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGCAGCTTCTGTCGGCTaGTCAGTTGGCAATACATTA +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQAASVG*SVGNTL
Trigger: TAATGTATTGCCAACTGACCAGCCGACAGAAGCTGC...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTTTCCTCAGGTATCTCTaGTGGCTCTCCCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSFLRYL*WLSPSG
Trigger: GCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAA...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGAGGCTCTCCTTGCCTaGAATCCTGATGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTREALLA*NPDERP
Trigger: TGGTCTTTCATCAGGATTCCAGGCAAGGAGAGCCTC...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR CCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCCGTCAGCAGAGAGGTTaGAGTTATCAGCCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCRQQRG*SYQPRE
Trigger: TTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACG...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGACCACGTCCTGCAGCTaGCATTTCCTGAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQTTSCS*HFLNGN
Trigger: ATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGT...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATCAGCACTGCCTGCCGTaGACTTTCGGCTCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYQHCLP*TFGSGP
Trigger: AGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTG...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGACTGCAGCCCCGGCTTTaGCTCCTGCCATTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRLQPRL*LLPLQQ
Trigger: CTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAG...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCTGATCCATGCCCTGTaGCCTTCCTCCTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCLIHAL*PSSYRH
Trigger: GTGCCTGTAGGAGGAAGGCCACAGGGCATGGATCAG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCGATGGGAGGAATTGCTaGGAACACAACTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCDGRNC*EHNCLW
Trigger: CCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATC...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGATGGGAGTCCCCTGGGTaGAAGGTGCTACGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGWESPG*KVLRLL
Trigger: CAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCA...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCTTCTGGGAGTCCCCTaGGTGGAAGGTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESLLGVP*VEGATV
Trigger: AACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAG...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401393.7
3UTR CAA 72 bp TCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTaGCCCGCCCGGAGGTACCTGCTCCACCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: SIPRFSGVQIRG*PARRYLLHQGH
Trigger: ATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGGGCCCAGATGGTTACC +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPG*VEGSRRAQMVT
Trigger: GGTAACCATCTGGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTCATCGTCTTCACTCTaGGAATCAGCCTCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSSSSSL*ESASLD
Trigger: ATCCAGCGAGGCTGATTCTCAGAGTGAAGACGATGA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGAGTCGAAGCATGTTGTaGAGTTCTTCTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQSRSML*SSSLLR
Trigger: TCTCAGCAGAGAAGAACTTCACAACATGCTTCGACT...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGGGGAGGTGCATCGTaGGAAAACTTGGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSGGGAS*ENLAKT
Trigger: AGTCTTTGCCAAGTTTTCTCACGATGCACCTCCCCC...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTGAAGCATCTCCTTGGTaGGGCGGCGGGCACGAGGCA +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLEASPW*GGGHEA
Trigger: TGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTC...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCTACTCTTGAGCGCCTaGGCCTCATCCAGTACCATG +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCLLLSA*ASSSTM
Trigger: CATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATTGTTCTTTAGTGCCTaGTATAGCAGCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTLFFSA*YSSFCR
Trigger: CCGACAGAAGCTGCTATATCAGGCACTAAAGAACAA...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGCAGCGAGGAGGTAGCTaGTCTCCGCTGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: SLKGLGMAESTLMKESSPQRGGS*SPLMDN
Trigger: GTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTG...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp GTGCCTTTACAGATGAGCCGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGCAGCGAGGAGGTAGCTaGTCTCCGCTGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: VPLQMSRYTVTCFVCPKRQRGGS*SPLMDN
Trigger: GTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTG...CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCAGGACCCTATGCCCTTaGGACTTGAGCCGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSRTLCP*DLSRVS
Trigger: GCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCT...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
CDS-3UTR TCA 90 bp TTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTGGGTCATCCACAATaGCCAGCATGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPLPLALFHSVGFLLLPFLGHPQ*PACHCC
Trigger: GCAGCAGTGACATGCTGGTCATTGTGGATGACCCAG...AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGGCCTCGGCTTCGGGCTaGGTGACCACGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQASASG*VTTSCS
Trigger: GCTGCAGGACGTGGTCACTCAGCCCGAAGCCGAGGC...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAATTTGGCTGTGCTTCCTaGACCTTTGGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQFGCAS*TFGAAS
Trigger: CGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAA...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGAGAGATGCAGTGGGGCTaGTCCATGCCCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDREMQWG*SMPCGL
Trigger: AAGGCCACAGGGCATGGATCAGCCCCACTGCATCTC...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAGAGATGCAGTGGGGCTaGTCCATGCCCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQEMQWG*SMPCGL
Trigger: AAGGCCACAGGGCATGGATCAGCCCCACTGCATCTC...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAACCTGGGGAGCTGCCTaGAGACTGTGGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRTWGAA*RLWTTG
Trigger: ACCTGTTGTCCACAGTCTTCAGGCAGCTCCCCAGGT...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCCATGCAAACACTGCTaGTTGAGGTGGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCPCKHC*LRWLLV
Trigger: GACCAGGAGCCACCTCAATCAGCAGTGTTTGCATGG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR TCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAGGCTGTCCTGCTGATTaGGGTGGCTCCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQGCPAD*GGSWSL
Trigger: GAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCC...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACGTGAGGCTGTCCTGCTaGTTGAGGTGGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ISVSREVGVISRGNKWDHVRLSC*LRWLLV
Trigger: GACCAGGAGCCACCTCAATCAGCAGGACAGCCTCAC...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCTGCTCAATGGATAAGTaGTTTTTCTTAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGCSMDK*FFLVPG
Trigger: CCCTGGCACTAAGAAAAAGCACTTATCCATTGAGCA...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAACAGTTCTTCTGGGCCTaGAAGGCAGCTCGACGCACC +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQQFFWA*KAARRT
Trigger: GGTGCGTCGAGCTGCCTTGCAGGCCCAGAAGAACTG...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGCAGAGCCCAAAGCTCTaGCATGGTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPQSPKL*HGVLNW
Trigger: CCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTG...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCCAGAGCCCAAAGCTCTaGCATGGTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTQSPKL*HGVLNW
Trigger: CCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTG...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCCCATTCAACAAACACTaGTTGGCTGCCAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCPFNKH*LAARLP
Trigger: AGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGG...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCGTCCTCCAGCTCGTGTaGTTAACAGGAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSVLQLV*LTGTQR
Trigger: TCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGAC...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGGTAACCTGCTTTGTCTaGCCTAAGCGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLKGLGMAESTLMKESSPVTCFV*PKRWAL
Trigger: CAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTAC...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATGGCTCTTTGCAGAATaGGTTCTTCAATGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTWLFAE*VLQWCL
Trigger: AAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCA...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTCCAGCATGTCACTGCTaGTCTCGTCCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLPACHC*SRPGEW
Trigger: CCATTCCCCTGGACGAGAGCAGCAGTGACATGCTGG...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCCCATTGCAGCAGCACTaGCTGCCGTGGACTTTCGGC +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVPLQQH*LPWTFG
Trigger: GCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGG...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGCCATTGCAGCAGCACTaGCTGCCGTGGACTTTCGGC +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGPLQQH*LPWTFG
Trigger: GCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGG...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGCTCCAGAGGGGTTGGTaGCTTTGCCCTGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKLQRGW*LCPVSG
Trigger: TCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAG...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTACTCAGGATGCAAGATaGTGCACGGGGCAAGCCATC +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCTQDAR*CTGQAI
Trigger: GATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGT...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAACTTCTGACTCAGGATaGAAGATGCTGCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLTSDSG*KMLHGA
Trigger: TGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGT...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCATGCCTGTCCTTCCCCTaGTGGACATTTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: IFRCANQRLARPEVPAPPCLSFP*WTFPLL
Trigger: CAGAAGTGGAAATGTCCAGCAGGGGAAGGACAGGCA...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGTCTGTGTCAGGCTTaGCCCGTGAGAGGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSGLCQA*PVRGLR
Trigger: TCTTAAACCTCTCACGGGGCAAGCCTGACACAGACC...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACAGGATGGGAGGAATTaGTGGGAACACAACTGCCTG +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLQDGRN*WEHNCL
Trigger: CAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GTGCCTTTGCCCTGTTTCCGGACCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTCTTGGTGTGAACCATaGAGGATGGGAGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: VPLPCFRTRESGARLLVMSWCEP*RMGGIA
Trigger: AGCAATTCCTCCCATCCTGCATGGTTCACACCAAGA...CATGACCAGCAGCCTAGCCCCAGACTCTCTGGTCCGGAAACAGGGCAAAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGG +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCPPGGT*STRDIR
Trigger: CCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGG...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCTGCAAATCAGAGGCTTaGCCGCCCGGAGGTACCTGC +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVCKSEA*PPGGTC
Trigger: GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCA...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTCGCTCTCTGAGGCCGTaGGACGGTGACTGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGRSLRP*DGDCVG
Trigger: CCCAACGCAGTCACCGTCCCACGGCCTCAGAGAGCG...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp TCCAAAGTCAGCAAGGCCAGCAGGCCGAACAAGGGATGTCTGCAGAGGACTGCTCCCAAAGCTCTGCCATaGTGTTCTGAATTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SKVSKASRPNKGCLQRTAPKALP*CSELGS
Trigger: GGACCCCAATTCAGAACACCATGGCAGAGCTTTGGG...AGCAGTCCTCTGCAGACATCCCTTGTTCGGCCTGCTGGCCTTGCTGACTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACTCAGGTATCTCTGGTaGCTCTCCCCTTCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRLRYLW*LSPSGA
Trigger: AGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGTTCCTCAGGTATCTCTaGTGGCTCTCCCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRFLRYL*WLSPSG
Trigger: GCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAA...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCTCTCCGAGATCTTaGATGAGCCATCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLASPRS*MSHQAS
Trigger: TGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGC...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGCTGGTCCACAGTaGGGTTCCAGTCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESPAGPQ*GSSRYH
Trigger: ATGATAGCGACTGGAACCCCACTGTGGACCAGCAGG...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR CCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGCCTGCTGGTCCACAGTaGGGTTCCAGTCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRPAGPQ*GSSRYH
Trigger: ATGATAGCGACTGGAACCCCACTGTGGACCAGCAGG...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTGGTGGGCCCTGTCCATaGCCTGCTGGTCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLGGPCP*PAGPQW
Trigger: CCACTGTGGACCAGCAGGCCATGGACAGGGCCCACC...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGVCPKR*ALSMAC
Trigger: GCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGAC...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTT +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTALSLG*FPPVAV
Trigger: AACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGC...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAAGGCTGCTGGTCATGTaGAGGTTCTTGGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: IFRCANQRLARPEVPAPPRLLVM*RFLGFP
Trigger: TGGGAATCCCAAGAACCTCCACATGACCAGCAGCCT...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCGTCCTCCAGAGGGGTTaGTGCCTTTGCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLVLQRG*CLCPVS
Trigger: GGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGAC...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSTLALV*LKEVGG
Trigger: CCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGT...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCTGATCCATGCCCTGTaGCCTTCCTCCTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLLIHAL*PSSYRH
Trigger: GTGCCTGTAGGAGGAAGGCCACAGGGCATGGATCAG...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCGTCAGAGCCGAAGAGTaGAATCGGGATGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCVRAEE*NRDGNS
Trigger: ACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGAC...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTCCAATGATGACACTCTaGGGTTCAGAGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSPMMTL*GSETWG
Trigger: TCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGG...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGCTTCTGGGAGTCCCCTaGGTGGAAGGTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: SLKGLGMAESTLMKESSPLLGVP*VEGATV
Trigger: AACCGTAGCACCTTCCACCCAGGGGACTCCCAGAAG...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
3UTR CAA 72 bp TACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCG +
Preference number: 4 (lower is better)
Translates to: YHGRLFTAPAET*QGTCQSRRVES
Trigger: CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp CCTGGTCATCTGGGAGTAGATAAGGACCCTATGCCCTaGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PGHLGVDKDPMP*RLEPSQQDIKG
Trigger: GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATCTACTCCCAGATGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
3UTR CAA 72 bp CCTTGCTCAAAGGGGAACTCAAAGGAGAAGAGGCGCTaGAAGGTCCAAAGTCAGCAAGGCCAGCAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: PCSKGNSKEKRR*KVQSQQGQQAE
Trigger: TTCGGCCTGCTGGCCTTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTTTGAGTTCCCCTTTGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTCCTTTTTCACAATGCTaGGCCATACTTTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSPFSQC*AILSCD
Trigger: GTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGG...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTTTGTTCTTTAGTGCCTaGTATAGCAGCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPLFFSA*YSSFCR
Trigger: CCGACAGAAGCTGCTATATCAGGCACTAAAGAACAA...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLKDQPF*GLMLHR
Trigger: TCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTT...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCTATGCCCTTGAGACTTaGGCCGAGTCAGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESYALET*AESAGH
Trigger: ATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATA...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR TCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGCTCCGAGATCTTGGATaGGCCATCAAGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRLRDLG*AIKPHV
Trigger: TACATGAGGCTTGATGGCTCATCCAAGATCTCGGAG...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGCTCCGAGATCTTGGATaGGCCATCAAGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESLRDLG*AIKPHV
Trigger: TACATGAGGCTTGATGGCTCATCCAAGATCTCGGAG...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGAGGGCTTGGCATGGCTaGGTCCACGCTAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKRAWHG*VHANEG
Trigger: TCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCT...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCCTGGGTCATCCACAATaGCCAGCATGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSLGHPQ*PACHCC
Trigger: GCAGCAGTGACATGCTGGTCATTGTGGATGACCCAG...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCGCAGCTGGCATTTCCTaGATGGAAATTCCATTCACG +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCAAGIS*MEIPFT
Trigger: CGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGC...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCATGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: IFRCANQRLARPEVPAPPWKQYA*ASKGGL
Trigger: CAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCA...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGTGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESWKQYA*ASKGGL
Trigger: CAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCA...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGTCAGCAAGGCCAGCAGGCCGAACAAGGGATGTCTGCAGAGGACTGCTGGCGGCCCTTACTAGCCCTATaGGAAATCACACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SQQGQQAEQGMSAEDCWRPLLAL*EITLLR
Trigger: TCTTAAGAGTGTGATTTCTCATAGGGCTAGTAAGGG...CCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCGGCCTGCTGGCCTTGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAAGGTTCTCTTGGTGTaGACCATGCAGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRKVLLV*TMQDGR
Trigger: CCTCCCATCCTGCATGGTTCACACCAAGAGAACCTT...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGGCTTTGCCAGCTCAGTaGAGCCTCCATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGALPAQ*SLHHPW
Trigger: CCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGC...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAAAGATAGAGGGGCTTTaGCAGCTCAGTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRKIEGL*QLSAAS
Trigger: GGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTT...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTGGAGGTTCTTGGGATTCCCAGTCCAGTACCATGTATTaGCACTTGACCCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PESLGLGCWSCGGSWDSQSSTMY*HLTRWK
Trigger: TTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGA...CTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGCCATTCAACAAACACTaGTTGGCTGCCAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRPFNKH*LAARLP
Trigger: AGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGG...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCTGGCTCTTTGCAGAATaGGTTCTTCAATGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSWLFAE*VLQWCL
Trigger: AAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCA...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGGAGCCTGTTATGGATaGGGGAGAGTTGGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKGACYG*GRVGSS
Trigger: CGAGCTACCAACTCTCCCGCATCCATAACAGGCTCC...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTCACGTTGTACCCGTATaGGGCATAGGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLHVVPV*GIGSCR
Trigger: TCTGCAGCTGCCTATGCCGCATACGGGTACAACGTG...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCGAACAAGGGATGTCTaGAGAGGACTGCTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSRTRDV*RGLLAE
Trigger: CTCCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCAGGGGTTGGTGCCTTTaGCCTGTTTCCGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSRGWCL*PVSGPE
Trigger: CTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCT...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCACTTCTGACTCAGGATaGAAGATGCTGCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESTSDSG*KMLHGA
Trigger: TGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGT...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR GCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGC +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRTVHLR*SGADPC
Trigger: GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGT...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGC +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESTVHLR*SGADPC
Trigger: GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGT...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGCACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGHLRRL*KGRVRA
Trigger: GGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTG...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCGCTCTTCACAGCACCTaGGGAGACTTTGCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLALHST*GDFARD
Trigger: GTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCTCTTGGTGTGAACCATaGAGGATGGGAGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTSWCEP*RMGGIA
Trigger: AGCAATTCCTCCCATCCTGCATGGTTCACACCAAGA...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGGTGCAATATAGACAGTaGATACAGCCAAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKVQYRQ*IQPSRG
Trigger: TCCCCTGCTTGGCTGTATGCACTGTCTATATTGCAC...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGTTTGTCGCAGAAAATaGTCCAACCGGAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGVCRRK*SNRRAL
Trigger: GAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAAC...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGTTTGTCGCAGAAAATaGTCCAACCGGAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRVCRRK*SNRRAL
Trigger: GAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAAC...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTTAGACACGTTGTACCCGTATGCGGCATAGGCAGCTGCAGAGGCCGCTGCAGCAAGGGATCCCCAGACTaGGGCAATAATGGATTACTG +
Preference number: 4 (lower is better)
Translates to: FRHVVPVCGIGSCRGRCSKGSPD*GNNGLL
Trigger: CAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTT...GCTGCAGCGGCCTCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGACTTGGCAAAGACTTTaGTCTGGTGGTGATGGCGAC +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRTWQRL*SGGDGD
Trigger: GTCGCCATCACCACCAGACCAAAGTCTTTGCCAAGT...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTACTTGGCAAAGACTTTaGTCTGGTGGTGATGGCGAC +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSTWQRL*SGGDGD
Trigger: GTCGCCATCACCACCAGACCAAAGTCTTTGCCAAGT...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTTCCTTACAGTTCTTCTaGGCCTGCAAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCSLQFF*ACKAAR
Trigger: TCGAGCTGCCTTGCAGGCCCAGAAGAACTGTAAGGA...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCTTGCGACTCATGAAATaGGCATACAACTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSLRLMK*AYNSVW
Trigger: CCAGACAGAGTTGTATGCCCATTTCATGAGTCGCAA...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGAAAAATTGTGGGCTGTaGAATATCCTCACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWEKNCGL*NILTSP
Trigger: CGGGCTGGTGAGGATATTCCACAGCCCACAATTTTT...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGATCTCTCTCAGCCAGATaGGCCAGAAGGGCAATGCTC +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRSLSAR*ARRAML
Trigger: GAGCATTGCCCTTCTGGCCCATCTGGCTGAGAGAGA...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGCCGTTGGATATAGTCTaGTGCAAATGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQPLDIV*CKWRKN
Trigger: GTTCTTTCTCCATTTGCACCAGACTATATCCAACGG...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTTCCTCAGGTATCTCTaGTGGCTCTCCCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSFLRYL*WLSPSG
Trigger: GCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAA...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCATCAACAAACACTGCTTaGCTGCCAGACTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSSTNTA*LPDSLL
Trigger: AAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGA...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCCTGTCCATGGCCTGCTaGTCCACAGTGGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFLSMAC*STVGFQ
Trigger: CTGGAACCCCACTGTGGACCAGCAGGCCATGGACAG...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTAGCCGAGGGAACAAATaGGATCACCAGGTTCACACC +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCSRGNK*DHQVHT
Trigger: GGTGTGAACCTGGTGATCCCATTTGTTCCCTCGGCT...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGCGTCAGCAGAGAGGTTaGAGTTATCAGCCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRRQQRG*SYQPRE
Trigger: TTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACG...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGACCACGTCCTGCAGCTaGCATTTCCTGAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPTTSCS*HFLNGN
Trigger: ATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGT...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTAAGGCTGCTGGTCATGTaGAGGTTCTTGGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVRLLVM*RFLGFP
Trigger: TGGGAATCCCAAGAACCTCCACATGACCAGCAGCCT...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCGTCCTCCAGAGGGGTTaGTGCCTTTGCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSVLQRG*CLCPVS
Trigger: GGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGAC...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGCCATCCAAAGACCACTaGCAGGTCAGGACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKPSKDH*QVRTLA
Trigger: GGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGG...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGTCAGAGCCGAAGAGTaGAATCGGGATGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSVRAEE*NRDGNS
Trigger: ACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGAC...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCCAATGATGACACTCTaGGGTTCAGAGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCPMMTL*GSETWG
Trigger: TCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTAGATGGGAGGAATTGCTaGGAACACAACTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVDGRNC*EHNCLW
Trigger: CCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATC...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGGTGAACCATGCAGGATaGGAGGAATTGCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLVNHAG*EELLGT
Trigger: TGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGTGAACCATGCAGGATaGGAGGAATTGCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLVNHAG*EELLGT
Trigger: TGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp CCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTaGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PVRGLRLGYTVH*RCSGADPCPVA
Trigger: GGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGAGGCCGTGGGACGGTaGCTGCGTTGGGCGTGGACG +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLEAVGR*LRWAWT
Trigger: CGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTC...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTCCTATTGAAGATAGCTaGCGTTTGTCGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPPIEDS*RLSQKM
Trigger: CATTTTCTGCGACAAACGTCAGCTATCTTCAATAGG...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGTCGAAGCATGTTGTaGAGTTCTTCTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSSRSML*SSSLLR
Trigger: TCTCAGCAGAGAAGAACTTCACAACATGCTTCGACT...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGTCGAAGCATGTTGTaGAGTTCTTCTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTSRSML*SSSLLR
Trigger: TCTCAGCAGAGAAGAACTTCACAACATGCTTCGACT...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGCCTTTTTCACAATGCTaGGCCATACTTTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESPFSQC*AILSCD
Trigger: GTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGG...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTATGCATCTTCATCAAATaGCCTTGTCCGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLCIFIK*PCPSLV
Trigger: CACCAAGCTCGGACAAGGTCATTTGATGAAGATGCA...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTTGCATCTTCATCAAATaGCCTTGTCCGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSCIFIK*PCPSLV
Trigger: CACCAAGCTCGGACAAGGTCATTTGATGAAGATGCA...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGCCATGTATTGCCACTTaGCCCGCTGGAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPPCIAT*PAGNTL
Trigger: TAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGG...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGACTACTCTTGAGCGCCTaGGCCTCATCCAGTACCATG +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRLLLSA*ASSSTM
Trigger: CATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAG...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGTCTGCCATGGTGTTCTaGATTGGGGTCCCGGTTAGC +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGSAMVF*IGVPVS
Trigger: GCTAACCGGGACCCCAATTCAGAACACCATGGCAGA...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGCTGGCCAAAAGTCCCTaGAGCATAAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLLAKSP*SIRFAI
Trigger: AATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAG...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKFEVPT*NHHPLN
Trigger: ATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAA...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTGCTATACAGTTCACTTaGGATGCAGTGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCAIQFT*DAVGLI
Trigger: GATCAGCCCCACTGCATCTCAAGTGAACTGTATAGC...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCAAGGTTCTCTTGGTGTaGACCATGCAGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLKVLLV*TMQDGR
Trigger: CCTCCCATCCTGCATGGTTCACACCAAGAGAACCTT...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGTTAACATTCCAGAACTaGCTGCTCCAGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRLTFQN*LLQKFH
Trigger: GTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAA...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGCATCACTTAGCAGAATaGTCTTTAGCCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRHHLAE*SLATFC
Trigger: GCAGAAAGTGGCTAAAGAGCATTCTGCTAAGTGATG...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCATGTGGAGAGCAGGCCTaGACTGTAGTACTGATATTG +
Preference number: 4 (lower is better)
Translates to: IFRCANQRLARPEVPAPPCGEQA*TVVLIL
Trigger: CAATATCAGTACTACAGTGCAGGCCTGCTCTCCACA...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTATGTGGAGAGCAGGCCTaGACTGTAGTACTGATATTG +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLCGEQA*TVVLIL
Trigger: CAATATCAGTACTACAGTGCAGGCCTGCTCTCCACA...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGTGCTCAATGGATAAGTaGTTTTTCTTAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRCSMDK*FFLVPG
Trigger: CCCTGGCACTAAGAAAAAGCACTTATCCATTGAGCA...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTTCTCTGCTCTCTTaGGGTGCTCCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESPSLLS*GAPSLL
Trigger: AAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGG...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR GCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGCCAGAAGGGCAATaGTCTGTACTGTTTTACCAA +
Preference number: 4 (lower is better)
Translates to: IFRCANQRLARPEVPAPPGPEGQ*SVLFYQ
Trigger: TTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCC...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTCACACCTTCCTAAACTaGATGACCAGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSHTFLN*MTRFMR
Trigger: CCTCATGAATCTGGTCATGCAGTTTAGGAAGGTGTG...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTGGAGGTTCTTGGGATTCCCAGCACACCTTCCTAAACTaGATGACCAGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: PESLGLGCWSCGGSWDSQHTFLN*MTRFMR
Trigger: CCTCATGAATCTGGTCATGCAGTTTAGGAAGGTGTG...CTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGCTGCACTTCGGTCATTaGAGTAAGAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPLHFGH*SKNPMA
Trigger: TGCCATTGGATTCTTACTGCAATGACCGAAGTGCAG...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGAAAATCACTGTGTCTaGAGCAGTGAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRENHCV*SSEIDT
Trigger: GGTATCAATCTCACTGCTGCAGACACAGTGATTTTC...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCCGGTACACAGTAACCTaGTTTGTCTGCCCTAAGCGG +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSRYTVT*FVCPKR
Trigger: CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCG...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTGGCTCTTTGCAGAATaGGTTCTTCAATGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSWLFAE*VLQWCL
Trigger: AAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGGTTTCCTCCTGTTaGCGTTTCTCTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CILFPLPLALFHSVGFLLLVSSC*RFSSCR
Trigger: GCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp TTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCTTTCCCGCTTCCGCTTaGGCTCTTTCACTCGGTTGG +
Preference number: 4 (lower is better)
Translates to: LRLEPSQQDIKGIQLSTVFPASA*ALSLGW
Trigger: CCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAA...GACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCTTTCCCGCTTCCGCTTaGGCTCTTTCACTCGGTTGG +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVFPASA*ALSLGW
Trigger: CCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAA...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSGMEPV*SSLLME
Trigger: CTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCCGAACAAGGGATGTCTaGAGAGGACTGCTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTRTRDV*RGLLAE
Trigger: CTCCGCCAGCAGTCCTCTGCAGACATCCCTTGTTCG...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATAGGGGTTGGTGCCTTTaGCCTGTTTCCGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYRGWCL*PVSGPE
Trigger: CTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCT...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGATGCCTGTCCTTCCCCTaGTGGACATTTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGCLSFP*WTFPLL
Trigger: CAGAAGTGGAAATGTCCAGCAGGGGAAGGACAGGCA...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGTGCCTGTCCTTCCCCTaGTGGACATTTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: SLKGLGMAESTLMKESSPCLSFP*WTFPLL
Trigger: CAGAAGTGGAAATGTCCAGCAGGGGAAGGACAGGCA...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGTCTTGGTGTGAACCATaGAGGATGGGAGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLSWCEP*RMGGIA
Trigger: AGCAATTCCTCCCATCCTGCATGGTTCACACCAAGA...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCTGCAAATCAGAGGCTTaGCCGCCCGGAGGTACCTGC +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCCKSEA*PPGGTC
Trigger: GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCA...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGCGCGATTTTCAGGTGTaGAAATCAGAGGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: CILFPLPLALFHSVGFLLRDFQV*KSEACP
Trigger: CGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCGCGATTTTCAGGTGTaGAAATCAGAGGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLRDFQV*KSEACP
Trigger: CGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCTCTTCACCTCACTCCTaGTGTCCCTTCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLSSPHS*CPFLSQ
Trigger: CTGAGAGAGGAAGGGACAGCAGGAGTGAGGTGAAGA...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACTCCCATGCAAACACTaGCCCTCTGTCTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRLPCKH*PSVSTG
Trigger: TCCAGTAGAGACAGAGGGGCAGTGTTTGCATGGGAG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCGAGAATCAGCCTCGCTaGATTCATCACTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCENQPR*IHHLAE
Trigger: TTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTC...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTAGAAAGGGTCATATGTaGAGAGCAGGCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCRKGHM*RAGLHC
Trigger: ACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCT...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GTGCCTTTACAGATGAGCCGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGTCCTTACAGTTCTTCTaGGCCTGCAAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: VPLQMSRYTVTCFVCPKRSLQFF*ACKAAR
Trigger: TCGAGCTGCCTTGCAGGCCCAGAAGAACTGTAAGGA...CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGATCCTTACAGTTCTTCTaGGCCTGCAAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGSLQFF*ACKAAR
Trigger: TCGAGCTGCCTTGCAGGCCCAGAAGAACTGTAAGGA...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTTGCGACTCATGAAATaGGCATACAACTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSLRLMK*AYNSVW
Trigger: CCAGACAGAGTTGTATGCCCATTTCATGAGTCGCAA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTACCAGCCCGGATAGATaGGTTAGCCAGGCTATAACT +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCTSPDR*VSQAIT
Trigger: AGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGT...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGTCTCTCTCAGCCAGATaGGCCAGAAGGGCAATGCTC +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGSLSAR*ARRAML
Trigger: GAGCATTGCCCTTCTGGCCCATCTGGCTGAGAGAGA...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGTGCCACTTGACCCGCTaGAAATACTTTACATCCTGC +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRCHLTR*KYFTSC
Trigger: GCAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCA...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGATTTGTTTTCGGCATaGCTCTCAATGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRDLFSA*LSMSLE
Trigger: TTCCAAGGACATTGAGAGCCATGCCGAAAACAAATC...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGCAGCTTCTGTCGGCTaGTCAGTTGGCAATACATTA +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSAASVG*SVGNTL
Trigger: TAATGTATTGCCAACTGACCAGCCGACAGAAGCTGC...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGAAAGAGCTAACCATCTaGCCAAAAGTCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKKELTI*PKVPEA
Trigger: TGCTTCAGGGACTTTTGGCCAGATGGTTAGCTCTTT...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCAAAGAGCTAACCATCTaGCCAAAAGTCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCKELTI*PKVPEA
Trigger: TGCTTCAGGGACTTTTGGCCAGATGGTTAGCTCTTT...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTVCPKR*ALSMAC
Trigger: GCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGAC...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCAGCCGAGGGAACAAATaGGATCACCAGGTTCACACC +
Preference number: 4 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSSRGNK*DHQVHT
Trigger: GGTGTGAACCTGGTGATCCCATTTGTTCCCTCGGCT...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCGTCCTCCAGAGGGGTTaGTGCCTTTGCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFVLQRG*CLCPVS
Trigger: GGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGAC...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLTLALV*LKEVGG
Trigger: CCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGT...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCCATCCAAAGACCACTaGCAGGTCAGGACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSPSKDH*QVRTLA
Trigger: GGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATGGCTGAGTCCACGGTGAACCATGCAGGATaGGAGGAATTGCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: SSLLMEISLKGLGMAESTVNHAG*EELLGT
Trigger: TGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC...CGTGGACTCAGCCATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCGCTTTCGGCTATTGGTaGGAAACAGGTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSAFGYW*ETGYEL
Trigger: CAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGC...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTATCCTGGATACCATCATaGCCCATATCTCGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVSWIPS*PISRLR
Trigger: TCGCAAACGAGATATGGGTCATGATGGTATCCAGGA...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGTGCATCTTCATCAAATaGCCTTGTCCGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRCIFIK*PCPSLV
Trigger: CACCAAGCTCGGACAAGGTCATTTGATGAAGATGCA...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTCCATGTATTGCCACTTaGCCCGCTGGAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSPCIAT*PAGNTL
Trigger: TAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGG...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGTCAAATAACTCCGGGTaGTTACACACCTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPSNNSG*LHTFLN
Trigger: GTTTAGGAAGGTGTGTAATCACCCGGAGTTATTTGA...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTGTATGCCCTTGAGACTTaGGCCGAGTCAGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: SRTSRAYSFPLSVMRLSLYALET*AESAGH
Trigger: ATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATA...CAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
CDS-3UTR TCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSFEVPT*NHHPLN
Trigger: ATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAA...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTGAGGGCTTGGCATGGCTaGGTCCACGCTAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: DHVLQLAFPEWKFHSRYLRAWHG*VHANEG
Trigger: TCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCT...CAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCTCCATTCACGGTATCTaGGACGGAGCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLSIHGI*DGACYG
Trigger: TCCATAACAGGCTCCGTCTCAGATACCGTGAATGGA...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTAGGACATTTCCACTTCTaGCTCAGGATGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVGHFHF*LRMQDA
Trigger: AGCATCTTGCATCCTGAGTCAGAAGTGGAAATGTCC...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCTGGAAACAGTATGCCTaGGCATCTAAAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSWKQYA*ASKGGL
Trigger: CAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCA...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp GATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCTACAAAGCAGGTGGATaGAAATTGGGTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: DKDPMPLRLEPSQQDIKGYKAGG*KLGLSP
Trigger: GGGAGAGAGACCCAATTTTCATCCACCTGCTTTGTA...GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR GCA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCTTAACATTCCAGAACTaGCTGCTCCAGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTLTFQN*LLQKFH
Trigger: GTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAA...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGCCTTCTCTGCTCTCTTaGGGTGCTCCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKPSLLS*GAPSLL
Trigger: AAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGG...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTTCATCCAACTTCCGCTaGTCCAAAGCTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCSSNFR*SKASFS
Trigger: AGAGAAGGAAGCTTTGGAGCAGCGGAAGTTGGATGA...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCCAGAGCCCAAAGCTCTaGCATGGTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSQSPKL*HGVLNW
Trigger: CCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTG...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTGGAGACCAAGTTTCTTaGCGTTCAAATAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCGDQVS*RSNNSG
Trigger: CCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCC...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGTCGCCTTTCATATTCTaGACTTCGGTCATTGCAGTA +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPSPFIF*TSVIAV
Trigger: TACTGCAATGACCGAAGTGCAGAATATGAAAGGCGA...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATGCAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGCCATTCAACAAACACTaGTTGGCTGCCAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: MQTLLIEVAPGLSTGFWEPFNKH*LAARLP
Trigger: AGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGG...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR GCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTAGTCCTCCAGCTCGTGTaGTTAACAGGAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVVLQLV*LTGTQR
Trigger: TCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGAC...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTGTCCTCCAGCTCGTGTaGTTAACAGGAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: FPLPLALFHSVGFLLLPFVLQLV*LTGTQR
Trigger: TCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGAC...AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCCGGTACACAGTAACCTaGTTTGTCTGCCCTAAGCGG +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVRYTVT*FVCPKR
Trigger: CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCG...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTTCTCCTTGGCTCTTTaGAGAATGCGTTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSFSLAL*RMRSSM
Trigger: CATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTTTTGGCTCCTGCCATTaGAGCAGCACTGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLFGSCH*SSTACR
Trigger: ACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAA...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCAGTCTGGGGCTAGGCTaGTGGTCATGTGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTSLGLG*WSCGGS
Trigger: AGAACCTCCACATGACCAGCAGCCTAGCCCCAGACT...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTAGGGGTTGGTGCCTTTaGCCTGTTTCCGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGRGWCL*PVSGPE
Trigger: CTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCT...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCACTCAGGATGCAAGATaGTGCACGGGGCAAGCCATC +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTTQDAR*CTGQAI
Trigger: GATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGT...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCGCTCTTCACAGCACCTaGGGAGACTTTGCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTALHST*GDFARD
Trigger: GTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CGCAGCCTCAGTTTCTTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCGTTTGTCGCAGAAAATaGTCCAACCGGAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSLSFFSNSSSSRRRLTTVCRRK*SNRRAL
Trigger: GAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAAC...GGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAAGAAAGGGTCATATGTaGAGAGCAGGCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRRKGHM*RAGLHC
Trigger: ACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCT...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGCATCGTGAGAAAACTTaGCAAAGACTTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPHREKT*QRLWSG
Trigger: ACCAGACCAAAGTCTTTGCCAAGTTTTCTCACGATG...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCAGCCGATTCCGACACTaGAACTGTAAGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: DKDPMPLRLEPSQQDIKGSRFRH*NCKRIF
Trigger: GAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCT...GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGGCAGCTTCTGTCGGCTaGTCAGTTGGCAATACATTA +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRAASVG*SVGNTL
Trigger: TAATGTATTGCCAACTGACCAGCCGACAGAAGCTGC...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACAGTTTGCCATTTCTGCTaGAGATATATCAATAAAGCG +
Preference number: 4 (lower is better)
Translates to: RCANQRLARPEVPAPPGTVCHFC*RYINKA
Trigger: CGCTTTATTGATATATCTCCAGCAGAAATGGCAAAC...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATTTCCTCAGGTATCTCTaGTGGCTCTCCCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYFLRYL*WLSPSG
Trigger: GCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAA...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCGCAGCTGCAAAGGTTTaGAAAGGAGAGTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCAAAKV*KGEWKI
Trigger: AATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGC...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGACACTGCGGTAACTCGTaGACTGGCCACACACAAAAA +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGHCGNS*TGHTQK
Trigger: TTTTTGTGTGTGGCCAGTCCACGAGTTACCGCAGTG...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GGCTCTGGGAAGAACTGTGATCGTCTATTTAGCCAGTCTGCAGCCAGTTCAGGGGAGGCTCTCCTTGCCTaGAATCCTGATGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: GSGKNCDRLFSQSAASSGEALLA*NPDERP
Trigger: TGGTCTTTCATCAGGATTCCAGGCAAGGAGAGCCTC...CCCTGAACTGGCTGCAGACTGGCTAAATAGACGATCACAGTTCTTCCCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CCA 90 bp AGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTGGCCTCTCCGAGATCTTaGATGAGCCATCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SRTSRAYSFPLSVMRLSLASPRS*MSHQAS
Trigger: TGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGC...CAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
CDS-3UTR CCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCGTCTGCCCTAAGCGGTaGGCCCTGTCCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLVCPKR*ALSMAC
Trigger: GCAGGCCATGGACAGGGCCCACCGCTTAGGGCAGAC...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATGCAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTT +
Preference number: 4 (lower is better)
Translates to: MQTLLIEVAPGLSTGFWEALSLG*FPPVAV
Trigger: AACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGC...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR CCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTT +
Preference number: 4 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLALSLG*FPPVAV
Trigger: AACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGC...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCGTCAGCAGAGAGGTTaGAGTTATCAGCCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSRQQRG*SYQPRE
Trigger: TTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTAACCACGTCCTGCAGCTaGCATTTCCTGAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVTTSCS*HFLNGN
Trigger: ATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGT...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCATGTGGAGGTTCTTaGGATTCCCAGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWESCGGS*DSQEHY
Trigger: ATAATGTTCCTGGGAATCCCAAGAACCTCCACATGA...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGAAGGCTGCTGGTCATGTaGAGGTTCTTGGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRRLLVM*RFLGFP
Trigger: TGGGAATCCCAAGAACCTCCACATGACCAGCAGCCT...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTCTGGGGCTAGGCTGCTaGTCATGTGGAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGLGLGC*SCGGSW
Trigger: CCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAG...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACTCTAGCCCTGGTTTaGTTGAAGGAAGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGTLALV*LKEVGG
Trigger: CCCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGT...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGTCAGAGCCGAAGAGTaGAATCGGGATGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRVRAEE*NRDGNS
Trigger: ACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGAC...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGACCAATGATGACACTCTaGGGTTCAGAGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRPMMTL*GSETWG
Trigger: TCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGG...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTTCCTGGTCTCTCTACTaGCTTCTGGGAGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLSWSLY*LLGVPW
Trigger: CCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGA...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGACTGTGCATTCAGGATaGGCAAAGGGGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKTVHSG*AKGTLQ
Trigger: TTGCAGAGTCCCCTTTGCCCATCCTGAATGCACAGT...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGCCTATTGAAGATAGCTaGCGTTTGTCGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRPIEDS*RLSQKM
Trigger: CATTTTCTGCGACAAACGTCAGCTATCTTCAATAGG...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAGTTTCACCAAGCAATaGATTTGGAGGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WKALHSTCGDFARDVSEPSFTKQ*IWRFFL
Trigger: AAGGAAGAACCTCCAAATTCATTGCTTGGTGAAACT...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGGCTTTCGGCTATTGGTaGGAAACAGGTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGAFGYW*ETGYEL
Trigger: CAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGC...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGCTCGTTTGCGACTCATaGAATGGGCATACAACTCTG +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKLVCDS*NGHTTL
Trigger: CAGAGTTGTATGCCCATTTCATGAGTCGCAAACGAG...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGCCATGTATTGCCACTTaGCCCGCTGGAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRPCIAT*PAGNTL
Trigger: TAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGG...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGTTGTTCTTTAGTGCCTaGTATAGCAGCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRLFFSA*YSSFCR
Trigger: CCGACAGAAGCTGCTATATCAGGCACTAAAGAACAA...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCTTGTTCTTTAGTGCCTaGTATAGCAGCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: DKDPMPLRLEPSQQDIKGLFFSA*YSSFCR
Trigger: CCGACAGAAGCTGCTATATCAGGCACTAAAGAACAA...GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCACCTGTCTCGTGAATaGTTGAAGACCCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLHLSRE*LKTLIC
Trigger: ACAGATCAGGGTCTTCAATCATTCACGAGACAGGTG...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCTGGCCAAAAGTCCCTaGAGCATAAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLLAKSP*SIRFAI
Trigger: AATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAG...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTGCAGCTCACTCTTTACAGTGGCTGCTaGAAACAAGAGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: QHVTAALVQGNGASVQLTLYSGC*KQETLT
Trigger: TGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAG...AGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGCTTTACAGTGGCTGCTaGAAACAAGAGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWELYSGC*KQETLT
Trigger: TGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAG...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGTAGCTGATCTCCGCTaGTGGACAACCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGVADLR*WTTWSE
Trigger: CTCAGACCAGGTTGTCCATCAGCGGAGATCAGCTAC...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp TGCACTTCGGTCATTGCAGTAAGAATCCAATGGCACTGCGGTAACAGGAATACAAGGACCCTATGCCCTTaGGACTTGAGCCGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CTSVIAVRIQWHCGNRNTRTLCP*DLSRVS
Trigger: GCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCT...TGTATTCCTGTTACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR TCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCTCCGAGATCTTGGATaGGCCATCAAGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSLRDLG*AIKPHV
Trigger: TACATGAGGCTTGATGGCTCATCCAAGATCTCGGAG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DKDPMPLRLEPSQQDIKGFEVPT*NHHPLN
Trigger: ATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAA...GCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCTCCATTCACGGTATCTaGGACGGAGCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSSIHGI*DGACYG
Trigger: TCCATAACAGGCTCCGTCTCAGATACCGTGAATGGA...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGCAGCTGGCATTTCCTaGATGGAAATTCCATTCACG +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGAAGIS*MEIPFT
Trigger: CGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGC...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACCCTTACTAGCCCTATaGGAAATCACACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLPLLAL*EITLLR
Trigger: TCTTAAGAGTGTGATTTCTCATAGGGCTAGTAAGGG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCAAGGTTCTCTTGGTGTaGACCATGCAGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTKVLLV*TMQDGR
Trigger: CCTCCCATCCTGCATGGTTCACACCAAGAGAACCTT...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGCTTGGCATTTTTCTaGTTCCCTCTAAATAGCATC +
Preference number: 4 (lower is better)
Translates to: IFRCANQRLARPEVPAPPGLAFF*FPLNSI
Trigger: GATGCTATTTAGAGGGAATCAGAAAAATGCCAAGCC...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTGCTCCCTTCTATGACTTaGCATGGCAGTATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRTSRAYSFPLSVMRLSLLPSMT*HGSIPA
Trigger: TGCTGGGATACTGCCATGTCAAGTCATAGAAGGGAG...CAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR GCA 90 bp GTGCCTTTACAGATGAGCCGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGACAAATCTGTCTTCATaGACAAGGACCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: VPLQMSRYTVTCFVCPKRTNLSS*TRTSDC
Trigger: GCAGTCGGAGGTCCTTGTGCATGAAGACAGATTTGT...CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACGAGCTGAAGCTTTCTaGTTATTTGCCTTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLRAEAF*LFAFGS
Trigger: ACTACCAAAGGCAAATAAGCAGAAAGCTTCAGCTCG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATGACGCACCTCCTTCATaGACTGGTGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYDAPPS*TGEQAF
Trigger: GAAAGCTTGCTCACCAGTGCATGAAGGAGGTGCGTC...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCGGGCTGAGTGACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATCCTTCTCTGCTCTCTTaGGGTGCTCCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: FGLSDHVLQLAFPEWKFHPSLLS*GAPSLL
Trigger: AAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGG...ATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTCACTCAGCCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCAAAGCTTCCTTCTCTaGTCTCTTGCGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSQSFLL*SLAVLL
Trigger: AAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGCTAGTAAACTCCTGGTaGCAATTGTTAAGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKLVNSW*QLLSVD
Trigger: GTCTACACTTAACAATTGGCACCAGGAGTTTACTAG...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGATCCAGTACCATGTATTaGCACTTGACCCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRSSTMY*HLTRWK
Trigger: TTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGA...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGACAGAGCCCAAAGCTCTaGCATGGTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRQSPKL*HGVLNW
Trigger: CCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTG...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCGGAGACCAAGTTTCTTaGCGTTCAAATAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSGDQVS*RSNNSG
Trigger: CCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCC...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp GTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCGGAGACCAAGTTTCTTaGCGTTCAAATAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: VSRTSRAYSFPLSVMRLSGDQVS*RSNNSG
Trigger: CCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCC...GGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp CAAACACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATACCATTCAACAAACACTaGTTGGCTGCCAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: QTLLGCQTPSFLQNSPFIPFNKH*LAARLP
Trigger: AGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGG...TATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR GCA 90 bp GGAAAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCGTAACCTGCTTTGTCTaGCCTAAGCGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GKLTPRRKSLFLRYLWWLVTCFV*PKRWAL
Trigger: CAGGGCCCACCGCTTAGGGCAGACAAAGCAGGTTAC...GAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp TTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTTGGCTCTTTGCAGAATaGGTTCTTCAATGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FPLPLALFHSVGFLLLPFWLFAE*VLQWCL
Trigger: AAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCA...AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATTGCCGTTTCTCTTCCTaGCGCAGCCTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYCRFSS*RSLSFF
Trigger: GAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCA...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTAGTCTGGGGCTAGGCTaGTGGTCATGTGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGSLGLG*WSCGGS
Trigger: AGAACCTCCACATGACCAGCAGCCTAGCCCCAGACT...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp TTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCTCTTTGGGTTTCAAGCTCACACCATCCACCTaGCTGTCCTTCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FSNSSSSRRRLTTSLGFKLTPST*LSFPCW
Trigger: CCAGCAGGGGAAGGACAGGCAGGTGGATGGTGTGAG...CTTGAAACCCAAAGAGGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCACCGCCCGGAGGTACCTaGTCCACCAGGGACATCAGG +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAPPGGT*STRDIR
Trigger: CCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGG...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCTCTTCACCTCACTCCTaGTGTCCCTTCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFSSPHS*CPFLSQ
Trigger: CTGAGAGAGGAAGGGACAGCAGGAGTGAGGTGAAGA...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATCTCCCATGCAAACACTaGCCCTCTGTCTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYLPCKH*PSVSTG
Trigger: TCCAGTAGAGACAGAGGGGCAGTGTTTGCATGGGAG...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCGCTCTCTGAGGCCGTaGGACGGTGACTGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGRSLRP*DGDCVG
Trigger: CCCAACGCAGTCACCGTCCCACGGCCTCAGAGAGCG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGAAGGGATCCCCAGACTaGGGCAATAATGGATTACTG +
Preference number: 4 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKKGSPD*GNNGLL
Trigger: CAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTT...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGGAGAATCAGCCTCGCTaGATTCATCACTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRENQPR*IHHLAE
Trigger: TTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTC...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGCATCGTGAGAAAACTTaGCAAAGACTTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLHREKT*QRLWSG
Trigger: ACCAGACCAAAGTCTTTGCCAAGTTTTCTCACGATG...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGATGCCACTTGACCCGCTaGAAATACTTTACATCCTGC +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGCHLTR*KYFTSC
Trigger: GCAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCA...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCTGCCACTTGACCCGCTaGAAATACTTTACATCCTGC +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSCHLTR*KYFTSC
Trigger: GCAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCA...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTATGTCGGCTGGTCAGTTaGCAATACATTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLCRLVS*QYIRIS
Trigger: TGAGATTCTAATGTATTGCCAACTGACCAGCCGACA...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTTGTCGGCTGGTCAGTTaGCAATACATTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSCRLVS*QYIRIS
Trigger: TGAGATTCTAATGTATTGCCAACTGACCAGCCGACA...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTTCAACAAACACTGCTTaGCTGCCAGACTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HCLAARLPPSFRTRLSYSSTNTA*LPDSLL
Trigger: AAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGA...AGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAATCAACAAACACTGCTTaGCTGCCAGACTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQSTNTA*LPDSLL
Trigger: AAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGA...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGGTGGGCCCTGTCCATaGCCTGCTGGTCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLGGPCP*PAGPQW
Trigger: CCACTGTGGACCAGCAGGCCATGGACAGGGCCCACC...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGTCATGTGGAGGTTCTTaGGATTCCCAGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRSCGGS*DSQEHY
Trigger: ATAATGTTCCTGGGAATCCCAAGAACCTCCACATGA...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAACTGTGCATTCAGGATaGGCAAAGGGGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQTVHSG*AKGTLQ
Trigger: TTGCAGAGTCCCCTTTGCCCATCCTGAATGCACAGT...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAACACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATATCCCAGCAGATCGTaGGTCAGAGCAAACATCTCC +
Preference number: 4 (lower is better)
Translates to: QTLLGCQTPSFLQNSPFIYPSRS*VRANIS
Trigger: GGAGATGTTTGCTCTGACCCACGATCTGCTGGGATA...TATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
3UTR CAA 72 bp ACGCTAATGAAGGAGTCATCTCCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGAACAAATGGGATCACC +
Preference number: 4 (lower is better)
Translates to: TLMKESSPSAER*ELSAEGTNGIT
Trigger: GGTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGATGACTCCTTCATTAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
3UTR CAA 72 bp GAGTCTGGGGCTAGGCTGCTGGTCATGTGGAGGTTCTaGGGATTCCCAGGAACATTATTTCCCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ESGARLLVMWRF*GFPGTLFPLLK
Trigger: TTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACCTCGTTTGCGACTCATaGAATGGGCATACAACTCTG +
Preference number: 4 (lower is better)
Translates to: ISVSREVGVISRGNKWDHLVCDS*NGHTTL
Trigger: CAGAGTTGTATGCCCATTTCATGAGTCGCAAACGAG...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGTCTGCCATGGTGTTCTaGATTGGGGTCCCGGTTAGC +
Preference number: 4 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQSAMVF*IGVPVS
Trigger: GCTAACCGGGACCCCAATTCAGAACACCATGGCAGA...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACTTTACAGTGGCTGCTaGAAACAAGAGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLLYSGC*KQETLT
Trigger: TGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CGCAGCCTCAGTTTCTTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCCTCCGAGATCTTGGATaGGCCATCAAGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: RSLSFFSNSSSSRRRLTTLRDLG*AIKPHV
Trigger: TACATGAGGCTTGATGGCTCATCCAAGATCTCGGAG...GGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTATGTCATTCCTGTTCTaGAAATCAGCAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSMSFLF*KSATMS
Trigger: AGACATGGTTGCTGATTTTCAGAACAGGAATGACAT...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGGGGCCCCATTCAACAAACACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGATGTCATTCCTGTTCTaGAAATCAGCAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: RGPIQQTLLGCQTPSFLQMSFLF*KSATMS
Trigger: AGACATGGTTGCTGATTTTCAGAACAGGAATGACAT...CTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR TCA 90 bp GGAAAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCAGGGCTTGGCATGGCTaGGTCCACGCTAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: GKLTPRRKSLFLRYLWWLRAWHG*VHANEG
Trigger: TCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCT...GAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp CTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGATGAGAAGATAGAGGGGCTTTaGCAGCTCAGTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLLGSLQNAFFNGAFTDEKIEGL*QLSAAS
Trigger: GGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTT...CTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTATGCTCAATGGATAAGTaGTTTTTCTTAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LNSAIFRCANQRLARPEVCSMDK*FFLVPG
Trigger: CCCTGGCACTAAGAAAAAGCACTTATCCATTGAGCA...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCCGACGAGCATTCAGCTaGTCAATGGATAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSRRAFS*SMDKCF
Trigger: AAAGCACTTATCCATTGAGCAGCTGAATGCTCGTCG...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCGAGCTGAAGCTTTCTaGTTATTTGCCTTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCRAEAF*LFAFGS
Trigger: ACTACCAAAGGCAAATAAGCAGAAAGCTTCAGCTCG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTCACACCTTCCTAAACTaGATGACCAGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLHTFLN*MTRFMR
Trigger: CCTCATGAATCTGGTCATGCAGTTTAGGAAGGTGTG...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGACTGCACTTCGGTCATTaGAGTAAGAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGLHFGH*SKNPMA
Trigger: TGCCATTGGATTCTTACTGCAATGACCGAAGTGCAG...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GTGCCTTTACAGATGAGCCGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGCTGCACTTCGGTCATTaGAGTAAGAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: VPLQMSRYTVTCFVCPKRLHFGH*SKNPMA
Trigger: TGCCATTGGATTCTTACTGCAATGACCGAAGTGCAG...CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTTCGCCTTTCATATTCTaGACTTCGGTCATTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCSPFIF*TSVIAV
Trigger: TACTGCAATGACCGAAGTGCAGAATATGAAAGGCGA...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGGTCCTCCAGCTCGTGTaGTTAACAGGAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGVLQLV*LTGTQR
Trigger: TCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGAC...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCGGTACACAGTAACCTaGTTTGTCTGCCCTAAGCGG +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCRYTVT*FVCPKR
Trigger: CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCG...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAAGGGATCCCCAGACTaGGGCAATAATGGATTACTG +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQKGSPD*GNNGLL
Trigger: CAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTT...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGAAAAATTGTGGGCTGTaGAATATCCTCACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGKNCGL*NILTSP
Trigger: CGGGCTGGTGAGGATATTCCACAGCCCACAATTTTT...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGCCTGTTCATATAGATTaGCCAACCAATTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: TAPAETLQGTCQSRRVESPVHID*PTNSCL
Trigger: AAGGCATGAATTGGTTGGCCAATCTATATGAACAGG...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTAATCTAGTAAACTCCTaGTGCCAATTGTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPNLVNS*CQLLSV
Trigger: TACACTTAACAATTGGCACCAGGAGTTTACTAGATT...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGCCGATTCCGACACTaGAACTGTAAGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQSRFRH*NCKRIF
Trigger: GAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCT...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCTGTCGGCTGGTCAGTTaGCAATACATTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: QTLLIEVAPGLSTGFWESCRLVS*QYIRIS
Trigger: TGAGATTCTAATGTATTGCCAACTGACCAGCCGACA...GGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR CCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGCTCACTGCTTTACAGTaGCTGCTGAAAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLKGLGMAESTLMKESSPLTALQ*LLKTRD
Trigger: GTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAG...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCCTGTCCATGGCCTGCTaGTCCACAGTGGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLLSMAC*STVGFQ
Trigger: CTGGAACCCCACTGTGGACCAGCAGGCCATGGACAG...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTGGCTCTTTCACTCGGTTaGTTTCCTCCTGTTGCCGTT +
Preference number: 4 (lower is better)
Translates to: DHVLQLAFPEWKFHSRYLALSLG*FPPVAV
Trigger: AACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGC...CAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCAGCCGAGGGAACAAATaGGATCACCAGGTTCACACC +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCSRGNK*DHQVHT
Trigger: GGTGTGAACCTGGTGATCCCATTTGTTCCCTCGGCT...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCAGCACTGCCTGCCGTaGACTTTCGGCTCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRQHCLP*TFGSGP
Trigger: AGGGCCGGAGCCGAAAGTCCACGGCAGGCAGTGCTG...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAGTCGGAGGGCCCAGATaGTTACCGTCCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAVGGPR*LPSSRG
Trigger: CCCTCTGGAGGACGGTAACCATCTGGGCCCTCCGAC...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGGAGAGGTTTAAGACTTaGCTATACAGTTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRERFKT*LYSSLE
Trigger: CTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTC...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTCTATGACTTGACATaGCAGTATCCCAGCAGATCG +
Preference number: 4 (lower is better)
Translates to: VSRTSRAYSFPLSVMRLSFYDLT*QYPSRS
Trigger: CGATCTGCTGGGATACTGCCATGTCAAGTCATAGAA...GGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR TCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCCCTTTTTCACAATGCTaGGCCATACTTTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTPFSQC*AILSCD
Trigger: GTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGG...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATCTCGTTTGCGACTCATaGAATGGGCATACAACTCTG +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYLVCDS*NGHTTL
Trigger: CAGAGTTGTATGCCCATTTCATGAGTCGCAAACGAG...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGATCAAATAACTCCGGGTaGTTACACACCTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRSNNSG*LHTFLN
Trigger: GTTTAGGAAGGTGTGTAATCACCCGGAGTTATTTGA...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTCAAATAACTCCGGGTaGTTACACACCTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: VSRTSRAYSFPLSVMRLSSNNSG*LHTFLN
Trigger: GTTTAGGAAGGTGTGTAATCACCCGGAGTTATTTGA...GGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATCACCTGTCTCGTGAATaGTTGAAGACCCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYHLSRE*LKTLIC
Trigger: ACAGATCAGGGTCTTCAATCATTCACGAGACAGGTG...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGTTAATACCTTTTCTGTaGAAGAGAGACCGTTGGATA +
Preference number: 4 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLLIPFL*KRDRWI
Trigger: TATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAA...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTATTAATACCTTTTCTGTaGAAGAGAGACCGTTGGATA +
Preference number: 4 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLLIPFL*KRDRWI
Trigger: TATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAA...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTAGTAGCTGATCTCCGCTaGTGGACAACCTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHQASCRYASCKPCIPPVVADLR*WTTWSE
Trigger: CTCAGACCAGGTTGTCCATCAGCGGAGATCAGCTAC...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLKDQPF*GLMLHR
Trigger: TCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTT...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCTCCTATGCCCTTGAGACTTaGGCCGAGTCAGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: KLTPRRKSLFLRYLWWLSYALET*AESAGH
Trigger: ATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATA...GGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp GAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCTCCCCTTCTGGCGCTCATGTCATTCCTGTTCTaGAAATCAGCAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: EGNPCSSGISGGSPLLALMSFLF*KSATMS
Trigger: AGACATGGTTGCTGATTTTCAGAACAGGAATGACAT...GAGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGTTGGTAGCTCGAGACTaGGGGGCTGAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRLVARD*GAEEAG
Trigger: CCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAA...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTTCCATTCACGGTATCTaGGACGGAGCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLSIHGI*DGACYG
Trigger: TCCATAACAGGCTCCGTCTCAGATACCGTGAATGGA...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATGCAGCTGGCATTTCCTaGATGGAAATTCCATTCACG +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYAAGIS*MEIPFT
Trigger: CGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGC...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACCCTTACTAGCCCTATaGGAAATCACACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRPLLAL*EITLLR
Trigger: TCTTAAGAGTGTGATTTCTCATAGGGCTAGTAAGGG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCGGCTTGGCATTTTTCTaGTTCCCTCTAAATAGCATC +
Preference number: 4 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSGLAFF*FPLNSI
Trigger: GATGCTATTTAGAGGGAATCAGAAAAATGCCAAGCC...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCATCACTTAGCAGAATaGTCTTTAGCCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLHHLAE*SLATFC
Trigger: GCAGAAAGTGGCTAAAGAGCATTCTGCTAAGTGATG...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCCGACGAGCATTCAGCTaGTCAATGGATAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVRRAFS*SMDKCF
Trigger: AAAGCACTTATCCATTGAGCAGCTGAATGCTCGTCG...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGATTAACAAAGGGCAGCTaGAAAGGTTTGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRLTKGS*KGLERR
Trigger: TCTCCTTTCCAAACCTTTGCAGCTGCCCTTTGTTAA...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTCTGCACTTCGGTCATTaGAGTAAGAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: HCLAARLPPSFRTRLSYSLHFGH*SKNPMA
Trigger: TGCCATTGGATTCTTACTGCAATGACCGAAGTGCAG...AGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR GCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGTTCTCCTTGGCTCTTTaGAGAATGCGTTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: SLKGLGMAESTLMKESSPFSLAL*RMRSSM
Trigger: CATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAA...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCACAGTTCACTTGAGATaGAGTGGGGCTGATCCATGC +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCTVHLR*SGADPC
Trigger: GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGT...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGCATACAACTCTGTCTaGGTAATTAAGAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSAYNSV*VIKKLS
Trigger: ACTCAACTTCTTAATTACCCAGACAGAGTTGTATGC...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCAGCCGATTCCGACACTaGAACTGTAAGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTSRFRH*NCKRIF
Trigger: GAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCT...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CGCAGCCTCAGTTTCTTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCGCAGCTTCTGTCGGCTaGTCAGTTGGCAATACATTA +
Preference number: 4 (lower is better)
Translates to: RSLSFFSNSSSSRRRLTTAASVG*SVGNTL
Trigger: TAATGTATTGCCAACTGACCAGCCGACAGAAGCTGC...GGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGTTTGCCATTTCTGCTaGAGATATATCAATAAAGCG +
Preference number: 4 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSVCHFC*RYINKA
Trigger: CGCTTTATTGATATATCTCCAGCAGAAATGGCAAAC...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTGAAAGAGCTAACCATCTaGCCAAAAGTCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SRTSRAYSFPLSVMRLSLKELTI*PKVPEA
Trigger: TGCTTCAGGGACTTTTGGCCAGATGGTTAGCTCTTT...CAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGCTGGCATTTCCTGAATaGAAATTCCATTCACGGTAT +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRLAFPE*KFHSRY
Trigger: ATACCGTGAATGGAATTTCCATTCAGGAAATGCCAG...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCTGGCATTTCCTGAATaGAAATTCCATTCACGGTAT +
Preference number: 4 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCLAFPE*KFHSRY
Trigger: ATACCGTGAATGGAATTTCCATTCAGGAAATGCCAG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGTGCTTCCTGAACCTTTaGGGCGGCCTCGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRCFLNL*GGLGFG
Trigger: CCCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCA...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGATCATGTGGAGGTTCTTaGGATTCCCAGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGSCGGS*DSQEHY
Trigger: ATAATGTTCCTGGGAATCCCAAGAACCTCCACATGA...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCGAGAAATCTCTACCATaGAAGGCTCTTCACAGCACC +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTEKSLP*KALHST
Trigger: GGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTC...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTGGAGAAATCTCTACCATaGAAGGCTCTTCACAGCACC +
Preference number: 4 (lower is better)
Translates to: DHVLQLAFPEWKFHSRYLEKSLP*KALHST
Trigger: GGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTC...CAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCATGGGAGTCCCCTGGGTaGAAGGTGCTACGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAWESPG*KVLRLL
Trigger: CAGCAACCGTAGCACCTTCCACCCAGGGGACTCCCA...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCTCCGGCTCTCCTTGCTCGTaGACTGGCCACACACAAAAA +
Preference number: 4 (lower is better)
Translates to: KLTPRRKSLFLRYLWWLSGSPCS*TGHTQK
Trigger: TTTTTGTGTGTGGCCAGTCCACGAGCAAGGAGAGCC...GGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGACCTATTGAAGATAGCTaGCGTTTGTCGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRPIEDS*RLSQKM
Trigger: CATTTTCTGCGACAAACGTCAGCTATCTTCAATAGG...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCAGTTTCACCAAGCAATaGATTTGGAGGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSSFTKQ*IWRFFL
Trigger: AAGGAAGAACCTCCAAATTCATTGCTTGGTGAAACT...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACAAACAGGTTACGAGCTaGAGCTTTCTGCTTATTTGC +
Preference number: 4 (lower is better)
Translates to: ISVSREVGVISRGNKWDHKQVTS*SFLLIC
Trigger: GCAAATAAGCAGAAAGCTTCAGCTCGTAACCTGTTT...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCACCTGTCTCGTGAATaGTTGAAGACCCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCHLSRE*LKTLIC
Trigger: ACAGATCAGGGTCTTCAATCATTCACGAGACAGGTG...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGTTAATACCTTTTCTGTaGAAGAGAGACCGTTGGATA +
Preference number: 4 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRLIPFL*KRDRWI
Trigger: TATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAA...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTCTGGCCAAAAGTCCCTaGAGCATAAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGLAKSP*SIRFAI
Trigger: AATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAG...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCAGCGAGGAGGTAGCTaGTCTCCGCTGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGQRGGS*SPLMDN
Trigger: GTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGATGTCATTCCTGTTCTaGAAATCAGCAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: CILFPLPLALFHSVGFLLMSFLF*KSATMS
Trigger: AGACATGGTTGCTGATTTTCAGAACAGGAATGACAT...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAATGTCATTCCTGTTCTaGAAATCAGCAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRMSFLF*KSATMS
Trigger: AGACATGGTTGCTGATTTTCAGAACAGGAATGACAT...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATTTTGAAGTTCCCACCTaGAATCACCATCCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYFEVPT*NHHPLN
Trigger: ATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAA...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp TACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTGCCTGGAATCCTGATGAAATCTCTCTCCCTTCTATaGCTTGACATGGCAGTATCC +
Preference number: 4 (lower is better)
Translates to: YSFPLSVMRLSLPGILMKSLSLL*LDMAVS
Trigger: GGATACTGCCATGTCAAGTCATAGAAGGGAGAGAGA...TTTCATCAGGATTCCAGGCAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR GCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCGAGCTGAAGCTTTCTaGTTATTTGCCTTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSRAEAF*LFAFGS
Trigger: ACTACCAAAGGCAAATAAGCAGAAAGCTTCAGCTCG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGATGGCCAACCAATTCATaGCTTTCAGTTGATAACCTT +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGWPTNS*LSVDNL
Trigger: AAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCA...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCCTAGTAAACTCCTGGTaGCAATTGTTAAGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSLVNSW*QLLSVD
Trigger: GTCTACACTTAACAATTGGCACCAGGAGTTTACTAG...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCTCCAGTACCATGTATTaGCACTTGACCCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCSSTMY*HLTRWK
Trigger: TTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGA...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCTTAACAAAGGGCAGCTaGAAAGGTTTGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRLEPSQQDIKGIQLSTVLTKGS*KGLERR
Trigger: TCTCCTTTCCAAACCTTTGCAGCTGCCCTTTGTTAA...GACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCGAAAATCACTGTGTCTaGAGCAGTGAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSENHCV*SSEIDT
Trigger: GGTATCAATCTCACTGCTGCAGACACAGTGATTTTC...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTATGCCGTTTCTCTTCCTaGCGCAGCCTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SHQASCRYASCKPCIPPVCRFSS*RSLSFF
Trigger: GAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCA...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCTTGGTTTCCTCCTGTTaGCGTTTCTCTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTLVSSC*RFSSCR
Trigger: GCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCCAGCATGTCACTGCTaGTCTCGTCCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGPACHC*SRPGEW
Trigger: CCATTCCCCTGGACGAGAGCAGCAGTGACATGCTGG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTAGTGGGGCTGATCCATaGCCTGTGGCCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLSGADP*PVAFLL
Trigger: TAGGAGGAAGGCCACAGGGCATGGATCAGCCCCACT...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCGGTCTGTGTCAGGCTTaGCCCGTGAGAGGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTGLCQA*PVRGLR
Trigger: TCTTAAACCTCTCACGGGGCAAGCCTGACACAGACC...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTCACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLHLRRL*KGRVRA
Trigger: GGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTG...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCACCTGCGGAGACTTTaGAAGGGACGTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGHLRRL*KGRVRA
Trigger: GGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCCAGGATGGGAGGAATTaGTGGGAACACAACTGCCTG +
Preference number: 4 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTQDGRN*WEHNCL
Trigger: CAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTG...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGATGAGACTTGGCAAAGACTTTaGTCTGGTGGTGATGGCGAC +
Preference number: 4 (lower is better)
Translates to: LLLGSLQNAFFNGAFTDETWQRL*SGGDGD
Trigger: GTCGCCATCACCACCAGACCAAAGTCTTTGCCAAGT...CTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACCTGTTCATATAGATTaGCCAACCAATTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRPVHID*PTNSCL
Trigger: AAGGCATGAATTGGTTGGCCAATCTATATGAACAGG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGACCTGTTCATATAGATTaGCCAACCAATTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGPVHID*PTNSCL
Trigger: AAGGCATGAATTGGTTGGCCAATCTATATGAACAGG...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCGATTTGTTTTCGGCATaGCTCTCAATGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSDLFSA*LSMSLE
Trigger: TTCCAAGGACATTGAGAGCCATGCCGAAAACAAATC...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTGATTTGTTTTCGGCATaGCTCTCAATGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLHTFPASACALSLGWFPDLFSA*LSMSLE
Trigger: TTCCAAGGACATTGAGAGCCATGCCGAAAACAAATC...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCCCTGCTGGTCCACAGTaGGGTTCCAGTCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLPAGPQ*GSSRYH
Trigger: ATGATAGCGACTGGAACCCCACTGTGGACCAGCAGG...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCATCCTGGTCTCTCTACTaGCTTCTGGGAGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTASWSLY*LLGVPW
Trigger: CCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGA...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CACTGCTTGGCTGCCAGACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTGGAATACAAAGCAGGTaGATGAAAATTGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HCLAARLPPSFRTRLSYSGIQSR*MKIGSL
Trigger: GAGAGACCCAATTTTCATCCACCTGCTTTGTATTCC...AGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR TCA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCAGTTTCACCAAGCAATaGATTTGGAGGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: APDETQMIKVLTPSTCLSSFTKQ*IWRFFL
Trigger: AAGGAAGAACCTCCAAATTCATTGCTTGGTGAAACT...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAACTTTGGTCTGGTGGTaGTGGCGACGAGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTATLVWW*WRRGDS
Trigger: AGAATCCCCTCGTCGCCATCACCACCAGACCAAAGT...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCTCCTTCATGCACTGGTaGGCAAGCTTTCGGCTATTG +
Preference number: 4 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTSFMHW*ASFRLL
Trigger: CAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGA...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTAATACCTTTTCTGTaGAAGAGAGACCGTTGGATA +
Preference number: 4 (lower is better)
Translates to: CILFPLPLALFHSVGFLLLIPFL*KRDRWI
Trigger: TATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAA...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTACTCCGAGATCTTGGATaGGCCATCAAGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: SHQASCRYASCKPCIPPVLRDLG*AIKPHV
Trigger: TACATGAGGCTTGATGGCTCATCCAAGATCTCGGAG...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
CDS-3UTR GCA 90 bp CTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGATGAGGGGCCAGAAGGGCAATaGTCTGTACTGTTTTACCAA +
Preference number: 4 (lower is better)
Translates to: LLLGSLQNAFFNGAFTDEGPEGQ*SVLFYQ
Trigger: TTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCC...CTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCCTAGTAAACTCCTGGTaGCAATTGTTAAGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVLVNSW*QLLSVD
Trigger: GTCTACACTTAACAATTGGCACCAGGAGTTTACTAG...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGCTAGTAAACTCCTGGTaGCAATTGTTAAGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGLVNSW*QLLSVD
Trigger: GTCTACACTTAACAATTGGCACCAGGAGTTTACTAG...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTGCACTTCGGTCATTGCTCGCCTTTCATATTCTaGACTTCGGTCATTGCAGTA +
Preference number: 4 (lower is better)
Translates to: DSLLPSELAFHILHFGHCSPFIF*TSVIAV
Trigger: TACTGCAATGACCGAAGTGCAGAATATGAAAGGCGA...GCAATGACCGAAGTGCAGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR GCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATTTCTCCTTGGCTCTTTaGAGAATGCGTTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYFSLAL*RMRSSM
Trigger: CATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAA...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCACACGTTGTACCCGTATaGGGCATAGGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAHVVPV*GIGSCR
Trigger: TCTGCAGCTGCCTATGCCGCATACGGGTACAACGTG...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTCACGTTGTACCCGTATaGGGCATAGGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLHVVPV*GIGSCR
Trigger: TCTGCAGCTGCCTATGCCGCATACGGGTACAACGTG...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCACAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAQDARC*TGQAIQ
Trigger: TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTG...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCAGGATGCAAGATGCTaGACGGGGCAAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGQDARC*TGQAIQ
Trigger: TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGGTGCAATATAGACAGTaGATACAGCCAAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQVQYRQ*IQPSRG
Trigger: TCCCCTGCTTGGCTGTATGCACTGTCTATATTGCAC...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATCATCGTGAGAAAACTTaGCAAAGACTTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYHREKT*QRLWSG
Trigger: ACCAGACCAAAGTCTTTGCCAAGTTTTCTCACGATG...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CGCAGCCTCAGTTTCTTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCGATTTGTTTTCGGCATaGCTCTCAATGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSLSFFSNSSSSRRRLTTDLFSA*LSMSLE
Trigger: TTCCAAGGACATTGAGAGCCATGCCGAAAACAAATC...GGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp GACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTGCCGTTGGATATAGTCTaGTGCAAATGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: DHVLQLAFPEWKFHSRYLPLDIV*CKWRKN
Trigger: GTTCTTTCTCCATTTGCACCAGACTATATCCAACGG...CAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGGTTTGCCATTTCTGCTaGAGATATATCAATAAAGCG +
Preference number: 4 (lower is better)
Translates to: SLKGLGMAESTLMKESSPVCHFC*RYINKA
Trigger: CGCTTTATTGATATATCTCCAGCAGAAATGGCAAAC...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTAAAGAGCTAACCATCTaGCCAAAAGTCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLKELTI*PKVPEA
Trigger: TGCTTCAGGGACTTTTGGCCAGATGGTTAGCTCTTT...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTCAGGTATCTCTGGTaGCTCTCCCCTTCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRLRYLW*LSPSGA
Trigger: AGCGCCAGAAGGGGAGAGCCACCAGAGATACCTGAG...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCAGCCGAGGGAACAAATaGGATCACCAGGTTCACACC +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLSRGNK*DHQVHT
Trigger: GGTGTGAACCTGGTGATCCCATTTGTTCCCTCGGCT...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGACTGGCATTTCCTGAATaGAAATTCCATTCACGGTAT +
Preference number: 4 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRLAFPE*KFHSRY
Trigger: ATACCGTGAATGGAATTTCCATTCAGGAAATGCCAG...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTGGGGCTAGGCTGCTaGTCATGTGGAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRLGLGC*SCGGSW
Trigger: CCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAG...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCGAGAGGTTTAAGACTTaGCTATACAGTTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVERFKT*LYSSLE
Trigger: CTCAAGTGAACTGTATAGCCAAGTCTTAAACCTCTC...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
3UTR CAA 72 bp CACCATCCGCTGAATCTCACTCTTCTCCTTGGCTCTTaGCAGAATGCGTTCTTCAATGGTGCCTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: HHPLNLTLLLGS*QNAFFNGAFTD
Trigger: ATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGGATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGGGGGAGGTGCATCGTaGGAAAACTTGGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLGGGAS*ENLAKT
Trigger: AGTCTTTGCCAAGTTTTCTCACGATGCACCTCCCCC...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCAAACAGGTTACGAGCTaGAGCTTTCTGCTTATTTGC +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCKQVTS*SFLLIC
Trigger: GCAAATAAGCAGAAAGCTTCAGCTCGTAACCTGTTT...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCGCTTTCGGCTATTGGTaGGAAACAGGTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLAFGYW*ETGYEL
Trigger: CAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGC...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTACTCTTGAGCGCCTaGGCCTCATCCAGTACCATG +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRLLLSA*ASSSTM
Trigger: CATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAG...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCCTGGCCAAAAGTCCCTaGAGCATAAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTLAKSP*SIRFAI
Trigger: AATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAG...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR TCA 90 bp GACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTGCTTTACAGTGGCTGCTaGAAACAAGAGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: DHVLQLAFPEWKFHSRYLLYSGC*KQETLT
Trigger: TGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAG...CAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR TCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGAGGGCTTGGCATGGCTaGGTCCACGCTAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRRAWHG*VHANEG
Trigger: TCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCT...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAAGGAGAAGAGGCGCTTaGAGGTCCAAAGTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTARRRGA*RSKVSK
Trigger: CTTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCT...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCGCTATACAGTTCACTTaGGATGCAGTGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLAIQFT*DAVGLI
Trigger: GATCAGCCCCACTGCATCTCAAGTGAACTGTATAGC...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTCATCACTTAGCAGAATaGTCTTTAGCCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLHHLAE*SLATFC
Trigger: GCAGAAAGTGGCTAAAGAGCATTCTGCTAAGTGATG...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGGCCAACCAATTCATaGCTTTCAGTTGATAACCTT +
Preference number: 4 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTWPTNS*LSVDNL
Trigger: AAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCA...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp GGTTTAAGACTTGGCTATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCTTAACAAAGGGCAGCTaGAAAGGTTTGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRLGYTVHLRCSGADPCLTKGS*KGLERR
Trigger: TCTCCTTTCCAAACCTTTGCAGCTGCCCTTTGTTAA...GCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCCAAGTCTTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGAAAATCACTGTGTCTaGAGCAGTGAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGENHCV*SSEIDT
Trigger: GGTATCAATCTCACTGCTGCAGACACAGTGATTTTC...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGTTTCCCGCTTCCGCTTaGGCTCTTTCACTCGGTTGG +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRFPASA*ALSLGW
Trigger: CCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAA...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAGGTCTGTGTCAGGCTTaGCCCGTGAGAGGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAGLCQA*PVRGLR
Trigger: TCTTAAACCTCTCACGGGGCAAGCCTGACACAGACC...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCAGGATGGGAGGAATTaGTGGGAACACAACTGCCTG +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGQDGRN*WEHNCL
Trigger: CAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATGCAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGAATCTAGTAAACTCCTaGTGCCAATTGTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: MQTLLIEVAPGLSTGFWENLVNS*CQLLSV
Trigger: TACACTTAACAATTGGCACCAGGAGTTTACTAGATT...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR CCA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTAATCTAGTAAACTCCTaGTGCCAATTGTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLNLVNS*CQLLSV
Trigger: TACACTTAACAATTGGCACCAGGAGTTTACTAGATT...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTCCCAAAGCTCTGCCATaGTGTTCTGAATTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLPKALP*CSELGS
Trigger: GGACCCCAATTCAGAACACCATGGCAGAGCTTTGGG...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTCCGTTGGATATAGTCTaGTGCAAATGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLPLDIV*CKWRKN
Trigger: GTTCTTTCTCCATTTGCACCAGACTATATCCAACGG...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACGTTTGCCATTTCTGCTaGAGATATATCAATAAAGCG +
Preference number: 4 (lower is better)
Translates to: ISVSREVGVISRGNKWDHVCHFC*RYINKA
Trigger: CGCTTTATTGATATATCTCCAGCAGAAATGGCAAAC...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAGATGGGAGGAATTGCTaGGAACACAACTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTADGRNC*EHNCLW
Trigger: CCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATC...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp TGCACTTCGGTCATTGCAGTAAGAATCCAATGGCACTGCGGTAACAGGAATACACAGGTGGATGAAAATTaGGTCTCTCTCCCTTCTATG +
Preference number: 4 (lower is better)
Translates to: CTSVIAVRIQWHCGNRNTQVDEN*VSLPSM
Trigger: CATAGAAGGGAGAGAGACCCAATTTTCATCCACCTG...TGTATTCCTGTTACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR TCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTTCATCGTCTTCACTCTaGGAATCAGCCTCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLSSSSL*ESASLD
Trigger: ATCCAGCGAGGCTGATTCTCAGAGTGAAGACGATGA...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTTCCTTCATGCACTGGTaGGCAAGCTTTCGGCTATTG +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLSFMHW*ASFRLL
Trigger: CAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGA...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp CAAAAGTCCCTGAAGCATAAGGTTTGCCATTTCTGCTGGAGATATATCAATAAATCTGCCATGGTGTTCTaGATTGGGGTCCCGGTTAGC +
Preference number: 4 (lower is better)
Translates to: QKSLKHKVCHFCWRYINKSAMVF*IGVPVS
Trigger: GCTAACCGGGACCCCAATTCAGAACACCATGGCAGA...TTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGGACGCACCTCCTTCATaGACTGGTGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRDAPPS*TGEQAF
Trigger: GAAAGCTTGCTCACCAGTGCATGAAGGAGGTGCGTC...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCAAAGCTTCCTTCTCTaGTCTCTTGCGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGQSFLL*SLAVLL
Trigger: AAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp CAAAAGTCCCTGAAGCATAAGGTTTGCCATTTCTGCTGGAGATATATCAATAAAGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: QKSLKHKVCHFCWRYINKGMEPV*SSLLME
Trigger: CTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC...TTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTGCTGGGAACACAACTaGCTGTGGATAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGCWEHN*LWIDFL
Trigger: GAGGAAGTCTATCCACAGGCAGTTGTGTTCCCAGCA...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCAGAAAGGGTCATATGTaGAGAGCAGGCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGRKGHM*RAGLHC
Trigger: ACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCT...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCGCATACAACTCTGTCTaGGTAATTAAGAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFAYNSV*VIKKLS
Trigger: ACTCAACTTCTTAATTACCCAGACAGAGTTGTATGC...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CCA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGCCGTTGGATATAGTCTaGTGCAAATGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQPLDIV*CKWRKN
Trigger: GTTCTTTCTCCATTTGCACCAGACTATATCCAACGG...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGGCAGCTGCAAAGGTTTaGAAAGGAGAGTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQAAAKV*KGEWKI
Trigger: AATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGC...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAGAGGCTCTCCTTGCCTaGAATCCTGATGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAEALLA*NPDERP
Trigger: TGGTCTTTCATCAGGATTCCAGGCAAGGAGAGCCTC...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGGCCTCTCCGAGATCTTaGATGAGCCATCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRASPRS*MSHQAS
Trigger: TGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGC...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AGCAGATTTGTTTTCGGCATGGCTCTCAATGTCCTTGGAAAACCATTCATTAAAGCCTCTCCGAGATCTTaGATGAGCCATCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SRFVFGMALNVLGKPFIKASPRS*MSHQAS
Trigger: TGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGC...TTTAATGAATGGTTTTCCAAGGACATTGAGAGCCATGCCGAAAACAAATCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp ACATCTTTCTTGATTCTCCTCAGCATAAATGGCTTCAAAATCATGTGTAAGCGACCTGCTGGTCCACAGTaGGGTTCCAGTCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: TSFLILLSINGFKIMCKRPAGPQ*GSSRYH
Trigger: ATGATAGCGACTGGAACCCCACTGTGGACCAGCAGG...TCGCTTACACATGATTTTGAAGCCATTTATGCTGAGGAGAATCAAGAAAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp AGAAAGTTGATTCTCATCAATAGCAGATTTGTTTTCGGCATGGCTCTCAATGTCCGTCAGCAGAGAGGTTaGAGTTATCAGCCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RKLILINSRFVFGMALNVRQQRG*SYQPRE
Trigger: TTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACG...GACATTGAGAGCCATGCCGAAAACAAATCTGCTATTGATGAGAATCAACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR TCA 90 bp TCATCAATAGCAGATTTGTTTTCGGCATGGCTCTCAATGTCCTTGGAAAACCATCACCTGTCTCGTGAATaGTTGAAGACCCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: SSIADLFSAWLSMSLENHHLSRE*LKTLIC
Trigger: ACAGATCAGGGTCTTCAATCATTCACGAGACAGGTG...ATGGTTTTCCAAGGACATTGAGAGCCATGCCGAAAACAAATCTGCTATTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR GCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAACAAATCTGTCTTCATaGACAAGGACCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTATNLSS*TRTSDC
Trigger: GCAGTCGGAGGTCCTTGTGCATGAAGACAGATTTGT...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTACAAATCTGTCTTCATaGACAAGGACCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLTNLSS*TRTSDC
Trigger: GCAGTCGGAGGTCCTTGTGCATGAAGACAGATTTGT...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGTTGAGTTTTCGCTGTTaGCTCTTGGCCTCCCGCATT +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRLSFRC*LLASRI
Trigger: AATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAA...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGTGGCCAACCAATTCATaGCTTTCAGTTGATAACCTT +
Preference number: 4 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQWPTNS*LSVDNL
Trigger: AAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCA...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGGAGACCAAGTTTCTTaGCGTTCAAATAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLGDQVS*RSNNSG
Trigger: CCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCC...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCTCGCCTTTCATATTCTaGACTTCGGTCATTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTSPFIF*TSVIAV
Trigger: TACTGCAATGACCGAAGTGCAGAATATGAAAGGCGA...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGTGCTGGGAACACAACTaGCTGTGGATAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRCWEHN*LWIDFL
Trigger: GAGGAAGTCTATCCACAGGCAGTTGTGTTCCCAGCA...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTAAAAATTGTGGGCTGTaGAATATCCTCACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLKNCGL*NILTSP
Trigger: CGGGCTGGTGAGGATATTCCACAGCCCACAATTTTT...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp CAAAAGTCCCTGAAGCATAAGGTTTGCCATTTCTGCTGGAGATATATCAATAAACCCAAAGCTCTGCCATaGTGTTCTGAATTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QKSLKHKVCHFCWRYINKPKALP*CSELGS
Trigger: GGACCCCAATTCAGAACACCATGGCAGAGCTTTGGG...TTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTATGTCGGCTGGTCAGTTaGCAATACATTAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: SHQASCRYASCKPCIPPVCRLVS*QYIRIS
Trigger: TGAGATTCTAATGTATTGCCAACTGACCAGCCGACA...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTAGCAGCTGCAAAGGTTTaGAAAGGAGAGTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: SHQASCRYASCKPCIPPVAAAKV*KGEWKI
Trigger: AATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGC...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCACTGCGGTAACTCGTaGACTGGCCACACACAAAAA +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRHCGNS*TGHTQK
Trigger: TTTTTGTGTGTGGCCAGTCCACGAGTTACCGCAGTG...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCGGCTTGGCATTTTTCTaGTTCCCTCTAAATAGCATC +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLGLAFF*FPLNSI
Trigger: GATGCTATTTAGAGGGAATCAGAAAAATGCCAAGCC...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTAACATTCCAGAACTaGCTGCTCCAGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLLTFQN*LLQKFH
Trigger: GTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAA...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCGACGAGCATTCAGCTaGTCAATGGATAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGRRAFS*SMDKCF
Trigger: AAAGCACTTATCCATTGAGCAGCTGAATGCTCGTCG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGAGCCGATTCCGACACTaGAACTGTAAGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRSRFRH*NCKRIF
Trigger: GAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCT...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTCTCACTGCTTTACAGTaGCTGCTGAAAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: INLSKLNSAIFRCANQRLLTALQ*LLKTRD
Trigger: GTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAG...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR TCA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAAAACAGGTTACGAGCTaGAGCTTTCTGCTTATTTGC +
Preference number: 4 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAKQVTS*SFLLIC
Trigger: GCAAATAAGCAGAAAGCTTCAGCTCGTAACCTGTTT...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGGAGAATCAGCCTCGCTaGATTCATCACTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRENQPR*IHHLAE
Trigger: TTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTC...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR GCA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGTTAACAAAGGGCAGCTaGAAAGGTTTGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KINLSKLNSAIFRCANQRLTKGS*KGLERR
Trigger: TCTCCTTTCCAAACCTTTGCAGCTGCCCTTTGTTAA...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CCA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCGCATACAACTCTGTCTaGGTAATTAAGAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGAYNSV*VIKKLS
Trigger: ACTCAACTTCTTAATTACCCAGACAGAGTTGTATGC...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS TCA 90 bp CTCGCTCCCTCCGCGGCTCCTGGGACCCCAAGATGGCGGCGGCGCTaGGGCGGCTGCGGGCGCTGGGCCGGCGGCGGCGGCGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: LAPSAAPGTPRWRRR*GGCGRWAGGGGGHF
Trigger: AAAGTGGCCGCCGCCGCCGCCGGCCCAGCGCCCGCAGCCGCCTCAGCGCCGCCGCCATCTTGGGGTCCCAGGAGCCGCGGAGGGAGCGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648947.1
CDS TCA 90 bp CGCCGACGGTGGAGCCGCGGTTCGCTCTCTGAGGCCGTGGGACGGTaGCTGCGTTGGGCGTGGACGCTCCTAGCTCGCTCCCTCCGCGGC +
Preference number: 5 (lower is better)
Translates to: RRRWSRGSLSEAVGR*LRWAWTLLARSLRG
Trigger: GCCGCGGAGGGAGCGAGCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTCAGAGAGCGAACCGCGGCTCCACCGTCGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR CAA 90 bp AAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGTGCTTCCTGAACCTTaGGGGCGGCCTCGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: KSEACPPGGTCSTRDIRQVLPEP*GRPRLR
Trigger: CCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCAC...CTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGTTTTCCCGCTTCCGCTaGCGCTCTTTCACTCGGTTG +
Preference number: 5 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEFSRFR*RSFTRL
Trigger: CAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAA...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGGACGGTGACTGCGTaGGGCGTGGACGCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: TAPAETLQGTCQSRRVESGTVTA*GVDAPS
Trigger: GCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCC...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGGGACGGTGACTGCGTaGGGCGTGGACGCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLGTVTA*GVDAPS
Trigger: GCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCC...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CAGCATGTCACTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTGCAGCTCACTGTGCTTCCTGAACCTTaGGGGCGGCCTCGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: QHVTAALVQGNGASVQLTVLPEP*GRPRLR
Trigger: CCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCAC...AGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGTGACATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp CTGCCCCTCTGTCTCTACTGGAGGGCAGCAAGCTCAGGCTGGCCGGGCTGGGAGTGGAAGGTGCTACGGTaGCTGGTAGGATCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: LPLCLYWRAASSGWPGWEWKVLR*LVGSEG
Trigger: ACCTTCAGATCCTACCAGCAACCGTAGCACCTTCCA...CTCCCAGCCCGGCCAGCCTGAGCTTGCTGCCCTCCAGTAGAGACAGAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGGGGACGGTGACTGCGTaGGGCGTGGACGCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRGTVTA*GVDAPS
Trigger: GCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCC...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGGCTGCAGCCCCGGCTTaGGCTCCTGCCATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLAAAPA*APAIAA
Trigger: TGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGC...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGGCTGCAGCCCCGGCTTaGGCTCCTGCCATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRAAAPA*APAIAA
Trigger: TGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGC...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGGTGCAAATCAGAGGCTaGCCCGCCCGGAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWEVQIRG*PARRYL
Trigger: CAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCAC...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS GCA 90 bp GTCCAACCGGAGGGCCCTCTCCAAGTACTGAAGATAGAGGGGCTTTaGCAGCTCAGTGCAGCCTCCATCATCCCTGGCACCCAACTCCGA +
Preference number: 5 (lower is better)
Translates to: VQPEGPLQVLKIEGL*QLSAASIIPGTQLR
Trigger: TCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTTCAGTACTTGGAGAGGGCCCTCCGGTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCAGGGACAGGCAGGCAGCTGCAAAGGTTaGGAAAGGAGAGTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: ACPPGGTCSTRDIRQGQAGSCKG*ERRVEN
Trigger: ATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGCC...TGCCTGTCCCTGCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTGAGGGGTTGGTGCCTTaGCCCTGTTTCCGGACCAGA +
Preference number: 5 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSEGLVP*PCFRTR
Trigger: TCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTC...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGCTAGCCCTGGTTTGGTaGAAGGAAGTCGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWELALVW*KEVGGP
Trigger: GGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAG...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS GCA 90 bp TCTGGGGCTAGGCTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATG +
Preference number: 5 (lower is better)
Translates to: SGARLLLSSRGMEPV*SSLLMEISLKGLGM
Trigger: CATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGCCTAGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616814.4
CDS-3UTR CAA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCCTTCTCTGCTCTCTaGCGGTGCTCCTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: RCANQRLARPEVPAPPGTSFSAL*RCSFST
Trigger: AGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGA...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAGGCTGTCCTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGAACCCAGTGCCAGACTaGTTTGCTGCCCGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: EAVLLIEVAPGLSTGFWENPVPD*FAARRA
Trigger: TGCCCTACGGGCAGCAAACAAGTCTGGCACTGGGTT...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCCGCCTCTCCGAGATCTaGGATGAGCCATCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTRLSEI*DEPSSL
Trigger: GAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCG...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCGGCTATACAGTTCACTaGAGATGCAGTGGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGGYTVH*RCSGAD
Trigger: ATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCC...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: TAPAETLQGTCQSRRVESAPAET*QGTCQS
Trigger: GCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGC...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTTTCGCTGTTGCCTCTaGGCCTCCCGCATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCFRCCL*ASRISS
Trigger: TGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAA...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTGGTGTTCTGTGCTaGTTGGGTAGAGCCCATAGA +
Preference number: 5 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPGGVLC*LGRAHR
Trigger: TCTATGGGCTCTACCCAACAAGCACAGAACACCACC...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCGTTGGTTTCCTCCTGTaGCCGTTTCTCTTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: FRDFQVCKSEACPPGGTCVGFLL*PFLFLP
Trigger: CGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAAC...GCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGCGCTCTTTCACTCGGTaGGTTTCCTCCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKRSFTR*VSSCCR
Trigger: ACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCG...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTACCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: QDAARGKPSKDHWQVRTLPSAER*ELSAEG
Trigger: TCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGG...TAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCGCTGCAGCCCCGGCTTaGGCTCCTGCCATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: APDETQMIKVLTPSTCLSAAAPA*APAIAA
Trigger: TGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGC...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCAGAGAGTCTGGGGCTAGGCTGCTGGTCATGTGGAGGTTCTTGGGATTCCCAGGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGG +
Preference number: 5 (lower is better)
Translates to: PESLGLGCWSCGGSWDSQDSSPG*VEGSRR
Trigger: CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTC...CTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGACTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGG +
Preference number: 5 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKDSSPG*VEGSRR
Trigger: CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTC...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGGGGTCTGTGTCAGGCTaGCCCCGTGAGAGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLGSVSG*PRERFK
Trigger: CTTAAACCTCTCACGGGGCAAGCCTGACACAGACCC...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGTGCAAATCAGAGGCTaGCCCGCCCGGAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRVQIRG*PARRYL
Trigger: CAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCAC...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TCCAAAGTCAGCAAGGCCAGCAGGCCGAACAAGGGATGTCTGCAGAGGACTGCTGTTGAGTTTTCGCTGTaGCCTCTTGGCCTCCCGCAT +
Preference number: 5 (lower is better)
Translates to: SKVSKASRPNKGCLQRTAVEFSL*PLGLPH
Trigger: ATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAAC...AGCAGTCCTCTGCAGACATCCCTTGTTCGGCCTGCTGGCCTTGCTGACTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACAGTGCCAGACTTGTTaGCTGCCCGTAGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRQCQTC*LPVGQL
Trigger: CAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GTGCCTTTACAGATGAGCCGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGCAGTGCCAGACTTGTTaGCTGCCCGTAGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VPLQMSRYTVTCFVCPKRQCQTC*LPVGQL
Trigger: CAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTG...CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGCCATGGTGTTCTGAATaGGGGTCCCGGTTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRPWCSE*GSRLAK
Trigger: TTTTGCTAACCGGGACCCCAATTCAGAACACCATGG...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTTCAACAAACACTGCTaGGCTGCCAGACTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSFNKHC*AARLPP
Trigger: AGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTAAGGACCCTATGCCCTaGAGACTTGAGCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSKDPMP*RLEPSQ
Trigger: CTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTT...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR CAA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGCGCTCTTTCACTCGGTaGGTTTCCTCCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: TAPAETLQGTCQSRRVESRSFTR*VSSCCR
Trigger: ACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCG...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTGGGTCTGTGTCAGGCTaGCCCCGTGAGAGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCGSVSG*PRERFK
Trigger: CTTAAACCTCTCACGGGGCAAGCCTGACACAGACCC...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRAPAET*QGTCQS
Trigger: GCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGC...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGTGGAAGGTGCTACGGTaGCTGGTAGGATCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKWKVLR*LVGSEG
Trigger: ACCTTCAGATCCTACCAGCAACCGTAGCACCTTCCA...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCGTGCAAATCAGAGGCTaGCCCGCCCGGAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVVQIRG*PARRYL
Trigger: CAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCAC...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATCAGGCTCTTCTCTGCTGAGATaGAGTTCTTCTTCATCATCG +
Preference number: 5 (lower is better)
Translates to: ANQRLARPEVPAPPGTSGSSLLR*SSSSSS
Trigger: CGATGATGAAGAAGAACTCAATCTCAGCAGAGAAGA...GCCTGATGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCATCCAGTACCATGTATaGCCACTTGACCCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: DFQVCKSEACPPGGTCSTIQYHV*PLDPLE
Trigger: TTCCAGCGGGTCAAGTGGCAATACATGGTACTGGAT...GGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCCGCCTCTCCGAGATCTaGGATGAGCCATCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSRLSEI*DEPSSL
Trigger: GAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCG...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
CDS-3UTR CAA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTTTTTCCCGCTTCCGCTaGCGCTCTTTCACTCGGTTG +
Preference number: 5 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCFSRFR*RSFTRL
Trigger: CAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAA...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTTGCCGTTTCTCTTCCCCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: FRLRSFTRLVSSCCRFSSPSAER*ELSAEG
Trigger: TCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGG...GGAAGAGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTGTGCTTCCTGAACCTTaGGGGCGGCCTCGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLVLPEP*GRPRLR
Trigger: CCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCAC...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAGAGGGGTTGGTGCCTTaGCCCTGTTTCCGGACCAGA +
Preference number: 5 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQEGLVP*PCFRTR
Trigger: TCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTC...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCCTAGCCCTGGTTTGGTaGAAGGAAGTCGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: APDETQMIKVLTPSTCLSLALVW*KEVGGP
Trigger: GGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAG...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCGGGTCTGTGTCAGGCTaGCCCCGTGAGAGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLGSVSG*PRERFK
Trigger: CTTAAACCTCTCACGGGGCAAGCCTGACACAGACCC...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGGCAAGCTTTCGGCTATaGGTGAGAAACAGGTTACGA +
Preference number: 5 (lower is better)
Translates to: WKALHSTCGDFARDVSEPASFRL*VRNRLR
Trigger: TCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGC...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATGCAAACACTGCTGATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTTTCGCTGTTGCCTCTaGGCCTCCCGCATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: MQTLLIEVAPGLSTGFWEFRCCL*ASRISS
Trigger: TGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAA...CTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAATCAGCAGTGTTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401393.7
CDS-3UTR CAA 90 bp GTGCCTTTACAGATGAGCCGGTACACAGTAACCTGCTTTGTCTGCCCTAAGCGGTTTCGCTGTTGCCTCTaGGCCTCCCGCATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VPLQMSRYTVTCFVCPKRFRCCL*ASRISS
Trigger: TGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAA...CCGCTTAGGGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGTTGAGTTTTCGCTGTaGCCTCTTGGCCTCCCGCAT +
Preference number: 5 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKVEFSL*PLGLPH
Trigger: ATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAAC...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGACATGGGTAATTAAGAAGTaGAGTTTTCGCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: RCANQRLARPEVPAPPGTWVIKK*SFRCCL
Trigger: GAGGCAACAGCGAAAACTCAACTTCTTAATTACCCA...TGTCCCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCCAGTGCCAGACTTGTTaGCTGCCCGTAGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTQCQTC*LPVGQL
Trigger: CAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTG...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTCCCTGTTCATATAGATaGGCCAACCAATTCATGCCT +
Preference number: 5 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPPCSYR*ANQFMP
Trigger: AGGCATGAATTGGTTGGCCAATCTATATGAACAGGG...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGTGTTCTGTGCTTGTaGGGTAGAGCCCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSGVLCL*GRAHRR
Trigger: TCTTCTATGGGCTCTACCCAACAAGCACAGAACACC...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGGTGAAAGAGAGACCGTaGGATATAGTCTGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: FQVCKSEACPPGGTCSTRVKERP*DIVWCK
Trigger: TTTGCACCAGACTATATCCAACGGTCTCTCTTTCAC...CCTGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCGTGAAAGAGAGACCGTaGGATATAGTCTGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RDFQVCKSEACPPGGTCSVKERP*DIVWCK
Trigger: TTTGCACCAGACTATATCCAACGGTCTCTCTTTCAC...GGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGTGAAAGAGAGACCGTaGGATATAGTCTGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: CCTGQAIQRPLAGQDSSPVKERP*DIVWCK
Trigger: TTTGCACCAGACTATATCCAACGGTCTCTCTTTCAC...AGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGTGATGAGGCTCTCCTaGCCTGGAATCCTGATGAAA +
Preference number: 5 (lower is better)
Translates to: IFRCANQRLARPEVPAPPVMRLS*PGILMK
Trigger: TTTCATCAGGATTCCAGGCAAGGAGAGCCTCATCAC...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR CAA 90 bp CGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCAAGGACCCTATGCCCTaGAGACTTGAGCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: RVSRTSRAYSFPLSVMRLKDPMP*RLEPSQ
Trigger: CTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTT...GAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557849.1
ENST00000559995.2
CDS-3UTR CAA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGTTGGTTTCCTCCTGTaGCCGTTTCTCTTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGVGFLL*PFLFLP
Trigger: CGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAAC...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GGAGTAGATAAGGACCCTATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCCGCTCTTTCACTCGGTaGGTTTCCTCCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: GVDKDPMPLRLEPSQQDIRSFTR*VSSCCR
Trigger: ACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCG...GATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTTATCTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CAA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGCCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGPSAER*ELSAEG
Trigger: TCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGG...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACCCGTCAGCAGAGAGGTaGGAGTTATCAGCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: ISVSREVGVISRGNKWDHPSAER*ELSAEG
Trigger: TCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGG...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp AGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGAGGAAGGAGAAGAGGCGCTaGAAGGTCCAAAGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: RPLAGQDSSPGLVEGSRRKEKRR*KVQSQQ
Trigger: TTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTT...CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCCTAGCCCTGGTTTGGTaGAAGGAAGTCGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTLALVW*KEVGGP
Trigger: GGGCCCTCCGACTTCCTTCAACCAAACCAGGGCTAG...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GACCACGTCCTGCAGCTGGCATTTCCTGAATGGAAATTCCATTCACGGTATCTGGCACCTGCGGAGACTTaGCAAGGGACGTGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: DHVLQLAFPEWKFHSRYLAPAET*QGTCQS
Trigger: GCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGC...CAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGATCCTTCTCTGCTCTCTaGCGGTGCTCCTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGSFSAL*RCSFST
Trigger: AGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGA...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGCCCTGTTCATATAGATaGGCCAACCAATTCATGCCT +
Preference number: 5 (lower is better)
Translates to: WKALHSTCGDFARDVSEPPCSYR*ANQFMP
Trigger: AGGCATGAATTGGTTGGCCAATCTATATGAACAGGG...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCCATGGTGTTCTGAATaGGGGTCCCGGTTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SSLLMEISLKGLGMAESTPWCSE*GSRLAK
Trigger: TTTTGCTAACCGGGACCCCAATTCAGAACACCATGG...CGTGGACTCAGCCATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCACCAAGAAGGAAATCCTaGTTCCTCAGGTATCTCTGG +
Preference number: 5 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSPRRKS*FLRYLW
Trigger: CCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGG...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATGCCCTTGAGACTTGAGCCGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCTTCAACAAACACTGCTaGGCTGCCAGACTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: MPLRLEPSQQDIKGIQLSFNKHC*AARLPP
Trigger: AGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAA...GGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CAA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCTTCAACAAACACTGCTaGGCTGCCAGACTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLFNKHC*AARLPP
Trigger: AGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAA...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGGTGATGAGGCTCTCCTaGCCTGGAATCCTGATGAAA +
Preference number: 5 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRVMRLS*PGILMK
Trigger: TTTCATCAGGATTCCAGGCAAGGAGAGCCTCATCAC...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCAAGGACCCTATGCCCTaGAGACTTGAGCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: APDETQMIKVLTPSTCLSKDPMP*RLEPSQ
Trigger: CTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTT...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS-3UTR CAA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGGTCATGTGGAGGTTCTaGGGATTCCCAGGAACATTA +
Preference number: 5 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLVMWRF*GFPGTL
Trigger: TAATGTTCCTGGGAATCCCAAGAACCTCCACATGAC...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGATGGAAGGTGCTACGGTaGCTGGTAGGATCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRWKVLR*LVGSEG
Trigger: ACCTTCAGATCCTACCAGCAACCGTAGCACCTTCCA...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATGGCTGAGTCCACGGCAAGCTTTCGGCTATaGGTGAGAAACAGGTTACGA +
Preference number: 5 (lower is better)
Translates to: SSLLMEISLKGLGMAESTASFRL*VRNRLR
Trigger: TCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGC...CGTGGACTCAGCCATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCTCCTTCTCTGCTCTCTaGCGGTGCTCCTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVSFSAL*RCSFST
Trigger: AGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGA...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTAACCCAGTGCCAGACTaGTTTGCTGCCCGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGNPVPD*FAARRA
Trigger: TGCCCTACGGGCAGCAAACAAGTCTGGCACTGGGTT...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp ACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGACCTGGGGAGCTGCCTGACCATGTATTGCCACTaGACCCGCTGGAAATACTTT +
Preference number: 5 (lower is better)
Translates to: TALSNDDTLGFRDLGSCLTMYCH*TRWKYF
Trigger: AAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGT...CAGGCAGCTCCCCAGGTCTCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTAATGAAGGAGTCATCTCCGCCATGGTGTTCTGAATaGGGGTCCCGGTTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SLKGLGMAESTLMKESSPPWCSE*GSRLAK
Trigger: TTTTGCTAACCGGGACCCCAATTCAGAACACCATGG...CGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGCCAAGCCCTTTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCCCATGGTGTTCTGAATaGGGGTCCCGGTTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLPWCSE*GSRLAK
Trigger: TTTTGCTAACCGGGACCCCAATTCAGAACACCATGG...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGTCATCAATAGCAGATTaGTTTTCGGCATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: WKALHSTCGDFARDVSEPSSIAD*FSAWLS
Trigger: TGAGAGCCATGCCGAAAACAAATCTGCTATTGATGA...CGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGGTGTTCTGTGCTTGTaGGGTAGAGCCCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: KPSKDHWQVRTLALVWLKGVLCL*GRAHRR
Trigger: TCTTCTATGGGCTCTACCCAACAAGCACAGAACACC...CTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAGGTGGTGTTCTGTGCTaGTTGGGTAGAGCCCATAGA +
Preference number: 5 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQGGVLC*LGRAHR
Trigger: TCTATGGGCTCTACCCAACAAGCACAGAACACCACC...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAATTCAACAAACACTGCTaGGCTGCCAGACTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQFNKHC*AARLPP
Trigger: AGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAA...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GACTCCCTCCTTCCTTCAGAACTCGCCTTTCATATTCTGCACTTCGGTCATTGCAAGGACCCTATGCCCTaGAGACTTGAGCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: DSLLPSELAFHILHFGHCKDPMP*RLEPSQ
Trigger: CTGACTCGGCTCAAGTCTCAAGGGCATAGGGTCCTT...GCAATGACCGAAGTGCAGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CAA 90 bp TACAGCTTTCCACTGTCAGTGATGAGGCTCTCCTTGCCTGGAATCCTGATGAAACGCCTCTCCGAGATCTaGGATGAGCCATCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: YSFPLSVMRLSLPGILMKRLSEI*DEPSSL
Trigger: GAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCG...TTTCATCAGGATTCCAGGCAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CAA 90 bp GCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTCTTCTCCTTGGCTCTTaGCAGAATGCGTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: ALHSTCGDFARDVSEPKSLLLGS*QNAFFN
Trigger: ATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG...ACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGCTTCTCCTTGGCTCTTaGCAGAATGCGTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: TAPAETLQGTCQSRRVESLLLGS*QNAFFN
Trigger: ATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGAGACTAACCACCTCTTaGGGTTTCAAGGTATCTGGT +
Preference number: 5 (lower is better)
Translates to: TAPAETLQGTCQSRRVESRLTTS*GFKVSG
Trigger: ACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCT...CGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CGCAGCCTCAGTTTCTTCTCCAACTCTTCGTCGTCTAGAAGAAGACTAACCACCGTTGGTTTCCTCCTGTaGCCGTTTCTCTTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: RSLSFFSNSSSSRRRLTTVGFLL*PFLFLP
Trigger: CGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAAC...GGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCAAGGAGAAGAGGCGCTaGAAGGTCCAAAGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSKEKRR*KVQSQQ
Trigger: TTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTT...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCAAGGAGAAGAGGCGCTaGAAGGTCCAAAGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLKEKRR*KVQSQQ
Trigger: TTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTT...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATTGAGGTGGCTCCTGGTCTCTCTACTGGCTTCTGGGAGTCCCCTGGGTGGAAGGGAACATTATTTCCCTaGCTCAAAGGGGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: IEVAPGLSTGFWESPGWKGTLFP*LKGELK
Trigger: TTTGAGTTCCCCTTTGAGCAAGGGAAATAATGTTCC...CTTCCACCCAGGGGACTCCCAGAAGCCAGTAGAGAGACCAGGAGCCACCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATGACTCTAGCCCTGGTTaGGTTGAAGGAAGTCGGAGG +
Preference number: 5 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYDSSPG*VEGSRR
Trigger: CCTCCGACTTCCTTCAACCAAACCAGGGCTAGAGTC...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS CCA 90 bp CTCTCTCCCTTCTATGACTTGACATGGCAGTATCCCAGCAGATCGTaGGTCAGAGCAAACATCTCCCATGTAGGATGTGTGTCGCAGACT +
Preference number: 5 (lower is better)
Translates to: LSPFYDLTWQYPSRS*VRANISHVGCVSQT
Trigger: AGTCTGCGACACACATCCTACATGGGAGATGTTTGCTCTGACCCACGATCTGCTGGGATACTGCCATGTCAAGTCATAGAAGGGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CAA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTTTAAATTTCTTTTTCTaGGGTCCAAGTAGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSLNFFF*GPSRCR
Trigger: ACGGCACCTACTTGGACCCAAGAAAAAGAAATTTAA...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GGAATGGAGCCAGTGTGCAGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTAACTCCTGGTGCCAATaGTTAAGTGTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: GMEPVCSSLLMEISLKGLNSWCQ*LSVDAG
Trigger: ACCTGCGTCTACACTTAACAATTGGCACCAGGAGTT...AAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCAACTCCTGGTGCCAATaGTTAAGTGTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSNSWCQ*LSVDAG
Trigger: ACCTGCGTCTACACTTAACAATTGGCACCAGGAGTT...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAAACTCCTGGTGCCAATaGTTAAGTGTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGNSWCQ*LSVDAG
Trigger: ACCTGCGTCTACACTTAACAATTGGCACCAGGAGTT...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAATCCAGTACCATGTATaGCCACTTGACCCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQIQYHV*PLDPLE
Trigger: TTCCAGCGGGTCAAGTGGCAATACATGGTACTGGAT...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGACCAAGAAGGAAATCCTaGTTCCTCAGGTATCTCTGG +
Preference number: 5 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRPRRKS*FLRYLW
Trigger: CCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGG...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TTGGTTTCCTCCTGTTGCCGTTTCTCTTCCTGCCGCAGCCTCAGTTTCTTCTCCCCAAGAAGGAAATCCTaGTTCCTCAGGTATCTCTGG +
Preference number: 5 (lower is better)
Translates to: LVSSCCRFSSCRSLSFFSPRRKS*FLRYLW
Trigger: CCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGG...GGAGAAGAAACTGAGGCTGCGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp AGCTCACTGCTGATGGAGATCTCACTGAAAGGGCTTGGCATGGCTGAGTCCACGCTTCTCCTTGGCTCTTaGCAGAATGCGTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: SSLLMEISLKGLGMAESTLLLGS*QNAFFN
Trigger: ATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG...CGTGGACTCAGCCATGCCAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp CTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGACGTGTCTTCTCCTTGGCTCTTaGCAGAATGCGTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: LYHGRLFTAPAETLQGTCLLLGS*QNAFFN
Trigger: ATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG...ACACGTCCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTACCTGCTCCACCAGGAACATTATTTCCCTaGCTCAAAGGGGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: IFRCANQRLARPEVPAPPGTLFP*LKGELK
Trigger: TTTGAGTTCCCCTTTGAGCAAGGGAAATAATGTTCC...TGGTGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGTCATGTGGAGGTTCTaGGGATTCCCAGGAACATTA +
Preference number: 5 (lower is better)
Translates to: ETQFRDFQVCKSEACPPGVMWRF*GFPGTL
Trigger: TAATGTTCCTGGGAATCCCAAGAACCTCCACATGAC...TCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCACCATCTCTCGCAGTCACTGCTCTCTCCAATGATGACACTCTGGGGTTCAGAGTCATGTGGAGGTTCTaGGGATTCCCAGGAACATTA +
Preference number: 5 (lower is better)
Translates to: PPSLAVTALSNDDTLGFRVMWRF*GFPGTL
Trigger: TAATGTTCCTGGGAATCCCAAGAACCTCCACATGAC...TCTGAACCCCAGAGTGTCATCATTGGAGAGAGCAGTGACTGCGAGAGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGAGGCTATACAGTTCACTaGAGATGCAGTGGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRGYTVH*RCSGAD
Trigger: ATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCC...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS TCA 90 bp TGTAAACCATGTATTCCTGGAATCCTGATGAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGACCTCCAGCTGGCTCTGGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: CKPCIPGILMKDQPF*GLMLHRPPAGSGKN
Trigger: GTTCTTCCCAGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTTCATCAGGATTCCAGGAATACATGGTTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000616814.4
CDS CCA 90 bp TGGGTCCAAGTAGGTGCCGTTGTTGCTCATAGAAAGGGTCATATGTaGAGAGCAGGCCTGCACTGTAGTACTGATATTGCTGCAACTCCT +
Preference number: 5 (lower is better)
Translates to: WVQVGAVVAHRKGHM*RAGLHCSTDIAATP
Trigger: AGGAGTTGCAGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCTATGAGCAACAACGGCACCTACTTGGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCGCAAGCTTTCGGCTATaGGTGAGAAACAGGTTACGA +
Preference number: 5 (lower is better)
Translates to: APDETQMIKVLTPSTCLSASFRL*VRNRLR
Trigger: TCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGC...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAGGACTCTATTCATGCCTTTCAGTaGATAACCTTTCAATTTGCC +
Preference number: 5 (lower is better)
Translates to: ARCCTGQAIQRPLAGQDSIHAFQ*ITFQFA
Trigger: GGCAAATTGAAAGGTTATCAACTGAAAGGCATGAAT...AGAGTCCTGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTGCCCGCCCGGAGGTATCATCAATAGCAGATTaGTTTTCGGCATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LNSAIFRCANQRLARPEVSSIAD*FSAWLS
Trigger: TGAGAGCCATGCCGAAAACAAATCTGCTATTGATGA...TACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CGAGTCAGCAGGACATCAAGGGCATACAGCTTTCCACTGTCAGTGATGAGGCTCGTGAAAGAGAGACCGTaGGATATAGTCTGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RVSRTSRAYSFPLSVMRLVKERP*DIVWCK
Trigger: TTTGCACCAGACTATATCCAACGGTCTCTCTTTCAC...GAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CAA 90 bp TCTCTGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCAAGAAGGAAATCCTaGTTCCTCAGGTATCTCTGG +
Preference number: 5 (lower is better)
Translates to: SLHTFPASACALSLGWFPPRRKS*FLRYLW
Trigger: CCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGG...AGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGAGACTAACCACCTCTTaGGGTTTCAAGGTATCTGGT +
Preference number: 5 (lower is better)
Translates to: CILFPLPLALFHSVGFLLRLTTS*GFKVSG
Trigger: ACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCT...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp CTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGATGAGCGCTCTTTCACTCGGTaGGTTTCCTCCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: LLLGSLQNAFFNGAFTDERSFTR*VSSCCR
Trigger: ACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCG...CTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp CTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGATGAGTTTTCCCGCTTCCGCTaGCGCTCTTTCACTCGGTTG +
Preference number: 5 (lower is better)
Translates to: LLLGSLQNAFFNGAFTDEFSRFR*RSFTRL
Trigger: CAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAA...CTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCATCTGCTTATTTGCCTTaGGTAGTTCCTTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSSAYLP*VVPFSQ
Trigger: TTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGA...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TATACAGTTCACTTGAGATGCAGTGGGGCTGATCCATGCCCTGTGGCCTTCCTCTGGGTAATTAAGAAGTaGAGTTTTCGCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: YTVHLRCSGADPCPVAFLWVIKK*SFRCCL
Trigger: GAGGCAACAGCGAAAACTCAACTTCTTAATTACCCA...GAGGAAGGCCACAGGGCATGGATCAGCCCCACTGCATCTCAAGTGAACTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAGACCACTGGCAGGTCAATTCATGCCTTTCAGTaGATAACCTTTCAATTTGCC +
Preference number: 5 (lower is better)
Translates to: SGCKMLHGASHPKTTGRSIHAFQ*ITFQFA
Trigger: GGCAAATTGAAAGGTTATCAACTGAAAGGCATGAAT...TGACCTGCCAGTGGTCTTTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGAACCATGTATTGCCACTaGACCCGCTGGAAATACTTT +
Preference number: 5 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRTMYCH*TRWKYF
Trigger: AAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGT...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCACCATGTATTGCCACTaGACCCGCTGGAAATACTTT +
Preference number: 5 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVTMYCH*TRWKYF
Trigger: AAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGT...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTATCCAGTACCATGTATaGCCACTTGACCCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGIQYHV*PLDPLE
Trigger: TTCCAGCGGGTCAAGTGGCAATACATGGTACTGGAT...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCGGCAGCTGCAAAGGTTaGGAAAGGAGAGTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFGSCKG*ERRVEN
Trigger: ATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGCC...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS TCA 90 bp ACAAAGCAGGTGGATGAAAATTGGGTCTCTCTCCCTTCTATGACTTaGCATGGCAGTATCCCAGCAGATCGTGGGTCAGAGCAAACATCT +
Preference number: 5 (lower is better)
Translates to: TKQVDENWVSLPSMT*HGSIPADRGSEQTS
Trigger: AGATGTTTGCTCTGACCCACGATCTGCTGGGATACTGCCATGTCAAGTCATAGAAGGGAGAGAGACCCAATTTTCATCCACCTGCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS TCA 90 bp GGAATACAAAGCAGGTGGATGAAAATTGGGTCTCTCTCCCTTCTATaGCTTGACATGGCAGTATCCCAGCAGATCGTGGGTCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: GIQSRWMKIGSLSLL*LDMAVSQQIVGQSK
Trigger: TTTGCTCTGACCCACGATCTGCTGGGATACTGCCATGTCAAGTCATAGAAGGGAGAGAGACCCAATTTTCATCCACCTGCTTTGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CAA 90 bp CAAAGACCACTGGCAGGTCAGGACTCTAGCCCTGGTTTGGTTGAAGGAAGTCGGTCTGCTTATTTGCCTTaGGTAGTTCCTTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: QRPLAGQDSSPGLVEGSRSAYLP*VVPFSQ
Trigger: TTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGA...CCGACTTCCTTCAACCAAACCAGGGCTAGAGTCCTGACCTGCCAGTGGTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTCCACCTATATCGATTaGTCTCTGGGTAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTSTYID*SLGRTV
Trigger: GACAGTTCTACCCAGAGACAAATCGATATAGGTGGA...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAAATTCCATTCACGGTATCTGAGACGGAGCCTGTTATGGATGCGGGAGAGTTGTCCACCTATATCGATTaGTCTCTGGGTAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: EIPFTVSETEPVMDAGELSTYID*SLGRTV
Trigger: GACAGTTCTACCCAGAGACAAATCGATATAGGTGGA...CAACTCTCCCGCATCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCAACCCAGTGCCAGACTaGTTTGCTGCCCGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGNPVPD*FAARRA
Trigger: TGCCCTACGGGCAGCAAACAAGTCTGGCACTGGGTT...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCCCCTGTTCATATAGATaGGCCAACCAATTCATGCCT +
Preference number: 5 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTPCSYR*ANQFMP
Trigger: AGGCATGAATTGGTTGGCCAATCTATATGAACAGGG...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTAACTCCTGGTGCCAATaGTTAAGTGTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLNSWCQ*LSVDAG
Trigger: ACCTGCGTCTACACTTAACAATTGGCACCAGGAGTT...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AGAAATCTCTACCATGGAAGGCTCTTCACAGCACCTGCGGAGACTTTGCAAGGGTCATCAATAGCAGATTaGTTTTCGGCATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: RNLYHGRLFTAPAETLQGSSIAD*FSAWLS
Trigger: TGAGAGCCATGCCGAAAACAAATCTGCTATTGATGA...CCCTTGCAAAGTCTCCGCAGGTGCTGTGAAGAGCCTTCCATGGTAGAGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AAATTAACCCCAAGAAGGAAATCCTTGTTCCTCAGGTATCTCTGGTGGCTCTCCGGTGTTCTGTGCTTGTaGGGTAGAGCCCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: KLTPRRKSLFLRYLWWLSGVLCL*GRAHRR
Trigger: TCTTCTATGGGCTCTACCCAACAAGCACAGAACACC...GGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CAA 90 bp TCTGTGTCAGGCTTGCCCCGTGAGAGGTTTAAGACTTGGCTATACAGTTCACTTGGCAGCTGCAAAGGTTaGGAAAGGAGAGTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: SVSGLPRERFKTWLYSSLGSCKG*ERRVEN
Trigger: ATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGCC...AAGTGAACTGTATAGCCAAGTCTTAAACCTCTCACGGGGCAAGCCTGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCCGCCTCTCCGAGATCTaGGATGAGCCATCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGRLSEI*DEPSSL
Trigger: GAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCG...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACTTCAAGGTATCTGGTTaGAAGTTCCCACCTGAAATC +
Preference number: 5 (lower is better)
Translates to: ISVSREVGVISRGNKWDHFKVSG*KFPPEI
Trigger: GATTTCAGGTGGGAACTTCAAACCAGATACCTTGAA...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAATTCAAGGTATCTGGTTaGAAGTTCCCACCTGAAATC +
Preference number: 5 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQFKVSG*KFPPEI
Trigger: GATTTCAGGTGGGAACTTCAAACCAGATACCTTGAA...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCGTTGGTTTCCTCCTGTaGCCGTTTCTCTTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLVGFLL*PFLFLP
Trigger: CGGCAGGAAGAGAAACGGCAACAGGAGGAAACCAAC...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS CCA 90 bp CCCATATCTCGTTTGCGACTCATGAAATGGGCATACAACTCTGTCTaGGTAATTAAGAAGTTGAGTTTTCGCTGTTGCCTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PISRLRLMKWAYNSV*VIKKLSFRCCLLAS
Trigger: GGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTATGCCCATTTCATGAGTCGCAAACGAGATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCTCCCCTTATCACATTTaGATTCTGACTGTAGAACTC +
Preference number: 5 (lower is better)
Translates to: APDETQMIKVLTPSTCLSSPYHI*ILTVEL
Trigger: GAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGA...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAAATTCCATTCACGGTATCTGAGACGGAGCCTGTTATGGATGCGGGAGAGTTGTCTTCTCTGCTGAGATaGAGTTCTTCTTCATCATCG +
Preference number: 5 (lower is better)
Translates to: EIPFTVSETEPVMDAGELSSLLR*SSSSSS
Trigger: CGATGATGAAGAAGAACTCAATCTCAGCAGAGAAGA...CAACTCTCCCGCATCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp ATCTCCGTCAGCAGAGAGGTTGGAGTTATCAGCCGAGGGAACAAATGGGATCACTTAAATTTCTTTTTCTaGGGTCCAAGTAGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: ISVSREVGVISRGNKWDHLNFFF*GPSRCR
Trigger: ACGGCACCTACTTGGACCCAAGAAAAAGAAATTTAA...GTGATCCCATTTGTTCCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAGTTGAGTTTTCGCTGTaGCCTCTTGGCCTCCCGCAT +
Preference number: 5 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAVEFSL*PLGLPH
Trigger: ATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAAC...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TGCATACTTTTCCCGCTTCCGCTTGCGCTCTTTCACTCGGTTGGTTTCCTCCTGTGGCTCTCAATGTCCTaGGAAAACCATTCATTAAAT +
Preference number: 5 (lower is better)
Translates to: CILFPLPLALFHSVGFLLWLSMS*ENHSLN
Trigger: ATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCA...CAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp TCCTTCCTTCAGAACTCGCCTTTCATATTCTGCACTTCGGTCATTGCAGTAAGAGTGATGAGGCTCTCCTaGCCTGGAATCCTGATGAAA +
Preference number: 5 (lower is better)
Translates to: SFLQNSPFIFCTSVIAVRVMRLS*PGILMK
Trigger: TTTCATCAGGATTCCAGGCAAGGAGAGCCTCATCAC...TCTTACTGCAATGACCGAAGTGCAGAATATGAAAGGCGAGTTCTGAAGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS-3UTR CAA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCGCCTCTCCGAGATCTaGGATGAGCCATCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: KINLSKLNSAIFRCANQRRLSEI*DEPSSL
Trigger: GAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCG...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCGCTGAATCTCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTAGACTAACCACCTCTTaGGGTTTCAAGGTATCTGGT +
Preference number: 5 (lower is better)
Translates to: PLNLTLLLGSLQNAFFNGRLTTS*GFKVSG
Trigger: ACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCT...ACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGAGATTCAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTTTTTCCCGCTTCCGCTaGCGCTCTTTCACTCGGTTG +
Preference number: 5 (lower is better)
Translates to: INLSKLNSAIFRCANQRLFSRFR*RSFTRL
Trigger: CAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAA...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp CCCAGTCCTCCAGCTCGTGTGCTTAACAGGAACACAAAGATGTCATTCCTGTTCGGAACATTATTTCCCTaGCTCAAAGGGGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: PSPPARVLNRNTKMSFLFGTLFP*LKGELK
Trigger: TTTGAGTTCCCCTTTGAGCAAGGGAAATAATGTTCC...GAACAGGAATGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp AAGAAGACTAACCACCTCTTTGGGTTTCAAGGTATCTGGTTTGAAGTTCCCACCGGCTATACAGTTCACTaGAGATGCAGTGGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: KKTNHLFGFQGIWFEVPTGYTVH*RCSGAD
Trigger: ATCAGCCCCACTGCATCTCAAGTGAACTGTATAGCC...GGTGGGAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558357.6
CDS-3UTR CAA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTATCTCCCTTCTATGACTaGACATGGCAGTATCCCAGC +
Preference number: 5 (lower is better)
Translates to: SHQASCRYASCKPCIPPVSPFYD*TWQYPS
Trigger: GCTGGGATACTGCCATGTCAAGTCATAGAAGGGAGA...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS GCA 90 bp GTGCCGTTGTTGCTCATAGAAAGGGTCATATGTGGAGAGCAGGCCTaGACTGTAGTACTGATATTGCTGCAACTCCTTGTCTTTACTATA +
Preference number: 5 (lower is better)
Translates to: VPLLLIERVICGEQA*TVVLILLQLLVFTI
Trigger: TATAGTAAAGACAAGGAGTTGCAGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCTATGAGCAACAACGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS-3UTR CAA 90 bp ACTTTGCAAGGGACGTGTCAGAGCCGAAGAGTGGAATCGGGATGGAAACAGTATTCCCCTTATCACATTTaGATTCTGACTGTAGAACTC +
Preference number: 5 (lower is better)
Translates to: TLQGTCQSRRVESGWKQYSPYHI*ILTVEL
Trigger: GAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGA...ATACTGTTTCCATCCCGATTCCACTCTTCGGCTCTGACACGTCCCTTGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GAGTGGAATCGGGATGGAAACAGTATGCCTGAGCATCTAAAGGGGGTCTGTGTCTCTGCTTATTTGCCTTaGGTAGTTCCTTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: EWNRDGNSMPEHLKGVCVSAYLP*VVPFSQ
Trigger: TTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGA...GACACAGACCCCCTTTAGATGCTCAGGCATACTGTTTCCATCCCGATTCCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GTGAACCATGCAGGATGGGAGGAATTGCTGGGAACACAACTGCCTGTGGATAGAAAGCTTTCTGCTTATTaGCCTTTGGTAGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: VNHAGWEELLGTQLPVDRKLSAY*PLVVPF
Trigger: AAAAGGAACTACCAAAGGCAAATAAGCAGAAAGCTT...TCTATCCACAGGCAGTTGTGTTCCCAGCAATTCCTCCCATCCTGCATGGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACATTTCCACTTCTGACTCAGGATGCAAGATGCTGCACGGGGCAAGCCATCCAAAAGCTTTCTGCTTATTaGCCTTTGGTAGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: TFPLLTQDARCCTGQAIQKLSAY*PLVVPF
Trigger: AAAAGGAACTACCAAAGGCAAATAAGCAGAAAGCTT...TTGGATGGCTTGCCCCGTGCAGCATCTTGCATCCTGAGTCAGAAGTGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp GCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCTGCCTGTCCTGGCTCTCAATGTCCTaGGAAAACCATTCATTAAAT +
Preference number: 5 (lower is better)
Translates to: APDETQMIKVLTPSTCLSWLSMS*ENHSLN
Trigger: ATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCA...GGACAGGCAGGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAGGTGGTGTTCTGTGCTaGTTGGGTAGAGCCCATAGA +
Preference number: 5 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAGGVLC*LGRAHR
Trigger: TCTATGGGCTCTACCCAACAAGCACAGAACACCACC...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACCCCAGATGCTCCTGATGAGACACAGATGATAAAAGTGCTCACACCATCCACCATTCATGCCTTTCAGTaGATAACCTTTCAATTTGCC +
Preference number: 5 (lower is better)
Translates to: TPDAPDETQMIKVLTPSTIHAFQ*ITFQFA
Trigger: GGCAAATTGAAAGGTTATCAACTGAAAGGCATGAAT...GGTGGATGGTGTGAGCACTTTTATCATCTGTGTCTCATCAGGAGCATCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp TCACTCTTCTCCTTGGCTCTTTGCAGAATGCGTTCTTCAATGGTGCCTTTACAGTCATCAATAGCAGATTaGTTTTCGGCATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SLFSLALCRMRSSMVPLQSSIAD*FSAWLS
Trigger: TGAGAGCCATGCCGAAAACAAATCTGCTATTGATGA...CTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAGAGCCAAGGAGAAGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000559995.2
CDS-3UTR CAA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCGGCAGCTGCAAAGGTTaGGAAAGGAGAGTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLGSCKG*ERRVEN
Trigger: ATTTTCCACTCTCCTTTCCAAACCTTTGCAGCTGCC...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS TCA 90 bp AAGCTTTCTGCTTATTTGCCTTTGGTAGTTCCTTTTTCACAATGCTaGGCCATACTTTCCTGCGACGAGCATTCAGCTGCTCAATGGATA +
Preference number: 5 (lower is better)
Translates to: KLSAYLPLVVPFSQC*AILSCDEHSAAQWI
Trigger: TATCCATTGAGCAGCTGAATGCTCGTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 90 bp GAACTGTCTTCCAGTTTCCTTAGGATTTCTTCCTGGATACCATCATaGCCCATATCTCGTTTGCGACTCATGAAATGGGCATACAACTCT +
Preference number: 5 (lower is better)
Translates to: ELSSSFLRISSWIPS*PISRLRLMKWAYNS
Trigger: AGAGTTGTATGCCCATTTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAGGAAACTGGAAGACAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS-3UTR CAA 90 bp AGCCATCAAGCCTCATGTAGGTATGCTTCCTGTAAACCATGTATTCCTCCAGTATTCAAGGTATCTGGTTaGAAGTTCCCACCTGAAATC +
Preference number: 5 (lower is better)
Translates to: SHQASCRYASCKPCIPPVFKVSG*KFPPEI
Trigger: GATTTCAGGTGGGAACTTCAAACCAGATACCTTGAA...TACTGGAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS CCA 90 bp TGTGTGATGTTAACTACCACTCCTCCACCTATATCGATTTGTCTCTaGGTAGAACTGTCTTCCAGTTTCCTTAGGATTTCTTCCTGGATA +
Preference number: 5 (lower is better)
Translates to: CVMLTTTPPPISICL*VELSSSFLRISSWI
Trigger: TATCCAGGAAGAAATCCTAAGGAAACTGGAAGACAGTTCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAACATCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS-3UTR CAA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTCCACCTATATCGATTaGTCTCTGGGTAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGSTYID*SLGRTV
Trigger: GACAGTTCTACCCAGAGACAAATCGATATAGGTGGA...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCAAGACTAACCACCTCTTaGGGTTTCAAGGTATCTGGT +
Preference number: 5 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTARLTTS*GFKVSG
Trigger: ACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCT...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp AAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTCTTCTCTGCTGAGATaGAGTTCTTCTTCATCATCG +
Preference number: 5 (lower is better)
Translates to: KSIYRNSIPRFSGVQIRGSSLLR*SSSSSS
Trigger: CGATGATGAAGAAGAACTCAATCTCAGCAGAGAAGA...GCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ACTAGCCCTATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTAAATTTCTTTTTCTaGGGTCCAAGTAGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: TSPMRNHTLKRNLYHGRLLNFFF*GPSRCR
Trigger: ACGGCACCTACTTGGACCCAAGAAAAAGAAATTTAA...GAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCATAGGGCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCATGGGTAATTAAGAAGTaGAGTTTTCGCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAWVIKK*SFRCCL
Trigger: GAGGCAACAGCGAAAACTCAACTTCTTAATTACCCA...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS GCA 90 bp ACTGTAGAACTCCATTCAGAGAATATGTGTTTAACATTCCAGAACTaGCTGCTCCAGAAGTTTCACCAAGCAATGAATTTGGAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: TVELHSENMCLTFQN*LLQKFHQAMNLEVL
Trigger: AAGAACCTCCAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAAACACATATTCTCTGAATGGAGTTCTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS-3UTR CAA 90 bp GATATAGCAGCTTCTGTCGGCTGGTCAGTTGGCAATACATTAGAATCTCAATCTTGGCTCTCAATGTCCTaGGAAAACCATTCATTAAAT +
Preference number: 5 (lower is better)
Translates to: DIAASVGWSVGNTLESQSWLSMS*ENHSLN
Trigger: ATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCA...AGATTGAGATTCTAATGTATTGCCAACTGACCAGCCGACAGAAGCTGCTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS-3UTR CAA 90 bp AAAATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGTTCAAGGTATCTGGTTaGAAGTTCCCACCTGAAATC +
Preference number: 5 (lower is better)
Translates to: KINLSKLNSAIFRCANQRFKVSG*KFPPEI
Trigger: GATTTCAGGTGGGAACTTCAAACCAGATACCTTGAA...CCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATCAATCTATCGAAACTCAATTCCGCGATTTTCAGGTGTGCAAATCAGAGGCTTAAGCTTTCTGCTTATTaGCCTTTGGTAGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: INLSKLNSAIFRCANQRLKLSAY*PLVVPF
Trigger: AAAAGGAACTACCAAAGGCAAATAAGCAGAAAGCTT...AAGCCTCTGATTTGCACACCTGAAAATCGCGGAATTGAGTTTCGATAGATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS-3UTR CAA 90 bp ATGAGAAATCACACTCTTAAGAGAAATCTCTACCATGGAAGGCTCTTCACAGCATGGCTCTCAATGTCCTaGGAAAACCATTCATTAAAT +
Preference number: 5 (lower is better)
Translates to: MRNHTLKRNLYHGRLFTAWLSMS*ENHSLN
Trigger: ATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCA...TGCTGTGAAGAGCCTTCCATGGTAGAGATTTCTCTTAAGAGTGTGATTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000648947.1
CDS CCA 72 bp GCGTGGACGCTCCTAGCTCGCTCCCTCCGCGGCTCCTaGGACCCCAAGATGGCGGCGGCGCTGAGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: AWTLLARSLRGS*DPKMAAALRRL
Trigger: CAGCCGCCTCAGCGCCGCCGCCATCTTGGGGTCCCAGGAGCCGCGGAGGGAGCGAGCTAGGAGCGTCCACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648947.1
CDS TCA 72 bp GCTGGGCCGGCGGCGGCGGCGGCCACTTTCACTCACTaGGAGGAGCGGAGCAGGGACACGGGGAGCCATGGC +
Preference number: 6 (lower is better)
Translates to: AGPAAAAATFTH*EERSRDTGSHG
Trigger: GCCATGGCTCCCCGTGTCCCTGCTCCGCTCCTCTCAGTGAGTGAAAGTGGCCGCCGCCGCCGCCGGCCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648947.1
CDS TCA 72 bp TGGAGCCGCGGTTCGCTCTCTGAGGCCGTGGGACGGTaGCTGCGTTGGGCGTGGACGCTCCTAGCTCGCTCC +
Preference number: 6 (lower is better)
Translates to: WSRGSLSEAVGR*LRWAWTLLARS
Trigger: GGAGCGAGCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTCAGAGAGCGAACCGCGGCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401393.7
ENST00000648947.1
CDS CCA 72 bp CGGCGGGCACGAGGCAAGGTTTCCTTACAGTTCTTCTaGGCCTGCAAGGCAGCTCGACGCACCTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: RRARGKVSLQFF*ACKAARRTSFM
Trigger: CATGAAGGAGGTGCGTCGAGCTGCCTTGCAGGCCCAGAAGAACTGTAAGGAAACCTTGCCTCGTGCCCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS GCA 72 bp CCAAGTACTGAAGATAGAGGGGCTTTGCCAGCTCAGTaGAGCCTCCATCATCCCTGGCACCCAACTCCGAGG +
Preference number: 6 (lower is better)
Translates to: PSTEDRGALPAQ*SLHHPWHPTPR
Trigger: CCTCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTTCAGTACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS GCA 72 bp GCACGAGGCAAGGTTTCCTTACAGTTCTTCTGGGCCTaGAAGGCAGCTCGACGCACCTCCTTCATGCACTGG +
Preference number: 6 (lower is better)
Translates to: ARGKVSLQFFWA*KAARRTSFMHW
Trigger: CCAGTGCATGAAGGAGGTGCGTCGAGCTGCCTTGCAGGCCCAGAAGAACTGTAAGGAAACCTTGCCTCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS GCA 72 bp AGGCTGCTGCTCTCGTCCAGGGGAATGGAGCCAGTGTaGAGCTCACTGCTGATGGAGATCTCACTGAAAGGG +
Preference number: 6 (lower is better)
Translates to: RLLLSSRGMEPV*SSLLMEISLKG
Trigger: CCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616814.4
CDS CAA 72 bp GCAGCAGAGCCCAAAGCTCTGCCATGGTGTTCTGAATaGGGGTCCCGGTTAGCAAAAGCCGATTCCGACACT +
Preference number: 6 (lower is better)
Translates to: AAEPKALPWCSE*GSRLAKADSDT
Trigger: AGTGTCGGAATCGGCTTTTGCTAACCGGGACCCCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000559995.2
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp TGTGGGCTGTGGAATATCCTCACCAGCCCGGATAGATaGGTTAGCCAGGCTATAACTCTCCCCAAACCCAGT +
Preference number: 6 (lower is better)
Translates to: CGLWNILTSPDR*VSQAITLPKPS
Trigger: ACTGGGTTTGGGGAGAGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGTGAGGATATTCCACAGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000561172.1
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp GCGCCTGAGCCTCATCCAGTACCATGTATTGCCACTTaGCCCGCTGGAAATACTTTACATCCTGCACCACCA +
Preference number: 6 (lower is better)
Translates to: APEPHPVPCIAT*PAGNTLHPAPP
Trigger: TGGTGGTGCAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp AAATGCAGCAGAGCCCAAAGCTCTGCCATGGTGTTCTaGATTGGGGTCCCGGTTAGCAAAAGCCGATTCCGA +
Preference number: 6 (lower is better)
Translates to: KCSRAQSSAMVF*IGVPVSKSRFR
Trigger: TCGGAATCGGCTTTTGCTAACCGGGACCCCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTGCTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000559995.2
ENST00000616814.4
ENST00000648947.1
CDS CAA 90 bp ACTGGAACTACTCTTGAGCGCCTGAGCCTCATCCAGTACCATGTATaGCCACTTGACCCGCTGGAAATACTTTACATCCTGCACCACCAG +
Preference number: 6 (lower is better)
Translates to: TGTTLERLSLIQYHV*PLDPLEILYILHHQ
Trigger: CTGGTGGTGCAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAGTTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp TCTCATATTTCTTCCAGTACAGAAGCATCTCCTTGGTaGGGCGGCGGGCACGAGGCAAGGTTTCCTTACAGT +
Preference number: 6 (lower is better)
Translates to: SHISSSTEASPW*GGGHEARFPYS
Trigger: ACTGTAAGGAAACCTTGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTCTGTACTGGAAGAAATATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp TGTATTCCTGGAATCCTGATGAAAGACCAGCCATTCTaGGGTCTGATGCTCCACAGACCTCCAGCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: CIPGILMKDQPF*GLMLHRPPAGS
Trigger: AGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTTCATCAGGATTCCAGGAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558357.6
ENST00000616814.4
CDS CCA 72 bp CTGAGTGACCACGTCCTGCAGCTGGCATTTCCTGAATaGAAATTCCTGTGGGAACAAATGGGCCAAAAGGGA +
Preference number: 6 (lower is better)
Translates to: LSDHVLQLAFPE*KFLWEQMGQKG
Trigger: TCCCTTTTGGCCCATTTGTTCCCACAGGAATTTCCATTCAGGAAATGCCAGCTGCAGGACGTGGTCACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558270.1
CDS TCA 72 bp ATCTTCCAACGAACACTGGAACTACTCTTGAGCGCCTaGGCCTCATCCAGTACCATGTATTGCCACTTGACC +
Preference number: 6 (lower is better)
Translates to: IFQRTLELLLSA*ASSSTMYCHLT
Trigger: GGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAGTTCCAGTGTTCGTTGGAAGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp GTGGATGAAAATTGGGTCTCTCTCCCTTCTATGACTTaGCATGGCAGTATCCCAGCAGATCGTGGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: VDENWVSLPSMT*HGSIPADRGSE
Trigger: CTCTGACCCACGATCTGCTGGGATACTGCCATGTCAAGTCATAGAAGGGAGAGAGACCCAATTTTCATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS TCA 72 bp AGCAGGTGGATGAAAATTGGGTCTCTCTCCCTTCTATaGCTTGACATGGCAGTATCCCAGCAGATCGTGGGT +
Preference number: 6 (lower is better)
Translates to: SRWMKIGSLSLL*LDMAVSQQIVG
Trigger: ACCCACGATCTGCTGGGATACTGCCATGTCAAGTCATAGAAGGGAGAGAGACCCAATTTTCATCCACCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS CCA 72 bp ATTGGGGTCCCGGTTAGCAAAAGCCGATTCCGACACTaGAACTGTAAGAGGATCTTCCAACGAACACTGGAA +
Preference number: 6 (lower is better)
Translates to: IGVPVSKSRFRH*NCKRIFQRTLE
Trigger: TTCCAGTGTTCGTTGGAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCTTTTGCTAACCGGGACCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp ATTGGGGTCCCGGTTAGCAAAAGCCGATTCCGACACTaGAACTGTAAGAGGATCTTCCAACGAACACTGACT +
Preference number: 6 (lower is better)
Translates to: IGVPVSKSRFRH*NCKRIFQRTLT
Trigger: AGTCAGTGTTCGTTGGAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCTTTTGCTAACCGGGACCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559995.2
CDS CAA 72 bp TGTTTGCTGCCCGTAGGGCAGCTGCTCGACTTTCTTTaGCATCTTCATCAAATGACCTTGTCCGAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: CLLPVGQLLDFL*HLHQMTLSELG
Trigger: ACCAAGCTCGGACAAGGTCATTTGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CAA 72 bp ACTCTTGAGCGCCTGAGCCTCATCCAGTACCATGTATaGCCACTTGACCCGCTGGAAATACTTTACATCCTG +
Preference number: 6 (lower is better)
Translates to: TLERLSLIQYHV*PLDPLEILYIL
Trigger: CAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGCTCAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CAA 90 bp TGCCAGACTTGTTTGCTGCCCGTAGGGCAGCTGCTCGACTTTCTTTaGCATCTTCATCAAATGACCTTGTCCGAGCTTGGTGAATATGGT +
Preference number: 6 (lower is better)
Translates to: CQTCLLPVGQLLDFL*HLHQMTLSELGEYG
Trigger: ACCATATTCACCAAGCTCGGACAAGGTCATTTGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACAAGTCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS GCA 72 bp ATGCTGAGCCATACTTTCCTGCGACGAGCATTCAGCTaGTCAATGGATAAGTGCTTTTTCTTAGTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: MLSHTFLRRAFS*SMDKCFFLVPG
Trigger: CCCTGGCACTAAGAAAAAGCACTTATCCATTGAGCAGCTGAATGCTCGTCGCAGGAAAGTATGGCTCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp GTAGGTGCCGTTGTTGCTCATAGAAAGGGTCATATGTaGAGAGCAGGCCTGCACTGTAGTACTGATATTGCT +
Preference number: 6 (lower is better)
Translates to: VGAVVAHRKGHM*RAGLHCSTDIA
Trigger: AGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCTATGAGCAACAACGGCACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp TTCTATGACTTGACATGGCAGTATCCCAGCAGATCGTaGGTCAGAGCAAACATCTCCCATGTAGGATGTGTG +
Preference number: 6 (lower is better)
Translates to: FYDLTWQYPSRS*VRANISHVGCV
Trigger: CACACATCCTACATGGGAGATGTTTGCTCTGACCCACGATCTGCTGGGATACTGCCATGTCAAGTCATAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557849.1
CDS CAA 90 bp CGACTCATGAAATGGGCATACAACTCTGTCTGGGTAATTAAGAAGTaGAGTTTTCGCTGTTGCCTCTTGGCCTCCCGCATTTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: RLMKWAYNSVWVIKK*SFRCCLLASRISSS
Trigger: GGATGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTATGCCCATTTCATGAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp CCTTCATGCACTGGTGAGCAAGCTTTCGGCTATTGGTaGGAAACAGGTTACGAGCTGAAGCTTTCTGCTTAT +
Preference number: 6 (lower is better)
Translates to: PSCTGEQAFGYW*ETGYELKLSAY
Trigger: ATAAGCAGAAAGCTTCAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS GCA 72 bp TTGCTCATAGAAAGGGTCATATGTGGAGAGCAGGCCTaGACTGTAGTACTGATATTGCTGCAACTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: LLIERVICGEQA*TVVLILLQLLV
Trigger: GACAAGGAGTTGCAGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCTATGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp GCTTATTTGCCTTTGGTAGTTCCTTTTTCACAATGCTaGGCCATACTTTCCTGCGACGAGCATTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: AYLPLVVPFSQC*AILSCDEHSAA
Trigger: AGCAGCTGAATGCTCGTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCAAATAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp CTTCATCATCGTCTTCACTCTGAGAATCAGCCTCGCTaGATTCATCACTTAGCAGAATGCTCTTTAGCCACT +
Preference number: 6 (lower is better)
Translates to: LHHRLHSENQPR*IHHLAECSLAT
Trigger: AGTGGCTAAAGAGCATTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTCAGAGTGAAGACGATGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CAA 72 bp AAATGGGCATACAACTCTGTCTGGGTAATTAAGAAGTaGAGTTTTCGCTGTTGCCTCTTGGCCTCCCGCATT +
Preference number: 6 (lower is better)
Translates to: KWAYNSVWVIKK*SFRCCLLASRI
Trigger: AATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTATGCCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp ACTGTCATCACTAGAAATATTCCTATTGAAGATAGCTaGCGTTTGTCGCAGAAAATGGTCCAACCGGAGGGC +
Preference number: 6 (lower is better)
Translates to: TVITRNIPIEDS*RLSQKMVQPEG
Trigger: GCCCTCCGGTTGGACCATTTTCTGCGACAAACGTCAGCTATCTTCAATAGGAATATTTCTAGTGATGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS TCA 72 bp TCCAGTTTCCTTAGGATTTCTTCCTGGATACCATCATaGCCCATATCTCGTTTGCGACTCATGAAATGGGCA +
Preference number: 6 (lower is better)
Translates to: SSFLRISSWIPS*PISRLRLMKWA
Trigger: TGCCCATTTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAGGAAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp GGTTCTTCCTTAACTTGTATTAAGGGATCCCCAGACTaGGGCAATAATGGATTACTGTCATCCAGTCCATCT +
Preference number: 6 (lower is better)
Translates to: GSSLTCIKGSPD*GNNGLLSSSPS
Trigger: AGATGGACTGGATGACAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTTAATACAAGTTAAGGAAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp CGTTTGCGACTCATGAAATGGGCATACAACTCTGTCTaGGTAATTAAGAAGTTGAGTTTTCGCTGTTGCCTC +
Preference number: 6 (lower is better)
Translates to: RLRLMKWAYNSV*VIKKLSFRCCL
Trigger: GAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTATGCCCATTTCATGAGTCGCAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CCA 72 bp TTAACTACCACTCCTCCACCTATATCGATTTGTCTCTaGGTAGAACTGTCTTCCAGTTTCCTTAGGATTTCT +
Preference number: 6 (lower is better)
Translates to: LTTTPPPISICL*VELSSSFLRIS
Trigger: AGAAATCCTAAGGAAACTGGAAGACAGTTCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS GCA 72 bp CTCCATTCAGAGAATATGTGTTTAACATTCCAGAACTaGCTGCTCCAGAAGTTTCACCAAGCAATGAATTTG +
Preference number: 6 (lower is better)
Translates to: LHSENMCLTFQN*LLQKFHQAMNL
Trigger: CAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAAACACATATTCTCTGAATGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000616814.4
ENST00000648947.1
CDS CAA 90 bp AGCACCTTAAATTTAGGAACAAATCTAGTAAACTCCTGGTGCCAATaGTTAAGTGTAGACGCAGGTGAAATTATTAAGAAAGGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: STLNLGTNLVNSWCQ*LSVDAGEIIKKGPQ
Trigger: TTGGGGACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACCAGGAGTTTACTAGATTTGTTCCTAAATTTAAGGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401393.7
ENST00000558357.6
ENST00000559995.2
ENST00000616814.4
ENST00000648947.1
CDS CAA 90 bp TTTACCTTAAATTTAGGAACAAATCTAGTAAACTCCTGGTGCCAATaGTTAAGTGTAGACGCAGGTGAAATTATTAAGAAAGGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: FTLNLGTNLVNSWCQ*LSVDAGEIIKKGPQ
Trigger: TTGGGGACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACCAGGAGTTTACTAGATTTGTTCCTAAATTTAAGGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561172.1