RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INKA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197852

Ensembl transcript IDs: ENST00000357260.6, ENST00000444059.2, ENST00000527570.1, ENST00000527621.1, ENST00000534365.1

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGCACCTaGGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGTGTG +
Preference number: 1 (lower is better)
Translates to: GAGRSALTAPDGEGT*GGFWLLWRRWGQGV
Trigger: CACACCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp TCACCCTTTCTCTGGCAGCACCAGCCCGAGCCCCGAGACCTCTCCTaGAGGTGGGCTTCACAGATTCCTCCACCCCATCAGGAGGGAATG +
Preference number: 1 (lower is better)
Translates to: SPFLWQHQPEPRDLS*RWASQIPPPHQEGM
Trigger: CATTCCCTCCTGATGGGGTGGAGGAATCTGTGAAGCCCACCTTCAGGAGAGGTCTCGGGGCTCGGGCTGGTGCTGCCAGAGAAAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp AAACCTCCAAGGCAGAAAGGGCTAGCAGGTCGGGTTTTGCCTCACTaGTGCTCCAGTCCCAGGAGGCCTGGGGTTCAGTCCCTGTGCCTG +
Preference number: 1 (lower is better)
Translates to: KPPRQKGLAGRVLPH*CSSPRRPGVQSLCL
Trigger: CAGGCACAGGGACTGAACCCCAGGCCTCCTGGGACTGGAGCAGCAGTGAGGCAAAACCCGACCTGCTAGCCCTTTCTGCCTTGGAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp AGCCAAGAACTCTGGCTTCTCCCCGCTTTCTGGGGGAAAGGAACTTaGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SQELWLLPAFWGKGT*SWAFESHTAHPPSS
Trigger: GGAGGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp AGCAGGTCGGGTTTTGCCTCACTGCTGCTCCAGTCCCAGGAGGCCTaGGGTTCAGTCCCTGTGCCTGGAGCAATGTCTTGCCAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: SRSGFASLLLQSQEA*GSVPVPGAMSCQRS
Trigger: GCTTCTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAACCCCAGGCCTCCTGGGACTGGAGCAGCAGTGAGGCAAAACCCGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp GTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTaGGCCAATCAGGTGGCCCTTGTACCTGCCAGGGAAGTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: VPWATKKQVEPSTDT*ANQVALVPAREVGQ
Trigger: CTGCCCCACTTCCCTGGCAGGTACAAGGGCCACCTGATTGGCCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp CCTCACTGCTGCTCCAGTCCCAGGAGGCCTGGGGTTCAGTCCCTGTaGCTGGAGCAATGTCTTGCCAAAGAAGCTGACAGAAGGTTGGGA +
Preference number: 1 (lower is better)
Translates to: PHCCSSPRRPGVQSL*LEQCLAKEADRRLG
Trigger: TCCCAACCTTCTGTCAGCTTCTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAACCCCAGGCCTCCTGGGACTGGAGCAGCAGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp ACTGCTGCTCCAGTCCCAGGAGGCCTGGGGTTCAGTCCCTGTGCCTaGAGCAATGTCTTGCCAAAGAAGCTGACAGAAGGTTGGGAGAGC +
Preference number: 1 (lower is better)
Translates to: TAAPVPGGLGFSPCA*SNVLPKKLTEGWES
Trigger: GCTCTCCCAACCTTCTGTCAGCTTCTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAACCCCAGGCCTCCTGGGACTGGAGCAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp TGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGCACCTGAGGTaGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGTGTGCTCTT +
Preference number: 1 (lower is better)
Translates to: WQKCLNCTGWGRHLR*VLAALEKVGTRCAL
Trigger: AAGAGCACACCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATaGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTG +
Preference number: 1 (lower is better)
Translates to: VLIPWCWQKCLNCTG*GRHLRWVLAALEKV
Trigger: CACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp ACAAGGGAAGTGTCTGAGGGAGAGGGAAAAGAGAGGTCCCAAGTCTaGAAGGTTGGGAAGAGAAAGGGAGGAGGGAGACCAGGCCGGCCC +
Preference number: 1 (lower is better)
Translates to: TREVSEGEGKERSQV*KVGKRKGGGRPGRP
Trigger: GGGCCGGCCTGGTCTCCCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCTCCCTCAGACACTTCCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp CCAAGTCTAGTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTaGACCGGATGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: PSLVLIPWCWQKCLN*TGWGRHLRWVLAAL
Trigger: CAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp CAGCCTCTCCCAACCACCTTCCCTTCAGTCCTGAGCCAAGAACTCTaGCTTCTCCCCGCTTTCTGGGGGAAAGGAACTTGGAGTTGGGCT +
Preference number: 1 (lower is better)
Translates to: QPLPTTFPSVLSQEL*LLPAFWGKGTWSWA
Trigger: AGCCCAACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCTCAGGACTGAAGGGAAGGTGGTTGGGAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp CCTCTGCCCTCACCTACTGTCACCTCCAGCCCCAAAGTGAGTGCATaGATGCCAGACAGACACACACATGCACACACACACACACACACG +
Preference number: 1 (lower is better)
Translates to: PLPSPTVTSSPKVSA*MPDRHTHAHTHTHT
Trigger: CGTGTGTGTGTGTGTGTGTGCATGTGTGTGTCTGTCTGGCATGCATGCACTCACTTTGGGGCTGGAGGTGACAGTAGGTGAGGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp CCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGTGTaGTCTTGCTCTTGTCCAGACCACGTAGGAAACGATGGTGTGACT +
Preference number: 1 (lower is better)
Translates to: PEVGSGCSGEGGDKV*SCSCPDHVGNDGVT
Trigger: AGTCACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp TTCCCTTCAGTCCTGAGCCAAGAACTCTGGCTTCTCCCCGCTTTCTaGGGGAAAGGAACTTGGAGTTGGGCTTTCGAGAGCCATACCGCC +
Preference number: 1 (lower is better)
Translates to: FPSVLSQELWLLPAF*GKGTWSWAFESHTA
Trigger: GGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCTCAGGACTGAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp CCCAGCAGGGACTCTTTTCTGTTCCCTGGGCCACAAAGAAGCAGGTaGAACCTTCCACAGATACCTGGGCCAATCAGGTGGCCCTTGTAC +
Preference number: 1 (lower is better)
Translates to: PSRDSFLFPGPQRSR*NLPQIPGPIRWPLY
Trigger: GTACAAGGGCCACCTGATTGGCCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAAAGAGTCCCTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp CGGAGGGCAGGAGGAAGGGAGCGATGTGGGGGCTATAGGGGACTCTaGCAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGGCTT +
Preference number: 1 (lower is better)
Translates to: RRAGGRERCGGYRGL*QLRLYRAERADQRL
Trigger: AAGCCTCTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCCCCCACATCGCTCCCTTCCTCCTGCCCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp CTTGGTCAGCCCAAAAGAAGATCCACATTGTCTTTTCCCAGCCAGTaGGTGTTCCCTACTGGAGTGGGAGGGACAGTGGCTTCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: LGQPKRRSTLSFPSQ*VFPTGVGGTVASQG
Trigger: GCCCTGGGAAGCCACTGTCCCTCCCACTCCAGTAGGGAACACTCACTGGCTGGGAAAAGACAATGTGGATCTTCTTTTGGGCTGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp GTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGTGTGCTCTTaGTCTTGTCCAGACCACGTAGGAAACGATGGTGTGACTTGGGAA +
Preference number: 1 (lower is better)
Translates to: VGSGCSGEGGDKVCS*SCPDHVGNDGVTWE
Trigger: TTCCCAAGTCACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp GGACAAGGTGTGCTCTTGCTCTTGTCCAGACCACGTAGGAAACGATaGTGTGACTTGGGAAAGATGGAGGAGCCTCTCCCCAACAAGGCC +
Preference number: 1 (lower is better)
Translates to: GQGVLLLLSRPRRKR*CDLGKMEEPLPNKA
Trigger: GGCCTTGTTGGGGAGAGGCTCCTCCATCTTTCCCAAGTCACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp GGGTGTAGGGAGTGGGAATGTTTCCTAGAGCAGGTCCTTAGGCAGTaGGGTCCTCAAGCACCTTTTCTCCAAGCTCAGCCTTTCTCCACC +
Preference number: 1 (lower is better)
Translates to: GCREWECFLEQVLRQ*GPQAPFLQAQPFST
Trigger: GGTGGAGAAAGGCTGAGCTTGGAGAAAAGGTGCTTGAGGACCCCACTGCCTAAGGACCTGCTCTAGGAAACATTCCCACTCCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR GCA 90 bp GGGGGCTCTCAAATCTTAACTCCAAGTCTAGTGCTCATACCATGGTaGTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGCACCTG +
Preference number: 1 (lower is better)
Translates to: GGSQILTPSLVLIPW*WQKCLNCTGWGRHL
Trigger: CAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGGAGTTAAGATTTGAGAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp TGGGGTTCAGTCCCTGTGCCTGGAGCAATGTCTTGCCAAAGAAGCTaGCAGAAGGTTGGGAGAGCCATAGACAGGTCTTTATTTGGGGGC +
Preference number: 1 (lower is better)
Translates to: WGSVPVPGAMSCQRS*QKVGRAIDRSLFGG
Trigger: GCCCCCAAATAAAGACCTGTCTATGGCTCTCCCAACCTTCTGTCAGCTTCTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp ACTCCAGGGTCCAGCTTCTACTCTGCAGTTAGACCTAGGCTGTTCTaGCTCCTGGCTGCAGTTGTTCCTGGACATGTAGCATATCTAGGC +
Preference number: 1 (lower is better)
Translates to: TPGSSFYSAVRPRLF*LLAAVVPGHVAYLG
Trigger: GCCTAGATATGCTACATGTCCAGGAACAACTGCAGCCAGGAGGCAGAACAGCCTAGGTCTAACTGCAGAGTAGAAGCTGGACCCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp ATCTTAACTCCAAGTCTAGTGCTCATACCATGGTGCTGGCAGAAGTaGCTTAACTGCACCGGATGGGGAAGGCACCTGAGGTGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: ILTPSLVLIPWCWQK*LNCTGWGRHLRWVL
Trigger: CAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGGAGTTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp CCCTGTGCCTGGAGCAATGTCTTGCCAAAGAAGCTGACAGAAGGTTaGGAGAGCCATAGACAGGTCTTTATTTGGGGGCCTATCTGGGGA +
Preference number: 1 (lower is better)
Translates to: PCAWSNVLPKKLTEG*ESHRQVFIWGPIWG
Trigger: TCCCCAGATAGGCCCCCAAATAAAGACCTGTCTATGGCTCTCCCAACCTTCTGTCAGCTTCTTTGGCAAGACATTGCTCCAGGCACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp GGCTCTCAAATCTTAACTCCAAGTCTAGTGCTCATACCATGGTGCTaGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGCACCTGAGG +
Preference number: 1 (lower is better)
Translates to: GSQILTPSLVLIPWC*QKCLNCTGWGRHLR
Trigger: CCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGGAGTTAAGATTTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp AGAGGGGGCTCTCAAATCTTAACTCCAAGTCTAGTGCTCATACCATaGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGCAC +
Preference number: 1 (lower is better)
Translates to: RGGSQILTPSLVLIP*CWQKCLNCTGWGRH
Trigger: GTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGGAGTTAAGATTTGAGAGCCCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp TTCTTCTGGGTTCACTTCTACCTCACTGGTGAATTGGCTGTTCTCTaGCCCAGGTGGGAGTTAAGTGCAGGAGACAGGGGTTGTGGGGTA +
Preference number: 1 (lower is better)
Translates to: FFWVHFYLTGELAVL*PRWELSAGDRGCGV
Trigger: TACCCCACAACCCCTGTCTCCTGCACTTAACTCCCACCTGGGTCAGAGAACAGCCAATTCACCAGTGAGGTAGAAGTGAACCCAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp AGATGGCTTCTCCACCAGCCAGTGTCCCACGACTTCCTCCGCTCATaGTTCAGTAGGTGGAATCTTAACATGCAGTTTCTTAGCACGCGC +
Preference number: 1 (lower is better)
Translates to: RWLLHQPVSHDFLRS*FSRWNLNMQFLSTR
Trigger: GCGCGTGCTAAGAAACTGCATGTTAAGATTCCACCTACTGAATCATGAGCGGAGGAAGTCGTGGGACACTGGCTGGTGGAGAAGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp GTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTaGTGTATTCCAGGCAGTGCTTGGACCGTAGGTGCATTATGTCCT +
Preference number: 1 (lower is better)
Translates to: VPLLRGWVVQYLLSF*CIPGSAWTVGALCP
Trigger: AGGACATAATGCACCTACGGTCCAAGCACTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR GCA 90 bp CCCACGACTTCCTCCGCTCATGATTCAGTAGGTGGAATCTTAACATaGAGTTTCTTAGCACGCGCAGGCACACACACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: PTTSSAHDSVGGILT*SFLARAGTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGCCTGCGCGTGCTAAGAAACTGCATGTTAAGATTCCACCTACTGAATCATGAGCGGAGGAAGTCGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp GCACTTTTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATaGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGT +
Preference number: 1 (lower is better)
Translates to: ALLPWVTWLVPLLRG*VVQYLLSFCCIPGS
Trigger: ACTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR GCA 90 bp CTCAAAACTGAAATGTTGGTATTCTCTGGGAAGACACAAAGGATTTaGAGTGGCTGGCTCCACCAGAGTGGGCTTGCTCAGTTGGCAAAC +
Preference number: 1 (lower is better)
Translates to: LKTEMLVFSGKTQRI*SGWLHQSGLAQLAN
Trigger: GTTTGCCAACTGAGCAAGCCCACTCTGGTGGAGCCAGCCACTGCAAATCCTTTGTGTCTTCCCAGAGAATACCAACATTTCAGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp ACAAAGTGCGCCCCAGAGGAAGAACTAAGCTCTCTGATTTCTCTCTaGTTACGTCTGCTATCTCCTCCACATACACACTGCTTACCTCTC +
Preference number: 1 (lower is better)
Translates to: TKCAPEEELSSLISL*LRLLSPPHTHCLPL
Trigger: GAGAGGTAAGCAGTGTGTATGTGGAGGAGATAGCAGACGTAAGCAGAGAGAAATCAGAGAGCTTAGTTCTTCCTCTGGGGCGCACTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp TCCACCTCCAAAGGCAGTCAGAGCCAACGTTCCCTCACTCAAAACTaGAATGTTGGTATTCTCTGGGAAGACACAAAGGATTTGCAGTGG +
Preference number: 1 (lower is better)
Translates to: STSKGSQSQRSLTQN*NVGILWEDTKDLQW
Trigger: CCACTGCAAATCCTTTGTGTCTTCCCAGAGAATACCAACATTTCAGTTTTGAGTGAGGGAACGTTGGCTCTGACTGCCTTTGGAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp ACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGTCCAGGTATaGACTGAAACCTCCAAGGCAGAAAGGGCTAGCAGGTCGGGTTTT +
Preference number: 1 (lower is better)
Translates to: THCTPYSAHFLRVQV*TETSKAERASRSGF
Trigger: AAAACCCGACCTGCTAGCCCTTTCTGCCTTGGAGGTTTCAGTCCATACCTGGACTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp ATCGGGGCAGTTTACACGCCCCCTAATAACCTCCATAGATGTGTCTaGAGAACAATGCCTTCTAGGGTCCTTCTAAGTTTGAGAGATGTG +
Preference number: 1 (lower is better)
Translates to: IGAVYTPPNNLHRCV*RTMPSRVLLSLRDV
Trigger: CACATCTCTCAAACTTAGAAGGACCCTAGAAGGCATTGTTCTCCAGACACATCTATGGAGGTTATTAGGGGGCGTGTAAACTGCCCCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp AAAATCAAGTGGCTATTTCTTCTGGGTTCACTTCTACCTCACTGGTaGATTGGCTGTTCTCTGACCCAGGTGGGAGTTAAGTGCAGGAGA +
Preference number: 1 (lower is better)
Translates to: KIKWLFLLGSLLPHW*IGCSLTQVGVKCRR
Trigger: TCTCCTGCACTTAACTCCCACCTGGGTCAGAGAACAGCCAATTCACCAGTGAGGTAGAAGTGAACCCAGAAGAAATAGCCACTTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp TATCCGAACCACTGTGACCAGTCCACGAAACACGTGAGTTATAGGTaGATGTCCAAGAAGTACCTTGGTTTCCCACAGACTCATTCCAGA +
Preference number: 1 (lower is better)
Translates to: YPNHCDQSTKHVSYR*MSKKYLGFPQTHSR
Trigger: TCTGGAATGAGTCTGTGGGAAACCAAGGTACTTCTTGGACATTCACCTATAACTCACGTGTTTCGTGGACTGGTCACAGTGGTTCGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp TCCTGGACATGTAGCATATCTAGGCTTGTTTCCTTATCTGGAAAATaGGATCATGCCTGCCTGCCTCGCTCACTTTCAAATGAGACCATG +
Preference number: 1 (lower is better)
Translates to: SWTCSISRLVSLSGK*DHACLPRSLSNETM
Trigger: CATGGTCTCATTTGAAAGTGAGCGAGGCAGGCAGGCATGATCCCATTTTCCAGATAAGGAAACAAGCCTAGATATGCTACATGTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp AGCATATCTAGGCTTGTTTCCTTATCTGGAAAATGGGATCATGCCTaGCTGCCTCGCTCACTTTCAAATGAGACCATGGAGATGAAAAGG +
Preference number: 1 (lower is better)
Translates to: SISRLVSLSGKWDHA*LPRSLSNETMEMKR
Trigger: CCTTTTCATCTCCATGGTCTCATTTGAAAGTGAGCGAGGCAGGCAGGCATGATCCCATTTTCCAGATAAGGAAACAAGCCTAGATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp CCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAACATaGTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAAATCTTAACT +
Preference number: 1 (lower is better)
Translates to: PFTDEKHKVQRDQAT*SSFHSDRGGSQILT
Trigger: AGTTAAGATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR TCA 90 bp TCTGTTCAATTTATCCGAACCACTGTGACCAGTCCACGAAACACGTaGGTTATAGGTGAATGTCCAAGAAGTACCTTGGTTTCCCACAGA +
Preference number: 1 (lower is better)
Translates to: SVQFIRTTVTSPRNT*VIGECPRSTLVSHR
Trigger: TCTGTGGGAAACCAAGGTACTTCTTGGACATTCACCTATAACTCACGTGTTTCGTGGACTGGTCACAGTGGTTCGGATAAATTGAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 90 bp GGTCCTTCTCATTGCTCTGTTCTTAGTTTCTATAACAACACCTGGTaGTGGGAGGTGTTCATAAAGTTCTGTTCAATTTATCCGAACCAC +
Preference number: 1 (lower is better)
Translates to: GPSHCSVLSFYNNTW*WEVFIKFCSIYPNH
Trigger: GTGGTTCGGATAAATTGAACAGAACTTTATGAACACCTCCCAGCACCAGGTGTTGTTATAGAAACTAAGAACAGAGCAATGAGAAGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp CCTTCTCATTGCTCTGTTCTTAGTTTCTATAACAACACCTGGTGCTaGGAGGTGTTCATAAAGTTCTGTTCAATTTATCCGAACCACTGT +
Preference number: 1 (lower is better)
Translates to: PSHCSVLSFYNNTWC*EVFIKFCSIYPNHC
Trigger: ACAGTGGTTCGGATAAATTGAACAGAACTTTATGAACACCTCCCAGCACCAGGTGTTGTTATAGAAACTAAGAACAGAGCAATGAGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 90 bp TTGGGTCCTTCTCATTGCTCTGTTCTTAGTTTCTATAACAACACCTaGTGCTGGGAGGTGTTCATAAAGTTCTGTTCAATTTATCCGAAC +
Preference number: 1 (lower is better)
Translates to: LGPSHCSVLSFYNNT*CWEVFIKFCSIYPN
Trigger: GTTCGGATAAATTGAACAGAACTTTATGAACACCTCCCAGCACCAGGTGTTGTTATAGAAACTAAGAACAGAGCAATGAGAAGGACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 90 bp CTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTaGAAAGCACAAGATTGCAAGTCAGTTGGAACTGATTCAATCTCA +
Preference number: 1 (lower is better)
Translates to: LDLALEQIWTISGIV*KAQDCKSVGTDSIS
Trigger: TGAGATTGAATCAGTTCCAACTGACTTGCAATCTTGTGCTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGGCCTGGATCACTAGGTaGCCCTCCTGGGCCACGTGC +
Preference number: 2 (lower is better)
Translates to: VLIPWCWQKCLNCTGWGRAWITR*PSWATC
Trigger: GCACGTGGCCCAGGAGGGCCACCTAGTGATCCAGGC...CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp GAGCCAAGAACTCTGGCTTCTCCCCGCTTTCTGGGGGAAAGGAACTaGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: EPRTLASPRFLGERN*ELGFREPYRPPSLL
Trigger: GAGGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGAGGATTTGCAGTGGCTaGCTCCACCAGAGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRRICSG*LHQSGL
Trigger: AAGCCCACTCTGGTGGAGCCAGCCACTGCAAATCCT...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp TATGGACTGAAACCTCCAAGGCAGAAAGGGCTAGCAGGTCGGGTTTaGCCTCACTGCTGCTCCAGTCCCAGGAGGCCTGGGGTTCAGTCC +
Preference number: 2 (lower is better)
Translates to: YGLKPPRQKGLAGRV*PHCCSSPRRPGVQS
Trigger: GGACTGAACCCCAGGCCTCCTGGGACTGGAGCAGCAGTGAGGCAAAACCCGACCTGCTAGCCCTTTCTGCCTTGGAGGTTTCAGTCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp ACAGCGCCCAGCCTGCGGGGTGCTAAGAACTGTTGGGGAGGAGTGTaGGTAACTCCAGGGTCCAGCTTCTACTCTGCAGTTAGACCTAGG +
Preference number: 2 (lower is better)
Translates to: TAPSLRGAKNCWGGV*VTPGSSFYSAVRPR
Trigger: CCTAGGTCTAACTGCAGAGTAGAAGCTGGACCCTGGAGTTACCAACACTCCTCCCCAACAGTTCTTAGCACCCCGCAGGCTGGGCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR TCA 90 bp AGAGGGAAAAGAGAGGTCCCAAGTCTGAAAGGTTGGGAAGAGAAAGGGAGGAGGCCGGCTGCCTCTAGGTaGGGAGGGAACAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: RGKREVPSLKGWEEKGRRPAASR*GGNRRP
Trigger: AGGCCTCCTGTTCCCTCCTCACCTAGAGGCAGCCGG...CCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp TCTTACCTCCTCCACCAGCTAGCCCCCAAGACAGCCTCTCCCAACCACCTTCCCCTTCTCCCCGCTTTCTaGGGGAAAGGAACTTGGAGT +
Preference number: 2 (lower is better)
Translates to: SYLLHQLAPKTASPNHLPLLPAF*GKGTWS
Trigger: ACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAG...GGGAAGGTGGTTGGGAGAGGCTGTCTTGGGGGCTAGCTGGTGGAGGAGGTAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp GTGCTCTTGCTCTTGTCCAGACCACGTAGGAAACGATGGTGTGACTaGGGAAAGATGGAGGAGCCTCTCCCCAACAAGGCCCTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: VLLLLSRPRRKRWCD*GKMEEPLPNKALGR
Trigger: CCTCCCTAGGGCCTTGTTGGGGAGAGGCTCCTCCATCTTTCCCAAGTCACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp GGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGTGTGCTCTaGCTCTTGTCCAGACCACGTAGGAAACGATGGTGTGACTTGGGA +
Preference number: 2 (lower is better)
Translates to: GGFWLLWRRWGQGVL*LLSRPRRKRWCDLG
Trigger: TCCCAAGTCACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR GCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTGGTGGCCCTTGTACCTaGCAGGGAAGTGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RAERADQRLLKTTRTWHFGGPCT*QGSGAG
Trigger: CCCTGCCCCACTTCCCTGGCAGGTACAAGGGCCACC...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGACAAAGGATTTGCAGTaGCTGGCTCCACCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: VLIPWCWQKCLNCTGWGRTKDLQ*LAPPEW
Trigger: CCACTCTGGTGGAGCCAGCCACTGCAAATCCTTTGT...CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR GCA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGCTGACAGACAGTGAGTaGTCAACAAAACCCAAAAAG +
Preference number: 2 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRLTDSE*STKPKK
Trigger: CTTTTTGGGTTTTGTTGAGCACTCACTGTCTGTCAG...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp AGAGGGAAAAGAGAGGTCCCAAGTCTGAAAGGTTGGGAAGAGAAAGGGAGGAGGTGTTCCCTACTGGAGTaGGAGGGACAGTGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: RGKREVPSLKGWEEKGRRCSLLE*EGQWLP
Trigger: GGGAAGCCACTGTCCCTCCCACTCCAGTAGGGAACA...CCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR TCA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGAGGGAGGATATTAAATaGGCTTCTAGCTCATTTGCA +
Preference number: 2 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRREDIK*ASSSFA
Trigger: TGCAAATGAGCTAGAAGCTCATTTAATATCCTCCCT...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR GCA 90 bp GGCTATAGGGGACTCTGGCAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGGGGGTTCAGTCCCTGTaGCTGGAGCAATGTCTTGCC +
Preference number: 2 (lower is better)
Translates to: GYRGLWQLRLYRAERADQGVQSL*LEQCLA
Trigger: GGCAAGACATTGCTCCAGGCACAGGGACTGAACCCC...CTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGCCCAGCACTGGGACCTaGCCCTTTCAGGCTCAGTCA +
Preference number: 2 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMPSTGT*PFQAQS
Trigger: TGACTGAGCCTGAAAGGGCCAGGTCCCAGTGCTGGG...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR TCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTCTGGTCATGAACTCCTaGCCCCAGGTAATCCGCCTG +
Preference number: 2 (lower is better)
Translates to: RAERADQRLLKTTRTWHFLVMNS*PQVIRL
Trigger: CAGGCGGATTACCTGGGGTCAGGAGTTCATGACCAG...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR TCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGAGTCCACGAAACACGTaGGTTATAGGTGAATGTCCA +
Preference number: 2 (lower is better)
Translates to: VLIPWCWQKCLNCTGWGRSPRNT*VIGECP
Trigger: TGGACATTCACCTATAACTCACGTGTTTCGTGGACT...CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR GCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGGGTGGAATCTTAACATaGAGTTTCTTAGCACGCGCA +
Preference number: 2 (lower is better)
Translates to: VLIPWCWQKCLNCTGWGRGGILT*SFLARA
Trigger: TGCGCGTGCTAAGAAACTGCATGTTAAGATTCCACC...CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGAGCCAAGAACTCTaGCTTCTCCCCGCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYLSQEL*LLPAFW
Trigger: CCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCTCAG...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTGGGTTCTGGCTGCTCTaGAGAAGGTGGGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: RAERADQRLLKTTRTWHFGFWLL*RRWGQG
Trigger: ACCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCC...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp CCACTAGGACTTGGCACTTTCAACTCTTTACCCCTTGCCAAGAATTaGAGGTCCTTAAGGGTTGACTGTGAGGGGCAGCTAGGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: PLGLGTFNSLPLAKN*RSLRVDCEGQLGCR
Trigger: CCTACACCCTAGCTGCCCCTCACAGTCAACCCTTAAGGACCTCAAATTCTTGGCAAGGGGTAAAGAGTTGAAAGTGCCAAGTCCTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR-3UTR TCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGTCCCTCACTCAAAACTaGAATGTTGGTATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: VLIPWCWQKCLNCTGWGRSLTQN*NVGILW
Trigger: CCAGAGAATACCAACATTTCAGTTTTGAGTGAGGGA...CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR GCA 90 bp TCTAAGTTTGAGAGATGTGCACATTACCTGACAGACAGTGAGTGCTCAACAAAAAAGCCGGAGCTGAGCTaGTGCCTGGCCCTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: SKFERCAHYLTDSECSTKKPELS*CLALPP
Trigger: AGGGGGAAGGGCCAGGCAGCAGCTCAGCTCCGGCTT...TTTTGTTGAGCACTCACTGTCTGTCAGGTAATGTGCACATCTCTCAAACTTAGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGTCCTTATCTGGAAAATaGGATCATGCCTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGSLSGK*DHACLP
Trigger: AGGCAGGCAGGCATGATCCCATTTTCCAGATAAGGA...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR TCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGATGAGACCATGGAGATaGAAAGGCATTCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGMRPWR*KGIQTA
Trigger: GGCTGTTTGAATGCCTTTTCATCTCCATGGTCTCAT...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGATCTTACCATTTGACTaGGTAGGATTTGAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: VLIPWCWQKCLNCTGWGRILPFD*VGFESD
Trigger: GTCACTCTCAAATCCTACCCAGTCAAATGGTAAGAT...CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR TCA 90 bp GGGGAAGGGAAAAGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCATCCACTGCATCCATTTaGGAGCAGGAGTTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: GEGKSKSPSDSQHAIYDPSTASI*EQELGP
Trigger: AGGACCCAACTCCTGCTCTCAAATGGATGCAGTGGA...TGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACTTTTCCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR GCA 90 bp GGGGAAGGGAAAAGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCAAGACCTAGGCTGTTCTaGCTCCTGGCTGCAGTTGTT +
Preference number: 2 (lower is better)
Translates to: GEGKSKSPSDSQHAIYDPRPRLF*LLAAVV
Trigger: AACAACTGCAGCCAGGAGGCAGAACAGCCTAGGTCT...TGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACTTTTCCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp AGAGGGAAAAGAGAGGTCCCAAGTCTGAAAGGTTGGGAAGAGAAAGGGAGGAGGGACTCATTCCAGACTTaGAGCTGGTGTCATCTTGAA +
Preference number: 2 (lower is better)
Translates to: RGKREVPSLKGWEEKGRRDSFQT*SWCHLE
Trigger: TTCAAGATGACACCAGCTCCAAGTCTGGAATGAGTC...CCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR TCA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGGATGTGCACATTACCTaGCAGACAGTGAGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMDVHIT*QTVSAQ
Trigger: TTGAGCACTCACTGTCTGTCAGGTAATGTGCACATC...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR GCA 90 bp CTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTGAAAAGCGCCTTCCTCCCTCCTaGAGCTCCCCCACCAAAAAT +
Preference number: 2 (lower is better)
Translates to: LLIWLWNRYGQLVGSSEKRLPPS*SSPTKN
Trigger: ATTTTTGGTGGGGGAGCTGCAGGAGGGAGGAAGGCG...CTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp CTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTGAAAAGGTGAGTGTTCCCTACTaGAGTGGGAGGGACAGTGGC +
Preference number: 2 (lower is better)
Translates to: LLIWLWNRYGQLVGSSEKVSVPY*SGRDSG
Trigger: GCCACTGTCCCTCCCACTCCAGTAGGGAACACTCAC...CTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCGAGGGTGTGCCCTCCTaGCTTGGTCAGCCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVEGVPS*LGQPKR
Trigger: TCTTTTGGGCTGACCAAGCCAGGAGGGCACACCCTC...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp GAGCCTTTTCTTACTATTTTGCCTCTCCAACTGGCTATTAATGCTTaGAGGGTGGGAAGGAATCCTGCCTCTAATTGCAGCTGTCACACC +
Preference number: 2 (lower is better)
Translates to: EPFLTILPLQLAINA*RVGRNPASNCSCHT
Trigger: GGTGTGACAGCTGCAATTAGAGGCAGGATTCCTTCCCACCCTCAAAGCATTAATAGCCAGTTGGAGAGGCAAAATAGTAAGAAAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp TCTAAGTTTGAGAGATGTGCACATTACCTGACAGACAGTGAGTGCTCAACAAAATTCAGTCCCTGTGCCTaGAGCAATGTCTTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: SKFERCAHYLTDSECSTKFSPCA*SNVLPK
Trigger: CTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAA...TTTTGTTGAGCACTCACTGTCTGTCAGGTAATGTGCACATCTCTCAAACTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp CTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTGAAAAGACCTCACTGGTGAATTaGCTGTTCTCTGACCCAGGT +
Preference number: 2 (lower is better)
Translates to: LLIWLWNRYGQLVGSSEKTSLVN*LFSDPG
Trigger: ACCTGGGTCAGAGAACAGCCAATTCACCAGTGAGGT...CTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp GGACAATTAGTGGGATCGTCTGAAAAGCACAAGATTGCAAGTCAGTaGGAACTGATTCAATCTCAATTCCACTACTGTGTGACCTTGGAC +
Preference number: 2 (lower is better)
Translates to: GQLVGSSEKHKIASQ*ELIQSQFHYCVTLD
Trigger: GTCCAAGGTCACACAGTAGTGGAATTGAGATTGAATCAGTTCCAACTGACTTGCAATCTTGTGCTTTTCAGACGATCCCACTAATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp GATCCACGCAGGACCATGAATAATATGAGAGGACAGATTTTGCTCTaGTTCCTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTG +
Preference number: 2 (lower is better)
Translates to: DPRRTMNNMRGQILL*FLLIWLWNRYGQLV
Trigger: CACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAGGAACAAGAGCAAAATCTGTCCTCTCATATTATTCATGGTCCTGCGTGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CCA 90 bp CTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTGAAAAGTTCTATAACAACACCTaGTGCTGGGAGGTGTTCATA +
Preference number: 2 (lower is better)
Translates to: LLIWLWNRYGQLVGSSEKFYNNT*CWEVFI
Trigger: TATGAACACCTCCCAGCACCAGGTGTTGTTATAGAA...CTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 90 bp ATTTATGATCCACGCAGGACCATGAATAATATGAGAGGACAGATTTaGCTCTTGTTCCTCTTGATTTGGCTTTGGAACAGATATGGACAA +
Preference number: 2 (lower is better)
Translates to: IYDPRRTMNNMRGQI*LLFLLIWLWNRYGQ
Trigger: TTGTCCATATCTGTTCCAAAGCCAAATCAAGAGGAACAAGAGCAAAATCTGTCCTCTCATATTATTCATGGTCCTGCGTGGATCATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp GTGCCCAGAGTGGCTTTAGAGAAGCCGGAGCTGAGCTaGTGCCTGGCCCTTCCCCCTCCGTCCCGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: VPRVALEKPELS*CLALPPPSRLP
Trigger: AGGCAGCCGGGACGGAGGGGGAAGGGCCAGGCAGCAGCTCAGCTCCGGCTTCTCTAAAGCCACTCTGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp AAAGGGAGGAGGGAGACCAGGCCGGCCCCACTAGCATaGCCAGCAGGGACTCTTTTCTGTTCCCTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: KGRRETRPAPLA*PAGTLFCSLGH
Trigger: GTGGCCCAGGGAACAGAAAAGAGTCCCTGCTGGGCATGCTAGTGGGGCCGGCCTGGTCTCCCTCCTCCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp CAGAAAGGGCTAGCAGGTCGGGTTTTGCCTCACTGCTaGTCCAGTCCCAGGAGGCCTGGGGTTCAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: QKGLAGRVLPHC*SSPRRPGVQSL
Trigger: CAGGGACTGAACCCCAGGCCTCCTGGGACTGGAGCAGCAGTGAGGCAAAACCCGACCTGCTAGCCCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp AGGCAGAAAGGGCTAGCAGGTCGGGTTTTGCCTCACTaGTGCTCCAGTCCCAGGAGGCCTGGGGTTCAGTCC +
Preference number: 3 (lower is better)
Translates to: RQKGLAGRVLPH*CSSPRRPGVQS
Trigger: GGACTGAACCCCAGGCCTCCTGGGACTGGAGCAGCAGTGAGGCAAAACCCGACCTGCTAGCCCTTTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp GCCACAGCGCCCAGCCTGCGGGGTGCTAAGAACTGTTaGGGAGGAGTGTTGGTAACTCCAGGGTCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: ATAPSLRGAKNC*GGVLVTPGSSF
Trigger: GAAGCTGGACCCTGGAGTTACCAACACTCCTCCCCAACAGTTCTTAGCACCCCGCAGGCTGGGCGCTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp TGCCTTAACTGCACCGGATGGGGAAGGCACCTGAGGTaGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGG +
Preference number: 3 (lower is better)
Translates to: CLNCTGWGRHLR*VLAALEKVGTR
Trigger: CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp CCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATaGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PWCWQKCLNCTG*GRHLRWVLAAL
Trigger: CAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp AGAAGTGCCTTAACTGCACCGGATGGGGAAGGCACCTaGGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: RSALTAPDGEGT*GGFWLLWRRWG
Trigger: TCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp CTCTGGCTTCTCCCCGCTTTCTGGGGGAAAGGAACTTaGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCT +
Preference number: 3 (lower is better)
Translates to: LWLLPAFWGKGT*SWAFESHTAHP
Trigger: AGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp CAAGACAGCCTCTCCCAACCACCTTCCCTTCAGTCCTaGGCCAAGAACTCTGGCTTCTCCCCGCTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: QDSLSQPPSLQS*AKNSGFSPLSG
Trigger: CCCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCTCAGGACTGAAGGGAAGGTGGTTGGGAGAGGCTGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp TGCTCCAGTCCCAGGAGGCCTGGGGTTCAGTCCCTGTaGCTGGAGCAATGTCTTGCCAAAGAAGCTGACAGA +
Preference number: 3 (lower is better)
Translates to: CSSPRRPGVQSL*LEQCLAKEADR
Trigger: TCTGTCAGCTTCTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAACCCCAGGCCTCCTGGGACTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTaGACCGGATGGGGAAGGCACCTGAGGTGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: VLIPWCWQKCLN*TGWGRHLRWVL
Trigger: CAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp CCAGTCCCAGGAGGCCTGGGGTTCAGTCCCTGTGCCTaGAGCAATGTCTTGCCAAAGAAGCTGACAGAAGGT +
Preference number: 3 (lower is better)
Translates to: PVPGGLGFSPCA*SNVLPKKLTEG
Trigger: ACCTTCTGTCAGCTTCTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAACCCCAGGCCTCCTGGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp GCATGGGGGAGACGCGGGGAGTGTCTAGGGCTTCCCTaGCTGCTCCTTACACACTGTACTCCTTATTCAGCT +
Preference number: 3 (lower is better)
Translates to: AWGRRGECLGLP*LLLTHCTPYSA
Trigger: AGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAAGCCCTAGACACTCCCCGCGTCTCCCCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp TGGCTGCAGTTTGAGCTGCTTTCCCCTAGGCCTTTCTaGTTCAGTCACCCTTTCTCTGGCAGCACCAGCCCG +
Preference number: 3 (lower is better)
Translates to: WLQFELLSPRPF*FSHPFSGSTSP
Trigger: CGGGCTGGTGCTGCCAGAGAAAGGGTGACTGAACCAGAAAGGCCTAGGGGAAAGCAGCTCAAACTGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp GGCTGCTCTGGAGAAGGTGGGGACAAGGTGTGCTCTTaGTCTTGTCCAGACCACGTAGGAAACGATGGTGTG +
Preference number: 3 (lower is better)
Translates to: GCSGEGGDKVCS*SCPDHVGNDGV
Trigger: CACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTCCCCACCTTCTCCAGAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp CCAAGTCTAGTGCTCATACCATGGTGCTGGCAGAAGTaGCTTAACTGCACCGGATGGGGAAGGCACCTGAGG +
Preference number: 3 (lower is better)
Translates to: PSLVLIPWCWQK*LNCTGWGRHLR
Trigger: CCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp CCAACCACCTTCCCTTCAGTCCTGAGCCAAGAACTCTaGCTTCTCCCCGCTTTCTGGGGGAAAGGAACTTGG +
Preference number: 3 (lower is better)
Translates to: PTTFPSVLSQEL*LLPAFWGKGTW
Trigger: CCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCTCAGGACTGAAGGGAAGGTGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp GCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTaGGCCAATCAGGTGGCCCTTGTACCTGCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: ATKKQVEPSTDT*ANQVALVPARE
Trigger: TTCCCTGGCAGGTACAAGGGCCACCTGATTGGCCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp TCTTGTCCAGACCACGTAGGAAACGATGGTGTGACTTaGGAAAGATGGAGGAGCCTCTCCCCAACAAGGCCC +
Preference number: 3 (lower is better)
Translates to: SCPDHVGNDGVT*ERWRSLSPTRP
Trigger: GGGCCTTGTTGGGGAGAGGCTCCTCCATCTTTCCCAAGTCACACCATCGTTTCCTACGTGGTCTGGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp GTGCTCTTGCTCTTGTCCAGACCACGTAGGAAACGATaGTGTGACTTGGGAAAGATGGAGGAGCCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: VLLLLSRPRRKR*CDLGKMEEPLP
Trigger: GGGGAGAGGCTCCTCCATCTTTCCCAAGTCACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CAA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGGTTCAACGGAGGTCTTaGGGGGCAGTGGAGATGTCA +
Preference number: 3 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGVQRRS*GAVEMS
Trigger: TGACATCTCCACTGCCCCCAAAGACCTCCGTTGAAC...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp TCACCTACTGTCACCTCCAGCCCCAAAGTGAGTGCATaGATGCCAGACAGACACACACATGCACACACACAC +
Preference number: 3 (lower is better)
Translates to: SPTVTSSPKVSA*MPDRHTHAHTH
Trigger: GTGTGTGTGTGCATGTGTGTGTCTGTCTGGCATGCATGCACTCACTTTGGGGCTGGAGGTGACAGTAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp CTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTaGTGTATTCCAGGCAGTGCTTGGACCGTAGGTGCA +
Preference number: 3 (lower is better)
Translates to: LRGWVVQYLLSF*CIPGSAWTVGA
Trigger: TGCACCTACGGTCCAAGCACTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR CCA 72 bp GACTCTTTTCTGTTCCCTGGGCCACAAAGAAGCAGGTaGAACCTTCCACAGATACCTGGGCCAATCAGGTGG +
Preference number: 3 (lower is better)
Translates to: DSFLFPGPQRSR*NLPQIPGPIRW
Trigger: CCACCTGATTGGCCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp GAGTGGGAATGTTTCCTAGAGCAGGTCCTTAGGCAGTaGGGTCCTCAAGCACCTTTTCTCCAAGCTCAGCCT +
Preference number: 3 (lower is better)
Translates to: EWECFLEQVLRQ*GPQAPFLQAQP
Trigger: AGGCTGAGCTTGGAGAAAAGGTGCTTGAGGACCCCACTGCCTAAGGACCTGCTCTAGGAAACATTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR TCA 72 bp GTTCACTTCTACCTCACTGGTGAATTGGCTGTTCTCTaGCCCAGGTGGGAGTTAAGTGCAGGAGACAGGGGT +
Preference number: 3 (lower is better)
Translates to: VHFYLTGELAVL*PRWELSAGDRG
Trigger: ACCCCTGTCTCCTGCACTTAACTCCCACCTGGGTCAGAGAACAGCCAATTCACCAGTGAGGTAGAAGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp CCCAAAAGAAGATCCACATTGTCTTTTCCCAGCCAGTaGGTGTTCCCTACTGGAGTGGGAGGGACAGTGGCT +
Preference number: 3 (lower is better)
Translates to: PKRRSTLSFPSQ*VFPTGVGGTVA
Trigger: AGCCACTGTCCCTCCCACTCCAGTAGGGAACACTCACTGGCTGGGAAAAGACAATGTGGATCTTCTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp TCCAGCTTCTACTCTGCAGTTAGACCTAGGCTGTTCTaGCTCCTGGCTGCAGTTGTTCCTGGACATGTAGCA +
Preference number: 3 (lower is better)
Translates to: SSFYSAVRPRLF*LLAAVVPGHVA
Trigger: TGCTACATGTCCAGGAACAACTGCAGCCAGGAGGCAGAACAGCCTAGGTCTAACTGCAGAGTAGAAGCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp GACACAAAGGATTTGCAGTGGCTGGCTCCACCAGAGTaGGCTTGCTCAGTTGGCAAACTCCAGGTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: DTKDLQWLAPPE*ACSVGKLQVEK
Trigger: TTTCTCTACCTGGAGTTTGCCAACTGAGCAAGCCCACTCTGGTGGAGCCAGCCACTGCAAATCCTTTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp GTCCCTGTGCCTGGAGCAATGTCTTGCCAAAGAAGCTaGCAGAAGGTTGGGAGAGCCATAGACAGGTCTTTA +
Preference number: 3 (lower is better)
Translates to: VPVPGAMSCQRS*QKVGRAIDRSL
Trigger: TAAAGACCTGTCTATGGCTCTCCCAACCTTCTGTCAGCTTCTTTGGCAAGACATTGCTCCAGGCACAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp GAAATGTTGGTATTCTCTGGGAAGACACAAAGGATTTaGAGTGGCTGGCTCCACCAGAGTGGGCTTGCTCAG +
Preference number: 3 (lower is better)
Translates to: EMLVFSGKTQRI*SGWLHQSGLAQ
Trigger: CTGAGCAAGCCCACTCTGGTGGAGCCAGCCACTGCAAATCCTTTGTGTCTTCCCAGAGAATACCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp ATCTTAACTCCAAGTCTAGTGCTCATACCATGGTGCTaGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: ILTPSLVLIPWC*QKCLNCTGWGR
Trigger: CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGGAGTTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp AAGGCAAGGGACATCCTAGTAATCGTACTAAGGGGATaGCTGCAGTTTGAGCTGCTTTCCCCTAGGCCTTTC +
Preference number: 3 (lower is better)
Translates to: KARDILVIVLRG*LQFELLSPRPF
Trigger: GAAAGGCCTAGGGGAAAGCAGCTCAAACTGCAGCCATCCCCTTAGTACGATTACTAGGATGTCCCTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CAA 90 bp TTCCCTGGCTGCTCCTTACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGCTGGGGGAAAGGAACTaGGAGTTGGGCTTTCGAGAG +
Preference number: 3 (lower is better)
Translates to: FPGCSLHTVLLIQLIFSELGERN*ELGFRE
Trigger: CTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAG...CTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp CTCCACCAGCCAGTGTCCCACGACTTCCTCCGCTCATaGTTCAGTAGGTGGAATCTTAACATGCAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: LHQPVSHDFLRS*FSRWNLNMQFL
Trigger: AAGAAACTGCATGTTAAGATTCCACCTACTGAATCATGAGCGGAGGAAGTCGTGGGACACTGGCTGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp TCCTCCGCTCATGATTCAGTAGGTGGAATCTTAACATaGAGTTTCTTAGCACGCGCAGGCACACACACACAC +
Preference number: 3 (lower is better)
Translates to: SSAHDSVGGILT*SFLARAGTHTH
Trigger: GTGTGTGTGTGTGCCTGCGCGTGCTAAGAAACTGCATGTTAAGATTCCACCTACTGAATCATGAGCGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp CAAATCTTAACTCCAAGTCTAGTGCTCATACCATGGTaGTGGCAGAAGTGCCTTAACTGCACCGGATGGGGA +
Preference number: 3 (lower is better)
Translates to: QILTPSLVLIPW*WQKCLNCTGWG
Trigger: TCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGGAGTTAAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp TGGAGCAATGTCTTGCCAAAGAAGCTGACAGAAGGTTaGGAGAGCCATAGACAGGTCTTTATTTGGGGGCCT +
Preference number: 3 (lower is better)
Translates to: WSNVLPKKLTEG*ESHRQVFIWGP
Trigger: AGGCCCCCAAATAAAGACCTGTCTATGGCTCTCCCAACCTTCTGTCAGCTTCTTTGGCAAGACATTGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp CCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATaGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATT +
Preference number: 3 (lower is better)
Translates to: PWVTWLVPLLRG*VVQYLLSFCCI
Trigger: AATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR-3UTR CAA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTAAACGATGGTGTGACTaGGGAAAGATGGAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: RAERADQRLLKTTRTWHFKRWCD*GKMEEP
Trigger: AGGCTCCTCCATCTTTCCCAAGTCACACCATCGTTT...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CAA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTCCCCTTGCCAAGAATTaGAGGTCCTTAAGGGTTGAC +
Preference number: 3 (lower is better)
Translates to: RAERADQRLLKTTRTWHFPLAKN*RSLRVD
Trigger: GTCAACCCTTAAGGACCTCAAATTCTTGGCAAGGGG...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR TCA 72 bp TGGCTATTTCTTCTGGGTTCACTTCTACCTCACTGGTaGATTGGCTGTTCTCTGACCCAGGTGGGAGTTAAG +
Preference number: 3 (lower is better)
Translates to: WLFLLGSLLPHW*IGCSLTQVGVK
Trigger: CTTAACTCCCACCTGGGTCAGAGAACAGCCAATTCACCAGTGAGGTAGAAGTGAACCCAGAAGAAATAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp CTCTGCTTACGTCTGCTATCTCCTCCACATACACACTaGTTACCTCTCCCTACACCTTCCTGTATACTTAGG +
Preference number: 3 (lower is better)
Translates to: LCLRLLSPPHTH*LPLPTPSCILR
Trigger: CCTAAGTATACAGGAAGGTGTAGGGAGAGGTAAGCAGTGTGTATGTGGAGGAGATAGCAGACGTAAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp GATGAGAAACACAAGGTTCAGAGAGATCAAGCAACATaGTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAA +
Preference number: 3 (lower is better)
Translates to: DEKHKVQRDQAT*SSFHSDRGGSQ
Trigger: TTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTGTTTCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR CCA 72 bp ACTCCTTATTCAGCTCATTTTCTCAGAGTCCAGGTATaGACTGAAACCTCCAAGGCAGAAAGGGCTAGCAGG +
Preference number: 3 (lower is better)
Translates to: TPYSAHFLRVQV*TETSKAERASR
Trigger: CCTGCTAGCCCTTTCTGCCTTGGAGGTTTCAGTCCATACCTGGACTCTGAGAAAATGAGCTGAATAAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp TCTCAAATCTTAACTCCAAGTCTAGTGCTCATACCATaGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGG +
Preference number: 3 (lower is better)
Translates to: SQILTPSLVLIP*CWQKCLNCTGW
Trigger: CCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGGAGTTAAGATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CAA 90 bp CAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTGAAAGGAACTTGGAGTaGGGCTTTCGAGAGCCATAC +
Preference number: 3 (lower is better)
Translates to: QLRLYRAERADQRLLKTTERNLE*GFREPY
Trigger: GTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTC...AGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR-3UTR CAA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGGTAGCATATCTAGGCTaGTTTCCTTATCTGGAAAAT +
Preference number: 3 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGVAYLG*FPYLEN
Trigger: ATTTTCCAGATAAGGAAACAAGCCTAGATATGCTAC...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp CACTGTGACCAGTCCACGAAACACGTGAGTTATAGGTaGATGTCCAAGAAGTACCTTGGTTTCCCACAGACT +
Preference number: 3 (lower is better)
Translates to: HCDQSTKHVSYR*MSKKYLGFPQT
Trigger: AGTCTGTGGGAAACCAAGGTACTTCTTGGACATTCACCTATAACTCACGTGTTTCGTGGACTGGTCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp GTTTACACGCCCCCTAATAACCTCCATAGATGTGTCTaGAGAACAATGCCTTCTAGGGTCCTTCTAAGTTTG +
Preference number: 3 (lower is better)
Translates to: VYTPPNNLHRCV*RTMPSRVLLSL
Trigger: CAAACTTAGAAGGACCCTAGAAGGCATTGTTCTCCAGACACATCTATGGAGGTTATTAGGGGGCGTGTAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp AGGGTCCTTCTAAGTTTGAGAGATGTGCACATTACCTaGCAGACAGTGAGTGCTCAACAAAACCCAAAAAGC +
Preference number: 3 (lower is better)
Translates to: RVLLSLRDVHIT*QTVSAQQNPKS
Trigger: GCTTTTTGGGTTTTGTTGAGCACTCACTGTCTGTCAGGTAATGTGCACATCTCTCAAACTTAGAAGGACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp TTTATCCGAACCACTGTGACCAGTCCACGAAACACGTaGGTTATAGGTGAATGTCCAAGAAGTACCTTGGTT +
Preference number: 3 (lower is better)
Translates to: FIRTTVTSPRNT*VIGECPRSTLV
Trigger: AACCAAGGTACTTCTTGGACATTCACCTATAACTCACGTGTTTCGTGGACTGGTCACAGTGGTTCGGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp ATCTCACAGCAGCCCCACATTATCACCTTTCACAGATaGGAAACACAAGGTTCAGAGAGATCAAGCAACATG +
Preference number: 3 (lower is better)
Translates to: ISQQPHIITFHR*ETQGSERSSNM
Trigger: CATGTTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR CCA 72 bp TGTAGCATATCTAGGCTTGTTTCCTTATCTGGAAAATaGGATCATGCCTGCCTGCCTCGCTCACTTTCAAAT +
Preference number: 3 (lower is better)
Translates to: CSISRLVSLSGK*DHACLPRSLSN
Trigger: ATTTGAAAGTGAGCGAGGCAGGCAGGCATGATCCCATTTTCCAGATAAGGAAACAAGCCTAGATATGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp GCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTaGAAAGCACAAGATTGCAAGTCAGTTGGAACTGAT +
Preference number: 3 (lower is better)
Translates to: ALEQIWTISGIV*KAQDCKSVGTD
Trigger: ATCAGTTCCAACTGACTTGCAATCTTGTGCTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp TGCTCTGTTCTTAGTTTCTATAACAACACCTGGTGCTaGGAGGTGTTCATAAAGTTCTGTTCAATTTATCCG +
Preference number: 3 (lower is better)
Translates to: CSVLSFYNNTWC*EVFIKFCSIYP
Trigger: CGGATAAATTGAACAGAACTTTATGAACACCTCCCAGCACCAGGTGTTGTTATAGAAACTAAGAACAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp AGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATaGTTCAAAGTCTGCTTATTTTCCACTGCATCCATT +
Preference number: 3 (lower is better)
Translates to: SFQSPKSLLTNQ*FKVCLFSTASI
Trigger: AATGGATGCAGTGGAAAATAAGCAGACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CCA 72 bp TCTCATTGCTCTGTTCTTAGTTTCTATAACAACACCTaGTGCTGGGAGGTGTTCATAAAGTTCTGTTCAATT +
Preference number: 3 (lower is better)
Translates to: SHCSVLSFYNNT*CWEVFIKFCSI
Trigger: AATTGAACAGAACTTTATGAACACCTCCCAGCACCAGGTGTTGTTATAGAAACTAAGAACAGAGCAATGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp AAGTTGAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTaGCTAACCAATGGTTCAAAGTCTGCTTATTTTCCA +
Preference number: 3 (lower is better)
Translates to: KLKQVFSLPSLF*LTNGSKSAYFP
Trigger: TGGAAAATAAGCAGACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTCAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR GCA 72 bp CATTGCTCTGTTCTTAGTTTCTATAACAACACCTGGTaGTGGGAGGTGTTCATAAAGTTCTGTTCAATTTAT +
Preference number: 3 (lower is better)
Translates to: HCSVLSFYNNTW*WEVFIKFCSIY
Trigger: ATAAATTGAACAGAACTTTATGAACACCTCCCAGCACCAGGTGTTGTTATAGAAACTAAGAACAGAGCAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR TCA 72 bp TACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTaGCCCTTGCTACAATCCTGTGAGATATTAAATCAA +
Preference number: 3 (lower is better)
Translates to: YSVQKHVTYCLL*PLLQSCEILNQ
Trigger: TTGATTTAATATCTCACAGGATTGTAGCAAGGGTCAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGACCTTCAGGGCTGCCTaGCACAGGACCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRTFRAA*HRTPSR
Trigger: TCTGGAGGGGGTCCTGTGCCAGGCAGCCCTGAAGGT...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGCTGGTCATGAACTCCTaGCCCCAGGTAATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRLVMNS*PQVIRL
Trigger: CAGGCGGATTACCTGGGGTCAGGAGTTCATGACCAG...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp GCTTCTCCCCGCTTTCTGGGGGAAAGGAACTTGGAGTaGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ASPRFLGERNLE*GFREPYRPPSL
Trigger: GAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp ACACACGCACAGCTCACTCTCCAGCTACTCTTACCTCCTCCACCAGCTAGCCCCCACACCCCATCAGGCTaGGGGACAATCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: THAQLTLQLLLPPPPASPHTPSG*GTISGR
Trigger: CCTCCCACTGATTGTCCCTCAGCCTGATGGGGTGTG...GGGGCTAGCTGGTGGAGGAGGTAAGAGTAGCTGGAGAGTGAGCTGTGCGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATGGCCCCACTGGAAACTaGGCTCCGGGCCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYGPTGN*APGRLP
Trigger: GGGGAGCCGGCCCGGAGCGCAGTTTCCAGTGGGGCC...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATGGGGAAGGGGGTGTCACCCAGCCTaGCTTCTCCTTCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VLIPWCWQKCLNCTGWGRGCHPA*LLLQQP
Trigger: CGGCTGCTGAAGGAGAAGCCAGGCTGGGTGACACCC...CCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GGGAAAGGAACTTGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCTGTTCCCTACTGGAGTaGGAGGGACAGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GKGTWSWAFESHTAHPPSCSLLE*EGQWLP
Trigger: GGGAAGCCACTGTCCCTCCCACTCCAGTAGGGAACA...GGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GCTGAGCTTCTGCTGTATTCCAGGCAGTGCTTGGACCGTAGGTGCATTATGTCCGGCAGAGAGGGGCAGTaGGAGGGTGTGCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AELLLYSRQCLDRRCIMSGREGQ*EGVPSW
Trigger: CCAGGAGGGCACACCCTCCCACTGCCCCTCTCTGCC...GGACATAATGCACCTACGGTCCAAGCACTGCCTGGAATACAGCAGAAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp ACTCTGGCTTCTCCCCGCTTTCTGGGGGAAAGGAACTaGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: TLASPRFLGERN*ELGFREPYRPP
Trigger: GGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAGCCAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TCTTACCTCCTCCACCAGCTAGCCCCCAAGACAGCCTCTCCCAACCACCTTCCCTGCTCTCCATCGTCATaGGCCCATTTGTCGGGTTCG +
Preference number: 4 (lower is better)
Translates to: SYLLHQLAPKTASPNHLPCSPSS*AHLSGS
Trigger: CGAACCCGACAAATGGGCGCATGACGATGGAGAGCA...GGGAAGGTGGTTGGGAGAGGCTGTCTTGGGGGCTAGCTGGTGGAGGAGGTAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCCTGTCAGGGCGAACCTaGGGCCCAGCTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCLSGRT*GPAPGA
Trigger: AGCCCCAGGAGCTGGGCCGCAGGTTCGCCCTGACAG...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTAAACCCCGGCCCCACTaGAAACTGCGCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSKPRPH*KLRSGP
Trigger: CGGCCCGGAGCGCAGTTTCCAGTGGGGCCGGGGTTT...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGAAACCCCGGCCCCACTaGAAACTGCGCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQKPRPH*KLRSGP
Trigger: CGGCCCGGAGCGCAGTTTCCAGTGGGGCCGGGGTTT...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp CAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAAATCTTAACTCAGAGAGGGCCCGGGTaGAACCCCGGCCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: QATCSSFHSDRGGSQILTQRGPG*NPGPTG
Trigger: TCCAGTGGGGCCGGGGTTTCACCCGGGCCCTCTCTG...AGTTAAGATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAAGCCGGAGCTGAGCTaGTGCCTGGCCCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LLRGWVVQYLLSFCCIPGKPELS*CLALPP
Trigger: AGGGGGAAGGGCCAGGCAGCAGCTCAGCTCCGGCTT...GCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCGGTGGCCCTTGTACCTaGCAGGGAAGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCGGPCT*QGSGAG
Trigger: CCCTGCCCCACTTCCCTGGCAGGTACAAGGGCCACC...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GGGAAAGGAACTTGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCCAAGAGAAGGTTGACTaGAGGGGGAACAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GKGTWSWAFESHTAHPPSQEKVD*RGNRLW
Trigger: CCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTG...GGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACACACGCACAGCTCACTCTCCAGCTACTCTTACCTCCTCCACCAGCTAGCCCCAGCACAGCTTTGATGTaGCTGTGTCCTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: THAQLTLQLLLPPPPASPSTALM*LCPGQG
Trigger: CCCTTGCCCAGGACACAGCCACATCAAAGCTGTGCT...GGGGCTAGCTGGTGGAGGAGGTAAGAGTAGCTGGAGAGTGAGCTGTGCGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACACACGCACAGCTCACTCTCCAGCTACTCTTACCTCCTCCACCAGCTAGCCCCCTGCTCTGGAGAAGGTaGGGACAAGGTGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: THAQLTLQLLLPPPPASPLLWRR*GQGVLL
Trigger: CAAGAGCACACCTTGTCCCCACCTTCTCCAGAGCAG...GGGGCTAGCTGGTGGAGGAGGTAAGAGTAGCTGGAGAGTGAGCTGTGCGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGCTCGCAGCGCGGAGCTaGGCCTGCGCTCCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRLAARS*ACAPSP
Trigger: CGGGCTCGGAGCGCAGGCTCAGCTCCGCGCTGCGAG...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCCGGCTGCCTCTAGGTaGGGAGGGAACAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYPAASR*GGNRRP
Trigger: AGGCCTCCTGTTCCCTCCTCACCTAGAGGCAGCCGG...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGGCAAGTCTAGCCAATTaGCCACCAGGTCTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRASLAN*PPGLQK
Trigger: TTTTTGCAGACCTGGTGGGCAATTGGCTAGACTTGC...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp ACACACGCACAGCTCACTCTCCAGCTACTCTTACCTCCTCCACCAGCTAGCCCCCAGCCCCAAAGTGAGTaGATGCATGCCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: THAQLTLQLLLPPPPASPQPQSE*MHARQT
Trigger: TGTCTGTCTGGCATGCATGCACTCACTTTGGGGCTG...GGGGCTAGCTGGTGGAGGAGGTAAGAGTAGCTGGAGAGTGAGCTGTGCGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTGCTCGCACTGGGTCCTaGGACCTTCAGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HMVSASTKGMGCPVSAELARTGS*DLQGCL
Trigger: CAGGCAGCCCTGAAGGTCCCAGGACCCAGTGCGAGC...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp GGGAAAGGAACTTGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCCCACAGACACTCCTATaGGATGGAAACTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKGTWSWAFESHTAHPPSPQTLL*DGNLVL
Trigger: CAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGG...GGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCCAGTCCCAGGAGGCCTaGGGTTCAGTCCCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCQSQEA*GSVPVP
Trigger: AGGCACAGGGACTGAACCCCAGGCCTCCTGGGACTG...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTACTAGGTGGCCCTCCTaGGCCACGTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: HMVSASTKGMGCPVSAELTRWPS*ATCPEW
Trigger: CCACTCTGGGCACGTGGCCCAGGAGGGCCACCTAGT...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCCAGTCACCCTTTCTCTaGCAGCACCAGCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCQSPFL*QHQPEP
Trigger: GGGCTCGGGCTGGTGCTGCCAGAGAAAGGGTGACTG...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCTTCTTGACCTTCTGTaGGCGGCCGGTTCGGGACTC +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSLLDLL*AAGSGL
Trigger: GAGTCCCGAACCGGCCGCTCACAGAAGGTCAAGAAG...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GGCTATAGGGGACTCTGGCAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGGATGGGGAAGGCACCTaGGGTGGGTTCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GYRGLWQLRLYRAERADQDGEGT*GGFWLL
Trigger: GAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATC...CTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp GGCTATAGGGGACTCTGGCAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGGCCTGGCAGGACCTCTaGCACCCTCCCAACAAGGGT +
Preference number: 4 (lower is better)
Translates to: GYRGLWQLRLYRAERADQAWQDL*HPPNKG
Trigger: ACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGC...CTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTATGATCTCGCCTCACTaGAACCTCCCTCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSMISPH*NLPLPG
Trigger: GCCCGGGAGAGGGAGGTTGCAGTGAGGCGAGATCAT...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTCCGGCCCCACTAGCATaGCCAGCAGGGACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSPAPLA*PAGTLF
Trigger: GAAAAGAGTCCCTGCTGGGCATGCTAGTGGGGCCGG...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp ACACACGCACAGCTCACTCTCCAGCTACTCTTACCTCCTCCACCAGCTAGCCCCGACAAGGTGTGCTCTTaGTCTTGTCCAGACCACGTA +
Preference number: 4 (lower is better)
Translates to: THAQLTLQLLLPPPPASPDKVCS*SCPDHV
Trigger: TACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTC...GGGGCTAGCTGGTGGAGGAGGTAAGAGTAGCTGGAGAGTGAGCTGTGCGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCAAGGGTGCTCGCACTaGGTCCTGGGACCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYQGCSH*VLGPSG
Trigger: CCCTGAAGGTCCCAGGACCCAGTGCGAGCACCCTTG...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCAAGGGTGCTCGCACTaGGTCCTGGGACCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: HMVSASTKGMGCPVSAELQGCSH*VLGPSG
Trigger: CCCTGAAGGTCCCAGGACCCAGTGCGAGCACCCTTG...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATGGGACTCAGGGACCATaGGTGTCACCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYGTQGP*VSPSLA
Trigger: AGCCAGGCTGGGTGACACCCATGGTCCCTGAGTCCC...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACACACGCACAGCTCACTCTCCAGCTACTCTTACCTCCTCCACCAGCTAGCCCCCTCAGAGTCCAGGTATaGACTGAAACCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: THAQLTLQLLLPPPPASPLRVQV*TETSKA
Trigger: TGCCTTGGAGGTTTCAGTCCATACCTGGACTCTGAG...GGGGCTAGCTGGTGGAGGAGGTAAGAGTAGCTGGAGAGTGAGCTGTGCGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGAGGAGACAGGGGTTGTaGGGTATGGGGCCCTACGAA +
Preference number: 4 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGRRQGL*GMGPYE
Trigger: TTCGTAGGGCCCCATACCCCACAACCCCTGTCTCCT...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGGCCCTAGGGAGGAGATaGGGATGTGGAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGALGRR*GCGEDR
Trigger: TCTGTCCTCTCCACATCCCCATCTCCTCCCTAGGGC...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GCTGAGCTTCTGCTGTATTCCAGGCAGTGCTTGGACCGTAGGTGCATTATGTCCGGGTTCTGGCTGCTCTaGAGAAGGTGGGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: AELLLYSRQCLDRRCIMSGFWLL*RRWGQG
Trigger: ACCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCC...GGACATAATGCACCTACGGTCCAAGCACTGCCTGGAATACAGCAGAAGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGGGAAGGCACCTGAGGTaGGTTCTGGCTGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQGRHLR*VLAALE
Trigger: CTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCC...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp AGCCTGCGGGGTGCTAAGAACTGTTGGGGAGGAGTGTaGGTAACTCCAGGGTCCAGCTTCTACTCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLRGAKNCWGGV*VTPGSSFYSAV
Trigger: AACTGCAGAGTAGAAGCTGGACCCTGGAGTTACCAACACTCCTCCCCAACAGTTCTTAGCACCCCGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp CTCTTGTCCAGACCACGTAGGAAACGATGGTGTGACTaGGGAAAGATGGAGGAGCCTCTCCCCAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLSRPRRKRWCD*GKMEEPLPNKA
Trigger: GGCCTTGTTGGGGAGAGGCTCCTCCATCTTTCCCAAGTCACACCATCGTTTCCTACGTGGTCTGGACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp TGGCTGCTCTGGAGAAGGTGGGGACAAGGTGTGCTCTaGCTCTTGTCCAGACCACGTAGGAAACGATGGTGT +
Preference number: 4 (lower is better)
Translates to: WLLWRRWGQGVL*LLSRPRRKRWC
Trigger: ACACCATCGTTTCCTACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTCCCCACCTTCTCCAGAGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAAGGCCCCACTGGAAACTaGGCTCCGGGCCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQGPTGN*APGRLP
Trigger: GGGGAGCCGGCCCGGAGCGCAGTTTCCAGTGGGGCC...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp TCTTACCTCCTCCACCAGCTAGCCCCCAAGACAGCCTCTCCCAACCACCTTCCCCTTCAGTTCTTGCAGTaGACCCATCATGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SYLLHQLAPKTASPNHLPLQFLQ*THHAVH
Trigger: ATGAACTGCATGATGGGTGCACTGCAAGAACTGAAG...GGGAAGGTGGTTGGGAGAGGCTGTCTTGGGGGCTAGCTGGTGGAGGAGGTAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGGCCTGGCAGGACCTCTaGCACCCTCCCAACAAGGGT +
Preference number: 4 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMAWQDL*HPPNKG
Trigger: ACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGC...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCCACAGCGCCCAGCCTaGGGGGTGCTAAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: HMVSASTKGMGCPVSAELPQRPA*GVLRTV
Trigger: AACAGTTCTTAGCACCCCGCAGGCTGGGCGCTGTGG...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGGCAGTGGGAGGGTGTaGCCTCCTGGCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRGSGRV*PPGLVS
Trigger: GCTGACCAAGCCAGGAGGGCACACCCTCCCACTGCC...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGTCCCATCTTGAGCTCTaGCCCTCTCTCCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQSHLEL*PSLHSP
Trigger: GGGAGAGTGGAGAGAGGGGCAGAGCTCAAGATGGGA...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp GCTGAGCTTCTGCTGTATTCCAGGCAGTGCTTGGACCGTAGGTGCATTATGTCCGGTGGGGACAAGGTGTaGTCTTGCTCTTGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: AELLLYSRQCLDRRCIMSGGDKV*SCSCPD
Trigger: GTCTGGACAAGAGCAAGAGCACACCTTGTCCCCACC...GGACATAATGCACCTACGGTCCAAGCACTGCCTGGAATACAGCAGAAGCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGCAGAAGTGCCTTAACTaGACCGGATGGGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGQKCLN*TGWGRH
Trigger: GTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTG...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTAACAGACTGTGGGCCTaGCAGGACCTCTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: HMVSASTKGMGCPVSAELNRLWA*QDLCHP
Trigger: AGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTT...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp CAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAAATCTTAACTCGGTTCCACTCGCTCTaGCCCCTGCTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: QATCSSFHSDRGGSQILTRFHSL*PLLSTA
Trigger: AGCTGTGCTCAGCAGGGGCCAGAGCGAGTGGAACCG...AGTTAAGATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTGTGAGTGTTCCCTACTaGAGTGGGAGGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSVSVPY*SGRDSG
Trigger: GCCACTGTCCCTCCCACTCCAGTAGGGAACACTCAC...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGGAGGGTGTGCCCTCCTaGCTTGGTCAGCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQEGVPS*LGQPKR
Trigger: TCTTTTGGGCTGACCAAGCCAGGAGGGCACACCCTC...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCGGAAGGCACCTGAGGTaGGTTCTGGCTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLRGWVVQYLLSFCCIPGGRHLR*VLAAQE
Trigger: CTCTTGAGCAGCCAGAACCCACCTCAGGTGCCTTCC...GCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS-3UTR TCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCCAGAGAGGGCCCGGGTaGAACCCCGGCCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVQRGPG*NPGPTG
Trigger: TCCAGTGGGGCCGGGGTTTCACCCGGGCCCTCTCTG...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCCCACCAGAGTGGGCTTaGTCAGTTGGCAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLRGWVVQYLLSFCCIPGPPEWA*SVGKLQ
Trigger: CTGGAGTTTGCCAACTGAGCAAGCCCACTCTGGTGG...GCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCCAGAAGTGCCTTAACTaGACCGGATGGGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLRGWVVQYLLSFCCIPGQKCLN*TGWGRH
Trigger: GTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTG...GCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGTGTGCCCTCCTGGCTTaGTCAGCCCAAAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGCALLA*SAQKKI
Trigger: GATCTTCTTTTGGGCTGACCAAGCCAGGAGGGCACA...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCCTTCCACAGATACCTaGGCCAATCAGGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSPSTDT*ANQVAL
Trigger: AAGGGCCACCTGATTGGCCCAGGTATCTGTGGAAGG...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTTAACTGCACCGGATaGGGAAGGCACCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HMVSASTKGMGCPVSAELLNCTG*GRHLRW
Trigger: CCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAG...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTCCACTGCATCCATTTaGGAGCAGGAGTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCSTASI*EQELGP
Trigger: AGGACCCAACTCCTGCTCTCAAATGGATGCAGTGGA...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCTCAAGCTTCCACAGTaGCAGAGGGGGCTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSLKLPQ*QRGLSN
Trigger: ATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAG...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTCCCTCCCAACAAGGGTaGTCGCACTGGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QLRLYRAERADQRLLKTTPSQQG*SHWVLG
Trigger: TCCCAGGACCCAGTGCGAGCACCCTTGTTGGGAGGG...AGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CAGCCCATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTCCCTCCCAACAAGGGTaGTCGCACTGGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QPIWVASIQCTKTCHLLSPSQQG*SHWVLG
Trigger: TCCCAGGACCCAGTGCGAGCACCCTTGTTGGGAGGG...AGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGATGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTGGGGTTCAGTCCCTGTaGCTGGAGCAATGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RAERADQRLLKTTRTWHFGVQSL*LEQCLA
Trigger: GGCAAGACATTGCTCCAGGCACAGGGACTGAACCCC...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGGTTCTGCCTCCTGGCTaGAGTTGTTCCTGGACATGT +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQVLPPG*SCSWTC
Trigger: ACATGTCCAGGAACAACTGCAGCCAGGAGGCAGAAC...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGAGACCTAGGCTGTTCTaGCTCCTGGCTGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQRPRLF*LLAAVV
Trigger: AACAACTGCAGCCAGGAGGCAGAACAGCCTAGGTCT...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGTGGTGCTGGCAGAAGTaGCTTAACTGCACCGGATGG +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGWCWQK*LNCTGW
Trigger: CCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCA...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTAGTGCTGTCTGCACCTaGAGGAGCTTCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSSAVCT*RSFSSC
Trigger: GCAAGAACTGAAGCTCCTCCAGGTGCAGACAGCACT...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTAGTGCTGTCTGCACCTaGAGGAGCTTCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSSAVCT*RSFSSC
Trigger: GCAAGAACTGAAGCTCCTCCAGGTGCAGACAGCACT...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp AGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCTCGCACTGGGTCCTaGGACCTTCAGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPTLSPFTDEKHKVQRDQARTGS*DLQGCL
Trigger: CAGGCAGCCCTGAAGGTCCCAGGACCCAGTGCGAGC...TTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp TTCCCTGGCTGCTCCTTACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGCCCAGCACTGGGACCTaGCCCTTTCAGGCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FPGCSLHTVLLIQLIFSEPSTGT*PFQAQS
Trigger: TGACTGAGCCTGAAAGGGCCAGGTCCCAGTGCTGGG...CTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCCTTCTCCCCGCTTTCTaGGGGAAAGGAACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCLLPAF*GKGTWS
Trigger: ACTCCAAGTTCCTTTCCCCCAGAAAGCGGGGAGAAG...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGACAAAGGATTTGCAGTaGCTGGCTCCACCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQTKDLQ*LAPPEW
Trigger: CCACTCTGGTGGAGCCAGCCACTGCAAATCCTTTGT...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGAATGTTGGTATTCTCTaGGAAGACACAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRNVGIL*EDTKDL
Trigger: CAAATCCTTTGTGTCTTCCCAGAGAATACCAACATT...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GGCTATAGGGGACTCTGGCAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGTCTTTTCCCAGCCAGTaGGTGTTCCCTACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GYRGLWQLRLYRAERADQSFPSQ*VFPTGV
Trigger: CACTCCAGTAGGGAACACTCACTGGCTGGGAAAAGA...CTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGGATGGGGAAGGCACCTaGGGTGGGTTCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRDGEGT*GGFWLL
Trigger: GAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATC...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGGAGCTTCAGTTCTTaGAGTGCACCCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: LLRGWVVQYLLSFCCIPGRSFSS*SAPIMQ
Trigger: CTGCATGATGGGTGCACTGCAAGAACTGAAGCTCCT...GCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGCTTCTTAAAGATGTTTaGTGTCAGGGCGAACCTGCG +
Preference number: 4 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGLLKDV*CQGEPA
Trigger: CGCAGGTTCGCCCTGACAGCAAACATCTTTAAGAAG...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGTTTTGCCTCACTGCTaGTCCAGTCCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRVLPHC*SSPRRP
Trigger: AGGCCTCCTGGGACTGGAGCAGCAGTGAGGCAAAAC...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp AATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCCGGGTTTTGCCTCACTaGTGCTCCAGTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NLTAAPHYHLSQMRNTRFRVLPH*CSSPRR
Trigger: CCTCCTGGGACTGGAGCAGCAGTGAGGCAAAACCCG...GAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGACGCCTTCCTCCCTCCTaGAGCTCCCCCACCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRRLPPS*SSPTKN
Trigger: ATTTTTGGTGGGGGAGCTGCAGGAGGGAGGAAGGCG...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTAAGACACAAAGGATTTaGAGTGGCTGGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSKTQRI*SGWLHQ
Trigger: CTGGTGGAGCCAGCCACTGCAAATCCTTTGTGTCTT...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp AGAGGGAAAAGAGAGGTCCCAAGTCTGAAAGGTTGGGAAGAGAAAGGGAGGAGGCCTCCACATACACACTaGTTACCTCTCCCTACACCT +
Preference number: 4 (lower is better)
Translates to: RGKREVPSLKGWEEKGRRPPHTH*LPLPTP
Trigger: AGGTGTAGGGAGAGGTAAGCAGTGTGTATGTGGAGG...CCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCGCCTGGATCACTAGGTaGCCCTCCTGGGCCACGTGC +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVAWITR*PSWATC
Trigger: GCACGTGGCCCAGGAGGGCCACCTAGTGATCCAGGC...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGTGACTTGGGAAAGATaGAGGAGCCTCTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGVTWER*RSLSPT
Trigger: TGTTGGGGAGAGGCTCCTCCATCTTTCCCAAGTCAC...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCCTCATACCATGGTGCTaGCAGAAGTGCCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCLIPWC*QKCLNC
Trigger: GCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAG...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTCTAGTGCTCATACCATaGTGCTGGCAGAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSLVLIP*CWQKCL
Trigger: AAGGCACTTCTGCCAGCACCATGGTATGAGCACTAG...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCCTAGTGCTCATACCATaGTGCTGGCAGAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCLVLIP*CWQKCL
Trigger: AAGGCACTTCTGCCAGCACCATGGTATGAGCACTAG...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGACATCAGCTCCTGTTTaGGGCGACGGAGATAGCAGT +
Preference number: 4 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMTSAPV*GDGDSS
Trigger: ACTGCTATCTCCGTCGCCTCAAACAGGAGCTGATGT...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTATCATGCAGTTCATCTaGTCCTGTAAGCCATCACCC +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSIMQFI*SCKPSP
Trigger: GGGTGATGGCTTACAGGATCAGATGAACTGCATGAT...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp GGGGAAGGGAAAAGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACCCATAATCCCATCTTaGGCTCTGCCCCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGKSKSPSDSQHAIYDPPIIPS*ALPLSP
Trigger: TGGAGAGAGGGGCAGAGCTCAAGATGGGATTATGGG...TGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACTTTTCCCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCGTTCAGAGATCACCCTaGGGGGCGGGGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVVQRSP*GAGHKG
Trigger: TCCCTTGTGCCCCGCCCCTCAGGGTGATCTCTGAAC...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp AATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCCCCCGAGACCTCTCCTaGAGGTGGGCTTCACAGATT +
Preference number: 4 (lower is better)
Translates to: NLTAAPHYHLSQMRNTRFPRDLS*RWASQI
Trigger: AATCTGTGAAGCCCACCTTCAGGAGAGGTCTCGGGG...GAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGAGGAGCTTCAGTTCTTaGAGTGCACCCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGRSFSS*SAPIMQ
Trigger: CTGCATGATGGGTGCACTGCAAGAACTGAAGCTCCT...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGCCTAACCACCGCGGCTaGGCCCCCATAATCCCATCT +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRPNHRG*APIIPS
Trigger: AGATGGGATTATGGGGGCGCAGCCGCGGTGGTTAGG...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TTCCCTGGCTGCTCCTTACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGTGGTGCTGGCAGAAGTaGCTTAACTGCACCGGATGG +
Preference number: 4 (lower is better)
Translates to: FPGCSLHTVLLIQLIFSEWCWQK*LNCTGW
Trigger: CCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCA...CTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTCGACAGAAGAAGAGACCAACGCTCAGAGAAAGCACTTTTTCTTAAGCACTTTAGGGGGAACAGACTGTaGGCCTGGCAGGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: FDRRRDQRSEKALFLKHFRGNRL*AWQDLC
Trigger: GCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCT...AAAGTGCTTAAGAAAAAGTGCTTTCTCTGAGCGTTGGTCTCTTCTTCTGTCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGACTGAGCCAAGAACTCTaGCTTCTCCCCGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRLSQEL*LLPAFW
Trigger: CCAGAAAGCGGGGAGAAGCCAGAGTTCTTGGCTCAG...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGTTCAGTCCCTGTGCCTaGAGCAATGTCTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGFSPCA*SNVLPK
Trigger: CTTTGGCAAGACATTGCTCCAGGCACAGGGACTGAA...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGGCTGCAGTTGTTCCTaGACATGTAGCATATCTAGG +
Preference number: 4 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSGCSCS*TCSISR
Trigger: CCTAGATATGCTACATGTCCAGGAACAACTGCAGCC...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTGGTGCTAAGAACTGTTaGGGAGGAGTGTTGGTAACT +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSGAKNC*GGVLVT
Trigger: AGTTACCAACACTCCTCCCCAACAGTTCTTAGCACC...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ATACAGAATGTTCAACGGAGGTCTTTGGGGGCAGTGGAGATGTCAGAGGGATTTAGGGGTTGTGGGGTATaGGGCCCTACGAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: IQNVQRRSLGAVEMSEGFRGCGV*GPTNCF
Trigger: AAAACAGTTCGTAGGGCCCCATACCCCACAACCCCT...AAATCCCTCTGACATCTCCACTGCCCCCAAAGACCTCCGTTGAACATTCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGAGGGAAAAGAGAGGTCCCAAGTCTGAAAGGTTGGGAAGAGAAAGGGAGGAGGTTTGAGAGCAGGAGTTaGGTCCTTCTCATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RGKREVPSLKGWEEKGRRFESRS*VLLIAL
Trigger: CAGAGCAATGAGAAGGACCCAACTCCTGCTCTCAAA...CCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAACCTGGGCCAATCAGGTaGCCCTTGTACCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQPGPIR*PLYLPG
Trigger: CCCTGGCAGGTACAAGGGCCACCTGATTGGCCCAGG...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAGAGCAACCTTCTTTaGGGCAAGTTTGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSQSNLL*GKFGFR
Trigger: TCTGAACCCAAACTTGCCCCAAAGAAGGTTGCTCTG...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTCATACCATGGTGCTaGCAGAAGTGCCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYLIPWC*QKCLNC
Trigger: GCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAG...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCCTCTACTAAGGGGATaGGTTGTCCAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYPLLRG*VVQYLL
Trigger: CAGCAGATACTGGACAACCCATCCCCTTAGTAGAGG...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGCCTCTACTAAGGGGATaGGTTGTCCAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGPLLRG*VVQYLL
Trigger: CAGCAGATACTGGACAACCCATCCCCTTAGTAGAGG...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGATCGTACTAAGGGGATaGCTGCAGTTTGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQIVLRG*LQFELL
Trigger: AAGCAGCTCAAACTGCAGCCATCCCCTTAGTACGAT...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTCGACAGAAGAAGAGACCAACGCTCAGAGAAAGCACTTTTTCTTAAGCACTTTAAAGGCTCCGCTTCTTaGCCTTCTGTGAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: FDRRRDQRSEKALFLKHFKGSAS*PSVSGR
Trigger: CCGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTT...AAAGTGCTTAAGAAAAAGTGCTTTCTCTGAGCGTTGGTCTCTTCTTCTGTCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGATGAGACCATGGAGATaGAAAGGCATTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQMRPWR*KGIQTA
Trigger: GGCTGTTTGAATGCCTTTTCATCTCCATGGTCTCAT...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTCTTCTACCTCACTGGTaGATTGGCTGTTCTCTGACC +
Preference number: 4 (lower is better)
Translates to: RAERADQRLLKTTRTWHFLLPHW*IGCSLT
Trigger: GGTCAGAGAACAGCCAATTCACCAGTGAGGTAGAAG...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGATGTGCACATTACCTaGCAGACAGTGAGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGDVHIT*QTVSAQ
Trigger: TTGAGCACTCACTGTCTGTCAGGTAATGTGCACATC...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGAATTCCACTACTGTGTaGCCTTGGACAAGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGNSTTV*PWTSCL
Trigger: TAAGCAACTTGTCCAAGGTCACACAGTAGTGGAATT...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp CTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCACCTATTGTCTTCTCTaGCCCTTGCTACAATCCTGT +
Preference number: 4 (lower is better)
Translates to: LLRGWVVQYLLSFCCIPGTYCLL*PLLQSC
Trigger: ACAGGATTGTAGCAAGGGTCAGAGAAGACAATAGGT...GCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTTGCTCTCCATCGTCATaGGCCCATTTGTCGGGTTCG +
Preference number: 4 (lower is better)
Translates to: QLRLYRAERADQRLLKTTCSPSS*AHLSGS
Trigger: CGAACCCGACAAATGGGCGCATGACGATGGAGAGCA...AGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGCAGTGCACCCATCATaGAGTTCATCTGATCCTGTA +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGAVHPS*SSSDPV
Trigger: TACAGGATCAGATGAACTGCATGATGGGTGCACTGC...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGATGTTCCAGTGCTGTCTaGACCTGGAGGAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRCSSAV*TWRSFS
Trigger: ACTGAAGCTCCTCCAGGTGCAGACAGCACTGGAACA...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp AGAGGGAAAAGAGAGGTCCCAAGTCTGAAAGGTTGGGAAGAGAAAGGGAGGAGGGGTGGAATCTTAACATaGAGTTTCTTAGCACGCGCA +
Preference number: 4 (lower is better)
Translates to: RGKREVPSLKGWEEKGRRGGILT*SFLARA
Trigger: TGCGCGTGCTAAGAAACTGCATGTTAAGATTCCACC...CCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTGTGCTCATACCATGGTaGTGGCAGAAGTGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: RAERADQRLLKTTRTWHFVLIPW*WQKCLN
Trigger: GTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAAATCTTAACTGTGCTCATACCATGGTaGTGGCAGAAGTGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: QATCSSFHSDRGGSQILTVLIPW*WQKCLN
Trigger: GTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC...AGTTAAGATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTAGAGATCAAGCAACATaGTCAAGCTTCCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSRDQAT*SSFHSD
Trigger: GTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCT...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGAACAGACTGTGGGCCTaGCAGGACCTCTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLNRLWA*QDLCHP
Trigger: AGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTT...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGAAGCTGACAGAAGGTTaGGAGAGCCATAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMKLTEG*ESHRQV
Trigger: GACCTGTCTATGGCTCTCCCAACCTTCTGTCAGCTT...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGACCTCACTGGTGAATTaGCTGTTCTCTGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMTSLVN*LFSDPG
Trigger: ACCTGGGTCAGAGAACAGCCAATTCACCAGTGAGGT...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGCTCCATAGATGTGTCTaGAGAACAATGCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQLHRCV*RTMPSR
Trigger: CCTAGAAGGCATTGTTCTCCAGACACATCTATGGAG...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCCACAAAGAAGCAGGTaGAACCTTCCACAGATACCT +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYPQRSR*NLPQIP
Trigger: AGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGG...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCCACGTAGGAAACGATaGTGTGACTTGGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYPRRKR*CDLGKM
Trigger: CATCTTTCCCAAGTCACACCATCGTTTCCTACGTGG...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAACTTAACTGCACCGGATaGGGAAGGCACCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPTLSPFTDEKHKVQRDQLNCTG*GRHLRW
Trigger: CCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAG...TTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp GTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTGGCTATAGGGGACTCTaGCAACTAAGACTTTACAGA +
Preference number: 4 (lower is better)
Translates to: VQRDQATCSSFHSDRGGSGYRGL*QLRLYR
Trigger: TCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC...AGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
3UTR CAA 72 bp CTTGGCACTTTCAACTCTTTACCCCTTGCCAAGAATTaGAGGTCCTTAAGGGTTGACTGTGAGGGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: LGTFNSLPLAKN*RSLRVDCEGQL
Trigger: TAGCTGCCCCTCACAGTCAACCCTTAAGGACCTCAAATTCTTGGCAAGGGGTAAAGAGTTGAAAGTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp CAGCCCATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTACATCAGCTCCTGTTTaGGGCGACGGAGATAGCAGT +
Preference number: 4 (lower is better)
Translates to: QPIWVASIQCTKTCHLLSTSAPV*GDGDSS
Trigger: ACTGCTATCTCCGTCGCCTCAAACAGGAGCTGATGT...AGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGATGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTACCTATTGTCTTCTCTaGCCCTTGCTACAATCCTGT +
Preference number: 4 (lower is better)
Translates to: HMVSASTKGMGCPVSAELTYCLL*PLLQSC
Trigger: ACAGGATTGTAGCAAGGGTCAGAGAAGACAATAGGT...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAAACTTGGTGCTGCTaGCAAGAGAAGGTTGACTGG +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRETWCC*QEKVDW
Trigger: CCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTC...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTATGGAAACTTGGTGCTaGTGCCAAGAGAAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RAERADQRLLKTTRTWHFMETWC*CQEKVD
Trigger: GTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCAT...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TCTAAGTTTGAGAGATGTGCACATTACCTGACAGACAGTGAGTGCTCAACAAAATCAGCCAGGCTGGAGTaGAGTGGCATGATCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SKFERCAHYLTDSECSTKSARLE*SGMISP
Trigger: AGGCGAGATCATGCCACTGCACTCCAGCCTGGCTGA...TTTTGTTGAGCACTCACTGTCTGTCAGGTAATGTGCACATCTCTCAAACTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTAATCCTGCCTCTAATTaGAGCTGTCACACCCCATCA +
Preference number: 4 (lower is better)
Translates to: RAERADQRLLKTTRTWHFNPASN*SCHTPS
Trigger: TGATGGGGTGTGACAGCTGCAATTAGAGGCAGGATT...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTGAAAAGGATGTGGCTGTGTCCTaGGCAAGGGGGCTAAATCCC +
Preference number: 4 (lower is better)
Translates to: LLIWLWNRYGQLVGSSEKDVAVS*ARGLNP
Trigger: GGGATTTAGCCCCCTTGCCCAGGACACAGCCACATC...CTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCCCCGGGACATCAACGTaGAGGTCCAGTCATCCGGTT +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVPGTST*RSSHPV
Trigger: AACCGGATGACTGGACCTCCACGTTGATGTCCCGGG...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGTCCTTATCTGGAAAATaGGATCATGCCTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMSLSGK*DHACLP
Trigger: AGGCAGGCAGGCATGATCCCATTTTCCAGATAAGGA...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAAGGCTGTTCTGCCTCCTaGCTGCAGTTGTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQGCSAS*LQLFLD
Trigger: GTCCAGGAACAACTGCAGCCAGGAGGCAGAACAGCC...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGAAAGCACTTTTTCTTAAGCACTTTTGCCTTGGGTCACATGGTTAGTGCCTCTAGGATTTGCAGTGGCTaGCTCCACCAGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RKHFFLSTFALGHMVSASRICSG*LHQSGL
Trigger: AAGCCCACTCTGGTGGAGCCAGCCACTGCAAATCCT...AGAGGCACTAACCATGTGACCCAAGGCAAAAGTGCTTAAGAAAAAGTGCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGACTCATTCCAGACTTaGAGCTGGTGTCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGDSFQT*SWCHLE
Trigger: TTCAAGATGACACCAGCTCCAAGTCTGGAATGAGTC...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTTCTATAACAACACCTaGTGCTGGGAGGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCFYNNT*CWEVFI
Trigger: TATGAACACCTCCCAGCACCAGGTGTTGTTATAGAA...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGCCTATCTGGGGAACCTaGTGCTCCAGGGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLPIWGT*CSRALF
Trigger: GAAAAGAGCCCTGGAGCATCAGGTTCCCCAGATAGG...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGATCAGCATGCCATTTATaGTCCACGCAGGACCATGAA +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRSACHL*STQDHE
Trigger: TTCATGGTCCTGCGTGGATCATAAATGGCATGCTGA...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGCTCAAGCTTCCACAGTaGCAGAGGGGGCTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRLKLPQ*QRGLSN
Trigger: ATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAG...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp AATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCGGGATGGAAACTTGGTaGTGCTGCCAAGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: NLTAAPHYHLSQMRNTRFGMETW*CCQEKV
Trigger: AACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCC...GAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGTACAGCCTCTGTCATTaGCATGGCAGGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLYSLCH*HGRCPG
Trigger: CCCTGGACACCTGCCATGGCAATGACAGAGGCTGTA...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGCAACTCTTTACCCCTTaGCAAGAATTTGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGQLFTP*QEFEVL
Trigger: AAGGACCTCAAATTCTTGGCAAGGGGTAAAGAGTTG...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp CAGCCCATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTGGTCTTTGGGGGCAGTaGAGATGTCAGAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: QPIWVASIQCTKTCHLLSGLWGQ*RCQRDF
Trigger: AAAATCCCTCTGACATCTCCACTGCCCCCAAAGACC...AGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGATGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAATGTCTAGGGCTTCCCTaGCTGCTCCTTACACACTGT +
Preference number: 4 (lower is better)
Translates to: SPTLSPFTDEKHKVQRDQCLGLP*LLLTHC
Trigger: ACAGTGTGTAAGGAGCAGCCAGGGAAGCCCTAGACA...TTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATGCTTGTTTCCTTATCTaGAAAATGGGATCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYACFLI*KMGSCL
Trigger: CAGGCATGATCCCATTTTCCAGATAAGGAAACAAGC...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAAAGCCTCCCAAGTAGCTaGGTTTACAGGCGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQSLPSS*VYRRVP
Trigger: TGGCACACGCCTGTAAACCCAGCTACTTGGGAGGCT...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTGAAAAGCTGGCTCCACCAGAGTaGGCTTGCTCAGTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LLIWLWNRYGQLVGSSEKLAPPE*ACSVGK
Trigger: TTTGCCAACTGAGCAAGCCCACTCTGGTGGAGCCAG...CTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTAACAACACCTGGTGCTaGGAGGTGTTCATAAAGTTC +
Preference number: 4 (lower is better)
Translates to: RAERADQRLLKTTRTWHFNNTWC*EVFIKF
Trigger: GAACTTTATGAACACCTCCCAGCACCAGGTGTTGTT...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGCTTTGGAACAGATATaGACAATTAGTGGGATCGTC +
Preference number: 4 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGALEQI*TISGIV
Trigger: GACGATCCCACTAATTGTCCATATCTGTTCCAAAGC...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTCTAGGGTGTAGGGAGTaGGAATGTTTCCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QLRLYRAERADQRLLKTTLGCRE*ECFLEQ
Trigger: CTGCTCTAGGAAACATTCCCACTCCCTACACCCTAG...AGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTAAAACCACTAGGACTTaGCACTTTCAACTCTTTACC +
Preference number: 4 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSKTTRT*HFQLFT
Trigger: GGTAAAGAGTTGAAAGTGCCAAGTCCTAGTGGTTTT...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp AATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCATCATGCAGTTCATCTaGTCCTGTAAGCCATCACCC +
Preference number: 4 (lower is better)
Translates to: NLTAAPHYHLSQMRNTRFIMQFI*SCKPSP
Trigger: GGGTGATGGCTTACAGGATCAGATGAACTGCATGAT...GAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTATCCGAACCACTGTaGCCAGTCCACGAAACACGT +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRLSEPL*PVHETR
Trigger: ACGTGTTTCGTGGACTGGTCACAGTGGTTCGGATAA...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp CAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTTTGTCCAGTATCTGCTaGGCTTCTGCTGTATTCCAG +
Preference number: 4 (lower is better)
Translates to: QLRLYRAERADQRLLKTTLSSIC*ASAVFQ
Trigger: CTGGAATACAGCAGAAGCTCAGCAGATACTGGACAA...AGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAATGCTCAAGAGAAGGTTaGCTGGAGGGGGAACAGACT +
Preference number: 4 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQCSREG*LEGEQT
Trigger: AGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGAGCA...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS-3UTR GCA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAATGTTCCAGTGCTGTCTaGACCTGGAGGAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQCSSAV*TWRSFS
Trigger: ACTGAAGCTCCTCCAGGTGCAGACAGCACTGGAACA...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAAGAGATCAAGCAACATaGTCAAGCTTCCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRRDQAT*SSFHSD
Trigger: GTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCT...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAAATCTTAACTCAACTCTTTACCCCTTaGCAAGAATTTGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: QATCSSFHSDRGGSQILTQLFTP*QEFEVL
Trigger: AAGGACCTCAAATTCTTGGCAAGGGGTAAAGAGTTG...AGTTAAGATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGCAAGAGAAGGTTGACTaGAGGGGGAACAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLQEKVD*RGNRLW
Trigger: CCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTG...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp TTCGACAGAAGAAGAGACCAACGCTCAGAGAAAGCACTTTTTCTTAAGCACTTTGACACTCCTATGGGATaGAAACTTGGTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FDRRRDQRSEKALFLKHFDTPMG*KLGAAA
Trigger: GGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTC...AAAGTGCTTAAGAAAAAGTGCTTTCTCTGAGCGTTGGTCTCTTCTTCTGTCGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCTGGGGGAAAGGAACTTaGAGTTGGGCTTTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVWGKGT*SWAFES
Trigger: GCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCA...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTAGTGGCTATTTCTTCTaGGTTCACTTCTACCTCACT +
Preference number: 4 (lower is better)
Translates to: RAERADQRLLKTTRTWHFSGYFF*VHFYLT
Trigger: AGTGAGGTAGAAGTGAACCCAGAAGAAATAGCCACT...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATATCTTACCATTTGACTaGGTAGGATTTGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYILPFD*VGFESD
Trigger: GTCACTCTCAAATCCTACCCAGTCAAATGGTAAGAT...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTTCTGTTCCCTGGGCCACAAAGAAGCAGGTGGAACCTTCCACAGATACCTGGGCTCTTGATTTGGCTTTaGAACAGATATGGACAATTA +
Preference number: 4 (lower is better)
Translates to: FLFPGPQRSRWNLPQIPGLLIWL*NRYGQL
Trigger: TAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG...CCCAGGTATCTGTGGAAGGTTCCACCTGCTTCTTTGTGGCCCAGGGAACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGTTGTTCCTCTTGATTTaGCTTTGGAACAGATATGGA +
Preference number: 4 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQLFLLI*LWNRYG
Trigger: TCCATATCTGTTCCAAAGCCAAATCAAGAGGAACAA...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGAACGATGGTGTGACTTaGGAAAGATGGAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRNDGVT*ERWRSL
Trigger: GAGGCTCCTCCATCTTTCCCAAGTCACACCATCGTT...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTCCCTGGCTGCTCCTTACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGGGCTATAGGGGACTCTaGCAACTAAGACTTTACAGA +
Preference number: 4 (lower is better)
Translates to: FPGCSLHTVLLIQLIFSEGYRGL*QLRLYR
Trigger: TCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC...CTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCAGTCCAGGTATGGACTaGAACCTCCAAGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVSPGMD*NLQGRK
Trigger: CTTTCTGCCTTGGAGGTTTCAGTCCATACCTGGACT...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTCCCTGGCTGCTCCTTACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGTCGCTCACTTTCAAATaGGACCATGGAGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: FPGCSLHTVLLIQLIFSESLTFK*DHGDEK
Trigger: CTTTTCATCTCCATGGTCTCATTTGAAAGTGAGCGA...CTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp AGAAAGCACTTTTTCTTAAGCACTTTTGCCTTGGGTCACATGGTTAGTGCCTCTGACTTCCTCCGCTCATaGTTCAGTAGGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: RKHFFLSTFALGHMVSASDFLRS*FSRWNL
Trigger: AAGATTCCACCTACTGAATCATGAGCGGAGGAAGTC...AGAGGCACTAACCATGTGACCCAAGGCAAAAGTGCTTAAGAAAAAGTGCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp AATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGTCCACGAAACACGTaGGTTATAGGTGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: NLTAAPHYHLSQMRNTRFSPRNT*VIGECP
Trigger: TGGACATTCACCTATAACTCACGTGTTTCGTGGACT...GAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp TTCCCTGGCTGCTCCTTACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGTCTCTGATTTCTCTCTaGTTACGTCTGCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: FPGCSLHTVLLIQLIFSESLISL*LRLLSP
Trigger: AGGAGATAGCAGACGTAAGCAGAGAGAAATCAGAGA...CTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGAGACAGGTCTTTATTTaGGGGCCTATCTGGGGAACC +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLRQVFI*GPIWGT
Trigger: GGTTCCCCAGATAGGCCCCCAAATAAAGACCTGTCT...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp CAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTGTCCAAGAAGTACCTTaGTTTCCCACAGACTCATTC +
Preference number: 4 (lower is better)
Translates to: QLRLYRAERADQRLLKTTVQEVP*FPTDSF
Trigger: GAATGAGTCTGTGGGAAACCAAGGTACTTCTTGGAC...AGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTCGACAGAAGAAGAGACCAACGCTCAGAGAAAGCACTTTTTCTTAAGCACTTTCTAGGGTGTAGGGAGTaGGAATGTTTCCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FDRRRDQRSEKALFLKHFLGCRE*ECFLEQ
Trigger: CTGCTCTAGGAAACATTCCCACTCCCTACACCCTAG...AAAGTGCTTAAGAAAAAGTGCTTTCTCTGAGCGTTGGTCTCTTCTTCTGTCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGCCCATCAGGAGGGAATaGATTTTAGGAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLPIRRE*ILGGQP
Trigger: TGGCTGTCCTCCTAAAATCCATTCCCTCCTGATGGG...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCTCCCCTAGGCCTTTCTaGTTCAGTCACCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVSPRPF*FSHPFS
Trigger: AGAGAAAGGGTGACTGAACCAGAAAGGCCTAGGGGA...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp ATGGTTCAAAGTCTGCTTATTTTCCACTGCATCCATTaGAGAGCAGGAGTTGGGTCCTTCTCATTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: MVQSLLIFHCIH*RAGVGSFSLLC
Trigger: ACAGAGCAATGAGAAGGACCCAACTCCTGCTCTCAAATGGATGCAGTGGAAAATAAGCAGACTTTGAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp TTCGACAGAAGAAGAGACCAACGCTCAGAGAAAGCACTTTTTCTTAAGCACTTTTGGCTATTAATGCTTTaGGGGTGGGAAGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: FDRRRDQRSEKALFLKHFWLLML*GWEGIL
Trigger: CAGGATTCCTTCCCACCCTCAAAGCATTAATAGCCA...AAAGTGCTTAAGAAAAAGTGCTTTCTCTGAGCGTTGGTCTCTTCTTCTGTCGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp CAGCCCATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCCCTCACTCAAAACTaGAATGTTGGTATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPIWVASIQCTKTCHLLSSLTQN*NVGILW
Trigger: CCAGAGAATACCAACATTTCAGTTTTGAGTGAGGGA...AGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGATGGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGTTGTCCAGTATCTGCTaGGCTTCTGCTGTATTCCAG +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLLSSIC*ASAVFQ
Trigger: CTGGAATACAGCAGAAGCTCAGCAGATACTGGACAA...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp CTCTTGATTTGGCTTTGGAACAGATATGGACAATTAGTGGGATCGTCTGAAAAGCTCTCTGCTTACGTCTaGTATCTCCTCCACATACAC +
Preference number: 4 (lower is better)
Translates to: LLIWLWNRYGQLVGSSEKLSAYV*YLLHIH
Trigger: GTGTATGTGGAGGAGATAGCAGACGTAAGCAGAGAG...CTTTTCAGACGATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCTATGGGATGGAAACTTaGTGCTGCTGCCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVYGMET*CCCQEK
Trigger: CTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATA...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp CCACGCAGGACCATGAATAATATGAGAGGACAGATTTaGCTCTTGTTCCTCTTGATTTGGCTTTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: PRRTMNNMRGQI*LLFLLIWLWNR
Trigger: TCTGTTCCAAAGCCAAATCAAGAGGAACAAGAGCAAAATCTGTCCTCTCATATTATTCATGGTCCTGCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp AGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAACACGTGAGTTATAGGTaGATGTCCAAGAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: SPTLSPFTDEKHKVQRDQHVSYR*MSKKYL
Trigger: AAGGTACTTCTTGGACATTCACCTATAACTCACGTG...TTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCCTCCCAAGTCTCTTCTaGCTAACCAATGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVLPSLF*LTNGSK
Trigger: CTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAG...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGCTTCAGTTCTTGCAGTaGACCCATCATGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLLQFLQ*THHAVH
Trigger: ATGAACTGCATGATGGGTGCACTGCAAGAACTGAAG...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR GCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGCTGACAGACAGTGAGTaGTCAACAAAACCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRLTDSE*STKPKK
Trigger: CTTTTTGGGTTTTGTTGAGCACTCACTGTCTGTCAG...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp GGGGAAGGGAAAAGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCATTGGGTCCTTCTCATTaGTCTGTTCTTAGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: GEGKSKSPSDSQHAIYDPLGPSH*SVLSFY
Trigger: ATAGAAACTAAGAACAGAGCAATGAGAAGGACCCAA...TGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACTTTTCCCTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR TCA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGTGCTCTTGTTCCTCTTaGTTTGGCTTTGGAACAGAT +
Preference number: 4 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLCSCSS*FGFGTD
Trigger: ATCTGTTCCAAAGCCAAATCAAGAGGAACAAGAGCA...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR GCA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAACTGCTTATTTTCCACTaGATCCATTTGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQLLIFH*IHLRAG
Trigger: TCCTGCTCTCAAATGGATGCAGTGGAAAATAAGCAG...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CCA 90 bp TTAAATCTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGAAAACCACTAGGACTTaGCACTTTCAACTCTTTACC +
Preference number: 4 (lower is better)
Translates to: LNLTAAPHYHLSQMRNTRKTTRT*HFQLFT
Trigger: GGTAAAGAGTTGAAAGTGCCAAGTCCTAGTGGTTTT...CCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAGATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR TCA 90 bp TTCGACAGAAGAAGAGACCAACGCTCAGAGAAAGCACTTTTTCTTAAGCACTTTAGGGAGGATATTAAATaGGCTTCTAGCTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: FDRRRDQRSEKALFLKHFREDIK*ASSSFA
Trigger: TGCAAATGAGCTAGAAGCTCATTTAATATCCTCCCT...AAAGTGCTTAAGAAAAAGTGCTTTCTCTGAGCGTTGGTCTCTTCTTCTGTCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
3UTR CAA 72 bp AGGACCATGAATAATATGAGAGGACAGATTTTGCTCTaGTTCCTCTTGATTTGGCTTTGGAACAGATATGGA +
Preference number: 4 (lower is better)
Translates to: RTMNNMRGQILL*FLLIWLWNRYG
Trigger: TCCATATCTGTTCCAAAGCCAAATCAAGAGGAACAAGAGCAAAATCTGTCCTCTCATATTATTCATGGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS TCA 90 bp CATGCGCCCATTTGTCGGGTTCGGTTCAAACAGAGAGGGCCCGGGTaGAACCCCGGCCCCACTGGAAACTGCGCTCCGGGCCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: HAPICRVRFKQRGPG*NPGPTGNCAPGRLP
Trigger: GGGGAGCCGGCCCGGAGCGCAGTTTCCAGTGGGGCCGGGGTTTCACCCGGGCCCTCTCTGTTTGAACCGAACCCGACAAATGGGCGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000527570.1
ENST00000534365.1
CDS CCA 90 bp CAGGACCTCTGCCACCCTCCCAACAAGGGTGCTCGCACTGGGTCCTaGGACCTTCAGGGCTGCCTGGCACAGGACCCCCTCCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: QDLCHPPNKGARTGS*DLQGCLAQDPLQRS
Trigger: AGATCTCTGGAGGGGGTCCTGTGCCAGGCAGCCCTGAAGGTCCCAGGACCCAGTGCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS GCA 90 bp CCTCCCAACAAGGGTGCTCGCACTGGGTCCTGGGACCTTCAGGGCTaGCTGGCACAGGACCCCCTCCAGAGATCTCCAGCTGTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: PPNKGARTGSWDLQG*LAQDPLQRSPAVPV
Trigger: CACTGGAACAGCTGGAGATCTCTGGAGGGGGTCCTGTGCCAGGCAGCCCTGAAGGTCCCAGGACCCAGTGCGAGCACCCTTGTTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS GCA 90 bp AAGGTTGACTGGAGGGGGAACAGACTGTGGGCCTGGCAGGACCTCTaGCACCCTCCCAACAAGGGTGCTCGCACTGGGTCCTGGGACCTT +
Preference number: 5 (lower is better)
Translates to: KVDWRGNRLWAWQDL*HPPNKGARTGSWDL
Trigger: AAGGTCCCAGGACCCAGTGCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS CCA 90 bp CCAACAAGGGTGCTCGCACTGGGTCCTGGGACCTTCAGGGCTGCCTaGCACAGGACCCCCTCCAGAGATCTCCAGCTGTTCCAGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PTRVLALGPGTFRAA*HRTPSRDLQLFQCC
Trigger: ACAGCACTGGAACAGCTGGAGATCTCTGGAGGGGGTCCTGTGCCAGGCAGCCCTGAAGGTCCCAGGACCCAGTGCGAGCACCCTTGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS CCA 90 bp TGCTGCCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTGGGCCTaGCAGGACCTCTGCCACCCTCCCAACAAGGGTGCTCGCACTGGG +
Preference number: 5 (lower is better)
Translates to: CCQEKVDWRGNRLWA*QDLCHPPNKGARTG
Trigger: CCCAGTGCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS CCA 90 bp TGGTGCTGCTGCCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTaGGCCTGGCAGGACCTCTGCCACCCTCCCAACAAGGGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: WCCCQEKVDWRGNRL*AWQDLCHPPNKGAR
Trigger: GCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS CCA 90 bp GCTGCTCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTGGGCCTaGCAGGACCTCTGCCACCCTCCCAACAAGGGTGCTCGCACTGGG +
Preference number: 5 (lower is better)
Translates to: AAQEKVDWRGNRLWA*QDLCHPPNKGARTG
Trigger: CCCAGTGCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS CCA 90 bp GTTCTGGCTGCTCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTaGGCCTGGCAGGACCTCTGCCACCCTCCCAACAAGGGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: VLAAQEKVDWRGNRL*AWQDLCHPPNKGAR
Trigger: GCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGAGCAGCCAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS TCA 90 bp GAAATGTCCAGAGCCCTTGGAAAGGCTCCGCTTCTTGACCTTCTGTaGGCGGCCGGTTCGGGACTCAGGGACCATGGGTGTCACCCAGCC +
Preference number: 5 (lower is better)
Translates to: EMSRALGKAPLLDLL*AAGSGLRDHGCHPA
Trigger: GGCTGGGTGACACCCATGGTCCCTGAGTCCCGAACCGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTTCCAAGGGCTCTGGACATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS TCA 90 bp CTGGGAAGGGGAAATGTCCAGAGCCCTTGGAAAGGCTCCGCTTCTTaGCCTTCTGTGAGCGGCCGGTTCGGGACTCAGGGACCATGGGTG +
Preference number: 5 (lower is better)
Translates to: LGRGNVQSPWKGSAS*PSVSGRFGTQGPWV
Trigger: CACCCATGGTCCCTGAGTCCCGAACCGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTTCCAAGGGCTCTGGACATTTCCCCTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS CCA 90 bp CCGGGACATCAACGTGGAGGTCCAGTCATCCGGTTCCACTCGCTCTaGCCCCTGCTGAGCACAGCTTTGATGTGGCTGTGTCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: PGHQRGGPVIRFHSL*PLLSTALMWLCPGQ
Trigger: TTGCCCAGGACACAGCCACATCAAAGCTGTGCTCAGCAGGGGCCAGAGCGAGTGGAACCGGATGACTGGACCTCCACGTTGATGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS-3UTR CAA 90 bp GGGAAAGGAACTTGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCCCAATCAGGTGGCCCTaGTACCTGCCAGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GKGTWSWAFESHTAHPPSPIRWP*YLPGKW
Trigger: CCACTTCCCTGGCAGGTACAAGGGCCACCTGATTGG...GGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS GCA 90 bp GTCACGGTCAGGCCGCACACTACGCAAGAACTTCTTAAAGATGTTTaGTGTCAGGGCGAACCTGCGGCCCAGCTCCTGGGGCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: VTVRPHTTQELLKDV*CQGEPAAQLLGLAF
Trigger: AAAGGCCAGCCCCAGGAGCTGGGCCGCAGGTTCGCCCTGACAGCAAACATCTTTAAGAAGTTCTTGCGTAGTGTGCGGCCTGACCGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS CCA 90 bp CTCGCTCTGGCCCCTGCTGAGCACAGCTTTGATGTGGCTGTGTCCTaGGCAAGGGGGCTAAATCCCTTCCACAGACACTCCTATGGGATG +
Preference number: 5 (lower is better)
Translates to: LALAPAEHSFDVAVS*ARGLNPFHRHSYGM
Trigger: CATCCCATAGGAGTGTCTGTGGAAGGGATTTAGCCCCCTTGCCCAGGACACAGCCACATCAAAGCTGTGCTCAGCAGGGGCCAGAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS-3UTR CAA 90 bp TGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCTGGAGAAGGTGGGGACAAGGTTAGGCCCTAGGCATTaGCATTCACCTCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: WGRHLRWVLAALEKVGTRLGPRH*HSPLPS
Trigger: GGAGGGAAGAGGTGAATGCAAATGCCTAGGGCCTAA...CCTTGTCCCCACCTTCTCCAGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GGGAAAGGAACTTGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCGGACAAGGTGTGCTCTaGCTCTTGTCCAGACCACGT +
Preference number: 5 (lower is better)
Translates to: GKGTWSWAFESHTAHPPSGQGVL*LLSRPR
Trigger: ACGTGGTCTGGACAAGAGCAAGAGCACACCTTGTCC...GGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS TCA 90 bp ACACTCCTATGGGATGGAAACTTGGTGCTGCTGCCAAGAGAAGGTTaGCTGGAGGGGGAACAGACTGTGGGCCTGGCAGGACCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: TLLWDGNLVLLPREG*LEGEQTVGLAGPLP
Trigger: TGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS CCA 90 bp TGCTGTTCTACAGCCTCTGCTGGTGACACCCAGGCAAACAGGGTCTaGAGTGGACCTCCAGCAAACTCCAGCAGACCCAGTTGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: CCSTASAGDTQANRV*SGPPANSSRPSCGG
Trigger: ACCACCACAACTGGGTCTGCTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTGTCACCAGCAGAGGCTGTAGAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527570.1
CDS GCA 90 bp CCAAGTCTAGTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTaGACCGGATGGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: PSLVLIPWCWQKCLN*TGWGRHLRWVLAAQ
Trigger: TTGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCACTAGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS CCA 90 bp GGACCCCCTCCAGAGATCTCCAGCTGTTCCAGTGCTGTCTGCACCTaGAGGAGCTTCAGTTCTTGCAGTGCACCCATCATGCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: GPPPEISSCSSAVCT*RSFSSCSAPIMQFI
Trigger: GATGAACTGCATGATGGGTGCACTGCAAGAACTGAAGCTCCTCCAGGTGCAGACAGCACTGGAACAGCTGGAGATCTCTGGAGGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS CCA 90 bp GTGCTCATACCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATaGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCAAGAGAAGGTT +
Preference number: 5 (lower is better)
Translates to: VLIPWCWQKCLNCTG*GRHLRWVLAAQEKV
Trigger: AACCTTCTCTTGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGGTATGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS GCA 90 bp AATCCCTTCCACAGACACTCCTATGGGATGGAAACTTGGTGCTGCTaGCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: NPFHRHSYGMETWCC*QEKVDWRGNRLWAW
Trigger: CCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGGAAGGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS-3UTR CAA 90 bp AGAGGGAAAAGAGAGGTCCCAAGTCTGAAAGGTTGGGAAGAGAAAGGGAGGAGGGAAAGGCTCCGCTTCTaGACCTTCTGTGAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: RGKREVPSLKGWEEKGRRERLRF*TFCERP
Trigger: CGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTTC...CCTCCTCCCTTTCTCTTCCCAACCTTTCAGACTTGGGACCTCTCTTTTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS GCA 90 bp CTAAATCCCTTCCACAGACACTCCTATGGGATGGAAACTTGGTGCTaGTGCCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LNPFHRHSYGMETWC*CQEKVDWRGNRLWA
Trigger: GGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGGAAGGGATTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS GCA 90 bp GGGCTAAATCCCTTCCACAGACACTCCTATGGGATGGAAACTTGGTaGTGCTGCCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: GLNPFHRHSYGMETW*CCQEKVDWRGNRLW
Trigger: CCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGGAAGGGATTTAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS GCA 90 bp TCCTCTGGGATGAAGCTTCCAGAGGAAGGAGCAGGTAGCAATCTTTaGTGTTCTACAGCCTCTGCTGGTGACACCCAGGCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: SSGMKLPEEGAGSNL*CSTASAGDTQANRV
Trigger: GACCCTGTTTGCCTGGGTGTCACCAGCAGAGGCTGTAGAACAGCAAAGATTGCTACCTGCTCCTTCCTCTGGAAGCTTCATCCCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527570.1
CDS CCA 90 bp AGGGGGCTAAATCCCTTCCACAGACACTCCTATGGGATGGAAACTTaGTGCTGCTGCCAAGAGAAGGTTGACTGGAGGGGGAACAGACTG +
Preference number: 5 (lower is better)
Translates to: RGLNPFHRHSYGMET*CCCQEKVDWRGNRL
Trigger: CAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGGAAGGGATTTAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS-3UTR CAA 90 bp GGGAAAGGAACTTGGAGTTGGGCTTTCGAGAGCCATACCGCCCACCCTCCCTCCTGTCCAAGAAGTACCTaGGTTTCCCACAGACTCATT +
Preference number: 5 (lower is better)
Translates to: GKGTWSWAFESHTAHPPSCPRST*VSHRLI
Trigger: AATGAGTCTGTGGGAAACCAAGGTACTTCTTGGACA...GGAGGGAGGGTGGGCGGTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS CCA 90 bp TCATGCAGTTCATCTGATCCTGTAAGCCATCACCCACCTCCTTCATaGACATCTGCAGGGGAGAGAGAAAGCATGGGGCCAGCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SCSSSDPVSHHPPPS*TSAGERESMGPAPV
Trigger: AACAGGAGCTGGCCCCATGCTTTCTCTCTCCCCTGCAGATGTCCATGAAGGAGGTGGGTGATGGCTTACAGGATCAGATGAACTGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527621.1
CDS-3UTR CAA 90 bp CACAAGGTTCAGAGAGATCAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGTTCAACGGAGGTCTTaGGGGGCAGTGGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: HKVQRDQATCSSFHSDRGVQRRS*GAVEMS
Trigger: TGACATCTCCACTGCCCCCAAAGACCTCCGTTGAAC...CCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTGATCTCTCTGAACCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GGCTATAGGGGACTCTGGCAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGGTGTGCCCTCCTGGCTaGGTCAGCCCAAAAGAAGAT +
Preference number: 5 (lower is better)
Translates to: GYRGLWQLRLYRAERADQVCPPG*VSPKED
Trigger: ATCTTCTTTTGGGCTGACCAAGCCAGGAGGGCACAC...CTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGGAAGACACAAAGGATTaGCAGTGGCTGGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQEDTKD*QWLAPP
Trigger: TGGTGGAGCCAGCCACTGCAAATCCTTTGTGTCTTC...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp TGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTTCCACTGCATCCATTaGAGAGCAGGAGTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: WLVPLLRGWVVQYLLSFCFHCIH*RAGVGS
Trigger: GGACCCAACTCCTGCTCTCAAATGGATGCAGTGGAA...GCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATTCGTCATGCGCCCATTaGTCGGGTTCGGTTCAAACA +
Preference number: 5 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYSSCAH*SGSVQT
Trigger: TGTTTGAACCGAACCCGACAAATGGGCGCATGACGA...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp TTGCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATAAATGTCCAGAGCCCTaGGAAAGGCTCCGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LPWVTWLVPLLRGWVVQYKCPEP*ERLRFL
Trigger: CAAGAAGCGGAGCCTTTCCAAGGGCTCTGGACATTT...ATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTACAGAGCAACCTTCTTaGGGGCAAGTTTGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSTEQPS*GQVWVQ
Trigger: CTGAACCCAAACTTGCCCCAAAGAAGGTTGCTCTGT...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp AGAGCAGAAAGAGCAGACCAGAGGCTTCTCAAAACCACTAGGACTTGGCACTTTAGGTCTGCAAAAACGTaGTCCCCTAACACCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RAERADQRLLKTTRTWHFRSAKT*SPNTRG
Trigger: GCCTCTGGTGTTAGGGGACAACGTTTTTGCAGACCT...AAAGTGCCAAGTCCTAGTGGTTTTGAGAAGCCTCTGGTCTGCTCTTTCTGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GGGGAAGGGAAAAGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACTGGGGGAAAGGAACTaGGAGTTGGGCTTTCGAGAG +
Preference number: 5 (lower is better)
Translates to: GEGKSKSPSDSQHAIYDPLGERN*ELGFRE
Trigger: CTCTCGAAAGCCCAACTCCAAGTTCCTTTCCCCCAG...TGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACTTTTCCCTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp CAGCCCATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTGTTGGGGAGGAGTGTaGGTAACTCCAGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QPIWVASIQCTKTCHLLSCWGGV*VTPGSS
Trigger: GCTGGACCCTGGAGTTACCAACACTCCTCCCCAACA...AGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGATGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTAAACGATGGTGTGACTaGGGAAAGATGGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: HMVSASTKGMGCPVSAELKRWCD*GKMEEP
Trigger: AGGCTCCTCCATCTTTCCCAAGTCACACCATCGTTT...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp CACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCCCCTTGCCAAGAATTaGAGGTCCTTAAGGGTTGAC +
Preference number: 5 (lower is better)
Translates to: HMVSASTKGMGCPVSAELPLAKN*RSLRVD
Trigger: GTCAACCCTTAAGGACCTCAAATTCTTGGCAAGGGG...AAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGGCAAGTCTAGCCAATaGCCCACCAGGTCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRGKSSQ*PTRSAK
Trigger: TTTTGCAGACCTGGTGGGCAATTGGCTAGACTTGCC...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTTTGTTCTGGCCCAAGTaGAAACAAGTTTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSLFWPK*KQVFSL
Trigger: GAGACTGAAAACTTGTTTCAACTTGGGCCAGAACAA...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGATTCTTTGGGGCAAGTTaGGGTTCAGAGATCACCCTG +
Preference number: 5 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRFFGAS*GSEITL
Trigger: CAGGGTGATCTCTGAACCCAAACTTGCCCCAAAGAA...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp CAAGCAACATGCTCAAGCTTCCACAGTGACAGAGGGGGCTCTCAAATCTTAACTTTAAGCACTTTTGCCTaGGGTCACATGGTTAGTGCC +
Preference number: 5 (lower is better)
Translates to: QATCSSFHSDRGGSQILTLSTFA*GHMVSA
Trigger: GGCACTAACCATGTGACCCAAGGCAAAAGTGCTTAA...AGTTAAGATTTGAGAGCCCCCTCTGTCACTGTGGAAGCTTGAGCATGTTGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp ACTAAGGGGATGGGTTGTCCAGTATCTGCTGAGCTTCTGCTGTATTCCAGGCAGAAAACATGTCACCTATaGTCTTCTCTGACCCTTGCT +
Preference number: 5 (lower is better)
Translates to: TKGMGCPVSAELLLYSRQKTCHL*SSLTLA
Trigger: AGCAAGGGTCAGAGAAGACAATAGGTGACATGTTTT...CTGCCTGGAATACAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp CTCACAGCAGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGACCCCTTGCCAAGAATTaGAGGTCCTTAAGGGTTGAC +
Preference number: 5 (lower is better)
Translates to: LTAAPHYHLSQMRNTRFRPLAKN*RSLRVD
Trigger: GTCAACCCTTAAGGACCTCAAATTCTTGGCAAGGGG...TCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCTGCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp TTCCCTGGCTGCTCCTTACACACTGTACTCCTTATTCAGCTCATTTTCTCAGAGCTGGCTATTAATGCTTaGAGGGTGGGAAGGAATCCT +
Preference number: 5 (lower is better)
Translates to: FPGCSLHTVLLIQLIFSELAINA*RVGRNP
Trigger: AGGATTCCTTCCCACCCTCAAAGCATTAATAGCCAG...CTCTGAGAAAATGAGCTGAATAAGGAGTACAGTGTGTAAGGAGCAGCCAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTCCTCTTGATTTGGCTTaGGAACAGATATGGACAATT +
Preference number: 5 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSPLDLA*EQIWTI
Trigger: AATTGTCCATATCTGTTCCAAAGCCAAATCAAGAGG...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GGCTATAGGGGACTCTGGCAACTAAGACTTTACAGAGCAGAAAGAGCAGACCAGAGTGCATGTCATCCTTaGGGGAACAGTGTAAATTTG +
Preference number: 5 (lower is better)
Translates to: GYRGLWQLRLYRAERADQSACHP*GNSVNL
Trigger: CAAATTTACACTGTTCCCCAAAGGATGACATGCACT...CTGGTCTGCTCTTTCTGCTCTGTAAAGTCTTAGTTGCCAGAGTCCCCTATAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp TTCGACAGAAGAAGAGACCAACGCTCAGAGAAAGCACTTTTTCTTAAGCACTTTCTGCTCAAGAGAAGGTaGACTGGAGGGGGAACAGAC +
Preference number: 5 (lower is better)
Translates to: FDRRRDQRSEKALFLKHFLLKRR*TGGGTD
Trigger: GTCTGTTCCCCCTCCAGTCAACCTTCTCTTGAGCAG...AAAGTGCTTAAGAAAAAGTGCTTTCTCTGAGCGTTGGTCTCTTCTTCTGTCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS-3UTR CAA 90 bp CCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAGCAATCGTCATGCGCCCATTaGTCGGGTTCGGTTCAAACA +
Preference number: 5 (lower is better)
Translates to: PHYHLSQMRNTRFREIKQSSCAH*SGSVQT
Trigger: TGTTTGAACCGAACCCGACAAATGGGCGCATGACGA...TTGCTTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp AGAAAGCACTTTTTCTTAAGCACTTTTGCCTTGGGTCACATGGTTAGTGCCTCTGAAAGGAACTTGGAGTaGGGCTTTCGAGAGCCATAC +
Preference number: 5 (lower is better)
Translates to: RKHFFLSTFALGHMVSASERNLE*GFREPY
Trigger: GTATGGCTCTCGAAAGCCCAACTCCAAGTTCCTTTC...AGAGGCACTAACCATGTGACCCAAGGCAAAAGTGCTTAAGAAAAAGTGCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GCCTTGGGTCACATGGTTAGTGCCTCTACTAAGGGGATGGGTTGTCCAGTATCTGTAGCATATCTAGGCTaGTTTCCTTATCTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: ALGHMVSASTKGMGCPVSVAYLG*FPYLEN
Trigger: ATTTTCCAGATAAGGAAACAAGCCTAGATATGCTAC...AGATACTGGACAACCCATCCCCTTAGTAGAGGCACTAACCATGTGACCCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp AGTAAGTCTCCATCAGACAGTCAGCATGCCATTTATGATCCACGCAGGACCATGGGACAGATTTTGCTCTaGTTCCTCTTGATTTGGCTT +
Preference number: 5 (lower is better)
Translates to: SKSPSDSQHAIYDPRRTMGQILL*FLLIWL
Trigger: AAGCCAAATCAAGAGGAACAAGAGCAAAATCTGTCC...CATGGTCCTGCGTGGATCATAAATGGCATGCTGACTGTCTGATGGAGACTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp GAAACAAGTTTTCAGTCTCCCAAGTCTCTTCTGACTAACCAATGGTTCAAAGTCGGTGTGCTCTTGCTCTaGTCCAGACCACGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: ETSFQSPKSLLTNQWFKVGVLLL*SRPRRK
Trigger: TTTCCTACGTGGTCTGGACAAGAGCAAGAGCACACC...GACTTTGAACCATTGGTTAGTCAGAAGAGACTTGGGAGACTGAAAACTTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp AGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAATTAAGCACTTTTGCCTaGGGTCACATGGTTAGTGCC +
Preference number: 5 (lower is better)
Translates to: SPTLSPFTDEKHKVQRDQLSTFA*GHMVSA
Trigger: GGCACTAACCATGTGACCCAAGGCAAAAGTGCTTAA...TTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp AGCCCCACATTATCACCTTTCACAGATGAGAAACACAAGGTTCAGAGAGATCAAAGTGCATGTCATCCTTaGGGGAACAGTGTAAATTTG +
Preference number: 5 (lower is better)
Translates to: SPTLSPFTDEKHKVQRDQSACHP*GNSVNL
Trigger: CAAATTTACACTGTTCCCCAAAGGATGACATGCACT...TTGATCTCTCTGAACCTTGTGTTTCTCATCTGTGAAAGGTGATAATGTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS-3UTR CAA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGGAGCTTCTAGCTCATTaGCATGTCCTAATTAACCAC +
Preference number: 5 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLELLAH*HVLINH
Trigger: GTGGTTAATTAGGACATGCAAATGAGCTAGAAGCTC...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357260.6
CDS-3UTR CAA 90 bp ATCTGGGTGGCTAGTATACAGTGTACAAAAACATGTCACCTATTGTCTTCTCTGAAAACATGTCACCTATaGTCTTCTCTGACCCTTGCT +
Preference number: 5 (lower is better)
Translates to: IWVASIQCTKTCHLLSSLKTCHL*SSLTLA
Trigger: AGCAAGGGTCAGAGAAGACAATAGGTGACATGTTTT...CAGAGAAGACAATAGGTGACATGTTTTTGTACACTGTATACTAGCCACCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000534365.1
CDS GCA 72 bp GGCCTGGCAGGACCTCTGCCACCCTCCCAACAAGGGTaGTCGCACTGGGTCCTGGGACCTTCAGGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: GLAGPLPPSQQG*SHWVLGPSGLP
Trigger: AGGCAGCCCTGAAGGTCCCAGGACCCAGTGCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS GCA 72 bp TGGAGGGGGAACAGACTGTGGGCCTGGCAGGACCTCTaGCACCCTCCCAACAAGGGTGCTCGCACTGGGTCC +
Preference number: 6 (lower is better)
Translates to: WRGNRLWAWQDL*HPPNKGARTGS
Trigger: GGACCCAGTGCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS CCA 72 bp GGTTCGGGACTCAGGGACCATGGGTGTCACCCAGCCTaGCTTCTCCTTCAGCAGCCGGTCACGGTCAGGCCG +
Preference number: 6 (lower is better)
Translates to: GSGLRDHGCHPA*LLLQQPVTVRP
Trigger: CGGCCTGACCGTGACCGGCTGCTGAAGGAGAAGCCAGGCTGGGTGACACCCATGGTCCCTGAGTCCCGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS CCA 72 bp CCAGAGGCTGTCGATTCCGGCCCCGGGACATCAACGTaGAGGTCCAGTCATCCGGTTCCACTCGCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: PEAVDSGPGTST*RSSHPVPLALA
Trigger: GGCCAGAGCGAGTGGAACCGGATGACTGGACCTCCACGTTGATGTCCCGGGGCCGGAATCGACAGCCTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS TCA 72 bp ATTTGTCGGGTTCGGTTCAAACAGAGAGGGCCCGGGTaGAACCCCGGCCCCACTGGAAACTGCGCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: ICRVRFKQRGPG*NPGPTGNCAPG
Trigger: GCCCGGAGCGCAGTTTCCAGTGGGGCCGGGGTTTCACCCGGGCCCTCTCTGTTTGAACCGAACCCGACAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000527570.1
ENST00000534365.1
CDS CCA 72 bp GAGAAGGTTGACTGGAGGGGGAACAGACTGTGGGCCTaGCAGGACCTCTGCCACCCTCCCAACAAGGGTGCT +
Preference number: 6 (lower is better)
Translates to: EKVDWRGNRLWA*QDLCHPPNKGA
Trigger: AGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
ENST00000534365.1
CDS CAA 90 bp CCTGGGAAGGGGAAATGTCCAGAGCCCTTGGAAAGGCTCCGCTTCTaGACCTTCTGTGAGCGGCCGGTTCGGGACTCAGGGACCATGGGT +
Preference number: 6 (lower is better)
Translates to: PGKGKCPEPLERLRF*TFCERPVRDSGTMG
Trigger: ACCCATGGTCCCTGAGTCCCGAACCGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTTCCAAGGGCTCTGGACATTTCCCCTTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS TCA 72 bp AGAGCCCTTGGAAAGGCTCCGCTTCTTGACCTTCTGTaGGCGGCCGGTTCGGGACTCAGGGACCATGGGTGT +
Preference number: 6 (lower is better)
Translates to: RALGKAPLLDLL*AAGSGLRDHGC
Trigger: ACACCCATGGTCCCTGAGTCCCGAACCGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTTCCAAGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS CCA 72 bp TGCCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTaGGCCTGGCAGGACCTCTGCCACCCTCCCAACAAG +
Preference number: 6 (lower is better)
Translates to: CQEKVDWRGNRL*AWQDLCHPPNK
Trigger: CTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS CCA 72 bp GCTCAAGAGAAGGTTGACTGGAGGGGGAACAGACTGTaGGCCTGGCAGGACCTCTGCCACCCTCCCAACAAG +
Preference number: 6 (lower is better)
Translates to: AQEKVDWRGNRL*AWQDLCHPPNK
Trigger: CTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS TCA 72 bp GGAAATGTCCAGAGCCCTTGGAAAGGCTCCGCTTCTTaGCCTTCTGTGAGCGGCCGGTTCGGGACTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GNVQSPWKGSAS*PSVSGRFGTQG
Trigger: TCCCTGAGTCCCGAACCGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTTCCAAGGGCTCTGGACATTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS CCA 72 bp ACAGCCTCTGCTGGTGACACCCAGGCAAACAGGGTCTaGAGTGGACCTCCAGCAAACTCCAGCAGACCCAGT +
Preference number: 6 (lower is better)
Translates to: TASAGDTQANRV*SGPPANSSRPS
Trigger: ACTGGGTCTGCTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTGTCACCAGCAGAGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527570.1
CDS CCA 72 bp CCATGGTGCTGGCAGAAGTGCCTTAACTGCACCGGATaGGGAAGGCACCTGAGGTGGGTTCTGGCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: PWCWQKCLNCTG*GRHLRWVLAAQ
Trigger: TTGAGCAGCCAGAACCCACCTCAGGTGCCTTCCCCATCCGGTGCAGTTAAGGCACTTCTGCCAGCACCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534365.1
CDS CAA 90 bp GGAGATAGCAGTCCATTTCCCTGCTCTCCATCGTCATGCGCCCATTaGTCGGGTTCGGTTCAAACAGAGAGGGCCCGGGTGAAACCCCGG +
Preference number: 6 (lower is better)
Translates to: GDSSPFPCSPSSCAH*SGSVQTERARVKPR
Trigger: CCGGGGTTTCACCCGGGCCCTCTCTGTTTGAACCGAACCCGACAAATGGGCGCATGACGATGGAGAGCAGGGAAATGGACTGCTATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000527570.1
ENST00000534365.1
CDS TCA 72 bp TGGGATGGAAACTTGGTGCTGCTGCCAAGAGAAGGTTaGCTGGAGGGGGAACAGACTGTGGGCCTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: WDGNLVLLPREG*LEGEQTVGLAG
Trigger: TCCTGCCAGGCCCACAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS GCA 72 bp AGGCCGCACACTACGCAAGAACTTCTTAAAGATGTTTaGTGTCAGGGCGAACCTGCGGCCCAGCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RPHTTQELLKDV*CQGEPAAQLLG
Trigger: CCCCAGGAGCTGGGCCGCAGGTTCGCCCTGACAGCAAACATCTTTAAGAAGTTCTTGCGTAGTGTGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357260.6
ENST00000444059.2
CDS CAA 72 bp AGTCCATTTCCCTGCTCTCCATCGTCATGCGCCCATTaGTCGGGTTCGGTTCAAACAGAGAGGGCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: SPFPCSPSSCAH*SGSVQTERARV
Trigger: CACCCGGGCCCTCTCTGTTTGAACCGAACCCGACAAATGGGCGCATGACGATGGAGAGCAGGGAAATGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000527570.1
ENST00000534365.1
CDS GCA 72 bp CCCTTCCACAGACACTCCTATGGGATGGAAACTTGGTaGTGCTGCCAAGAGAAGGTTGACTGGAGGGGGAAC +
Preference number: 6 (lower is better)
Translates to: PFHRHSYGMETW*CCQEKVDWRGN
Trigger: GTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS CAA 72 bp AAGTCTAGCCAATTGCCCACCAGGTCTGCAAAAACGTaGTCCCCTAACACCAGAGGCTGTCGATTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: KSSQLPTRSAKT*SPNTRGCRFRP
Trigger: GGGCCGGAATCGACAGCCTCTGGTGTTAGGGGACAACGTTTTTGCAGACCTGGTGGGCAATTGGCTAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS GCA 72 bp CACAGACACTCCTATGGGATGGAAACTTGGTGCTGCTaGCAAGAGAAGGTTGACTGGAGGGGGAACAGACTG +
Preference number: 6 (lower is better)
Translates to: HRHSYGMETWCC*QEKVDWRGNRL
Trigger: CAGTCTGTTCCCCCTCCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS CCA 72 bp GGCAAGGGGGCTAAATCCCTTCCACAGACACTCCTATaGGATGGAAACTTGGTGCTGCTGCCAAGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: GKGAKSLPQTLL*DGNLVLLPREG
Trigger: ACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGGAAGGGATTTAGCCCCCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357260.6
ENST00000444059.2
ENST00000527621.1
CDS CCA 72 bp TCATCTGATCCTGTAAGCCATCACCCACCTCCTTCATaGACATCTGCAGGGGAGAGAGAAAGCATGGGGCCA +
Preference number: 6 (lower is better)
Translates to: SSDPVSHHPPPS*TSAGERESMGP
Trigger: TGGCCCCATGCTTTCTCTCTCCCCTGCAGATGTCCATGAAGGAGGTGGGTGATGGCTTACAGGATCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527621.1
CDS GCA 72 bp ATGAAGCTTCCAGAGGAAGGAGCAGGTAGCAATCTTTaGTGTTCTACAGCCTCTGCTGGTGACACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: MKLPEEGAGSNL*CSTASAGDTQA
Trigger: TGCCTGGGTGTCACCAGCAGAGGCTGTAGAACAGCAAAGATTGCTACCTGCTCCTTCCTCTGGAAGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527570.1